LOCUS       DAWXHA010000001        70734 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.001, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000001 DAWXHA010000000
VERSION     DAWXHA010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 70734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 70734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..70734
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.001"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(323..4492)
                     /locus_tag="AABD07_000001"
     CDS             complement(323..4492)
                     /locus_tag="AABD07_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HFB2354638.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPAPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWIAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITDISAGDIAIVTKPTPPKEERPPQGLPDSIDLPA
                     TVYLDRFETGKISMGKTFDKQTVYLERLNAAYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGFEGETIHSTARLSGSLKDVRAELTIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGTGTARTDGSLAIASDPAN
                     EQRKLVFDTVNISAGEGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQFPAGNING
                     SIHLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIVKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGTARN
                     LHIGKAADIRSLDFTLKGSPDTSRPMRADIKGGRLSLSGGAAVVDTAGLTLEGTGAQH
                     RIRTHAAMTLDGKPFKLDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AEHVAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGHNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLGIGNAFGGNMANTPLGGRITASLPDLGALKPFLPAAAQNITGSLNASAQ
                     IGGRVSSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVSMENSVPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAASLPVNMNLTLDLN
                     DGIRFSGYGADVTIGGKLTLTAQPGGNVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYGISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRLFGSD
                     KKDSAGNGKGK"
     gene            complement(4547..6373)
                     /locus_tag="AABD07_000002"
     CDS             complement(4547..6373)
                     /locus_tag="AABD07_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HFB2354639.1"
                     /translation="MIKPTSLLLPALFFFPHAYAPAADLSENKAAGFALFKSKSPDTE
                     SVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAPDNVKTML
                     RSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEYYRNALEN
                     WQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATADLNVVVDSG
                     RPIAFGDFEITGTQRYPEQTVSGLARFQPGTPYDLDLLLDFQQALEQNGHYSGASVQA
                     DFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKGYIGSVVW
                     DMDKYETTLAAGISQPRNYQGNYWTSNVSYNRSTTQNIEKRAFSGGIWYVRDRAGIDA
                     RLGAEFLAEGRKIPGSDVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDGKIGTTLG
                     TFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLMFRSGGAS
                     SVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDAAANFKRM
                     KLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6765..7994
                     /gene="sstT"
                     /locus_tag="AABD07_000003"
     CDS             6765..7994
                     /gene="sstT"
                     /locus_tag="AABD07_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HFB2354640.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8145..9425
                     /locus_tag="AABD07_000004"
     CDS             8145..9425
                     /locus_tag="AABD07_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFB2354641.1"
                     /translation="MFKRSVIAMACIFPLSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     NAGEGVLPKEKKDEEAAGGAPQADTQDATAGEGSQDMAAVSAENTGNGGAATTDNPKN
                     EDAGAQNDMPQNAAESANQTGNNQPAGSSDSAPASNPAPANGGSDFGRTNVGNSVVID
                     GPSQNITLTHCKGDPCNGDNLLDEEAPPKSEFESLSDEEKIKKYKKDGEKFTGLVAIK
                     VENNGLNKYTIIYQAQPTRSARSRRSLPAEIPLIPVNQADTLIVDGEAVSLTGHSGNI
                     FAPEGNYRYLTYGAEKLPGGSYALRVQGEPAKGEMLAGTAVYNGEVLHFHMENGRPYP
                     SGGRFAAKVDFGSKSVDGIIDSSDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVSGRF
                     YGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKDRD"
     gene            9425..9628
                     /locus_tag="AABD07_000005"
     CDS             9425..9628
                     /locus_tag="AABD07_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354642.1"
                     /translation="MLMPPEAQVFITAGRRVQIIKQAPEKGGIPKSGTEIAARIGGIP
                     QPAGETVGSSRNVGYFRPPFSGC"
     gene            9658..9936
                     /locus_tag="AABD07_000006"
     CDS             9658..9936
                     /locus_tag="AABD07_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354643.1"
                     /translation="MFRRPVFLTAVFQHSAGSNRQQQGDNALNPALRGGRVRAGLGKG
                     IAFPNRGGATGCALCAERVCGNGMPSEAGAFRRHCDVWGAGPVQIRIS"
     gene            complement(9929..10144)
                     /locus_tag="AABD07_000007"
     CDS             complement(9929..10144)
                     /locus_tag="AABD07_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354644.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVCGQYFSEKKMKDNGFIN"
     gene            complement(10137..10352)
                     /locus_tag="AABD07_000008"
     CDS             complement(10137..10352)
                     /locus_tag="AABD07_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HFB2354645.1"
                     /translation="MKEYKVVIYQESLLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(10555..11898)
                     /gene="argG"
                     /locus_tag="AABD07_000009"
     CDS             complement(10555..11898)
                     /gene="argG"
                     /locus_tag="AABD07_000009"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HFB2354646.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIEPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLSLGEGSVLPQLGNKQ"
     gene            12023..12823
                     /locus_tag="AABD07_000010"
     CDS             12023..12823
                     /locus_tag="AABD07_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HFB2354647.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDRTRQTAAAALDLPVVRHPEAAKFIEG
                     ITRKRGKPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLETYYAGRFNQTERGSRSVYVFEQPESRITPIIEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAKLKNRVN"
     gene            12863..13849
                     /locus_tag="AABD07_000011"
     CDS             12863..13849
                     /locus_tag="AABD07_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HFB2354648.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYRDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGKIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVSEALQAVR"
     gene            13898..14414
                     /locus_tag="AABD07_000012"
                     /pseudo
     CDS             13898..14414
                     /locus_tag="AABD07_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684692.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
     gene            14510..14761
                     /locus_tag="AABD07_000013"
                     /pseudo
     CDS             14510..14761
                     /locus_tag="AABD07_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            15054..15386
                     /locus_tag="AABD07_000014"
                     /pseudo
     CDS             15054..15386
                     /locus_tag="AABD07_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981114.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            15614..16234
                     /locus_tag="AABD07_000015"
     CDS             15614..16234
                     /locus_tag="AABD07_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354649.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSKGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACLNLLIAASVWLRYRKDGYGEH"
     gene            16257..17708
                     /locus_tag="AABD07_000016"
     CDS             16257..17708
                     /locus_tag="AABD07_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine synthase"
                     /protein_id="HFB2354650.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTPFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDIFNSVNGIECAYLPPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNSTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIRMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            18169..18525
                     /locus_tag="AABD07_000017"
     CDS             18169..18525
                     /locus_tag="AABD07_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HFB2354651.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            18516..18998
                     /locus_tag="AABD07_000018"
     CDS             18516..18998
                     /locus_tag="AABD07_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HFB2354652.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            19011..19604
                     /locus_tag="AABD07_000019"
     CDS             19011..19604
                     /locus_tag="AABD07_000019"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HFB2354653.1"
                     /translation="MASIQNLYETVVGVLGDQAGKVISALGEITVECLPEHYISVMTA
                     LHDHEDLHFELLVDLCGVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVADIYNSADWYEREAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            19594..20850
                     /gene="nuoD"
                     /locus_tag="AABD07_000020"
     CDS             19594..20850
                     /gene="nuoD"
                     /locus_tag="AABD07_000020"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HFB2354654.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPGFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCADWLRVNPGPVITANHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            20850..21323
                     /gene="nuoE"
                     /locus_tag="AABD07_000021"
     CDS             20850..21323
                     /gene="nuoE"
                     /locus_tag="AABD07_000021"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HFB2354655.1"
                     /translation="MLSAKSLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            21713..23014
                     /gene="nuoF"
                     /locus_tag="AABD07_000022"
     CDS             21713..23014
                     /gene="nuoF"
                     /locus_tag="AABD07_000022"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HFB2354656.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVRRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFAHYIEHGGPMKEHKWGGW"
     gene            23014..23437
                     /locus_tag="AABD07_000023"
                     /pseudo
     CDS             23014..23437
                     /locus_tag="AABD07_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            23727..25988
                     /locus_tag="AABD07_000024"
     CDS             23727..25988
                     /locus_tag="AABD07_000024"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HFB2354657.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVDVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGVWANPMNTVEELYLAKKFAD
                     GLGVKNFATRLRQQDKRLSDGLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELFMPLLSQEAAHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     AEMANTPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPLWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWAGEGVQTASNRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMGTIELAGA"
     gene            25991..27067
                     /gene="nuoH"
                     /locus_tag="AABD07_000025"
     CDS             25991..27067
                     /gene="nuoH"
                     /locus_tag="AABD07_000025"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HFB2354658.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGLRGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGIVGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            27148..27627
                     /gene="nuoI"
                     /locus_tag="AABD07_000026"
     CDS             27148..27627
                     /gene="nuoI"
                     /locus_tag="AABD07_000026"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HFB2354659.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            27639..28310
                     /locus_tag="AABD07_000027"
     CDS             27639..28310
                     /locus_tag="AABD07_000027"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HFB2354660.1"
                     /translation="MTFSVILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAM
                     IWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTTNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKTE
                     GEGKA"
     gene            28307..28612
                     /gene="nuoK"
                     /locus_tag="AABD07_000028"
     CDS             28307..28612
                     /gene="nuoK"
                     /locus_tag="AABD07_000028"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003787972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HFB2354661.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            28615..30639
                     /gene="nuoL"
                     /locus_tag="AABD07_000029"
     CDS             28615..30639
                     /gene="nuoL"
                     /locus_tag="AABD07_000029"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HFB2354662.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRTKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPGATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGEEHHGLGKNDNPHESPLVVTLPLILLAIPSVIIGYVAI
                     EPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLHSPVLYLATAGVLSAWL
                     LYIKLPHLPAKIAQAFRPVYVLFENKYYLDALYFNVFAKGTRALGNFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKVQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            30782..31780
                     /locus_tag="AABD07_000030"
                     /pseudo
     CDS             30782..31780
                     /locus_tag="AABD07_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359273.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            31753..31950
                     /locus_tag="AABD07_000031"
     CDS             31753..31950
                     /locus_tag="AABD07_000031"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C nitrite reductase"
                     /protein_id="HFB2354663.1"
                     /translation="MVRSKEDGVVYGKMIDYPSNASFVDLLNEAFGVDLNKKKIERAQ
                     ERNQEQAKKPYWNWYVRNWAD"
     gene            31961..32185
                     /locus_tag="AABD07_000032"
     CDS             31961..32185
                     /locus_tag="AABD07_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HFB2354664.1"
                     /translation="MTVYLLDTNYLVYLADDDSDEEKRKAVLSDMAEKLQQDDNRFVI
                     TPLIRYEVLRGVDWGKSEKLSRLTGVLAQF"
     gene            32216..32422
                     /locus_tag="AABD07_000033"
     CDS             32216..32422
                     /locus_tag="AABD07_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354665.1"
                     /translation="MASNLYRFDKFEAERDNTPKNLEKRKFDMFHYATASVNNLEILS
                     HDTDVNKIKDLHERMRLEDSAELA"
     gene            32532..34028
                     /locus_tag="AABD07_000034"
     CDS             32532..34028
                     /locus_tag="AABD07_000034"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HFB2354666.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLATGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLTGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AVIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVVMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFAILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            34038..35483
                     /gene="nuoN"
                     /locus_tag="AABD07_000035"
     CDS             34038..35483
                     /gene="nuoN"
                     /locus_tag="AABD07_000035"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HFB2354667.1"
                     /translation="MNWSDLNLMPALPEVALLSLLVLLLPADLWASDDKCRWTHYGAL
                     ATVAVTAAVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFVLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWMPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHTGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLVGAFYYLRVVKVMYFDESGRARPAAGGNNAAKS
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            35595..35894
                     /locus_tag="AABD07_000036"
     CDS             35595..35894
                     /locus_tag="AABD07_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HFB2354668.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHLIELA
                     AGFALTASLAYILESRAGAVHNQGWEFYATVVCLYLIFAFPCFVRRYFWHTRNRE"
     gene            complement(36011..36907)
                     /locus_tag="AABD07_000037"
     CDS             complement(36011..36907)
                     /locus_tag="AABD07_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HFB2354669.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSGNEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAARQLAMLSVLAKTGGSAGMAGGQ
                     AIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(36891..37115)
                     /locus_tag="AABD07_000038"
     CDS             complement(36891..37115)
                     /locus_tag="AABD07_000038"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HFB2354670.1"
                     /translation="MKKNTPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGTKELNLESDE"
     gene            complement(37228..38151)
                     /gene="rsgA"
                     /locus_tag="AABD07_000039"
     CDS             complement(37228..38151)
                     /gene="rsgA"
                     /locus_tag="AABD07_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HFB2354671.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITAGYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAADIRAVIVLNKADLPETALWLEKLKFYETLGYPVI
                     ETRVLENADSLRPVLQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPHYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAETGAASPERLAFLQGITDELLG"
     gene            complement(38156..40012)
                     /locus_tag="AABD07_000040"
     CDS             complement(38156..40012)
                     /locus_tag="AABD07_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFB2354672.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLCRFVWSSMDGVRKWIA
                     ALAALTAGIGIMEALIFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIIGFASVMRLLIPRLGQTAARQAN
                     ARSLMTGRITDAYSNIATVKLFFHGAREAVYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSAAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGI
                     VNDGMATLSKPHTILDKPQALPLNVPQGAIKFEHVDFCYEAGKPLLNGFNLNIKPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPDLSDAKGRSGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMEGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLSEHVEWQHD"
     gene            complement(40175..40759)
                     /gene="ruvA"
                     /locus_tag="AABD07_000041"
     CDS             complement(40175..40759)
                     /gene="ruvA"
                     /locus_tag="AABD07_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HFB2354673.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDRLFAASPAADETEDIVSTLLA
                     LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            complement(40841..41167)
                     /locus_tag="AABD07_000042"
     CDS             complement(40841..41167)
                     /locus_tag="AABD07_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFB2354674.1"
                     /translation="MNIKHLLLTAAATALLGISAPALAHHDGHGDDDHGHAAHQHGKQ
                     DKIISRAQAEKAAWARVGGKITDIDLEHDDGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(41228..41914)
                     /locus_tag="AABD07_000043"
     CDS             complement(41228..41914)
                     /locus_tag="AABD07_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HFB2354675.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AEFTQTGNASWYGGRFHGRKTSGGDRYDMNAFTAAHKTLPIPSHVRVTNTKNGKSVIV
                     RVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSAPVAENKDIFIDLK
                     SFGTEHEAQAYLNQAAQNFAASSSSPNLSVEKRRYEYVVKMGPFASQERAAEAEAQAR
                     GMVRAVLTSG"
     gene            complement(42042..42506)
                     /gene="trmL"
                     /locus_tag="AABD07_000044"
     CDS             complement(42042..42506)
                     /gene="trmL"
                     /locus_tag="AABD07_000044"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HFB2354676.1"
                     /translation="MLTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKSLAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMRPGSRSMNLSNTVSVILFEAWRQHGYAGGV"
     gene            complement(42571..43179)
                     /locus_tag="AABD07_000045"
     CDS             complement(42571..43179)
                     /locus_tag="AABD07_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFB2354677.1"
                     /translation="MASFRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRMWASLHY
                     EPPVSNMIRALKHLADLGMAQPLADLTMQNPPDRLSDECFDFVLPVPLSRERLLQRGF
                     NQSESIVGLLAQRYGWQILPRHTVFRHHRPPQSTLKGGERRRNIKNAFEIRTPIPENC
                     NILLIDDVFTTGATLDELAKTLKKSGANRICCWTLARTPMKK"
     gene            43163..44044
                     /gene="bioH"
                     /locus_tag="AABD07_000046"
     CDS             43163..44044
                     /gene="bioH"
                     /locus_tag="AABD07_000046"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HFB2354678.1"
                     /translation="MRKLAKSVLQPAQMPSETPDEPWHNTQRLIVGASAMRRQQERKF
                     MPDAAKKVYLIHGWGANRHAFDDLMPRLPATWPVSAVDLPGHGDAPFAQPFDIEAAAD
                     GIAAQIDTSADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTAAEDYPEGLAAP
                     ALGKMVGAFRTDYAKHIKQFLQLQLLHTPDAAEIIGRILPDLARCGTPQALQEALDAA
                     ERADVRHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRLVVMEKAAHAPFLSH
                     AEVFAALYRDFVEGGLT"
     gene            44041..44829
                     /locus_tag="AABD07_000047"
     CDS             44041..44829
                     /locus_tag="AABD07_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFB2354679.1"
                     /translation="MNPQDKCWQVHRHLAEHTDQRLTLVRNAPGHILLAGADADISRS
                     LLAKRYPLAVFEEYDSRADFLAAAAAARKGGFWQKLTGRGVVQHCQSPTVPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTLAELKSRLKENGIESRSV
                     MFPDMHDLADMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAVAWDDENAA
                     RSCAGAIFEREGGLGITLETVYGHAVKKLVLPQGENVVRFFPKR"
     gene            45061..46512
                     /locus_tag="AABD07_000048"
     CDS             45061..46512
                     /locus_tag="AABD07_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HFB2354680.1"
                     /translation="MKQYTACQVTRVEEHGGKKTHATLLALDWRGNKPLGAAELADLK
                     PLYKDFMYWERGLHMYKASAVVPTGYVRVGNTAPLCGEDTQRYASFWGDGYDVYRQLR
                     WRQIPEKQRKAFKKAAKSKNTVMFAGREYGISKQNLSDVWDDFEDAMELKAFPCLSSL
                     FLTKWHKNLYEYLEEYPFITRLCLENHGQTVLDFSNTRITDLSVDMTGVESLYLNEGL
                     DSLNLKGEIKENCKVCTAGKGAGLILEVGKSVPKVRGLENLTAVNVMGIADFDMQNLS
                     ETYPKLKTIRLWGKPGNIANFSAVSGFEDLEVFTAVDLFGFGADDIPHPDRLPKLHRL
                     WMSSLPEEAAKAVKKLYKKRKEDGLDLWIEKARKPEWLAQNFDNPFRDWDGAEHIPKS
                     HAKKAAELYRKTRAGVVKLLGNPPENTGEGLAEAVKAYTGGFNKMDKKHFIDTVERED
                     IAEALETILDLIPDGSCADKEKLFEIFDKNRNF"
     gene            complement(46549..48852)
                     /gene="recQ"
                     /locus_tag="AABD07_000049"
     CDS             complement(46549..48852)
                     /gene="recQ"
                     /locus_tag="AABD07_000049"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HFB2354681.1"
                     /translation="MTHRPTARQILHEVFGYPEFRGRQEDVINTLAGGGSLTVLMPTG
                     GGKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSGTSADEAREIA
                     DKLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSRWGHDFRPEYQQLG
                     MLAERYPNIPRIALTATADAATRADIKHYLHLDDASEFVSSFDRTNIYYQVIEKNNGK
                     KQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLNAIPYHAGLSMDVREENQRR
                     FTHEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLC
                     YGLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEASEPC
                     GHCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQL
                     STFGIGAELSDKEWRSVIRQCISLGYLTVNIARYQALQLTEAAKKVLKGETEVMLRPL
                     KRDKPATRTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKM
                     PQNLNGLHDIYGLGEAKTERFGHGILKVCQNAADFSHDAVIRPQTEREQQLRQKLEAW
                     RYEQARAENCALHTVLSDESLADMLAATPETETDLEAVHGLGSVRAAKYGRDILAVCR
                     PFSDGIDETAKHKRCLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAEL
                     AAVYGVGEEKAARYGAAVLAVLERDAV"
     gene            complement(48915..49697)
                     /gene="trpC"
                     /locus_tag="AABD07_000050"
     CDS             complement(48915..49697)
                     /gene="trpC"
                     /locus_tag="AABD07_000050"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HFB2354682.1"
                     /translation="MTDILNKILATKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVLLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQGQLERFEALA
                     HELGMTVLLELHDETELEKCRNLTTPLRGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMRARGVHTFLIGETFMRADDIGAEVGKLF"
     gene            complement(49748..50704)
                     /locus_tag="AABD07_000051"
     CDS             complement(49748..50704)
                     /locus_tag="AABD07_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HFB2354683.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQHPAPAYRREMLPDSTGKT
                     KTAYDFSGGISPDAPLVVLFHGLEGSSRSHYAAELMLAVRNRGWHGAVVHFRSCGGVA
                     NTAPVFYHLGDTAEIAFALDTLTARYREIYAVGVSLGGNAPAKYLGEQGKKALPHASA
                     AVSAPVDAEAAGSRFDSGITRLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDPFLPPEALPRADEVSEAV
                     TLFQPAHGGHAGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            complement(50837..52375)
                     /gene="murJ"
                     /locus_tag="AABD07_000052"
     CDS             complement(50837..52375)
                     /gene="murJ"
                     /locus_tag="AABD07_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HFB2354684.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLIVVTALG
                     ILAAPWVIYVSAPGFTKDADKFQLSISLLRITFPYILLISLSSFVGSILNSYHKFGIP
                     AFTPTFLNISFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMVPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAAGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLASGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHAGLSLAIGLGACINAGLLFFLLRKHGIYRPGRGWAAFLAKMLL
                     ALAVMCGGLWAAQACLPFEWAHAGGMRKAGQLCILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            52813..53511
                     /locus_tag="AABD07_000053"
     CDS             52813..53511
                     /locus_tag="AABD07_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFB2354685.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCARLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(53568..54572)
                     /locus_tag="AABD07_000054"
     CDS             complement(53568..54572)
                     /locus_tag="AABD07_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HFB2354686.1"
                     /translation="MQRQTELKNWLQTVYPERDFDLSFAAADADFRRYFRAAFSDGGS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGEAAHKALLLEAIGELVGLQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTADTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPAEFDEFYRRFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            54642..57047
                     /locus_tag="AABD07_000055"
     CDS             54642..57047
                     /locus_tag="AABD07_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HFB2354687.1"
                     /translation="MARLFSLKPLVLALGFCFGTHCAADTVAAEEADGRVAEGGAQGA
                     SESAQASDLTLGSTCLFCSNESGSPERTEAAVQGSGEASVPEDYTRIVADRMEGQSQV
                     KVRAEGSVIIERDGAVLNTDWADYDQSGDTVTVGDRFALQQDGTLIRGETLTYNLDQQ
                     TGEAHNVRMETEQGGRRLQSVSRTAEMLGEGRYKLTETQFNTCSAGDAGWYVKAASVE
                     ADRGKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSVSAGSDGVSLSVPY
                     YFNLAPNFDATFAPGIIGERGATFDGQIRYLRPDYSGQTDLTWLPHDKKSGRNNRYQA
                     KWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGGEEIAGNVNLNRRVWLDYGGRAAGGS
                     LNAGLSVQKYQTLANQSGYKDEPYAIMPRLSADWHKNAGRAQIGVSAQFTRFSHDGRQ
                     DGSRLVVYPGIKWDFSNSWGYVRPKLGLHATYYSLDSFGGKASRSVGRVLPVVNIDGG
                     TTFERNTRLFGGGVVQTIEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYYG
                     NDRINAANSLSTAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKNPRSRSD
                     WVAFASGGIGGRFTLDSSIHYNQNDKRAEHYAVGAGYRPAPGKVLNARYKYGRNEKIY
                     LQADGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEMLAGAEYKSSCGCW
                     GAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPAGRMDVAVPGYIPAHSLSAGRN
                     KRP"
     gene            57149..58150
                     /locus_tag="AABD07_000056"
     CDS             57149..58150
                     /locus_tag="AABD07_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFB2354688.1"
                     /translation="MMKIKALMIAAALLAAADVHAAPQKAKTAPAKAVKAAATAQKEA
                     APAQQQGGIRFSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQ
                     LVNQSLIVQAGKRRNIQASEAEIDAVVAQNPALKNLSPTQRRELADNIIAEKVRQQAV
                     MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK
                     IYDQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPV
                     RTQFGWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDIR"
     gene            complement(58628..60508)
                     /locus_tag="AABD07_000057"
     CDS             complement(58628..60508)
                     /locus_tag="AABD07_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HFB2354689.1"
                     /translation="MNIFYEESGQFKVAVVVQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPVYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLRTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLSLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPS
                     LAVRQGGGMEQIIMQRLSTVYFPGGKITMLPENWITAFSLDAGAYRPAVSIYFDVDGE
                     FNVGEPTCKIEAVNIAANLRIQAIEPHFNAETGLDQAGEMMFAHHQDLIWFYQFATAL
                     QKARGKYEPDRAPQYDYSIELDEEGNVSVVRRERGSPIDTLVSEMMILANSTWAQMLD
                     ENGLPGLFRVQPAGKVRMSTQSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQKSDAALFAALRDFDTAYAAYADFQRQMEAYWSLVYLQQQGISELTATILKE
                     DLVRIEGLPLTTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAAAPGGKTAGN
                     AV"
     gene            60664..61296
                     /locus_tag="AABD07_000058"
     CDS             60664..61296
                     /locus_tag="AABD07_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HFB2354690.1"
                     /translation="MENVNRVPEQARYDAERRQADEALADVFPAVSIFGSARTPQNHT
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIALPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPVVLVG
                     KAFWSGLAEWINAQLLARGMISEGAASLFSISDDEDEIIAYLSEHGLQTA"
     gene            61368..62738
                     /gene="purB"
                     /locus_tag="AABD07_000059"
     CDS             61368..62738
                     /gene="purB"
                     /locus_tag="AABD07_000059"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HFB2354691.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAAPEIAEVPPFSAETLAEIDKVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEARETVILPKLAEIIGKLTDMAHEL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKILQAQEFLGKINGAVGNYNAHMA
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFSRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLAEKLPVSRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDVTWELLAEPIQTV
                     MRRYGVANPYEKLKDLTHGKDGITPEVLKLFIESLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            62818..64686
                     /locus_tag="AABD07_000060"
                     /pseudo
     CDS             62818..64686
                     /locus_tag="AABD07_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
     gene            complement(64822..65436)
                     /locus_tag="AABD07_000061"
     CDS             complement(64822..65436)
                     /locus_tag="AABD07_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HFB2354692.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSGSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGKTEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIAAAVGNDEALAA
                     ETYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGI"
     gene            complement(65472..67622)
                     /gene="dinG"
                     /locus_tag="AABD07_000062"
     CDS             complement(65472..67622)
                     /gene="dinG"
                     /locus_tag="AABD07_000062"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HFB2354693.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPDFRPRASQREMIAAVANAFSRT
                     LTREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDAWPEKIDDAIWLKVTNDRHGCLKAACPNRP
                     ECPFYLARDMLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSMGLSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALIDRLTGEFGLFIARIEQISAVWDLLSTVSIEGEEPLAKWIARRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGSFNLILRQTGLLWLPETTT
                     LALKSPFDFEKQGELYIPSIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALHLPGDYLPLLLVQGELPKAVLLQKHHQAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            complement(67803..69101)
                     /locus_tag="AABD07_000063"
     CDS             complement(67803..69101)
                     /locus_tag="AABD07_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HFB2354694.1"
                     /translation="MPSETALPLYADTRAAHTLVWFRQNLRIRDNAALCAAVAEGSPV
                     IGICIDDAETDNPRRAAFYRQSAAELAQGLARRGIPLYTAASPAGLVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRSVFGKTDLTPDNGTAHTDFNRYRE
                     VWLDRFSKQPPAGSDLFAAYRQPFPENLPAPPPAALSDGIFLPQNGGETAAWRQWRRF
                     LEQAASYSVLKDFPSRKNTSLMGAYLSVGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHADDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWRLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPARPVAGV"
     gene            complement(69091..70002)
                     /locus_tag="AABD07_000064"
     CDS             complement(69091..70002)
                     /locus_tag="AABD07_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFB2354695.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHHNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVALELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGPLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            70110..70508
                     /locus_tag="AABD07_000065"
     CDS             70110..70508
                     /locus_tag="AABD07_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFB2354696.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            70557..>70734
                     /locus_tag="AABD07_000066"
     CDS             70557..>70734
                     /locus_tag="AABD07_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFB2354697.1"
                     /translation="MSRQSLQQAAESRRSVYSLNKNLPVGKDEIVQIVEHAVLHTPFS
                     FNSQSARVVVLFGEE"
BASE COUNT        15224 a        18409 c        20344 g        16757 t
ORIGIN      
        1 tttcttaacc atcccttcca atagccgtgc gaaggttttt ttatatcagt gggaaatgca
       61 atattctatt gtttttattg tagaatttta aaaacagatt gttgtgttcc gcgtttttgc
      121 cggtttggaa gcggtggggc gcatcagcct tttataaagg catatcggaa gcctgtataa
      181 ggtttttgaa catatcgatc ctgttccctt gcaggcggac ggcagcggcg gatggcgaaa
      241 ggcgggtttt caaatgtccg gtttggcggc gcgtctttca gacggcatgg cggcggagcg
      301 tgccgcgccg tctgaaaacc gtttatttcc ctttgccgtt tccggcggag tcttttttgt
      361 ccgaaccgaa gaggcggtcg aaacgtatgg tgtatgtcag ctcgccgccc gacgaacggc
      421 tgccgatacg ggcaaccgcc tgtatggcgc gggtcagccg gtaaatcagt ttgacggact
      481 gttccgcgct ggagatgccg tattcgtagc cgatgtagag tttgccggtc agttgtttgc
      541 cgacggtcag cacctgttcg gcggggttga gttcgccggt ttgcgcgttg cggctgcgct
      601 tgctggtaaa gcccaaatca tccaccagcc cgatgcggtc gttgatttgc ccggcaagca
      661 gcgcgcctgc ggctgcggac agggcggcat tgtcgccgct gctgccgctg ccggcgcggt
      721 tgaggatgag ccaggagagc ttgtcttttt cactcatcgg ttcgtttgcc gtcagcgtaa
      781 tgcgcgggct gttgaggctg cccaatattt ccacgcccgc accgacgggg gaaaggcggc
      841 gttcggcgcg gatgttgagg ttggggtcgt tgagcgggcc gacaaaggag actgtgcctt
      901 tggtaatgtc taaatcctgc ccgtatgctt tgtaacgccc tttgatgacg cggaccgtgc
      961 ccaccccacg cacatttccg cccggttgcg cggtcagggt cagtttgccg cctatggtaa
     1021 cgtccgcgcc gtagccggag aagcggatgc cgtcattgag gtctaaagtc aggttcatat
     1081 tgacggggag cgatgccgcc gcctctttct tgacttcgcc caatacgacg acatcgtcgc
     1141 cgacggacgg catcgaggat ttttgcgaac cgaacagccc ctgatcagtt ttaatcatac
     1201 cggtaacgga tatgcctttt tgcggcgaat agcgcaggcg ggtgttgccg gaaaccgtca
     1261 ggcggcggtt ggggcgggac aggatgcggt atttgtcgaa caccgcgccg atatcgacat
     1321 cgggcacgct gttttccatg ctgaccgtgc cggagagttc cgccgtccct tcgtgccgga
     1381 atttcaggct gtcgattacc catttcctgc ctgcaatatg cgaacgcagc gagccgttgt
     1441 ccaagatgat gccttgggtt tggttgcggt aatagagctt gtcgccgttg atactgccgc
     1501 ccaagtgcgg gtcggcgatg ctgccgccga gggttacggc ggcattcagg ctgcctttga
     1561 cggtttgtcc gaccggtagg aagttgcgga atacttcggc atcggcaacg gtcaggttga
     1621 gcctgccgcc caaaggtgcg gtatcgaagg agcggctttg cccgacggtg atattgccgt
     1681 tgattttccc gtagttgctg ctaccgttga cggcggcatt gacggacgga gagcttaccc
     1741 gtccgccgat ttgcgcggag gcattcaggc tgccggtaat gttttgcgcg gcggcgggca
     1801 gaaagggctt caatgcgccc aagtcgggaa gggaggctgt aatcctgccg ccgagcggtg
     1861 tatttgccat attgccgccg aaggcgttgc cgatgcccaa atcggcgtta atccgtccga
     1921 aacgcgcgcc gccgtcaagc aggattccga tgcggtcgtt ttgaaagcgc gttttcaggg
     1981 aaaatgcgtt caaacccaaa gcctgcccgc cgggcaatac ggcatcgccg ctttgccggc
     2041 tgatattgag gtagccgcgc gcgttgtgcc cgtaggcgac atcccagtcg ccgtttaaaa
     2101 ccagattgtg ttcgaagggc ggtttgaaga aattgtgcaa ctcggcgatg tgcaggccgc
     2161 gtgcgccgcc ttttgccgat atgccggttt tcctgtccca agaaaagtgt tgcaggttga
     2221 ggctgccgcc cattgcctgc caatttgccg cacttgccgc cacgtgttcc gcaccggctt
     2281 cgagcgtcat acggttttgc agcttgaggt tgaatgcgcc gccgatgtcg aggatgccga
     2341 tgctgccttt ccatcgggta agttccctgt tgatgccgcc tgaagcgtcc aaatcgagtt
     2401 tgaacggttt gccgtccagc gtcatggcgg cgtgtgtgcg gatgcggtgc tgcgcgcccg
     2461 taccttccag cgtcaggccg gcggtatcga caaccgccgc gccgcccgac agggaaaggc
     2521 ggccgccctt gatatcggcg cgcatcgggc ggcttgtgtc gggcgagcct ttgagggtaa
     2581 aatcgagcga acggatgtct gccgctttgc cgatgtgtaa gttgcgcgcc gtgccggaaa
     2641 ggtcggtttc aaaggttcgg atgccgccgt ccaaatcgcc ggaaaggtgt ccgcgtacat
     2701 ttaaagaccc cgcgagtccg aaaccgaaac gggataaatc gggtgcggtg atattgaggt
     2761 taagccggtc gccttttttg ccgaagccgc cgtctgtttt gacgatgttc cgccccaacc
     2821 gcaaatcgac ggcggcacgc ggaaggtggc gggactcgta aacaatgtcg gcactgccgg
     2881 caatcggcac gccgttgaac gtaccgggca aaaaacgcat tttgcccgta aatttctctt
     2941 ttgccagttc accggcaaga tgaatcgaac cgttgatatt gcctgccgga aattgcggat
     3001 cgatgcgtga agggtcgaat gcgcgggaac ggatgtccag cttgagcagg cggtctttaa
     3061 acagctcgag atagccttgc gcggtcaggc tgccttcccc ggcggagatg ttgacggtgt
     3121 cgaacaccag tttccgctgt tcgtttgcgg ggtcgcttgc gatggcgagg ctgccgtccg
     3181 tgcgtgccgt gccggtgccg agttgccaag agattttggg cgaggcggtc gtgccgccga
     3241 tgccgatgct gccgtccaac ctgcctttga acgcggtttg cagcacgtct tccgcgccga
     3301 cggagttgat gcctatattt aaatcaagga tgtctttttc ggtgtcgatt ttgcccgaca
     3361 gcctgatgcc gccccgtccg agcagggcgg cggacgtatt gccgatatgc accgtgccgt
     3421 cctgccggat gacaaagccg cccaaaacct gacggacggg gatgccgttg cggtcggcaa
     3481 agccggcttt ggtgttttcc aaatcgagcg agccttccag cgcgatgccg tctgaaaacg
     3541 acgggatggc ggtcaggtcg aaattcagcc cggcatcggg cagggaaggc acgaaggcgg
     3601 acggattgat gttgaatcct ttgaccagta cttcttccaa tgttttatcc aatgattcgg
     3661 caaacgggtg gatgacggat tttcccgaga ggcggatatt gccgccgtcg atcgtcagtt
     3721 cggcgcgcac atccttcagg ctgccgctca gccgcgccgt actgtgtatg gtttcgcctt
     3781 cgaatccgcc tttggtgtaa atggcggtat cgagggcaaa cggttttttc aagccgaccg
     3841 aggctgaccc cgacgaactg ctccacggcg tgtcggcggc cttcaggtcg aggcggtgcc
     3901 ctttacggtc gtaacggtat gccgcgttga ggcgttcgag atagacagtt tgtttgtcaa
     3961 aggttttgcc catgctgatt ttgcccgtct cgaagcggtc gagatagacg gtggcgggca
     4021 ggtctatgct gtcgggcagg ccttgaggcg ggcgttcttc tttaggcgga gtcggtttgg
     4081 ttacgatggc gatgtcgccg gcggagatgt cggtgatgtg caggctgcgg cgcatcagtt
     4141 cggacggttt ccacgcgaag cggaagcggc tgattttaag gtctgccccc tcggtttcta
     4201 tcgaccagtt gtcgccgtcg aagccgtcga gcagtgtgcc tttgaggttt tgggaggaaa
     4261 tgtttacgcc gaaccaggac gggatttggt acagcccgaa gcgcaaacct gcttccgtac
     4321 cggcgatcca gccgaggaaa catactgcca aaatcaggac agacagcagt gccgccgaca
     4381 gcttcagcag cgggcggcgt ttttttgccg gcggggcggg gcggtgttca gacggcattt
     4441 tgcgcgtgcc gttttcggtc ggatcggtat ctgtcggtgc ggtatcggtc ataatgtctg
     4501 tttcaaaatg gtttgctgca atgccgtctg aagcggccgt atcggtttag aaacgcgttc
     4561 ccaagctgat gtgccagcgg atttttttgt cgctgtgtcc gtaggcgatg tcgaaggaaa
     4621 acggcgcgag cgggctgaac cagcgcacgc ccagtcccga accgtgtttc agcttcatac
     4681 gtttgaaatt ggcggcggca tcgcccatat cgtggaatac cgcgccggac agggtgcgcg
     4741 taaacggcag ttggtattcc aagctgccca ccaagagggc gcgttcgggc aggaccgatc
     4801 cgttcggacc ggcaagcccg atgctgtcaa gttcgtaacc gcgcacggaa gacgcgccgc
     4861 cgctgcggaa catcagcccc gaggggacat cggcattgtc gcgtgcaacg gtgtaacccg
     4921 cttgtccgcg tatgatgaac gtgccgagtt ttttgttttc gggcgtgaag aaataacctg
     4981 cgcgggcaga ggtgcggatt agcgcggtgg aggacaggaa tgtgcccaaa gtcgtcccga
     5041 ttttgccgtc gaggtaatgg ccgttttcgg ggtgcagcac gttgttgagc agctggcgtt
     5101 tccaagaggc ggtcagcatc gtggcgtggc tgttgcccaa atcgacatcc gagccgggga
     5161 ttttccggcc ttctgcgaga aattccgccc ccagcctggc atcgatgccc gcgcggtcgc
     5221 gcacatacca gatgccgccg gagaaggcgc gtttttcaat gttttgggtg gtcgaacggt
     5281 tgtaggaaac gttgcttgtc cagtagttgc cctgatagtt gcgcggctgg ctgatgccgg
     5341 cggcaagcgt ggtttcgtat ttgtccatat cccagacgac cgagccgata tagcctttgt
     5401 tgaagaggtt gtaatagtcg taggcgattt tgccgcccaa accgtattcc gaatcgaggc
     5461 ggatgccggt ttcgagtttg tggcgtttga cctcggttac gctgactttg acggggacgc
     5521 ggtcgccttg gaggcggtcg aagtcggctt gtacggacgc gccggaataa tgtccgtttt
     5581 gttcgagcgc ctgttggaag tcgagcagca ggtcgaggtc gtagggcgtg cccggttgga
     5641 agcgcgccag gccggagacg gtttgttcgg ggtaacgctg tgtgccggtg atttcaaagt
     5701 cgccgaaggc gatggggcgg ccgctgtcca cgacgacgtt caaatcggcg gtggcggtat
     5761 cggggttgac ggccgcccgg gtgttgccga gcttggcaag cgggtagcct ttgcgcgtta
     5821 ccgcgccgag gacggaagtt ttgctgtttt cccaactgtc ctgatcgaaa tcgctgccta
     5881 ccggctgctg ccagttttcc agcgcgttgc ggtagtattc ggcgaggttg ccgtctgaaa
     5941 ggatgtcgcc gaggatggcg acgccgacgt tggcgatttt ggtgcgcggg cccggtgtga
     6001 tgtgcaccgt ataagctccg tctttttccg tcaggctgac cttgctgctg aaatagcctt
     6061 tgctgcggag cattgtttta acgttgtccg gtgcttcttc ggcaaggaat cccgtctgtt
     6121 ccttatccaa aacctcttcc tgctgctgcg tgatgagcgg caggtgttct tcgaccatat
     6181 ctttgatttc actgtcctgc gtgtcgatgc ggacggggaa tttgggtttt aatttgactg
     6241 attcggtgtc ggggcttttg cttttgaaca atgcgaaacc cgccgccttg ttttcggaaa
     6301 ggtcggcggc aggcgcgtat gcgtgcggaa agaaaaataa agccggcagg agcagggagg
     6361 tcggtttgat catcatggta cgggtgtcgt gcatcggtgt ggcggatttc gattctaaca
     6421 ctgttcggac ggggcgggac gcttcagacg gcataccgcc gccggtattt cggaggttgc
     6481 ggcccgccgg aaatgtatct gcttgtttta aggcattttg tttccaatcc gcatatggaa
     6541 aacaggctgc gtttcggaat agtgtcgaaa aataggcagg attaaataaa tttattctcg
     6601 ttcaataaat taaactgttg cgccgaatga taaaacaaag cctgtccctg catagggcaa
     6661 atcaacgcac ctcaaaacac agcttgaaaa ataaaaaaac acagagaatg agttttcttt
     6721 taaaatacaa cattttttaa catatcacaa cataaggaag aattatggcg ttcggcaaat
     6781 ccttatttca tgcgatcggc cgcgtcagcc tggtcaggca gattgccgcc ggtttggcgt
     6841 tgggcatcgt aatcggttcg gtttcaccgc aactgggctt ggcggcaggc ttgttcggca
     6901 gcctgtttgt cggcgcgctc aaagcggtcg cgccggtttt ggtatttatt ttggtggcgg
     6961 ccacaatcgc gcagcaccaa aaaggcaaca aggcgcatat caggccgatt atcgtccttt
     7021 acctcatcgg cacgttttcc gcagccctga ccgccgtcat cgccggtatg gttttcccga
     7081 cgcacattgt tttggcgggc gcgggcgatg tgtccgccgc gccgccttcc ggcattgtgg
     7141 aagtgttgaa atcgctgctg atgaacctgg tcgccaaccc gattaacgcg attgccaatg
     7201 ccaactatat cggcattttg gcttgggctt tggttttggg cgcggcgttg cggaatcacg
     7261 gttcggacgt tacgcggcag gtcgttgccg atttggcgga agcggtttcc accgtcgtga
     7321 aatggattat ccgttttgcc cctttgggta ttttcgggct ggtgtcgtcc acaatcgcgg
     7381 agacgggttt cggcgcgctg gcgggttatg cgaagctgct tgcggtgctg ttgggctgta
     7441 tggcgtttat cgcgctggcg gtcaatcccg ccatcgtgtg gtggaaaatc cgccgcaacc
     7501 cttatccgct ggtgtttacc tgcctgcgcg aaagcggcgt gtatgccttc tttacccgtt
     7561 cttccgccgc caatatcccc gtgaatatgg ctttggcgaa aaagctgggg ctgcacgaag
     7621 acacttattc gatttccatc ccgttggggg cgaccgtcaa tatgggcggc gcggcgatta
     7681 cgattaccgt tttggctatg gcggcggcgc acacccaagg catacaggtt gattttgcca
     7741 ccgcgctgct gttgagcctg gtggcgacgg tcagcgcgtg cggcgcgtcc ggcgtggccg
     7801 gcggttcgct gctgctgatt ccgctggcgt gcagcctgtt cggcatcagc aacgatgtcg
     7861 ccatgcaggt ggtcgccgtc ggcttcatca tcggcgtgat tcaggattcg gcggaaacgg
     7921 cgttgaattc ttcaaccgac gttttgttta ccgctgccgc cgatttgggc cgacagagaa
     7981 accgtgcgga ataaaccaag ctatgccgtc tgaagcccgt ttggcgttca gacggcatat
     8041 ttttacaatt ttatgggcat atggcggaaa caataccggc tgccttgaat atgtttcaac
     8101 acacaggtcg atacataaag cgtcgcccta tgaaggagat gatgatgttt aaacgcagtg
     8161 tgattgcaat ggcttgtatt tttccccttt cagcctgtgg gggcggcggt ggcggatcgc
     8221 ccgatgtcaa gtcggcggac acgccgtcaa aaccggccgc ccccgttgtt gctgaaaatg
     8281 ccggggaagg ggtgctgccg aaagaaaaga aagatgagga ggcagcgggc ggtgcgccgc
     8341 aagccgatac gcaggacgca accgccggag aaggcagcca agatatggcg gcagtttcgg
     8401 cagaaaatac aggcaatggc ggtgcggcaa caacggacaa ccccaaaaat gaagacgcgg
     8461 gggcgcaaaa tgatatgccg caaaatgccg ccgaatccgc aaatcaaaca gggaacaacc
     8521 aacccgccgg ttcttcagat tccgcccccg cgtcaaaccc tgcccctgcg aatggcggta
     8581 gcgattttgg aaggacgaac gtgggcaatt ctgttgtgat tgacggaccg tcgcaaaata
     8641 taacgttgac ccactgtaaa ggcgatcctt gtaatggtga taatttattg gatgaagaag
     8701 caccgccaaa atcagaattt gaatcgttaa gtgatgaaga gaaaattaag aaatataaaa
     8761 aagatggaga aaagtttact ggtttggttg ctataaaagt tgaaaataat gggttgaata
     8821 aatataccat tatttatcaa gctcagccta ctcgttctgc acggtcgagg aggtcgcttc
     8881 cggccgagat tccgctgatt cccgtcaatc aggccgatac gctgattgtg gatggggaag
     8941 cggtcagcct gacggggcat tccggcaata tcttcgcgcc cgaagggaat taccggtatc
     9001 tgacttacgg ggcggaaaaa ttgcccggcg gatcgtatgc cctccgtgtg caaggcgaac
     9061 cggcaaaagg cgaaatgctt gcgggcacgg ccgtgtacaa cggcgaagtg ctgcatttcc
     9121 atatggaaaa cggccgtccg tacccgtccg gaggcaggtt tgccgcaaaa gtcgatttcg
     9181 gcagcaaatc tgtggacggc attatcgaca gcagcgatga tttgcatatg ggtacgcaaa
     9241 aattcaaagc cgccatcgat ggaaacggct ttaaggggac ttggacggaa aatggcggcg
     9301 gggatgtttc cggaaggttt tacggcccgg ccggcgagga agtggcggga aaatacagct
     9361 atcgcccgac agatgctgaa aagggcggat tcggcgtgtt tgccggcaaa aaagatcggg
     9421 attgatgttg atgccgcccg aagcgcaggt attcattacg gcgggacgac gcgttcaaat
     9481 catcaaacaa gcccccgaaa aaggcggcat cccaaaatcc ggcactgaaa ttgccgcgcg
     9541 tatcggcggc attccgcagc ctgccgggga aaccgtcggc agcagccgga atgtcgggta
     9601 tttccgcccg cctttttcgg gctgttgaaa tatgaaaata aagcataggc cgtctgaatg
     9661 ttcagacggc ctgttttttt aacggctgtg tttcaacact ccgccggttc caaccggcag
     9721 cagcagggag ataatgcctt gaaccccgct cttcggggcg gcagggttcg ggccggtttg
     9781 gggaaaggca tcgcctttcc gaatcggggc ggtgcaacgg ggtgcgcctt atgtgccgaa
     9841 agggtttgcg gcaacggtat gccgtctgaa gcgggtgcgt tcagacggca ttgtgatgtt
     9901 tggggcgcgg gtccggttca aatccgcatc agttgataaa cccgttgtct ttcattttct
     9961 tttcagaaaa atactggccg cataccagca gggcggcgag gatgatgaca aacagccctg
    10021 ccatagtcag tgtgattttg aagaacaatt cggcttcgag aaaagaaaac caaagttgca
    10081 caatcagcag cagcacccag ccggcaaaca gtccgagaca ggcataaacg ccgagcttaa
    10141 acacggtccc gctccaaaat gacgacgtag gcttcgcgtt tgaaaaacag cagcatacgg
    10201 cgcaaatctt tttccatcgt tacgacccgc cagccttcgg gggtttgttt gttgaggaac
    10261 gcgctgaaat tgacggggtt gacctttgcc gcgccgaaaa acaggctgga caacaggctt
    10321 tcctgataaa tgacgacttt gtattctttc atcgtatttc cttttcggtt gaaaccccgc
    10381 cctttggggc ggtaggatca gactttattt gggagggaac cccttccaaa tcaggacgat
    10441 acataggtcg gtgctttatg tatcgtcctg tgtgttgaaa cataggattc ctttaatcaa
    10501 gggattgcct tttcaggcaa tcccttaaat tgcagcgatg caatgcggcg aaatttattg
    10561 cttattgccc aactgcggca ataccgagcc ttcgcccagc gagagcaaac cgctttgcga
    10621 ataaataccc agtttggcgc gggtgtcggt gatgtcgagg ttgcgcatcg tgagctgtcc
    10681 gatgcggtcg agcggtgtga acgccgcacc ttcgactttt tccatactca ggcgttcggg
    10741 ttggtaggtc aggttgggcg attcggtgtt cagaatcgag tagtcgttgc cgcgccgcag
    10801 ttcgagggta acttcgccgg taacggcttt ggcgacccag cgttgggcgg tttcgcgcaa
    10861 catcaaggct tggctgtcga accagcggcc ttggtagagc aaacgtccga ggcgcaggcc
    10921 gttgatgcgg tattgttcga tggtgtcttc gttgtggatg ccggtaacca agcgttcgta
    10981 ggcgatgtgg aacaatgcca tgcccggggc ttcgtagatg ccgcgcgatt tggcttcgat
    11041 gatgcggttt tcgatttggt cgctcatacc caagccgtgg cggccgccga tgcggttggc
    11101 ttcgaggaag agttcgacgg ggtcggcgta ttctttgccg ttcaatgcaa ccggcacgcc
    11161 ttcttcaaag cgcacgctga cttcttcggg ttcaatttcg acgttttcgt cccagaaggc
    11221 aacgcccatg atgggcttaa cgattttgat gcccgagttc aaaaattcca agtctttggc
    11281 ttcgtgggtc gcgccgagca tattggaatc ggtggagtag gctttttcaa ccgacatttt
    11341 gtagttgaag ccgttggcaa tcagaaattc gctcatttcg tgacggccgc cgagttcgtc
    11401 gataaattgc tggtcgagcc agggtttgta gattttcagc gcgggattgg tgagcaagcc
    11461 gtagcggtag aaacgctcga tgtcgttgcc tttgtaggtg ctgccgtcgc cccagatatt
    11521 cacatcgtct tctttcatgg cggaaacgag catggtgccg gtcacggcgc ggcccagagg
    11581 cgtggtgttg aaataggcga tgccgccggt ggaaacgtgg aacgcgccgc attggatggc
    11641 ggcgatgcct tcgtgtgcca gttgtgcgcg gcagtcgatc aggcgggcgt tttccgcacc
    11701 gtattccatt gcttttttgg gaatggcgtt gtaatcgtct tcgtcgggct ggccaaggtt
    11761 ggcagtgtag gcataaggca gcgcgccttt gagtttcatc cacaacagcg cggcagaggt
    11821 atcaagaccg ccggagaagg cgatgccgac tttctgaccg acggggaggt tttgtaaaat
    11881 agtatggttt tggttcatga aaaaatcctc gatagcttga aaaatcaaag ccattatctt
    11941 ataaatagaa aatattgtca gccatcatgc cgtctgaacg ggtattccgc cgtttcaggc
    12001 ggtatttaaa accgaaaaca ttatgaacgc gttcaacctc atcatcatcg gagacgaaat
    12061 cttacacggc agccgccaag acaagcattt cgcctttttt aaatccctgc tcgaatccaa
    12121 agggctgaag ctcaatcagg tgcaatatct gcccgacgaa cccgatttgc tggtcaggca
    12181 actgcgccgc agcttttcag acggcatacc gacgttcgtt accggcggca tcggcgccac
    12241 gcccgacgac cgcacgcgcc aaaccgcagc ggctgctttg gatttgcccg tcgtccgcca
    12301 tcctgaagcc gccaagttta tcgaaggcat aacccggaaa cgcggcaagc cgctcgattc
    12361 gcccgaacac gcccaacgcc tgaaaatggc ggatttcccc gagggcgcag agcttgtgcc
    12421 caacccgttc aacaacatcg ccggattttc catccgcgag cattatttct tccccggctt
    12481 tcctgtgatg gcgcacccga tggcggaatg ggttttggaa acttattatg ccggccgctt
    12541 caaccaaacc gaacgcggca gccgcagcgt gtatgtgttt gagcagcccg aatcgcgcat
    12601 tacgccgatt atagagcata tcgagcaaac ttatcccggc gtgcgttcgt acagcctgcc
    12661 cagcgtcggt tggacgcatt cagacggcac gcaggtcaaa ccgcacattg agttcggcat
    12721 caaagccgaa ggagaagccg tcaacctttt ggacgcggcg tgggcggaag tgttgcacag
    12781 cttggacgga ttgggagcaa agctgaaaaa tcgggtaaac tgaaaactgt ttgcccaaat
    12841 cggacgatat ttaaggaaaa ccatgcaata ccgaatcaga agagaaaacg aagcacccga
    12901 agcaaaaaat gcgggggaaa ccttatggga gcgcgacatt atgcgcgaag tgctgctgtc
    12961 cgcctatcgg gacaggcgca gggagcggat gtggaaaaac atctggcgcg ccgtcagcac
    13021 cctgattctg gttgccctga ttgcaggcat tttccgaaaa gacgaagccg cattgcagtt
    13081 ggcgggcaac acgccgcata ccgcagtcgt caacctgtac ggcaaaatcg gcaacggcgt
    13141 agaagaccag gtcaaaaaac tcaaagacgg gatggaggcc gcctacaaaa acccgcaggc
    13201 aaaagccatc gtcatccgcg ccaacagccc cggcggttcg cccgtcgtct ccaacaccgc
    13261 ttttgaagaa atacgccgtc tgaaggcgca gcaccccggc atccccgttt atctcgtggc
    13321 agaggatatg tgcgcgtccg gctgctacta catcgcggcg gcggcggaca aaatctatgc
    13381 cgacccgtcc agcatcgtcg gcagcatcgg cgttatcggc agcagtttcg atgcgaccgg
    13441 cctgatggaa aaaatcggcg taaaacgcag ggttaaaatt gcgggcagca acaaaggcat
    13501 gggcgatccg ttttcgcccg aaacgcccga acagtcgaaa atctgggaag aaatgctgac
    13561 cggcatacac ggcgaattta tcaaagccgt caaaaccgga cgcggcggcc gcctcaaatt
    13621 ccgacaatat cccgacgtgt tcagcggtcg cgtgtacaca ggcgcggacg cgctgaaagt
    13681 cgggctggtg gacggactcg gcaatattta cagcgtggcg cgagacgtgg tcaaagctcc
    13741 cgatgtggtg gattacactc cgaaggacga tttcggcaga atcttgggca gacgcttcgg
    13801 agcagaactc aaagcaagcg tttcggaagc tctgcaggcc gtccggtagc gttgtttaca
    13861 gtatttctaa gggaatacca gaataaaaat atacacaaaa acactcacct ccccagtatg
    13921 ctgccactaa gtcagccgcg ttactattta ccgtgcactt aaagccgcaa aaggcaggtt
    13981 gtccccggga ggttttgtgc atcctgatac cgatcggttg ctgttgctgt tgctgttgct
    14041 caaaggacgg aaggccgccg ataaacgaga ttacctgttt gtcgctattg acgattttta
    14101 tactctgcca ttttgccgga caaaaccgca gacagtgctg ccaagtttct gaccgaacat
    14161 ctggctgacc cctgcttgta cctggttgag tacgtttact ctgacaatga taggtaatat
    14221 aaagagccgt ccaacatgct ttcggtgcag cttgttatga taatgggatt ggttggaggc
    14281 ttgcccgatt tgcttgtccg cagaccaacg gtaaggcgga gcgggttatc cgtaccttga
    14341 tggagatgtg gcatgaggaa cagtcgtttg acagtccgga acatcagcaa aaggagttgt
    14401 gctgctttat taatttaggc gctgtcctag ataactaggg aaattcaaat taagttagaa
    14461 ttatccctat gagaaaagcc gtctaagccg gtataaacaa aataaactca ttgggctatt
    14521 tgtcgcaggt gtaactgcaa gaacagcggc agagttggta ggcgttaata aaaataccgc
    14581 agcctatgat tttcatcgtt tacgatgact gatttatcaa aacggtccgc atttagaaat
    14641 gtttgatggc gaagtagaag cagatgaaag ttattttggc ggacaacgca aaggtaaatg
    14701 cggtcgcggt gctgccggaa aagtcgcagt attcaggctt ctcaaacgaa atggtaaggt
    14761 ttcctttgcc gtccgttatg tacgtttcgt aacattcgaa gacttcctga accctgcccg
    14821 ccgtttcggt ttccgtaccc ccctgttaga taagggggga agattcgaag cggttgccgg
    14881 cttcctgccg tccgccggcg cctccgtcat cacgccggca accgcctttg tcatcccttg
    14941 cttatctccc atgtgcgaat cctcaaaaac gggcaaaaaa aaagccctgt tacttgtaga
    15001 aagtaaaggg cgttaatttt tgttaatcgc cccttcttag ggacgcaata tataaggttt
    15061 atacggttac tgtagcgaat actcaaaccg ctactttatt tcctattatc cgcgaacaag
    15121 tgaaacctga cagcattgtt tatacggatt gttatcgtcg ctatgatgta ttggatgcgg
    15181 gcgaatttag ccatttccgt atcaatcaca gcacacattt tgccgaacga caaaaccata
    15241 ttaatggaat tgggaacttt tggaaccggg caaaacgtca tttacgcaag tttgacggca
    15301 ttcccaaaga gcattttgag ccgtatttaa aggagtgcga acggcgtttt aacaacagtg
    15361 agataaaagt tcttgttcca ttttaaaaca attagcaaaa tcgagtttat cctagttgtc
    15421 caggacggcc ccttaatttt tataacgtca tgaagccgca cagcagtttg aacagtgata
    15481 cgccgtttgc gggcttacga gtttattttc ccggcctgca gtttgagcaa tgcggtgatt
    15541 tcctacggct aatacaaatg tttacacatt aatacatttc atttatagtt ccgcctattt
    15601 gaaaatagaa aatatgaatt cgaccgcaag taaaaccctg aaaggattgt cgctggtgtt
    15661 tttcgcctct ggcttctgcg ccctgattta ccaggtcagc tggcagaggc ttctattcag
    15721 ccacataggt atcgatttga gttcgattac tgtcattatt tctgtattta tggtcggctt
    15781 gggtgtaggt gcgtatttcg gcggacgcat tgctgaccgt tttccttcaa gtatcatccc
    15841 cctgttttgc atcgctgaag tatccatcgg tctgttcggt ttggtaagca agggtctgat
    15901 ttccggcttg gggcatcttt tagttgaggc tgatttgccc atcatcgctg ctgccaattt
    15961 cctcttattg ctgcttccta cctttatgat gggcgcgacc ttgcccttgc tgacctgttt
    16021 ttttaaccgg aaaatacata atgttggcga gtctatcggt accttatatt ttttcaacac
    16081 tttgggtgcg gcactcggat cgcttgccgc cgccgaattt ttctacgtct tttttaccct
    16141 ctcccaaacc attgcgctga cagcctgcct taaccttctg attgctgctt cagtatggct
    16201 gcgttacaga aaggatggat atggtgaaca ctaaaccgaa tactagtttg atttatatgc
    16261 tttctttcct tagcggatta ttgagcttgg gtatagaagt cttgtgggta aggatgtttt
    16321 cgttcgcagc acagtccgtg cctcaggcat tttcatttac tcttgcctgt tttctgaccg
    16381 gtatcgccgt cggcgcgtat tttggcaaac ggatttgccg cagccgcttt gttgatattc
    16441 cctttatcgg gcagtgcttc ttgtgggcgg gtattgccga ttttttgatt ttgggtgctg
    16501 cgtggttgtt gacgggtttt tccggcttcg tccaccacgc cggtatcttc attaccctgt
    16561 ctgccgtcgt cagggggttg attttcccac ttgtacacca tgtgggtacg gatggcaaca
    16621 aatccggacg acaggtttcc aatgtttatt tcgccaacgt tgccggcagt gcattgggtc
    16681 cggtccttat cggctttgtg atacttgatt tcttgtccac ccaacagatt tacctgctca
    16741 tctgtttgat ttctgctgct gtccctttgt tttgtacacc gttccaaaaa agtctccgac
    16801 tgaatgcagt gtcggtagca gtttccctaa tgttcggcat cctcatgttc ctactgccgg
    16861 attccgtctt tcaaaatatt gctgaccgtc cggataggct gattgaaaac aaacacggca
    16921 ttgttgcggt ttaccataga gatggtgata aggttgttta tggggcgaat gtatacgacg
    16981 gcgcatacaa taccgatata ttcaatagtg tcaacggcat cgaatgtgcc tatctgccac
    17041 cctccctgaa gtccggcata cgccgcattt tcgtcgttgg attgagtaca ggttcgtggg
    17101 cgcgcgtctt gtctgccatt ccggaaatgc agtcgatgat cgttgcggaa atcaatccgg
    17161 cataccgtag ccttatcgcg gacgagccgc aaatcgcacc gcttttgcag gacaaacgtg
    17221 ttgaaattgt attggatgac ggtaggaaat ggctgcgtcg ccatcctgat gaaaaattcg
    17281 acctgatttt gatgaattcg acttggtact ggcgtgccta ttccactaac ctgttgagtg
    17341 cggaattttt aaaacaggtg caaagccacc ttaccccgga tggtattgta atgtttaata
    17401 ccacgcacag cccgcatgct tttgctaccg ccgtacacag tattccctat gcataccgct
    17461 acgggcatat ggtagtcggc tcggcaaccc cggtagtttt ccctaataaa gaactgctca
    17521 agcaacgcct ttcccggttg atttggccgg aaagcggcag gcacgtattt gacagcagca
    17581 ccgtggatgc tgcagcacaa aaggttgtct ctcgtatgct gattcggatg acggaacctt
    17641 cggctggggc ggaagtcatt actgacgata atatgattgt agaatacaaa tacggcagag
    17701 ggatttaacc gtcttaaagg gtttcaggca acgcaggttt taggtaacgt cctgctagtt
    17761 caaaaaaacc gcatcacagc agtcgggaca aaatggttta aacattttgt cccgaattct
    17821 tattcctata tatagcggat taacaaaaat caggacaagg cggcgggccg caggcagtac
    17881 aaatagtacg gaaccggttc gcttggtgct tgggcacctt agggaaccgt tccccttgag
    17941 ctaaggcggg gcaacgccgt accggttttt gttaatccgc tataccacga attacggtgt
    18001 aaaaatttat atgaccttat aaaatcaaat aagaatcgtt atcataacat gattgtattt
    18061 attgggtttt tttgggcgtt ttgccgatat ttacctttta atggtttttg aaattcgcta
    18121 aaatacgaaa ttattgtaga aattttgtta acggatttgg gtgtaaccat gttgtccgct
    18181 tactttcccg tctttgtctt tatcctcgtc ggcctcgcgg ccggcgtact gtttatcctg
    18241 ctcggcacga ttttgggccc gaaacgccac tatgccgaaa aagacgcgcc ttacgaatgc
    18301 ggttttgaag cctttgaaaa cgcaaggatg aagttcgacg tgcgctatta cctcgtcgcc
    18361 atcctgttca tcctcttcga tttggaggtt gcgtttatgc tgccgtgggc agtcgtgttc
    18421 aaagatttgg gcgcgtacgg cttttggtct atgctggtgt ttatcgtcgt cctgacggta
    18481 ggctttgttt acgaatggaa aaaaggtgcg ctggaatggg aatagaaggc gttttgaaaa
    18541 aaggtttcat caccaccagc gcggatacgg tgttgaacta tatgcgtacc ggttcattgt
    18601 ggccggttac tttcggattg gcctgctgcg ccgtggaaat gatgcatgcg ggtatggcgc
    18661 gttatgacct tgaccgtttc ggtatcattt tccgtccgtc cccacgtcag gccgacctga
    18721 tgattgtggc aggtacgctg accaataaaa tggcgccagc cctgcgtcgc gtgtacgacc
    18781 agctcgccga gccgcgctgg gtattgtcta tgggttcgtg tgccaacggc ggcggctatt
    18841 atcactattc ttattccgtt gtgcgcggtg ccgaccgtgt cgtgccggtg gacgtttatg
    18901 tgccgggttg tccgccgact gcggaagctc tgatttacgg cctgattcag ctccaacaaa
    18961 aaatcaagcg cacttccacc atcgcgcgtg acgagtaagg agaggacgat atggcaagca
    19021 ttcaaaactt atacgagacc gtcgtcggcg tgcttggcga tcaggcaggc aaagtcattt
    19081 cagctttggg cgagattacc gtcgagtgtc tgcccgagca ctatatttca gtcatgaccg
    19141 cattgcacga ccatgaagat ttgcatttcg agcttctggt tgacttgtgc ggcgtcgatt
    19201 acagcactta caaaaacgaa gcatggcagg gcaaacgctt tgccgttgtc agtcagttgc
    19261 tttccgttaa aaacaatcaa cgcatccgcg tacgcgtctg ggtttcagac gacgacttcc
    19321 ctgtagtcga atccgtagcc gatatttaca acagcgcgga ttggtacgag cgcgaagcct
    19381 tcgatttgta cggcatcatg ttcaacaacc atcccgactt gcgccgcatc ctgaccgatt
    19441 acggctttgt cggacatccg ttccgcaaag acttcccgat ttccggctat gtggaaatgc
    19501 gttatgacga agagcaaaaa cgcgtgattt accaacctgt taccattgag ccgcgcgaaa
    19561 tcacaccgcg tatcgtccgt gaggagaact acggtggcca ataaattaag aaactacacc
    19621 atcaacttcg gcccgcagca ccctgcggcg catggcgtat tgcgtatgat tttggagctg
    19681 gacggcgaac aaatcgtccg tgccgatccg catatcggcc tcctgcaccg gggcaccgaa
    19741 aaactggcgg aaaccaaaac ctatctgcaa gccctgccct atatggaccg tttggactac
    19801 gtttccatga tggtcaacga gcaggcgtat tgcttggcgg tagaaaaact tgccggtatc
    19861 gatgtgccta tccgcgccca atacatccgc gtgatgttcg ccgaagtaac gcgcatcctc
    19921 aatcacttga tgggcatcgg ttcgcacgcc ttcgacatcg gcgcgatgac cgccatcctc
    19981 tacgccttcc gcgaccgcga agagctgatg gacttgtacg aagccgtgtc cggcgcacgt
    20041 atgcacgccg cctacttccg tcccggcggc gtttaccgcg acctacccgg ctttatgccc
    20101 aaatacgaga gcagcaaatt ccgcaatgcc aaagtattga agcagctcaa cgaatcccgc
    20161 gaaggcacga tgcttgactt tatcgatgcc ttctgcgaac gcttccccaa aaatatcgac
    20221 acactcgaaa ccctcctgac cgacaaccgc atctggaaac agcgtaccgt cggcatcggc
    20281 gttgtctctc ccgagcgcgc catgcaaaaa ggctttaccg gtgtgatgct tcgcggttcc
    20341 ggcgtggaat gggacgtgcg taagacacag ccctacgaag tgtacgacaa aatggatttc
    20401 gacatccccg tcggcgtcaa cggcgactgc tacgaccgtt acctctgccg tatggaagaa
    20461 atgcgccaat ccgtacgcat catcaaacaa tgcgccgact ggttgcgcgt caatcccggc
    20521 ccggtcatta ccgcaaacca caaattcgct ccgcccaaac gtaccgaaat gaaaacaggt
    20581 atggaagacc tgattcacca tttcaaactc tttaccgagg gtatgcacgt tcccgagggc
    20641 gagacctaca ccgctgtcga acacccgaaa ggcgagttcg gcgtttacat catttcagac
    20701 ggcgcaaaca aaccctaccg cctgaaaatc cgcgcacccg gcttcgccca cctgcaaggc
    20761 atggacgaaa tggcaaaagg ccatatgctc gccgacgtcg ttgccatcat cggtacgcag
    20821 gacatcgtat tcggggaggt tgaccgataa tgttatccgc aaaatcctta aaacaaatcg
    20881 acattgagtt ggcgaaatat cccgccgacc aacgccgttc cgccatcatg ggcgcgttgc
    20941 gtatcgccca aaccgaaaaa ggctggctcg cccccgaaac catcgctttt gttgccgact
    21001 acatcggcat cacgccggcg caggcatatg aagtcgccac tttctacaat atgtacgacc
    21061 ttgagcctgt cggcaaatac aaactgaccg tttgtaccaa cctgccctgc gctctgcgcg
    21121 gcggtatggc gaccggcgaa tacctcaaac aaaaactcgg tatcggctac ggcgaaacca
    21181 cgcccgacgg caaatttacc cttgtcgaag gcgaatgcat gggcgcgtgc ggcgatgccc
    21241 ccgttatgct ggtcaacaac cacagcatgt gcagctttat gaccgaagag gcgattgaga
    21301 agaaactggc ggagttggag taggtcgtct gaaacgacga tttaaacgta ggtcggatac
    21361 ttgtatccga cagagtgggt aaaaaggcaa aatgtcggat ttaagaatcc gccctactga
    21421 aatactgaaa tgccgtcatt cccgcgcagg cgggaatcca ccggtaagat tcggtttctg
    21481 aatttaataa gacattgctt accattgagg atggattccc gcctgcgcgg gaatgacggc
    21541 agacaagcaa gtggtcgaga tccaacaaaa acgattgaag gtcgtctgaa aatatcgatt
    21601 tgataaacta gattttattt cagaagacgt tacaagccga tacacaaaga cattttaagg
    21661 tcgtctgaaa cagcggccgc aaccgatacg aaaacaaaca ggcacaccaa aaatggctat
    21721 ttaccaatca ggcgtgattt ttgaccaagt ggataccgcc aatcccgatt gctggacatt
    21781 ggacgaatac gtcaaacgcg gcggctatac cgccctgcgt aaaatcctgt ccgaaaacat
    21841 ctcgcaaacc gatgtgattg acgaagtcaa aacctccggc ttgcgcgggc gcggcggtgc
    21901 gggcttcccg accggtttga aatggagctt tatgccccgt tctttcccgg gcgaaaaata
    21961 tgtggtttgc aacaccgacg aaggcgagcc gggtacattt aaagaccgcg acatcatcat
    22021 gttcaatcct catgccctga ttgaaggcat gatcattgcc ggttacgcga tgggcgcgaa
    22081 agccggctac aactatatcc acggcgaaat tttcgaaggt tatcaacgct ttgaagccgc
    22141 tttggagcag gcgcgtgccg caggcttttt gggtaaaaat attttgggtt cggattttga
    22201 attcgaactc ttcgcccacc acggctacgg cgcatatatt tgcggcgaag aaaccgcatt
    22261 gcttgaatcg ttggaaggca aaaaaggcca gccgcgcttc aaaccgccgt tccccgcctc
    22321 gttcggcctg tacggcaaac cgaccaccat caacaatacc gaaacgttct cctccgttcc
    22381 attcattatc cgtgacggcg gacaggcgtt tgccgataaa ggtattccga atgcaggcgg
    22441 taccaaatta ttttgtattt ccggccatgt cgagcgtccg ggcaactatg aagtgccgtt
    22501 gggcacgccg tttgccgaag tcttgaaaat ggcgggcggt atgcgcggcg gtaaaaaact
    22561 caaagccgtt attcccggcg gttcgtccgc ccccgtattg cctgccgaca ttatgatgca
    22621 gaccaatatg gactatgact cgatttccaa agccggctcg atgctcggtt ccggcgcgat
    22681 tatcgtgatg gacgaagacg tgtgcatggt caaagccctc gaacgcttaa gctatttcta
    22741 ctacgacgaa tcctgcggcc aatgcacccc ctgccgcgaa ggtaccggct ggctttaccg
    22801 catcgtccgc cgcatcgtag aaggcaaagg ccgcatggaa gacttggatt tgctggattc
    22861 tgtcggcaac caaatggcag gccgcaccat ctgcgccctt gccgatgccg ccgtcttccc
    22921 tgtccgcagc tttaccaagc atttccgtga tgagtttgcg cattacatcg aacacggcgg
    22981 gccgatgaaa gagcataagt ggggagggtg gtaatggtgg aagctaaaat ttttattcta
    23041 tacggtgcag ccaacaaagg taagagtacg acactcaata cgctttttaa tcagatttgt
    23101 cggaaatttt ctaaatttct agtctttttt gaaagatatg gaaacggctt agattttgtt
    23161 gcagtatttg atcatgaagg tcagaggatt ggtttttatt catctggtga taatgaatac
    23221 gaggttagga gaaatttata caaactttat tcgcataatt gtgattttat tttggcacgt
    23281 caaggacacg gggtggtagt tgcgatgcag taggatattg catggcgatg taaatataat
    23341 taattggtgt gaaaagtttg agcctacaga tgaagacaat gagcgtgctg ttaaagagtt
    23401 atttaagtca tttaaaaata taataaatga gttatagttt tagttggttt tatattggtt
    23461 aaaagcaaaa tgctaaaaat ttaactttgc cgtcattccc gcacaggcgg gaatccatag
    23521 tggaatttac agaacccgat atttgaaaag cagttgccga aattcaaaaa atggattccc
    23581 gcctgtgcgg gaatgacggc aaggtggcag taaacgtttt aaacagtatt gattgtcaat
    23641 gaaactcaaa aggccgtctg aagcccattt ttcagacgat ctccataaaa aattatttat
    23701 caaatacccg taactaggaa cgaaccatgt tacaaatcga aatcgacggc aaacaggtat
    23761 ctgtggagca gggcgcgacg gtaattgaag ccgcgcacaa gctcggtact tatattccgc
    23821 atttctgtta ccacaaaaag ctctctattg ccgccaactg ccgtatgtgt ctggtggatg
    23881 tggaaaaagc ccccaaaccg ctgcctgcct gtgccacgcc ggtaacggac ggcatgattg
    23941 tgcgtacgca ttcggcaaaa gcccgagagg cgcaagaagg cgtgatggag ttcctgctca
    24001 tcaaccatcc gcttgattgt ccgacctgcg accagggcgg cgaatgccag ttgcaggatt
    24061 tggcggtggg ctacggcaaa accaccagcc gttataccga agaaaaacgt tccgtcgtcg
    24121 gcaaggacat gggtcctttg gtttccgccg aggaaatgag ccgctgtatc cactgtaccc
    24181 gctgcgtacg tttcaccgaa gaaatcgccg gtttgcagga aattgcgatg gtgaatcgtg
    24241 gtgaacactc cgaaatcatg ccctttatcg gcaaagcggt ggaaaccgag ctgtcgggca
    24301 acgtcatcga tttgtgtccc gtcggcgcat tgaccagcaa accgttccgc ttcaacgcgc
    24361 gtacttggga attgaaccgc cgcaaatccg tttccgcaca cgacgctttg ggcagcaacc
    24421 tgattgtaca aaccaaagac cataccgtcc gccgcgtgtt gccgttggaa aacgaagcca
    24481 tcaacgaatg ctggctgtcc gaccgcgacc gttttgccta cgaaggcctg tatcacgaaa
    24541 gccgtctgaa aaatccgaaa atcaaacagg gtggcgagtg gatggacgtg gattggaaaa
    24601 ccgcgttgga atatgtccgc agcgcgattg aatgtatcgc caaagacggc aaccaaaacc
    24661 aagtcggcgt ttgggctaat ccgatgaata cggttgaaga gctgtatctg gccaaaaaat
    24721 ttgccgacgg cttgggtgtt aaaaactttg caacccgttt gcgccaacaa gacaaacgtc
    24781 tttcagacgg ccttaaaggt gcgcaatggt tgggacaaag tattgaatct ttggctgaca
    24841 acgatgccgt attggtagtc ggtgcgaact tgcgcaaaga acagccgctc ctgaccgccc
    24901 gcctgcgccg cgccgccaaa gaccgtatgg ccttgagcgt attggccggc agtaaagaag
    24961 aattgtttat gccgcttctg tctcaagaag ccgcacatcc cgacgagtgg gcaggccgtc
    25021 tgaaaaacct gtctgccgat gcggaacatg ccgttaccgc cagcctgaaa aacgctgaaa
    25081 aagcagcggt gattttgggt gcggaagtgc aaaaccatcc tgattacgcc gccatttatg
    25141 ccgccgcgca agagttggcg gacgcgaccg gcgcagtgct gggcattttg ccgcaagccg
    25201 ccaacagcgt cggtgcggac gtattgggtg tgaactcggg cgagagcgtt gccgaaatgg
    25261 caaacacgcc gaaacaggca gtcttgctgc tcaacgtcga gcctgaaatc gatacggttg
    25321 acggtgcaaa agccgtagcc gcgttgaaac aggcgaaaag cgtgatggcg tttacgccgt
    25381 ttgtcagcga aacgctgctg gacgtgtgcg acgtattgct gccgattgcg ccgtttaccg
    25441 aaacatcagg cagcttcatc aatatggaag gccgtctgca atctttccac ggcgtggtac
    25501 aaggcttcgg cgattcacgt ccgttgtgga aagtgttgcg cgtattgggc aacctgtttg
    25561 acctgaaagg ttttgaatac cacgataccg ccgcgattct gaaagacgcg ctggatgcgg
    25621 aaagcctgcc gtccaaactg gacaaccgca gcacatgggc aggggagggc gttcagacgg
    25681 cctcaaaccg cctcgtccgt gtcggcggcg tcggtattta tcatactgat tctatcgtgc
    25741 gccgttccgc accgttgcaa gaaaccagcc atgccgccgt gcctgccgcg cgtgtaaatc
    25801 cgaacacatt ggcacgcttg ggcctgcaag acggacaaac cgctgtcgcc aaacaaaacg
    25861 gcgcaagcgt atcggttgcc gtcaaagccg atgccggttt gcctgaaaac gtggtgcatc
    25921 tgccgctgca taccgaaaat gccgcgctgg gtgcgttgat gggcactatt gaactggcgg
    25981 gagcttgatt atgcaggaat ggttccaaaa cctctttgcc gcaacgctcg gtctgggcga
    26041 tttgggcatc accgtaggct tggtggtatc cgtcatcgtc aaaatcgtga ttatcctgat
    26101 tccgctgatt ctgaccgttg cctacctgac gtatttcgaa cgtaaagtca tcggctttat
    26161 gcagcttcgc gtcggcccga acgtaaccgg cctgcggggt ctgattcagc cgtttgccga
    26221 cgtgttcaaa ctcttgttta aagaggtaac ccgtccgaag ctgtcaaaca aagccttatt
    26281 ctacatcggc ccgattatgt cgctcgcccc gtctttcgcg gcgtgggcgg tgattccgtt
    26341 taacgaagaa tgggtgctga ccaatatcaa tatcggcctt ttgtacatcc tgatgattac
    26401 ctcgctgtcg gtttacggcg tgattatcgc gggctgggct tccaactcca aatattcgtt
    26461 cttgggtgca atgcgtgctt ccgcgcaaag catttcctac gagattgcca tgagtgccgc
    26521 gctggtgtgc gttgtgatgg tatcgggcag catgaacttc tccgacatcg ttgccgcgca
    26581 ggcaaaaggc atcgcgggcg gttctgtgtt ctcgtggaac tggctgccgc tgttcccaat
    26641 cttcatcgtc tatctgattt ccgccgttgc cgaaaccaac cgcgcaccgt ttgacgtggc
    26701 agagggcgag tctgaaatcg ttgccggaca ccacgtcgaa tactccggct ttgcattcgc
    26761 gctgttcttc cttgccgaat acattttcat gattctgatt gccgcgctga catcgctgat
    26821 gttcctcggc ggctggttgt ctccgttccc gcaaagctgg ggcattgtcg gtacgccttc
    26881 cgcattctgg atgttcgtga aaatggcggc ggtgctgtac tggtatctgt ggattcgtgc
    26941 aaccttccca cgctaccgct acgaccaaat catgcgtttg ggctggaaag tgctgattcc
    27001 gatcggcttc gcctacatcg tggttttggg cgtgtggatg atttcaccgc tgaatttgtg
    27061 gaaataagtt tcagacggca tcttgaggcc gtctgaacaa agcgattttg aatacctaac
    27121 gaaatccctg ttttgaggga acataatatg gctaacttag taaaaacctt tctgcttggc
    27181 gaactggtca aaggcatggg cgtaacgctc aaaaactttt ttgcccgcaa agacacaatt
    27241 tattttcccg aagagaaaac gccgcaatcc gtgcgtttcc gcggtctgca cgcgcaacgc
    27301 cgttatccga acggagagga acgctgcatc gcgtgtaaat tgtgcgaggc ggtgtgtccg
    27361 gcaatggcga tcaacatcga atcggaagaa cgcgaagacg gcacccgccg caccaagcgt
    27421 tacgacatcg acctgaccaa gtgcatcttc tgcggtttct gcgaagaggc ctgcccgacc
    27481 gatgcgattg tggaaaccca tatttttgaa taccacggcg agaaaaaagg cgacttgcat
    27541 atgaccaagc ccatcctctt ggcaatcggc gacaaatacg aagccgaaat cgccaaacgc
    27601 aaagccgctg acgcgccgta ccgctaagga gcagacgaat gactttttcc gtgattctgt
    27661 tctatatcct tgccgccatc gttttgtacg gtgcggttcg taccgttacc gccaaaaacc
    27721 ctgtccatgc cgctttgcat ctggtgctga ccttctgcgt gagcgcgatg atttggatgc
    27781 tgatgcaggc ggagtttttg ggcgtgacgc tggtggtggt ttacgtcggc gccgtaatgg
    27841 tgttgttcct gttcgtcgtg atgatgctga atatcgacat cgaggaaatg cgcgccggtt
    27901 tctggcggca cgcgcctgtt gccggtgtgg tcggtacgtt gttggcggtt gccctgatcc
    27961 tgattctggt caacccgaaa accgacctgg ccgcatttgg tctgatgaaa gacattccgg
    28021 ccgattacaa caatatccgc gatttgggca gccgtattta taccgactac ctgttgccgt
    28081 ttgaattggc ggcggtattg ctgctgttgg gcatggtggc cgcgattgca ttggttcacc
    28141 gcaaaaccac caatccgaaa cgtatggatc cagccgacca agttaaagta cgcgccgatc
    28201 aaggccgtat gcgtctggtg aaaatggaag cggtcaaacc gcaagtcgaa tctgccgaag
    28261 aaagcgaagt ttcagacggc ctcaagacgg aaggggaggg caaagcatga ttactttgac
    28321 gcattatctg gtattgggcg ctctcctgtt cggtatcagc gcgatgggca tctttatgaa
    28381 ccgcaaaaac gtgctggtat tgctgatgtc catcgagctg atgcttttgg cggtgaactt
    28441 caactttatc gccttctcgc aacatttggg cgatactgcc ggacaaattt tcgtattctt
    28501 cgtattgacc gttgccgctg ccgaatctgc catcggtttg gcgattatgg tgctggtgta
    28561 ccgcaaccga caaacgatta atgttgccga tttggacgag ttgaaagggt aatcatgaac
    28621 gatatgactt tatatttgat aattgccctt gttccgttgg caggctcgct gattgcgggt
    28681 ttgttcggca acaaaatcgg gcgtgccggc gcgcatacgg ttacgatact cggtgtcgct
    28741 gtatctgccg tgctgtcggc ttatgtgctg tggggattcc tcaatggcag ccgtaccaag
    28801 tttgacgaaa acgtctatac ctggctgaca atgggcggct tggatttttc cgtcggcttc
    28861 ttggtcgata cgatgacggc gatgatgatg gtcgtggtaa cgggcgtgtc gttgatggtg
    28921 catatctata ccatcggtta tatgcacgat gaaaaagtcg gctaccaacg cttcttcagc
    28981 tatatttctt tgtttacatt cagcatgttg atgctgatta tgagcaacaa cttcatccag
    29041 ctcttcttcg gttgggaagc ggtgggcttg gtgtcgtatc tcttgatcgg tttctatttc
    29101 aaacgcccgg gcgcgacatt tgccaacctg aaagcctttt tgatcaaccg tgtcggcgac
    29161 ttcggctttt tgctcggtat cggcttggtg cttgcctatt tcggcggcag cctgcgctat
    29221 caggacgtat tcgcctatct gcccaacgta caaaatgcca ccatccaact gtttcccggt
    29281 gtggaatggt ctttgattac cgtaacctgt ttgctcctgt ttgtcggtgc gatgggtaaa
    29341 tcggctcagt tcccgctgca tgtctggctg cccgattcga tggaaggccc gacgccgatt
    29401 tccgcattga ttcacgccgc aacgatggtt acggcgggtc tgttcatggt gtcgcgtatg
    29461 tcgccgattt acgaaatgag cagcactgcg ctgtcggtca ttatggttat cggcgcgatt
    29521 accgccctgt ttatgggctt cttgggcgtg attcaaaacg acatcaagcg cgtggttgcg
    29581 tattccaccc tgtcgcaatt gggctacatg accgtggctc tgggcgcatc cgcctattcc
    29641 gtggcgatgt tccacgtcat gacccacgcc ttctttaaag ccttgctgtt cttggcggcg
    29701 ggcagtgcga ttatcggtat gcaccacgat caagatatgc gccatatggg caacctgaaa
    29761 aaatacatgc cgattacttg gctgaccatg ctgatcggta acttgtcgct gatcggtacg
    29821 ccgttcttct caggcttcta ttccaaagat tcgattatcg aagcagccaa atacagcacc
    29881 ctgccgggca gcggctttgc ctattttgcc gtcctcgcca gcgtgtttgt tactgcgttc
    29941 tacgcgttcc gccaatactt tatggtgttc cacggcgaag agaaatggcg cagcctgcct
    30001 gagcatcatg acgatcatca tggcgaagaa catcacggct tgggcaaaaa cgacaatccg
    30061 cacgaaagcc cgctggtcgt taccctgcct ttgattctgc ttgcaattcc gtccgtcatc
    30121 atcggctatg ttgccatcga gcctatgctt tacggcgatt tcttcaaaga cgtgattttc
    30181 gtcaacgccg acgcgcatcc gaccatgcac atcatgaaag aagagttcca cggcgcattg
    30241 gcgatggtgt cgcacagtct gcattcgccc gtcctctatc tcgctaccgc aggcgtattg
    30301 agcgcatggc ttttgtacat caaactgccg cacctgcccg ctaaaatcgc gcaggcgttc
    30361 cgtccggttt acgttttgtt tgaaaacaaa tactacctcg acgccttgta tttcaacgtc
    30421 ttcgccaaag gcacgcgcgc attgggaaac ttcttctgga aagtcggcga taccgccatt
    30481 atcgacaacg gcatcgtcaa cggctccgcc aaactggtcg gcgcaattgc cgcgcaagtg
    30541 cgtaaagtcc aaaccggctt tatctacacc tacgccgccg ctatggtgtt cggcgtattg
    30601 gtattgctcg gcatgacctt ctggggattg ttccgataag gatgaggctt cagacggcct
    30661 gcttatcgct ggtgtagagg tcgtctgaaa agaaggtttc aggcggcaat agattagagt
    30721 ttcagacgac atctgacatt tcagatagtc aggccgtctg aaaaatagaa gggcggataa
    30781 tatggataaa cggctgtttg acggtacggt tcgttttgag catgtaaccg gtgtcggcac
    30841 gatgcaggta gatttccagc ccaatcagcg tgtttatacg atgattggcg agaatggtgt
    30901 cggtaagacc aaatttttgg aatgtttgtt tacggtattg ttgtttactt atcgaatggc
    30961 gaacataaac ataggtttta gttggataga tttgcaacgt ttacctttga aaatagttga
    31021 attgcctaat ggaaaaaatg aggattttag gcgcttttca gagcgtagta atcagggctt
    31081 taatattaac gaagacgttt tgttctcagg atatcaacat cgacttcctt ttgtatattt
    31141 gccggcacag agtcgtgggt gggtaaaaaa acaaacttcc aaactcagtc gctgggaagt
    31201 tctcaagggc gtgcaagcaa atatctgggg aatttgtttt ctgtttttca atctggccat
    31261 agttcattct cgcttaaatc cttaaatatg gaaaacgatt tagaagaatg gattatccag
    31321 cgcgcccgat cagccaatcc gtatcaggca aacgaagata atcgaaaaat tgaaattgat
    31381 actttactgt ttcttcttaa tcaatttgat ggtcgtattg cacctgattt tttagaaatt
    31441 aaaggagatg atcgtatatt catcaagttg gataatcaaa aacgcgaatt gtcaggatta
    31501 tccagcgggt ttacgtctat tttgaaaatt atgcaatcta ttgttgcggg atacagttac
    31561 tttaccaatg agcagcaaat tgccaatgtg cgcggcgtgg tgctgattga cgaaatagaa
    31621 agccatttgc acaacgaatg gcagatcaaa atcgtgccgc tgctgaaaaa attgttcccg
    31681 aacacaacgt ttttcattac cacgcattct tctttagtca tcagtcagtt agagcaggga
    31741 ggggcctatc gtttggtacg tagcaaggag gacggtgtag tctatggcaa gatgattgac
    31801 tatccaagta atgcttcttt tgtggatttg ctcaacgaag cattcggcgt ggatttgaat
    31861 aagaagaaga tagaacgcgc ccaagaacgt aatcaagaac aggcaaaaaa gccttattgg
    31921 aattggtacg tcaggaattg ggcggattag gagataaata atgacggttt atcttttaga
    31981 taccaattac ttggtttatt tggcggatga tgacagtgac gaagaaaagc ggaaagccgt
    32041 attgagcgat atggcggaaa agttgcagca ggatgacaac cgttttgtga ttaccccgct
    32101 tatccgttat gaagttttgc gcggtgtgga ttggggaaaa tctgaaaaat tgtctcgatt
    32161 gaccggtgtt ttggcacagt tttagtcttt ggacattaca cagaatgttt ctgatttggc
    32221 aagtaatctg taccgttttg ataagtttga agccgaacgt gataacacgc cgaagaattt
    32281 agaaaaacgt aaattcgata tgtttcatta tgcgactgcc agtgtgaata atttagaaat
    32341 cttatcccac gataccgatg ttaataagat taaagattta catgaaagaa tgaggctgga
    32401 agattcggca gaattagctt gagacaaata gcagaaacct gaacaaacct ttttcagacg
    32461 gcctcttaaa acgtcgtctg acaaaccaac ccgtacaacg atatttttat tttaaccaca
    32521 ggttaaccac tatgttttcc aactacctac tcagcttggc aatatggata cccatcgccg
    32581 caggcgtgct ggttttggcg accggtaaag acagccgtgc gccgctggcg cgtgtgcttg
    32641 ccttcatggg agcgcttgcc ggtttcttgg taacgctgcc cctgtttacc ggtttcgacc
    32701 gtttgagcgg cggctatcaa tttaccgagt tccacgagtg gattccgctt ctgaaaatca
    32761 actacgcatt gggcgtggac ggtatttcag tgctctttat catcttgaat gcgtttatta
    32821 cgctgctggt ggtattggcc ggttgggaag tcattcagaa acgtccggcg cagtatatgg
    32881 cggcattcct gatgatgtcg ggtttgatta acggcgcgtt tgccgcgcag gatgcgattc
    32941 tgttttatgt gttcttcgag ggtatgctga ttccgctgta cctgattatc ggtgtatggg
    33001 gcggcccgcg ccgcgtctat gcgtcggtca agctgttcct ctatacgctg acgggttcgc
    33061 tcttgatgtt ggttgccatg gtttacctgt actatcagac aggcagcttc tctattgtcg
    33121 atttccaaaa catcaaacag attccgttgg gcgtacaaca gcttttgttt gtagcgttct
    33181 tcctgtcatt tgccgtaaaa gtgccgatgt tccccgtaca cacttggctg ccggatgccc
    33241 acgttgaagc gccgaccggc ggttcgatgg tgttggcggc aattacgctg aaactgggtg
    33301 cgtatggttt cttgcgcttt atcctgccga ttatgccgga cgcggctcgc tattttgccc
    33361 ccgtgatcat cgtattgagc ctgattgccg taatttatat cggtatggtg gccctggtgc
    33421 aaaccgatat gaagaaactg gtggcgtatt cgtccatcag ccatatgggt tttgtaacgc
    33481 ttgggatgtt tttgtttgtt gacgggcagt tggacgactg ggcgttgaaa ggcgcggtca
    33541 ttcagatgat ttcgcacggc ttcgtgtcgg cggcgatgtt tatgtgcatc ggtgtgatgt
    33601 acgaccgcct gcacacgcgc aatattgccg attacggcgg cgtggtcaat gtgatgccca
    33661 agtttgcggc gtttatgatg ttgttcggta tggcgaacgc cggcctgcct gcgacttccg
    33721 gcttcgtggg cgagtttatg gtggttatgg gcgcggtcaa agtgaatttc tgggtgggcg
    33781 cgctggcggc tatgacgttg atttacggcg cgtcttatac cctgtggatg tacaagcgcg
    33841 tgattttcgg cgcgattcac aatccgcacg ttgccgaaat gaaagacatc aattgccgcg
    33901 agtttgcgat tctggcggtt ttggcggttg ctgttttggg gatgggcctg tatccgaacg
    33961 catttatcga agtggtgcat caggcggcaa acgatttgat tgcccatgtg gcgcaaagca
    34021 agatttgagg tgtgtaaatg aattggtcag atttgaattt aatgcccgca ctgcccgaag
    34081 tcgcgctgct gtcgctgctg gtgttattgt tgccggcgga cttgtgggcc agtgatgaca
    34141 aatgccgttg gacgcattac ggcgcgttgg caacggtggc ggttacggcg gcggtgcagc
    34201 ttgccgtgtg ggaacagggc agcacgtctt cgttcaacgg gatgtatatt gcggacggta
    34261 tgtcgcgttt ggcaaaaatg gttttatatg ccttgacgtt tgtcctgttt gtctatgcca
    34321 agccctacaa ccaagtgcgc ggtattttca aaggcgagtt ttacaccctg tcgctgtttg
    34381 ccctcttggg catgagcgtg atggtgagcg cggggcattt tttaactgcc tatatcggtt
    34441 tggaactctt gtcgctcgcc ctttacgccc tgattgccct gcgccgcgat tccggttttg
    34501 ccgccgaagc cgccttgaaa tattttgttc tgggcgcgct ggcatccggc ctgctgctct
    34561 acggtatttc tatggtttac ggcgcaaccg gttcgctgga atttgccggc gtgctcgcct
    34621 cttccttcaa tgaagaagct aacgaatggc tgttgaaact gggtctggtg tttatcgtcg
    34681 tcgccgttgc gttcaaactc ggcgcggtac cgttccatat gtggatgccc gacgtgtatc
    34741 acggcgcgcc cacttctgtt accgccttgg tcggcactgc cccgaaaatc gccgccgtcg
    34801 ttttcgcttt ccgcatcctc gttaccgggc tgggaaccgt gcatcatgac tggtctctga
    34861 tgtttgccct gcttgccgcc gcctcgctgc tggtcggcaa ccttgccgcc atcatgcaga
    34921 ccaatatcaa acgtatgctc gcctattcca ccgtatcgca tacgggtttc atcctgttgg
    34981 cgtttatggc gggcgcggtc ggctttgcgg cgggcctcta ttacgccatt acctacgcgc
    35041 tgatggcggc ggcagggttc ggcgtgttga tggtgttgtc ggacggggac aacgagtgcg
    35101 aaaacatcag cgatttggca gggttgaacc aacaccgcgt atggcttgcc tttttgatgc
    35161 tgctggttat gttctctatg gcgggcattc cgccgctgat gggtttttac gccaaattcg
    35221 gcgtgattat ggcgcttttg aaacaaggct atgtatggtt gtcggtgttt gccgtcgtga
    35281 tgtcgctggt tggcgcgttc tactacctgc gcgtggtcaa agtcatgtat tttgacgaat
    35341 ccggccgcgc ccgtcccgcc gccggcggca acaatgccgc aaaatccctc ttaagcgtca
    35401 acgcgctgct gttggtgctg tggggcatta tgccgcaaac cgttatcgac tggtgcgcca
    35461 aggcgttgga gaacacgctg tgagccgccg caacggcagc cgtgtcagag gctgccgttt
    35521 ttgttaagat atgccgttcc gcaatgcagt tcagacggca tcgccgccga caatgcccaa
    35581 acagaaagcc catcatgacc gcatccatgt acatcctttt ggtcttggca ctcatctttg
    35641 ccaacgcccc cttcctcacg accagactgt tcggcgtggc cgcgctcaag cgcaaacatt
    35701 tcggacacca cctgatcgag ctggcggcag gtttcgcgct gaccgcctct cttgcctaca
    35761 tcctcgaatc ccgtgcggga gcggtacaca atcagggttg ggagttttac gccaccgtcg
    35821 tctgcctgta cctcattttc gccttcccgt gtttcgtgcg gcggtatttt tggcacacgc
    35881 gcaacaggga ataaacaagc aaacaagcat aggaatgccg tctgaaaccc tttcaggcgg
    35941 catttgtttc attcaagtgc aggccggcat cgctgtgccg gcacgtttca gtcggcgata
    36001 tacgccggtt ttaatatttg cgtgcgactg caaattctgc caactgccgc aggcgcaggg
    36061 ctttgtcgcc gaagggttcg agcagcgcga ctgcttcggc aaccagtttg tgtgcgtatg
    36121 agcgcgccgc ttccaagccc atcagtttca cataagtcgg cttgtcgttg tcggcatctt
    36181 tgcccgccgt cttgcccaaa gtcgccgtgt ccgcttcaca atccaacaca tcgtcgatga
    36241 cttggaacgc caaacccagt tttgccgcgt aagcgtccaa tacggcaagt tccgcgtcgg
    36301 acagatcggg acacgccgtc gcccccaata aaaccgccgc acggatcaac gcccccgttt
    36361 tcaggctgtg catccgttcc aaatcggctt gaaccatttg tttgccgaca tttgccaaat
    36421 cgattgcctg tccgcccgcc atacccgcgc tgccgcccgt ttttgccaac accgacaaca
    36481 ttgccaactg gcgtgcggcg ggcagttctg tcggacggct caacacgtcg aaggcttggg
    36541 tttgtaaagc gtcgccggtc agaagggcgg tggcttcgcc atatttgatg tggcaggtcg
    36601 gtttgccgcg ccgcaggctg tcgttgtcca tcgccggcat atcgtcgtga accaaagaat
    36661 agacgtggat catttcgatt gccgccattg cctgtccgac cgcatccgcc acggccccgc
    36721 ccaattccga agccgccagc accagcatcg ggcgcagacg cttgccgccg tccaaagccg
    36781 catagcgcat cgcttcgtgc agcgtgtgcg ggatttcgtt tccagacggc aaaaagcgtt
    36841 ccagcagcag ctctgtctgc gcctgcgccc tctgttgcca cgctttcaaa tcattcgtcg
    36901 gattcaaggt tcaactcctt cgtcccgtcc gcatccaaaa cctgtaattt ttgttcgact
    36961 tgggccagct tggtttggca gtacctgacc agctcgttgc cttcctgata ggcggcaagc
    37021 gcgtcttcca agggcatttc gccctgcatg gactgcgtca gcgattcaag gcgcgacaag
    37081 gcctcttcaa acgatttcgg ggtgtttttc ttcatagttt cgggtgttcc ggtaaaaagc
    37141 ggattgtagc atttttgcaa aacggatgcc gtctgaaacc cgaatccggc ttcagacggc
    37201 attttttccg ccccggtcgg caaggcgtta cccgagcagt tcgtcggtga tgccctgcaa
    37261 aaaggcgagg cgttcggggc ttgccgcccc ggtttcggca gcggctttga aggcgcagcc
    37321 gggttcggcg cggtgggtgc agttgtggaa gcggcattgc ccgacaaggt ggcggaaatc
    37381 ggggaaatag tgcggcaaat cggcggcttg gaggtggtgt aaaccaaatt cttgcaaacc
    37441 cggggagtcg atgagttggg tttcgccgtt caaatcataa agccgggcgt gggtggtggt
    37501 gtgttttccc gagtcgagtg cggcggaaat gtcgccggtg cgggcggttt ggctgcctaa
    37561 aagggcgttg gtcagggtgg atttgcccat accgctttgt ccgagcagga tgttgctgtg
    37621 cccttgcagg acggggcgca ggctgtcggc gttttccagc acgcgggttt cgatgacggg
    37681 gtaacccagc gtttcgtaga atttgagttt ttcgagccag agggcggttt cgggcaggtc
    37741 ggctttgttc aggacgatga cggcgcggat gtcggcggct tcggcggcaa gcagggcgcg
    37801 ctgtagcagc cgcacgctcg gactcgggac ggcggcggtt acgatgagga gttgggtaac
    37861 gttggcggcg atgagtttgg ttttccacgc gtcttggcgg tagagcaggc tttggcgcgg
    37921 taaaaaatct tcaatcacaa cttgttcggc gttgacgggg ctgatgcgga cgcggtcgcc
    37981 gcaggcgaaa tcgacgcgtt ttttgcgggt gctggcttcg taggttgtgc cgtcgggcgt
    38041 gcggacgatg tagcggcggc cgtagccggc ggtaatttgg gcggtgtcgt tcatggtttc
    38101 tttggggttg ggtgtggaaa tgccgtctga aaaggggtgt tcggacggca tcggttcagt
    38161 cgtgctgcca ctcgacgtgt tcgctgagga agccgccgct ctggtgcgcc cagagtttgg
    38221 cgtaaagccc gcgtttttcg aggagttcgg cgtgtgtgcc ttcttcgatg atgcggcctt
    38281 tgtcgaggac gacgagcctg tccatcgcgg caatggtgga gaggcggtgg gcgatggcga
    38341 tgacggtttt gccttccatc attttgtcga ggctttcttg gatggcggct tcaacttcgg
    38401 aatcgagcgc gctggtggct tcgtcaagca gcaggatggg tgcgtctttg agcatcacgc
    38461 gggcgatggc gatgcgctgg cgttgtccgc cggagagttt cacgccgcgt tcgccgacgt
    38521 gcgcgtcgta gccgctccgc cctttggcat cggaaaggtc ggggatgaag ccggcggctt
    38581 cggcgcgttc ggcggcggaa accatttcgg catcggtcgc gtcggggcgg ccgtaaataa
    38641 tgttgtcgcg cacggaacgg tgcagcagcg aggtatcttg tgtgaccaaa ccgatttggg
    38701 cgcgtaaaga ttcttgggta acgccgctta tgtcctgccc gtcgatcgaa accgtgccgc
    38761 tttgcggttc gtagaaacgc aaaagcaggt tgacgatggt ggatttgccc gcgccgctgc
    38821 gtccgatcaa gccgactttt tcgccgggtt tgatattcag gttaaagccg ttgagcagcg
    38881 gtttgccggc ttcgtagcaa aaatcgacgt gttcgaactt gattgcgcct tgcggcacgt
    38941 tcagcggcag ggcttggggc ttgtcgagga tggtgtgcgg tttggacagg gtcgccatgc
    39001 cgtcgttgac gatgccgatg ttttcaaaca gccgcgcgga ttcccacata atgtattgcg
    39061 acagcccgtt gacgcgcaac gccatcgcgg tggcggtggc gaccgcaccc acgccgacct
    39121 gtccgttgtg ccaaagccag atgcccagtg cggcggcgga gagggtcagc gaagtgttga
    39181 cgatgaagct gcacgaatgc agcagagtcg ccagccgcat ttgggcgcgc accgtaacca
    39241 taaattcttc catcgactgc ttggcataga cggcttcgcg cgcgccgtgg aaaaagagtt
    39301 tgacggtggc gatattggaa taggcatcgg taatgcggcc ggtcatcagc gagcgggcat
    39361 tcgcctgccg tgcggcggtt tgccccaatc tgggaatcag caggcgcatt accgaagcga
    39421 aaccgattat ccagccgata aagggcagca gcagccatga gtcgagcgag gcgagaatca
    39481 cgcccgaagt gatgaaatac accgacacat aaacgaccat atcggcaacc gtcatcaccg
    39541 cgtcgcgcaa cgccagcgcg gtctgcatga ctttggcgga cacgcggccg gcaaattcgt
    39601 cctgataaaa accgaggctc tggttcagca tcaggcggtg gaagttccag cgcaggcgca
    39661 tagggaacac gccctgaagg gtttgcaggc gcacgttgga cgcggcaaac gcccacacga
    39721 ccgaaaacac catcatcgcc gccattgccg ccagttccca acctttttcg gcaaacagtt
    39781 cggcgggcgc gtatttgccg agccactcta cgattttgcc cataaattga aaaatcaggg
    39841 cttccataat gccgatgccg gcggtcagcg cagctagggc ggctatccat ttccgcaccc
    39901 cgtccatact gctccagaca aaccggcaca agcctttttc gggcgttttc ggcgcggctt
    39961 cggggtaggg gtcgattcgg gactcgaacc aggaaaatat tttgttcaac attgttttcg
    40021 atttcggtaa aacagtttca gacggcatca aacacaatgc cgtccgaaag gagggacaat
    40081 aacgccattt tacgggaaaa gccgtcggga agacagcgcg gggcggaaac gcagggtttc
    40141 gtcagggcaa acgccgcgcc gccttcggac ggcattattt cagcaggttt ttcagggcaa
    40201 ggcgcacgcc ttcgcccacg tccgtcccct tcggaacgcc tttgaccgcc gcttttgcct
    40261 cgcgttcgtt gtaacccagc gcaagcagcg tgctgacgat gtcttccgtt tcgtcggcgg
    40321 cgggtgaggc ggcaaacagc ctgtccgtta ccgtatgcgc gaccagcttg ccgcgcagtt
    40381 ccaagaccat acgttcggcg gtttttttgc cgattcccgg agcggaggag aggcgtttga
    40441 catcttcttc tgcaaccgcc cgcgccagct cgtctgccgt catcgccgac aaaatgccca
    40501 aagccgtttt cgcgccgatg ccgccgacct taatcagttg gcggaaggtc ttgcgttctt
    40561 ccgcagtggc aaaaccaaat aaaagatgtg cgtcttcccg aatgataagc tgggtaaaca
    40621 gttgtacgct ttcacccacg ggcggcaggt tgtagaaggt ctgcatcgat acgtcggctt
    40681 cataaccgac accgttgaca tcgatgacga tttgcggagg gtttttttca accagtttgc
    40741 cggtcagtct gctgatcatg tgtgccgaat cctgaagtgt cgggtgcaaa atgccgtctg
    40801 aaaccggttc gggctccaga cggcacggat tgtatcaaat tcagtcgtcg cggcgggagg
    40861 aaatcacgcg gccggtacgg gcatcgacaa cgactttgta ttcctgtccg tttttgacga
    40921 tttcgacatc atagtgcgga cggccgtcgt cgtgttcgag atcgatgtcg gtgattttgc
    40981 cgccgacacg cgcccaagcc gctttttcgg cttgggcgcg gctgatgatt ttgtcttgtt
    41041 tgccgtgttg gtgtgcggcg tgtccgtggt cgtcatcgcc gtgtccgtcg tggtgggcga
    41101 gtgcgggggc ggaaatgccc aacagtgcgg ttgcggcggc ggtcaagaga aggtgtttga
    41161 tgttcatatt tgcccttgta aatcaggggt tgaaaaatgg ggatattaat aaggtatcga
    41221 ataaccgtca accggaggtc agtaccgccc gaaccatacc gcgtgcctgc gcttcggctt
    41281 cggcggcgcg ttcctgcgag gcaaacgggc ccattttgac aacgtattcg taacggcgtt
    41341 tttcaaccga gaggttcggg cttgatgacg aagcggcgaa attttgggcg gcttggttca
    41401 gataggcttg tgcttcgtgt tccgtaccga aagatttcaa gtcgataaag atgtctttgt
    41461 tttcggcaac cggtgcggat tggcccggga cgatttgttc gattttgacg tgtgccgtcc
    41521 cttggctgac aaagcccaat ttttgcgcgg cggctttgga tacgtcgatg atgcggttgc
    41581 cgtggaaggg gccgcggtcg ttgacgcgga cgatgacgct tttgccgttt ttggtgttgg
    41641 ttacgcgcac atggctgggg atgggcaggg ttttgtgggc ggcggtaaag gcgttcatat
    41701 cgtagcggtc tccgccggaa gttttgcgcc cgtgaaacct gccgccgtac cacgaggcgt
    41761 tgccggtttg cgtgaattcg gcgactttgt agctgcggtt ggcggaggcg tgcagttttt
    41821 ccgccttgac cactgcgtcg gcggatgccg tctgaaggga gtgtgtgccg aacgcggcgg
    41881 tgaggaggaa aagggttttt cgggttaaag tcaaaatgtg ttccgttctt gagttgaaga
    41941 cggatgggca ttatgcccta cggacgcgtt ccgaaccgcc gcacgctgcg gcagcggttc
    42001 ggaatgtgtc cgaacggttt tcagacggca tgaacctgcg ttcaaacgcc gcctgcgtaa
    42061 ccgtgttgcc gccacgcttc aaagagaatc acggagacgg tgttggaaag gttcatactc
    42121 cggctgccgg gccgcatcgg caggcggatt ttttgcgcgg cgggcaggct gtcgaggatg
    42181 tcggcaggca gcccgcgcgt ttccggcccg aacagtaaaa cgtcgccttt ttgaaacgcg
    42241 gtttcatcgg ggcgcgccgt gcctttggtg gtcagggcga aaatacgtcg gcctgccagc
    42301 gacttgaggc agtcgtcgaa gttttcgtgc accgtcaggc tggcgaattc gtggtagtcg
    42361 agcccggcgc gtttcatttt ggcggaatcc aatgggaagc cgagcggttt gacaaggtgc
    42421 aaatccgcgc cggtattggc gcacaggcgg atgatgttgc ccgtgttcgg ggggatttcc
    42481 ggctgatata aaacgatggt aagcataaat atcaatcact tataggcgcg taaccttgcc
    42541 ataaggcgga tggggtgtca aaaaatttag ttattttttc attggcgtgc gtgccagcgt
    42601 ccagcagcag attcggtttg cgcccgattt tttcagcgtc tttgccaatt cgtccagcgt
    42661 cgcgccggtg gtaaagacat cgtcgattaa caaaatatta cagttttccg gtatcggtgt
    42721 gcggatttca aaggcgtttt tgatgtttcg ccgccgttcg ccgcctttga gcgtgctttg
    42781 cggcgggcgg tggtgtcgga atacggtgtg tcggggcagt atctgccagc cgtagcgttg
    42841 cgccaacaac ccgacgatgc tctcgctttg gttgaacccg cgttgcagca gccgctccct
    42901 gcttagcgga acgggtagga cgaaatcgaa acattcgtct gaaagccggt cgggcggatt
    42961 ctgcatcgtc aggtctgcca gcggctgcgc catgcccaaa tcagccaagt gcttcagcgc
    43021 gcgtatcata ttgctgacgg gcggttcgta atgcagcgat gcccacatcc ggtcgaatgc
    43081 gggcggtttt ttctgacatc cgccgcacac cgcgccgcct tgaacgtgcc tgaaacacag
    43141 gggacagctg tttgccgcgt cggtgcggaa acttgccaaa tcggtattgc agccggcgca
    43201 gatgccgtct gaaacgccgg acgaaccgtg gcataatacg caacgcctga tagtgggcgc
    43261 gtctgcgatg cgccgccaac aagagagaaa attcatgcct gatgctgcca aaaaagttta
    43321 cctgatacac ggttgggggg cgaaccgcca cgcgttcgac gatttgatgc cgcgcctgcc
    43381 cgcaacgtgg ccggtgtccg ccgtcgattt gcccggacac ggggacgcgc ccttcgcgca
    43441 acccttcgat attgaggcag ctgccgacgg cattgccgct caaatcgata cgtcggccga
    43501 cattctcggc tggtcactcg gcggattggt cgcgctgtat ctggcggcgc gccatcccga
    43561 caaagtccgt tcgctctgcc tgacggcgag tttcgcacgg ctgacggctg ccgaagacta
    43621 tcccgaaggg cttgccgcgc ctgcactggg caaaatggtc ggcgcgttcc gaacggatta
    43681 tgccaaacat atcaaacagt ttctacaact ccagcttctg cacacgcctg atgccgccga
    43741 aatcatcggc agaatcctgc ccgatttggc gcgctgcggc acgcctcaag ccttacagga
    43801 agctttggac gcggcggaaa gggcggatgt gcggcatttg ttggacaaga tagatgttcc
    43861 ggtactgctg gtgttcggcg gcaaagacgc gattacaccg ccgcgtatgg gcgagtatct
    43921 gcatcggcat ttgaaaggaa gcaggctggt tgtgatggaa aaggcggcac acgcgccgtt
    43981 tttgagccat gcggaagtgt ttgccgcgct gtaccgcgac tttgtcgaag ggggtttgac
    44041 atgaatccgc aggacaaatg ctggcaggtt caccgccatc ttgccgaaca taccgaccaa
    44101 cgcctgacac tcgtccgcaa cgcgcccggg catatcctgc ttgccggtgc ggatgcggac
    44161 atcagccgca gcctgttggc gaagcgctat ccgctggcgg tatttgaaga atacgattcc
    44221 cgtgcggatt ttttggcggc tgccgcagcc gcgcgcaagg gcggtttctg gcaaaaactg
    44281 acgggcaggg gcgtggtgca gcactgccaa tccccgaccg tgccgctgcc cgaagcgtgt
    44341 gccgatatgt tgtggtcgaa cctcggactg ttggcggcgg aacaaatcct tcccgtgctg
    44401 cacaactggg cgcgcgcgct gaagacggac gggctgctgt ttttcacctg cttcgggcgc
    44461 gataccttgg cggaactgaa atcccgtctg aaagaaaacg gcattgaaag ccgcagcgtg
    44521 atgtttcccg atatgcacga cttggccgat atgctcgccg aaaacggctt ttacgatcca
    44581 gttaccgata cggcgaagct ggtgttggac tacaaaaagg cggaaacgtt ttgggcggat
    44641 atggacacgc tgggcgtttg gcgggcggtg gcgtgggacg acgaaaacgc cgcgcgttcg
    44701 tgtgccgggg cgatatttga acgggaaggc ggtttgggca ttacgctgga aacggtgtac
    44761 ggacacgccg tgaaaaaact ggtgctgccg cagggggaga acgtggtgcg tttttttccg
    44821 aagagatgat gtgcagatga cgtctgaagc cgtttccaag tttcagacgg catttgtctg
    44881 tgaaaaccga cagaaataaa ggaaatgccg atgtatagtg aattaaattt aaaccggtac
    44941 ggcgttggct cgccttgccg tactatctgt actgtccgcg gcttcgccgc cttgtcctga
    45001 tttaaattta atccactatg tgccgatgcc ggagacgtat attgcgtcta taacatcaga
    45061 ctgaagcagt acactgcctg ccaggttacc cgagttgaag aacacggtgg caaaaaaaca
    45121 catgcgaccc tgctggcttt ggactggcgg ggcaacaaac cgcttggggc ggcggagctg
    45181 gcggatttga aaccgcttta caaagacttt atgtattggg aacgcggtct gcacatgtat
    45241 aaggcaagtg ccgtcgtgcc gacgggatat gtacgggttg ggaataccgc gccgctgtgc
    45301 ggcgaagaca cgcagcggta tgcctctttt tggggcgacg gctacgacgt gtaccgtcag
    45361 ttgagatggc ggcagatacc cgaaaaacag agaaaggcat tcaaaaaagc cgccaaaagc
    45421 aaaaataccg tgatgtttgc cggacgggaa tacggcatat ccaaacagaa tttgagcgat
    45481 gtttgggatg attttgaaga cgcgatggaa ctgaaggcgt ttccctgcct gtcttcgctg
    45541 tttctgacca agtggcataa aaatctatat gaatatctgg aggaatatcc gtttatcacc
    45601 cgattgtgtc tggaaaacca cggtcagacc gtgctggatt tcagcaatac gcgcataacc
    45661 gacctttctg tcgatatgac cggcgtggaa tcgctttatc tgaacgaagg cttggacagc
    45721 ctgaacctga aaggcgaaat caaggaaaac tgcaaggtct gtaccgccgg aaagggcgcg
    45781 ggtctgattt tggaagtggg caaaagcgtt cccaaagtgc ggggtttgga aaacctgacc
    45841 gccgtcaacg tcatgggcat tgccgatttc gatatgcaaa acctgtcgga aacgtatccc
    45901 aagctcaaaa ccatacggct gtggggcaaa ccgggcaata tcgccaattt ttccgccgta
    45961 tcgggatttg aggatttgga agtgttcact gccgtagatt tgttcggttt cggcgcggac
    46021 gacatccctc atcccgaccg gctgccgaag ctgcacaggc tgtggatgag cagcctgccc
    46081 gaagaggcgg cgaaggcagt gaagaaactt tataagaaac ggaaggaaga cgggctggac
    46141 ctgtggatag aaaaagcccg aaaacccgaa tggctggcgc aaaatttcga caaccccttc
    46201 cgcgattggg acggcgcgga gcatatcccg aaaagccatg ccaaaaaagc ggcggagctg
    46261 taccggaaaa cccgtgccgg cgtggtcaaa ctgctcggca atccgcctga aaacacaggg
    46321 gaggggctgg cagaggcggt caaagcctat accggaggtt tcaacaaaat ggacaaaaaa
    46381 cactttatcg acacggtaga gcgggaagat attgccgagg cgttggaaac gatattggac
    46441 ctgataccgg atgggtcttg tgccgacaag gaaaaactgt ttgaaatatt tgataaaaac
    46501 aggaattttt aaacagaggc aatgccgtct gaaacttggt aacgggcttc agacggcatc
    46561 ccgttccaac accgccaaca ccgccgcacc gtaacgtgcg gctttttctt cgcctacgcc
    46621 gtatacggcg gcaagctccg ccaaaccttc cggctgtttg gcggcaatgg cgcgcagggc
    46681 ggctttgctg agaatgcggt agggttcgga ctgttcgtgt tttgcggttt cgttgcacca
    46741 ttgaatcagg gcgcgcatca ggcagcgttt gtgtttggcg gtttcatcga tgccgtctga
    46801 aaacggacgg cagacggcga ggatgtcccg tccgtatttg gcggcgcgta cgctgcccaa
    46861 gccgtgtacg gcttcgaggt cggtttcggt ttcgggcgtg gcggcaagca tatcggcaag
    46921 gctttcgtcg gagaggacgg tatgcagggc gcagttttcc gcccttgcct gttcataccg
    46981 ccaggcttcg agtttttgac gcagttgttg ttcgcgttcg gtttgcggac ggatgacggc
    47041 atcgtggcta aagtcggcag cgttttggca gactttgagt atgccgtgtc cgaaacgttc
    47101 ggttttggct tcgcccaagc cgtagatgtc gtgcagcccg ttgaggtttt gcggcatttt
    47161 ttcgacaagg tcgcgcaggg ttttgtcgcc gaaaatcata taggcgggga tgccttcggc
    47221 ttcagcctgt ttcatgcgcc aaacgcgcaa tgcctgccac aggcgttctt cgcgttcggt
    47281 acgcagccag ttgtctttga gggtgcgggt ggcgggcttg tcgcgcttga gcgggcgcag
    47341 catcacttcg gtttcgcctt tgaggacttt tttggcggct tcggtcagtt gcaatgcctg
    47401 atatcgggca atgttgacgg tgaggtagcc gaggctgatg cactggcgga tgacgctgcg
    47461 ccattctttg tcggacaatt ccgcgccgat gccgaatgtg gacagttgct cgtgccggtt
    47521 gccgcgtatc caatcgtcgc ttttgccgcg caaaaggttg gtgatgtaac cggcggcaaa
    47581 gcgttgtccg gcgcggtaca cgcagctgag taatttttgc accaacaccg tgccgtcaaa
    47641 ccgtacgggc ggatgcaggc agttgtcaca atgtccgcag ggttcggatg cttcgccgaa
    47701 atgtttgagc agcagtacgc ggcggcaggc ggcggtttcg cagacggaaa gcatggcatc
    47761 gagtttttgc atttcgattt gcttttgcac ctcgtcgctg ttgccttcgg caatccgttc
    47821 gcgcagcaac acccaatcgt tcaagccgta acacagccaa ctcacggcag gcagcccgtc
    47881 ccggccggcg cgccctgatt cctgatagaa atgttcgaca ctctggggca tatcgagatg
    47941 ggcgacaaag cgcacgtcgg gtttgtctat gcccatgccg aacgccacgg tcgccaccac
    48001 gataatattg tcttcatgcg taaagcggcg ttggttttcc tcgcgcacgt ccatgctcaa
    48061 accggcatga tacggaatcg cgtttaatcc gttttcacgc aaaaactgcg ccgcatcttc
    48121 aacctttttg cggcttaggc aatacacaat gccgctttgc cccgtcattt ctttgcggat
    48181 gaaatccagc aattgttttt tgccgttgtt tttttcgata acctgataat aaatattcgt
    48241 gcggtcaaag ctggagacaa attcggacgc gtcgtccaag tgcagataat gcttgatgtc
    48301 ggcgcgcgtg gcggcatcgg cggtggcggt cagggcgatg cgcgggatgt tcggatagcg
    48361 ttcggcaagc ataccgagct gttgatattc ggggcggaaa tcgtgtcccc accggctgac
    48421 gcagtgcgct tcgtcaatgg cgaacaggct gacggtttgt tggtcgagaa aacgtaaaaa
    48481 gcggtcggta accaagcgtt ccggcgcgac ataaagcagc ttcagacggc cttgggcaag
    48541 cttgtcggca atctcgcgcg cctcatctgc cgatgtgccg ctgttgactg ccgccgcttc
    48601 aatcccggcc acatgcaggc tggccacttg gtcgttcatc agcgcaatca gcggcgatac
    48661 gacaaccgcc acgccttcgc gcatcagcgc cggaatctgg taacacaaag acttgccccc
    48721 gcccgtcggc atcagcaccg tcaaactgcc gccgcctgcc aaagtattga tgacatcctc
    48781 ctgcctgccg cgaaattcgg gatagccgaa tacttcgtgc aaaatctgtc tggcggtggg
    48841 tcggtgcgtc attgttccgt gtccggtaag ggtgttggtc ggtcggcggc aatatgccgt
    48901 ctgaaatcgg gattttagaa gagtttgccc acttccgccc caatatcgtc ggcacgcata
    48961 aacgtttcgc cgatcaggaa ggtatgcacg ccgcgcgccc gcataaattc cacatccgcc
    49021 ttgcctgtaa tgccgctttc ggtaacgacg gttttgcctt ccagcgcggg cagcagcgac
    49081 agggtttggt cgagggagac ttcaaaagtc cgcaggttgc ggttgtttac gccccgcaac
    49141 ggcgtggtca ggttgcggca tttttccaat tcggtttcgt cgtgcagctc gagcaggacg
    49201 gtcatgccca attcgtgcgc cagcgcctca aagcgttcca attgtccctg ttccagtgcg
    49261 gcggcaatca gcaggacggc atccgccccc catgcgcgcg cctgataaac ctggtattcg
    49321 tcgatgatga agtctttgcg cagcacgggc agcaatacgg cttcgcgcgc ctgtttgagg
    49381 tattcgggcg aaccttggaa atagggttcg tcggtcagta ccgacaaaca cgccgccccg
    49441 gcgttttcat aggcgcgggc aatctcggca gggcggaagt cggggcggat taaccctttg
    49501 ctcgggcttg cctttttgat ttcggcaatg acggcgggca ggtttaggcg gtgtttgccg
    49561 cgtatcgaat cgatgaagct gcggacgggc gcggcttctg cggcaagtgc gcggatgtgt
    49621 tcggcgttga cggcggcttt ttgggcggca acttcctgtg ccttggtggc aaggatttta
    49681 ttgaggatgt cggtcatgtc gtgttccgta tttgtccggg gaaaggggga atattagcat
    49741 caaaccgtta acgcctgttt gtgcggaagc tgtcaaaata ggacaggacg gtctgcggca
    49801 gccattgcag gtgcagcctg ccgccggtgc tgctgacaaa gccggcgtgc ccgccgtgtg
    49861 caggttggaa cagggtaacg gcttcggaca cttcgtccgc acggggcagg gcttcgggcg
    49921 gcaggaaggg gtcgttggcg gcattgagca ggagcagcgg tttggcaacg tgtttgagca
    49981 gcggtttgca ggaagtttgg cggtagtagt cgtgccggtc ggcaaagccg tgcagcggtg
    50041 cggtgaaacg gtcgtcaaac tcgcccagtg ttttgcaccc tgcggcaaat gccgtctgaa
    50101 aaccttggag cgaacgtgct ttgggtatca gtgtgcggag gaagtagcgc gtgtagagca
    50161 gccgcgtgat gccgctgtcg aagcggctgc ctgccgcctc tgcatcaacg ggggcggata
    50221 cggcggccga ggcgtgcggc aatgcctttt tgccctgttc gcccaaatat tttgccggcg
    50281 cgttgccgcc cagcgatacg ccgacggcgt atatttcacg gtaacgcgcg gtgagcgtgt
    50341 ccaaagcaaa ggcgatttcg gcggtatcac ccaagtggta gaacaccggg gcggtgttcg
    50401 ctacgccgcc gcagctgcgg aaatggacga ctgcgccgtg ccaaccccga ttgcgtaccg
    50461 cgagcatcag ttcggccgcg taatggctgc ggctgcttcc ttccaaaccg tgaaacagca
    50521 cgaccagcgg cgcatcgggc gaaatgccgc ctgaaaagtc gtaggcggtt ttggttttac
    50581 ccgtgctgtc gggaagcatc tcgcggcggt atgcgggtgc ggggtgttgc aggaatttgg
    50641 cggcaatcgt gtcggcattg ccgttgcgga ggaaaaaggg cgtgtccggc ggtgtcaaaa
    50701 tcataaggta tcggtttttc tgttttcaga cggcattggt gatgcggcag cccgtccggc
    50761 cggtgcggac gcgggcgatg cgcgcccgga tataggcgcg gaaaaagcgt tttccgaaaa
    50821 aggatatcgg catcggtcag ctttccacgc gtttgaaatg gcgcggacgg aagcccaaag
    50881 ccgccagaga tgcgaaatac agtccgccgc cgacggcaat caggatgcag agctgccccg
    50941 ctttccgcat tccgccggcg tgcgcccatt cgaacggcag gcaagcctgc gccgcccaca
    51001 gtccgccgca catcacggcg agcgcgagca gcattttcgc caagaacgcc gcccaacccc
    51061 tgccgggccg gtaaataccg tgtttgcgca acaggaagaa caacaatccg gcgttgatgc
    51121 acgcgcccag gccgatggcg agcgaaagcc cggcgtgttt caacggaccg ataaaggcga
    51181 ggttcatcaa ctgcgtgcag atgagcgtga agatggcgat tttgacgggc gttttgatgt
    51241 tttgccgcgc ataaaagccg gatgccaaca ctttgatcat aattaaaccg attaaaccga
    51301 aagaataggc aatcagcgcg tgttgcgtca tttgtgcgtc aaacagcgtg aattctcggt
    51361 acataaacag cgtcgccacc agcgggaacg acaataccgc cagtccggcc gccgccggca
    51421 gcgtcagcag catgcacagg cgcaaacccc agtcgagcag ggcggaaaac tgttccgtat
    51481 cttggtttgc cgagtgtttg gacaaagtcg gcagcaaaat tgtaccgagt gcagccccca
    51541 gcacgccgcc gggcagctcc atcatgcggt cggcgtaata catccatgaa acgctgcccg
    51601 attgcagata agacgcgaaa atcgtgttga taaccaaaga aatttgcgcc acgctcacgc
    51661 ccaaaatcgc aggcaccatc tgtttcatga cgcggttgac cgccgcatct ttgaaattca
    51721 gtttgggcag tttcaaaaag cccagtttcg ccagccacgg cagttggaaa ccgagctgca
    51781 aaataccgcc gacaaaaacc gcccacgcca gcgcggtaac gggcggatcg aaatacggca
    51841 cgaaaaacag tgcgaatacg ataaaagaga tgtttaaaaa cgtgggcgta aacgcgggaa
    51901 tgccgaactt atggtaggaa ttgagtatcg agccgacaaa agaagacaaa gaaatcaata
    51961 atatataagg aaacgtaatc cgcagcaggc tgatggaaag ttggaacttg tccgcgtctt
    52021 tggtaaagcc gggcgcggaa acataaatca cccaaggcgc ggcaagtatg cccagcgcgg
    52081 taacgacgat cagcacaaac gacagcattc ccgcaacgtg gcggataaaa gcctccgtcg
    52141 cctctttaga acgcgtttcc ttatattccg ccaaaatcgg cacaaacgct tgggcaaacg
    52201 ccccctccgc aaacacgcgg cgaagcaggt tgggcagttt gaacgcgaca aaaaacgcat
    52261 ccgtcgccat acccgcgccg aatgcccgcg caatgaccgt atcgcgcaca aatcccaaaa
    52321 cgcgcgacac catcgtcagg ctgccgactt ttgccaaagc tccaagcata ttcatcgtgt
    52381 ttccttttcg gttgaaaccc cgccctttag ggcggcagga tcagacttta tagtggatta
    52441 acaaaaatca ggacaaggcg gcgaagccgc agacagtaca aatagtacgg caaggcgagg
    52501 caacgccgta ccggtttttg ttaatccact atatttgaaa ggggtgtaac ccttccaaat
    52561 cagggcaacg catagggcgg tgctttatgt gccgtcctgt gtgttgaaac atcattgttc
    52621 cccaacagcc gtatccgtcc ggggcggcgc gtattgtacg acagaaaccg cttcggatgg
    52681 catcgggttt gatgccgtct gaagcggttt cccgaaacga aaacgtcctt tttcggcggc
    52741 aaactgtatc aacacgcgaa aatacaataa aataccaata tccgatttat ttccaacatc
    52801 acggagagcc gtatgaaatc cagacacctc gccctcggcg ttgccgccct gttcgccctt
    52861 gccgcgtgcg acagcaaagt ccaaaccagc gtccccgccg acagcgcgcc tgccgcttcg
    52921 gcagccgccg ccccggcagg actggtcgaa gggcaaaact acaccgtcct tgccaacccg
    52981 attccccaac agcaggcagg caaggttgaa gtgcttgagt ttttcggcta tttttgtccg
    53041 cactgcgccc gcctcgaacc tgttttgagc aaacacgcca agtcttttaa agacgatatg
    53101 tacctgcgta ccgaacacgt cgtctggcag aaagaaatgc tgccgctggc acgcctcgcc
    53161 gccgccgtcg atatggctgc cgccgaaagc aaagatgtgg cgaacagcca tattttcgat
    53221 gcgatggtca accaaaaaat caagctgcaa gagccggaag tcctcaaaaa atggctgggc
    53281 gaacaaaccg cctttgacgg caaaaaagtc cttgccgcct acgaatcccc cgaaagtcag
    53341 gcgcgcgccg gcaaaatgca ggagctgacc gaaaccttcc aaatcgacgg tacgcccacg
    53401 gttatcgtcg gcggcaaata taaagttgaa tttgccgact gggagtccgg tatgaacacc
    53461 atcgaccttt tggcggacaa agtacgtgaa gaacaaaaag ccgcgcagta ggcccgtttg
    53521 aaaaatgccg tctgaaactt ggttttcaga cggcattttg attgggttta gaacgtaaag
    53581 cccgtttcca gttcttcatc gccgaccagt tcgaccaaga gcgcgtagag cggggcgagt
    53641 tcggcataac ggcgcgatac gcggcgcaga tagtttaaga aacgcgggat ttccggacgg
    53701 tatttgtctt tgccgtcgcg gtagtacagg cgtgcgaaga tgcccgcgac cttcaagtgc
    53761 cgctgcacgc ccatccattc gaaccggcgg taaaactcgt caaactcggc agggacaggc
    53821 aagccggcag cccgcgcctt ttcccagtag cggataacca aatccaaaac aaactcttct
    53881 tcccactcga taaaggcatc gcgcaacagc gacaccaaat cgtaggaaat cgggccgtaa
    53941 agcgcgtctt ggaagtctaa aacgcccggc ctgccgcgcg tcagcatcag gttgcggacg
    54001 ataaagtcgc ggtgcacgta gactttgggc tgcgccaaca agggcggcag cagcgtatcg
    54061 gcggtttgct gccaaagttg gcgttgtttg aatgttaatt cgcgccccaa ttcttttgcg
    54121 acaaaccatt ccgggaacag gttgatttcg cgcagcatcg tttcacggtc atattcgggc
    54181 aaaacccctt cacggcttgc cttctgcaat ccgaccagct cgccgatggc ctccagcaac
    54241 agggctttgt gtgccgcttc gccctgctcc tgaagcatcg cggtcaaaaa cgtcgtattg
    54301 cccaagtcgt tcaataccac aaaccccaaa tccgtgtccg cgtgcaatac ctgcggcaca
    54361 ttgaccatgt caaacagctt ctgcaccttc aaataaggcg cgacactcat cttgtcgggc
    54421 ggcgcatcca tacagacgac gctgccgccg tctgaaaacg ccgcacggaa atagcggcgg
    54481 aaatcagcat ccgccgccgc gaaggacaga tcgaagtccc gttcgggata aacggtctga
    54541 agccaatttt tcagttcggt ttgccgttgc ataacagtat ccgggcattt cgggttacaa
    54601 taaacactat tctaaccggt aaaccgactt gaggggcgat tttggctcgt ttattttcac
    54661 tcaaaccact ggtgctggca ttgggcttct gtttcggcac gcattgcgcc gccgataccg
    54721 ttgcggcgga agaggcggac gggcgtgtcg cagaaggcgg tgcgcagggc gcgtccgaat
    54781 ccgcacaagc ttccgatttg accctcggtt cgacctgcct gttttgcagt aacgaaagcg
    54841 gcagccccga gagaaccgaa gccgccgtcc aaggcagcgg cgaagcatcc gtccccgaag
    54901 actatacgcg cattgttgcc gacaggatgg aaggacagtc gcaggttaag gtgcgcgcgg
    54961 aaggaagcgt tatcatcgaa cgggacggcg cagtcctcaa taccgattgg gcggattacg
    55021 accagtcggg cgacaccgtt accgtaggcg accggttcgc cctccaacag gacggtacgc
    55081 tgattcgggg cgaaaccctg acctacaatc tcgatcagca gaccggcgaa gcgcacaacg
    55141 tccgtatgga aaccgaacaa ggcggacggc ggctgcaaag cgtcagccgc accgccgaaa
    55201 tgttgggcga agggcgttac aaactgacgg aaacccaatt caacacctgt tccgccggag
    55261 atgccggctg gtatgtcaag gccgcctctg tcgaagccga tcggggaaaa ggcataggcg
    55321 ttgccaaaca cgccgccttc gtgttcggcg gcgttcccct tttctatacg ccttgggcgg
    55381 acttcccgct tgacggcaac cgcaaaagcg gactgctcgt cccgtccgta tctgccggtt
    55441 cggacggcgt ttccctttcc gtcccctatt atttcaacct tgcccccaac ttcgatgcca
    55501 ctttcgcccc cggcattatc ggcgaacgcg gcgcgacgtt tgacggacaa atccgttacc
    55561 tgcgtcccga ttacagcgga cagaccgacc tgacctggtt gccgcacgat aagaaaagcg
    55621 gcaggaacaa ccgctatcag gcaaaatggc agcaccggca cgacatttcc gacacgcttc
    55681 aggcgggtgt cgatttcaac caagtctccg acagcggcta ctaccgcgac ttttacggcg
    55741 gcgaagaaat cgccggcaac gtcaacctca accgccgcgt atggctggat tatggcggca
    55801 gggcggcggg aggcagcctg aatgccggcc tttcggttca gaaataccag acgctggcaa
    55861 accaaagcgg ctacaaagac gaaccttacg ccatcatgcc ccgcctttct gccgattggc
    55921 ataaaaacgc aggcagggcg caaatcggcg tgtccgcaca atttacccgc ttcagccacg
    55981 acggccgcca agacggcagc cgactggtcg tgtatcccgg tatcaaatgg gatttcagca
    56041 acagctgggg ctacgtccgc cccaaactcg ggctgcacgc cacttattac agcctcgaca
    56101 gtttcggcgg caaagcatcc cgcagcgtcg ggcgcgtttt gcccgttgtc aatatcgacg
    56161 gcggcacaac cttcgaacgc aatacgcgcc tgttcggcgg cggagtcgtg caaaccatcg
    56221 agccgcgcct gttctacaac tatattcctg ccaaatctca aaacgacctg cccaatttcg
    56281 attcgtcgga aagcagcttc ggctacgggc agcttttccg cgaaaacctc tattacggca
    56341 acgaccgcat caacgccgcc aacagccttt ccaccgccgt gcagagccgt attttggacg
    56401 gcgcgacggg ggaggagcgt ttccgcgccg gtatcggtca gaaattctat ttcaaggatg
    56461 atgcggtgat gcttgacggc agcgtcggca aaaatccgcg cagccgttcc gactgggtgg
    56521 cattcgcctc cggcggcata ggcgggcgtt tcaccctcga cagcagcatc cactacaacc
    56581 aaaacgacaa acgcgccgaa cattacgccg tcggcgcagg ctaccgcccc gcccccggaa
    56641 aagtgttgaa cgcccgctac aaatacgggc gcaacgaaaa aatctacctg caggcggacg
    56701 gttcctattt ttacgacaaa ctcagccagc tcgacctgtc cgcacaatgg ccgctgacgc
    56761 gcaacctgtc tgccgtcgtc cgctacaact acggttttga agccaaaaaa ccgatagaaa
    56821 tgcttgccgg tgcagaatac aaaagcagtt gcggctgctg gggcgcgggc gtgtacgccc
    56881 aacgctacgt taccggcgaa aacacctaca aaaacgccgt ctttttttca cttcagttga
    56941 aagacctcag cagcgtcggc agaaaccccg caggcaggat ggatgtcgcc gttcccggct
    57001 acatccccgc ccactctctt tccgccggac gcaacaaacg gccctgaccg tcggaaaccc
    57061 ggcaggagca ccgttcctgc acaagatagc attccaccga caaccccaaa cccgccatca
    57121 aaggcaggat tcaaacgata aggaaagaat gatgaaaatc aaagccctga tgattgccgc
    57181 cgcattgctg gcagcagccg atgtccacgc cgcaccgcaa aaggcaaaaa ccgcgcccgc
    57241 caaagcggtc aaagctgccg ccacggcgca aaaagaagcc gcacccgcac aacagcaggg
    57301 cggtatccgc ttttcagacg gcattgccgc cgttgccgac aacgaagtca tcaccaaccg
    57361 ccggcttgcc gaagccgttg ccgaagccaa agccaccctg cccgaagacg cgcagataag
    57421 tgaatccgag ctgtcccgac aggtgctgat gcagcttgtc aaccaatccc tgattgtaca
    57481 ggcgggcaaa cgccgcaaca ttcaggcaag tgaagcggaa atcgatgccg tcgtcgcaca
    57541 aaatcccgcc ctcaaaaacc tcagccccac ccaacgccgc gagcttgccg acaacatcat
    57601 tgccgaaaaa gtccgccagc aggcagtgat gcaaaacagc cgcgtgagcg aagctgaaat
    57661 tgatgccttc ctcgagcagg cgcaaaaaca aggcatcacc ctgcccgaag gcgcaccgtt
    57721 gcgccaatac cgcgcccaac acatcctgat taaagccgac agcgaaaacg ccgccgtcgg
    57781 cgcggaaagt accatccgca aaatctacga ccaggcgcgc aacggcacgg atttcgcagg
    57841 tttggcacgc cgatattccc aagacgcaag cgcgggcaat ggcggcgact tgggctggtt
    57901 tgccgacggc gtaatggttc ccgcctttga agaagccgtc cacgcgctca aacccggaca
    57961 ggtcggcgcg cctgtccgca cccaattcgg ctggcacatc atcaaattga acgaagtgcg
    58021 cgatgccggc acgccggagg aacgtatccg caattccgtg cggcaataca tcttccaaca
    58081 aaaagccgga caggcaaccg tcaacctgtt gcgcgacctg cattccggcg cgtatgtcga
    58141 catccgctaa ggcggtttga atccaaaagt cataccgatc gggcaaaagt ccgggcggta
    58201 tggctttttt gaatttcgag ttacttttac accgccattc gtcattcccg cgcaggcggg
    58261 aatctagcaa cgaaaagtaa caggaattta tcgggaatgg ccggagttta aaggtctgga
    58321 ttcccgcctt cgcgggaatg acgattcaga agttacacga aactcaaaaa aaaacgaaac
    58381 cgaacgaacc ggattcccgc ttttacggga atgacggcat atcggtttcc gtgaggacaa
    58441 acctagattc ccgcctgcgc gggaatgacg ggattttaga ttgcgggtat ttatcgggaa
    58501 tggcgattta aaaattacct aaaactaaac ttaaaagcaa ctgaaactta aaaaactaaa
    58561 atttcgcctg cgtgggaagg atgggatttc agatttctgt ttttgtggga atttgccgta
    58621 tcgggcttca gacggcattg cctgccgttt tgcccccggg tgcggctgcc ttgatgtagt
    58681 tgagcgagac aaactgcttc tcggcatcca attcggtgat tttaaacaat gcctgcgatt
    58741 tgggcagcgc gtcaaacgga ataccggtcg cgcgcgttgt cagtggcaga ccttcgatgc
    58801 ggacgaggtc ttctttcaga atcgtcgcgg tcagttcgct gatgccttgt tgttgcaggt
    58861 acacgaggct ccagtaggct tccatctgcc gttggaagtc ggcgtaggcg gcgtaggcgg
    58921 tgtcgaaatc gcgcagggcg gcgaagagcg cggcatcgct tttttgatac agcggctcgg
    58981 cagtgtcgtc gatcaggctg atcagctgct tttggttgat gtagtcggcg gcgcggcgca
    59041 gcggcgaggt aaaccagccg taatgctgca cgcccatgcc gatgtgcggc tcggattggg
    59101 tgctcatgcg cactttgcct gccggttgga cgcggaaaag gccgggcagc ccgttttcgt
    59161 ctagcatttg cgcccaagtg ctgttggcaa gaatcatcat ctcgctgacc agcgtatcga
    59221 tgggcgaacc gcgttcgcgg cggacgacgg agacgttgcc ttcttcatcc aattcgatgc
    59281 tgtaatcgta ttgcggcgcg cggtcgggtt cgtatttgcc gcgcgctttt tgcagggcgg
    59341 tggcgaattg atagaaccaa atcaggtctt gatggtgggc gaacatcatt tcgcctgctt
    59401 ggtccaagcc ggtttctgcg ttgaaatgcg gctcgatggc ttggatacgc aggtttgcgg
    59461 cgatgttgac ggcttcgatt ttgcaggtcg gctcgccgac gttgaactcg ccgtccacat
    59521 cgaaataaat gctgacggca gggcggtatg cgcctgcatc gaggctgaac gcggtaatcc
    59581 agttttcggg cagcatcgtg attttgccgc cggggaaata aaccgtactc aaccgctgca
    59641 taatgatttg ttccattccg ccgccttgtc ggacggcaag cgacggcgcg gcgatgtgga
    59701 tgccgacgcg cttcgtgccg ttgcccaaat cggtcaggct caaggcatcg tccacttcgg
    59761 tggtcgattc gtcgtcaatg gaaaaggcgg taacgtcggc cttgggcagg tcgggcattt
    59821 cgggaaggga gaggtcgggg aaacctgttc ctttggggaa gtatttgatt tcaaagccgt
    59881 cttgcaggta ttgcggaatg gacgtaatgc cgcccgtttt tttcgccagt tcgtaggcgg
    59941 aggttttcag tgcgtcggcg gctttggtaa aggctttgta ggtcagcgac tgtttgtcgg
    60001 gcgcgtgtaa gatggttctc aaatccgccg cgatttcaga cggcatctcg ccgcgtttca
    60061 aggcttccgc ccaagcgtcg atttgcgcgt cttgctgttt tttgcgttcg atggcggcaa
    60121 gcgcttgttt caaagtttct tcgggcgcgg ctttgaacac gcctttggct tttttgtaga
    60181 aatacaccgg cgcggcgtac agcgcaatca aagtcgccgc cagctcggtt ttggtcggcg
    60241 catggccgta atattcttcg gcgatggctt cggcggtaaa ctcctcttcg ccgcatactt
    60301 cccacaataa atcggtgtcg atgtccgccg cctgcgcctg agcgttttcc aaaaacgccg
    60361 ccatatcgcc gtcaaactcg gcaaagacat tgtttgcctt cactttggtg cgtttgccgt
    60421 gttgggtatc gacttggtag gtagcgtcgt ttttttggac gacgacggca actttgaact
    60481 ggccggactc ttcgtaaaaa atattcattt ttcggatttt tctgtggaaa ctcaagcggg
    60541 cgattttagc agattaccga aaatgccgtc tgaaaaaagg ttgggggaag gcgggtgcgg
    60601 ctttgcggtg cttgcgttgc gtttttgacg gggtacaatc gccgtttttg aacggaggac
    60661 ggaatggaga atgtaaaccg cgtgccggag caggcacgtt atgatgccga acgcaggcag
    60721 gcagacgaag cattggcgga cgtgtttccg gcagtcagta ttttcggcag cgcgcgcacg
    60781 ccgcagaatc atacggatta tgcgtttgcc tgccgtctgg cgcggcggct gtcggattcg
    60841 ggtattgccg tcatttcggg cggcgggccg gggattatgg aggcggcaaa caagggcgcg
    60901 tttgccggga agtcggtttc ggtagggctg aacattgccc tgccgcacga gcagaaaccg
    60961 aatccgtatc aggacatcgc cttgcggttt tcccgttttg ccgaacgcaa ggcagtgttt
    61021 ttccgctatt cccaagcata tgtcgtgatg ccgggcggct tcgggacgct ggacgaattg
    61081 tttgaaatcc tgaccttggt gcagacgggc aaagtgccgc cgcgtccggt cgttttggtt
    61141 ggaaaggcgt tttggtcggg cttggcggag tggataaacg cgcagctttt ggcgcgcggt
    61201 atgatttccg aaggggccgc ttctttgttc tccatatcgg acgacgaaga cgaaatcatt
    61261 gcgtatctgt cggaacacgg gcttcagacg gcatagcgtc ctgagagtga tgtataattg
    61321 caaacaattt gtcaattttt gatgtctttt ccgaacagga tgccgatatg atcaacccca
    61381 tcgcctcgct ttccccccta gacggccgtt atgcccaatc cgttgaagca ttgcgcccga
    61441 ttttttcaga gtacggactg atgaaggcgc gcgtcaaagt cgaattaaac tggctcaaag
    61501 ccctggccgc cgcgccggag attgccgaag tgccgccctt cagtgccgaa acgcttgccg
    61561 aaatcgacaa agtcatcgaa aacttttcat tagaagacgc ggccgccgtc aaagccatcg
    61621 aagccacgac caatcatgat gtcaaagcca tcgaatattg gctgaaaaaa cgttttgccg
    61681 aagtgccgga agtcgccgcc gtgagcgagt tcatccactt cgcctgcacc agcgaagaca
    61741 tcaacaacct gtcccacgcc ctgatgctgc aagaggcgcg cgaaaccgtc atcctgccca
    61801 aactggcaga aatcatcgga aagctcaccg atatggcgca cgagcttgcc gccgtcccga
    61861 tgatgagccg cacccacggc cagcccgcca cgccgaccac tttgggcaaa gaaaccgcca
    61921 atgtcgtgta ccgcctgcaa cgccagttca aaatccttca ggcgcaagaa tttctcggca
    61981 aaatcaacgg cgcggtcggc aactacaacg cccacatggc cgcctatccc gatgtggatt
    62041 gggaaacaca ctgccgcaac ttcgtcgaaa tcagcctcgg cctgaccttc aacccctaca
    62101 ccatccaaat cgagccgcac gactatatgg cggagttttt ccaaaccctc agccgcatca
    62161 acacgattct catcgacttc agccgcgacg tttggggtta tatttcattg ggttatttca
    62221 aacaaaaagt caaagcgggc gaagtcggct cttccaccat gccgcacaaa gtcaacccca
    62281 tcgactttga aaactccgag ggcaacctcg gcatggcaaa cgccgtattg ggctttttgg
    62341 cggaaaaact gcccgtctca cgctggcagc gcgatttgac cgacagcacc gtattgcgca
    62401 atatgggcgt gggcgtgggc tatgccgtgt tgggtttcgc cgcccacctg cgcggtctga
    62461 acaagctcga acccaaccct gccgcgcttg ccgccgattt ggatgtcact tgggagctgc
    62521 tcgccgagcc gattcaaacc gtaatgcgcc gttacggtgt cgccaatcct tacgagaagc
    62581 tgaaagacct gacgcacggt aaagacggca ttacgcccga agtgttgaaa ctctttatcg
    62641 aatcgttgga aattccggca gaagccaaag ccaaattgct tgagctgacc cccgcgctgt
    62701 atgtgggcaa ggctgaagcg ttggcgaaac ggatttgagt gcttattgaa accgatgccg
    62761 tccgaacgcg cgttcagacg gcatttttaa gataacggga catacggggc gatatttatg
    62821 caagctgtcc gatacaggcc tgaaattgac ggattgcggg ccgtcgccgt gctatccgtc
    62881 attattttcc acctgaataa ccgctggctg cccggaggat tcctgggggt ggacattttc
    62941 tttgtcatct cgggattcct cattaccggc atcattcttt ctgaaataca gaacggttct
    63001 ttttctttcc gggattttta tacccgcagg attaagcgga tttatcctgc ctttattgcg
    63061 gccgtgtcgc tggcttcggt gattgcctct caaatcttcc tttacgaaga tttcaactaa
    63121 atgaggaaaa ccatagagct ttctacggtt tttttgtcca atatttattt ggggttccga
    63181 ttggggtatt tcgatttgag tgccgacgag aaccccgtac tgcatatctg gtctttggca
    63241 gtagaggaac agtattacct cctgtatccc cttttgctga tattctgctg caaaaagaca
    63301 aaatcgctac gggcgttgcg ccacatcagc atcatcctgt tcctgatttt gactgccaca
    63361 tcgtttttgc cggccgcgtt ttataccgac atcctcaacc aacccaatac ttattacctt
    63421 tcgacactga ggtttcccga gctgttggtg ggttcgctgt tggcggttta cgggcaaacg
    63481 caaaacggca gacggcaaac agcaaatgga aaatggcagt tgctttcatc actctgcttc
    63541 ggcgcattgc ttgcctgcct gttcgtgatt gacaaacaca atccgtttat cccgggaatg
    63601 accctgctcc ttccctgcct gctaacggcg ctgcttatcc ggagtatgca atacgggacg
    63661 cttccgaccc gcatcctgtc ggcaagcccc atcgtatttg tcggcaaaat ctcttattcc
    63721 ctatacctgt accattggat ttttattgcc ttcgcccatt acattacagg cgacaaacag
    63781 ctcggactgc ctgccgtatc ggcgattgcc gcgttgacgg ccggattttc cctgttgagc
    63841 tattatttga ttgaacagcc gcttagaaaa cggaagatga ccttcaaaaa ggcatttttc
    63901 tgcctctatc tcgccccgtc cctgatactt gtcggttaca acctgtattc aagggggata
    63961 ttgaaacagg aacacctccg cccgctgccc ggcacgcccg ttgctgcgga aaataatttt
    64021 ccggaaaccg tcttgaccct cggcgactcg cacgccggac acctgcgggg ttttctggat
    64081 tatgtcggcg gcagggaagg gtggaaagct aaaatcctgt ccctcgattc ggagtgtttg
    64141 gtttgggtgg atgagaagct ggcagacaac ccgttgtgcc gaaaataccg ggatgaagtt
    64201 gaaaaagccg aagccgtttt cattgcccaa ttctatgatt tgaggatggg cggccagccc
    64261 gtgccgagat ttgaagcgca atccttcctg atacccgggt tcaaagcccg attcagggaa
    64321 accgtcaaga ggatagccgc cgtcaaaccc gtctatgttt ttgcaaacaa tacatcaatc
    64381 agccgttctc ccttgaggga ggaaaaattg aaaagatttg ctataaacca atacctccgg
    64441 cctattcggg ctatgggcga catcggcaag agcaatcagg cggtctttga tttggttaaa
    64501 gatattccca atgtgcattg ggtggacgca caaaaatacc tgcctgaaaa cacggtcgaa
    64561 atacacggcc gctatcttta cggcgaccaa gaccacctga cctatttcgg ttcttattat
    64621 atggggcggg aattccacaa acacgaacgc ctgcttaaat cttcccgagg cggcgcattg
    64681 cagtagcctg ccttcttgcc ggatattgcc tttggcagcc tatgccgctg tttgcccttt
    64741 gaggcggctt ttattttgcc gttttgaggc cggggtcggg aataaccgtt ttttgatgat
    64801 tttccctccc cggctgtgtc atcaaattcc tagttgcctt tccaaactct ccaccagatt
    64861 gtcatccagt ttcaaagcct gcgacaggcg ggcgaggaag acggtttctt tccgcgacaa
    64921 atcggcacag accaaccttg ccgccagata ggtctccgcc gccaacgcct catcgttgcc
    64981 gacggcggcg gcgatgtccc cgatgcttgc gggcaggcgg tattcggcgg cgagccatgc
    65041 ggcagtttcg gggtctgtgc cgctttcctg ttcgatagtc cggcgttcgg cttcgtctat
    65101 catgccgtct gaagcggcgg cggctatcat ggtacgcaat acggtgcggc tgtatgtttc
    65161 ttcggttttt ccggcaggtt ggaaatcgct ttgtgttacg gttgcccgcc ctttgttttg
    65221 ctgccacatc tgatagcccc ggtaggcgag gtagcccaaa gcggcggtcg aaccgatttt
    65281 ggtgatggtt ttgcggtttt taccgttcag cagcatggag gcgacaccgg caaccagcgc
    65341 gcctccgccg aatgaattga gcgggctgcc ggagaatgtg ttgccttttt tttgaaccgt
    65401 gcttaagact tggttgagca accgggtgaa gttcatgatt tttcctttct gttgcgggaa
    65461 gggcggtatg tttaccctat ccttttaaac ggtggcaggc cggccaataa ttgttggccg
    65521 taccgctgcg ttttgatgcg gttgtcgagg atggttacgc ggccgtagtc ttgttcggtg
    65581 cggatgaggc ggccgacggc ctggatgagt ttgatgccgg cttcggggac ggtgatttcg
    65641 atgaaggggt tgccgccgcg ttgttctatc caacggtttt gggttttttc gatggggttg
    65701 tcgggcatgg cgaaggggag tttggcgatg atgacttgca cgcaggcggt gccgggcagg
    65761 tcgagccctt cggcgaagct gtcgagtccg aagatgatgc tggctttgcc ttcttctatg
    65821 gcttggtggt gtttttgcag gaggacggct ttgggtaatt cgccttgtac gagcaagagc
    65881 ggcaggtagt ctccgggcag gtgcagggcg acatcctgca tttgtttgcg cgaggaaaac
    65941 aggacgagtg tgccgatggc ttcggtgggc gaaatcagct tgggcagcca ttcgatgacg
    66001 gcggcggtgt gggcttcggg gtctttgggg ctggcgtata tggaggggat gtagagttcg
    66061 ccctgttttt caaagtcaaa ggggcttttg agggcgaggg tggtggtttc gggcagccac
    66121 agcaggccgg tttggcgcaa aatcaagttg aagctgccga gcgattgcag ggtggccgaa
    66181 gtcagcaccg cgcctgccgc gcgccgccac aggctgttgg caaggtggga cgcgctgctg
    66241 atggggctgg cattgaaaat atagtcgttt ttgtcgtcgg cacggcgggc tatccatttc
    66301 gccaacggct cctcgccctc aatggaaaca gtggagagca aatcccaaac cgcgctgatt
    66361 tgttcgatac gggcgataaa aaggccgaac tcgccggtca ggcggtcgat gagcgcaccg
    66421 tcctgttctt tttcgcggcg tgcggcggaa agcgcatcgt tcagcccgac aacgtgtttg
    66481 agcaggctgc gtgcagcaat ggccgtattg gaaacggtgg tttcgaggcc ttcggggatt
    66541 ttgccgtctt cccacagcca agtcggttcg ctgttggttc gtctgtcgtt ttcagacagc
    66601 cccatactta aagacggctc ttccgccaaa tggaattgcc attcgtgcag gctgtcgagc
    66661 aaggatgcgg cggcttcgtc ggcaaggttg gcaagttcgg ctttatcggt aagcgcggca
    66721 attttgccgg taagctgcgg cagtttttcc agcgtccaaa cggcaatatt ccatgaatgt
    66781 tcggcggcaa aacggctgag ggcttttttg ggcaggtggt gcgcttcgtc tatgcaatag
    66841 aaactgtttt cgggcgcagg cagaatcacg ccgccgccca tgctgatgtc ggcaagcaga
    66901 agatcgtggt tggcaacaac gacatcgacg gtttccaaca tatcgcgtgc caggtaaaaa
    66961 gggcattccg gacggttggg acaggcggct ttcaggcagc cgtggcggtc gttggtcact
    67021 ttgagccaaa tcgcgtcatc gattttttcc ggccaagcgt cgcggtcgcc gttgaaccgt
    67081 cgggcggaaa attcgtcggc gatgtcgcgc agcagcttca attcttccgg cttgggtttg
    67141 ctgtcccaca agacggcggg ggcttcaaag ccgagcaggt tttgctgggc gttgctttgc
    67201 gtcagttgat agagtttgta ggggcagaga tagcggccgc gccctttggc aagtgcgaag
    67261 gtcagttcca aaccgctttt ttcgaccaga aacggcaggt cgcggtctac caactgctcc
    67321 tgcaaggcaa ccgtcgcgct gctcacaatc agccgcttgc cgcgtgtttg cgccatgatg
    67381 ccgcccgcaa gcaggtaggc aagcgatttg cccacgccgg tcggcccttc gattacggca
    67441 atgctttcgc cctcgcgctt gggcggctcg ccgccttctt cgcgcgtcaa cgtccgcgaa
    67501 aaagcgttgg caaccgccgc aatcatttcc cgctgcgaag cacgcggacg gaaatcgggc
    67561 aggtttttgc cgatattttg gtaatggtcg cggatggcgt ttttttctaa atcggtgagc
    67621 atagtatcgg tgggcggatg atttggggtc attttaacat tgcgcggatg cggtacggta
    67681 tcgttgtcgg acggtggttc gggcatatct gattattgaa agtaaaaaaa cggaagatat
    67741 tgggtcatcc gtacaaaatg gcgtctgaag cgggaaacgg gcttcagacg gcattgccgc
    67801 gcttatacgc cggcgacggg gcgggcggga tagccgtggg tatcgaccga acaggcaaac
    67861 cgccaaggcg tgtggacggt gtcggcggac aggtgggcga gttcgggaat gtgccgtttg
    67921 ataaaagtac cgtccgggtc ggtacggtat gaggcggcgg caatgtcggg gcaggtgtgc
    67981 cgtgaggcgg caagccgcca gttgccttgg ttgattgccg catcgaaatc ggtcagctgc
    68041 cgggcaaacc atatctcgcc ttcgcggcgg gggaggttta aaacgtggca gaaaaaatcc
    68101 gcgctcaagc gtctcagggc ggggtggagg ctgccggttt tgtgcaaaca gcgcatcgcg
    68161 gcatcgataa tcggaatgcc ggtccggccc tgctgccaaa gcgtcaggcg cagggtgtgt
    68221 tccggattgc cgtctgaagg gtcgtcatcc gcgtgctgca aggcaagttg aaggaaaaaa
    68281 tcgcggcgga tgatgttgtc cgcccacgcg ttcagacggc gttcgaggct ttcccgcgcg
    68341 agcaggcgcg gcgagatgca gccgacactc aaatacgcgc ccatcagcga agtgtttttg
    68401 cgcgaaggga aatcctttaa aacggagtag gaagccgcct gttcgagaaa ccgccgccac
    68461 tgccgccaag ccgccgtttc gccgccgttt tgcggcagga agatgccgtc tgaaagcgcg
    68521 gcaggcggcg gggcgggcag gttttcgggg aagggttggc ggtatgccgc gaataggtcc
    68581 gaaccggcgg ggggctgctt ggaaaagcgg tcgagccata cttcgcggta gcggttgaaa
    68641 tcggtgtgtg ccgtaccgtt gtctggtgtc aggtcggttt tgccgaaaac ggaacggtcg
    68701 ttgacgaagg ttaacgcgat gccgtgtttg tccaattcgt gccaaagggc gttgtcggcg
    68761 agtttgtcgg caaaagtatg ggattcgtcg gcgatgacgg cgcggatatt gaggcggacg
    68821 gcgagccgga caagcccggc aggcgatgcc gccgtgtaga gcgggatgcc gcgccttgcc
    68881 agcccttggg cgagttcggc ggcggattgg cggtagaacg cggcgcggcg cgggttgtct
    68941 gtttcggcat cgtcaatgca aatgccgata acgggcgaac cttcggcaac ggcggcgcat
    69001 aaggcggcgt tgtcgcggat gcggaggttt tggcggaacc agacgagcgt gtgcgcggcg
    69061 cgcgtgtccg cataaagggg gagggcggtt tcagacggca tttcggcagc ctttcctgct
    69121 ggcgattttt tcgttcagaa aatcgatgaa actgcggact ttcgcactca aaaatgccct
    69181 gtccgcataa acggcgttca gccggtcggt cgggacggcg tatccgggca gcagcctcac
    69241 cagcgggccg cagcgcaaat cgtgttccgc cgcccaaagc ggctgataac cgatgcacgc
    69301 gcccgcctta atcatttcgc gcatcatcag cgtgttgtcg gtacggatga cgggggtcag
    69361 ttcaagccgg tatttcttgc cgtccgattt gcgggtgagg tcgagtttct gctggttggt
    69421 gtaggtcggc aggacggcag gcagccccgc cacttcttcc ggtgtttccg gcacgccgtt
    69481 gcgcctcagg aagtcgggcg aggcaagcag ggcaaattcg atttccgcca gcgggcgcgc
    69541 aatcagcgaa ggggaaaggg tttgggaaac gcgcaacgcc aaatccacgc cttcggcaat
    69601 caaatcgacg tggcggttgt ccaaaatcag ttccaacgcc acttcgggat aacgttcgcg
    69661 gtattccgcc agccagttgc atatctggct gccggcaaac cacagcggca tcgttacgcg
    69721 cagcagcccc tgcggttttt ccgtcccccc ggcggctttt tgcgcggcat cgtcgagcgt
    69781 gtcgagcgcg taactgcatt gccggtagta ttcttccccg gcttcggtca ggctgaggtt
    69841 gcggctgttg tggtgcagga gtttggcttg gacggtgttt tccaagtggc tgacgtgttt
    69901 gcttgccatt gcggtggaga tgccgagcgc gtcggcggcg cgggtgaagc cgccgctttg
    69961 gacgacttgg cggaaaactt tgaggctgaa cagggtgtcc atattttctt gtgtggaaaa
    70021 gttgtatcaa taaaagcagt atatatttga aaaagggaaa catctatact ctgccgcctg
    70081 aaatgaagac aaatatcaaa ggagctttta tgtccgattg ctgcaaccgt atccaaccgg
    70141 ttttgctttc tgttttgcgt atcgtaaccg cctacctgtt tttgttgcac ggtacgtcga
    70201 aaatcttcgc cttccccatt gaaatgggca gcggttcgcc cggcgggctg ttgctgcttg
    70261 ccggtatttt agaaattgtc ggcggcattt tgctggtgtt gggcctgttt gcgcgccctg
    70321 ccgcgtttgt tttgtccggc cagatggcgg ttgcctattt tatggcgcac gcttccggaa
    70381 atgctttgtt cccgattgcc aacggcggcg agtccgcagt gctgttctgc ttcgtatttc
    70441 tctatatcgc ggcagcgggc ggcggagcat ggtcgctgga caggctgttt ttcaagcgta
    70501 aagcctgaac cggactgcct aaagtgtatt ttgttgaatg tttttgagga aaagaaatga
    70561 gccgtcaatc cctgcaacag gctgccgaaa gccgccgttc cgtttattcg ttaaataaaa
    70621 acctgcccgt tggcaaagat gaaatcgtcc aaatcgtcga acacgccgtt ttgcacacac
    70681 ctttttcgtt caattcccaa tctgcccgcg tggtcgtgct gtttggcgaa gagc
//
LOCUS       DAWXHA010000002        41501 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.002, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000002 DAWXHA010000000
VERSION     DAWXHA010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 41501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41501
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.002"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(392..784)
                     /gene="rpsI"
                     /locus_tag="AABD07_000067"
     CDS             complement(392..784)
                     /gene="rpsI"
                     /locus_tag="AABD07_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HFB2354698.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLTKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESLDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(797..1228)
                     /gene="rplM"
                     /locus_tag="AABD07_000068"
     CDS             complement(797..1228)
                     /gene="rplM"
                     /locus_tag="AABD07_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HFB2354699.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVATEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQDQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1406..1585)
                     /gene="ssrS"
                     /locus_tag="AABD07_000069"
     ncRNA           complement(1406..1585)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="AABD07_000069"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1591..1896)
                     /locus_tag="AABD07_000070"
     CDS             complement(1591..1896)
                     /locus_tag="AABD07_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HFB2354700.1"
                     /translation="MNIEQVYIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKITDMDNACQKALSRLGQE"
     gene            complement(1907..2236)
                     /locus_tag="AABD07_000071"
     CDS             complement(1907..2236)
                     /locus_tag="AABD07_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354701.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELERAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENARYRALLEQSREKISALAARLP
                     QRQETQQ"
     gene            complement(2290..3279)
                     /locus_tag="AABD07_000072"
     CDS             complement(2290..3279)
                     /locus_tag="AABD07_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HFB2354702.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLAEALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGSVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3402..6155)
                     /gene="ppc"
                     /locus_tag="AABD07_000073"
     CDS             complement(3402..6155)
                     /gene="ppc"
                     /locus_tag="AABD07_000073"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HFB2354703.1"
                     /translation="MRHLRYIYSIYGNERKIMQLHILNNPKDAALAADAEFLKQSLFN
                     LLHEEASPLVVETVKLLSTSDDSAALIEKVLPQLDERQTYDLTLACGLFAQILNIAED
                     VHHERRRQIHEDAGHNAAEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTE
                     VQRQTVLNFNRRIRALLPQRERCTNADALARLRREIDTVLLGLWQTSETRRHKLSVND
                     EINNGVSIFPMSFFEALPKLYRKMEHDFQTAYPDVRVPNILKIGGWIGGDRDGNPFVS
                     GETLRFAFRRHADAVFRFYRSELDKLYRELPLSIRRVKVNDDVMALAALSPDEEIART
                     EEPYRRAIAYIMARAMGKARSLGLGMGCKFGFLEPYASAQKFLDDLKKLQRSLIDNGS
                     RLLAEGRLADLIRSVSVFGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQK
                     QAALLRELSHQRPLYSPFITYSDHTRRELAIFNEARKIKDEFGEDALTQSIISNCEQP
                     GDLLALALLLKESGLLAVENGKPHSRINIVPLFETIEALENACPVMETMFRLDWYDAL
                     LESRGNIQEIMLGYSDSNKDGGYVTSSWCLHQAELGLVELFKKYDVRMRLFHGRGGSV
                     GRGGGPSYQAILAQPAGSVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASI
                     LPDKKDPDAKLMQALSDVSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRK
                     TLARIQDLRAIPWVFSWMQNRLMLPAWYGFGSAVETLCEGSPETLAALRGHAQNNPFF
                     QAMLSNMEQVMAKTDITLAENYAGLSESPEKAKVIFGMIKEEYRRSRKALLDLLQTEE
                     LLRDNRSLARSLALRIPYLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLR
                     NTG"
     gene            6147..7040
                     /locus_tag="AABD07_000074"
     CDS             6147..7040
                     /locus_tag="AABD07_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HFB2354704.1"
                     /translation="MPHPCQTVHTLTTHVPKCRLKLNAARRRRYNRPQLFFPNIIMTA
                     TEHDNDDALLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGVGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAETLAGRLKRINHTVDVRAVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRACVQTKTPLVSGAAVRFEGQLAAYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVLSPLVGIVGCTQAAEALKILLEAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPVCGAAR"
     gene            complement(7440..7664)
                     /locus_tag="AABD07_000075"
     CDS             complement(7440..7664)
                     /locus_tag="AABD07_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HFB2354705.1"
                     /translation="MDAVQELERRIVELEIQTALQEDVISGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(7665..9053)
                     /locus_tag="AABD07_000076"
     CDS             complement(7665..9053)
                     /locus_tag="AABD07_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HFB2354706.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNVIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLVAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCTGL
                     GFSPLATAAIVGTAGALGDAGSPASDSTLGPTMGLNADGRHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(9139..9960)
                     /gene="prmC"
                     /locus_tag="AABD07_000077"
     CDS             complement(9139..9960)
                     /gene="prmC"
                     /locus_tag="AABD07_000077"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFB2354707.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEI
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSERQWDIIVSNPPYIENGDKHLSQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTLGKYMKHLK"
     gene            complement(10376..11230)
                     /locus_tag="AABD07_000078"
     CDS             complement(10376..11230)
                     /locus_tag="AABD07_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2354708.1"
                     /translation="MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAI
                     KEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANR
                     VEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVALGVVSPKNKPITDMAQLKDQTL
                     LVNKGTTADAFFTKSHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAKENPN
                     FEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKV
                     KPEALLAE"
     gene            complement(11343..12074)
                     /locus_tag="AABD07_000079"
     CDS             complement(11343..12074)
                     /locus_tag="AABD07_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFB2354709.1"
                     /translation="MALLSIRKLHKQYGSVTAIQSLDLDLEKGEVIVLLGPSGCGKST
                     LLRCVNGLEPHQGGSIVMDGVGEFGKDVSWQTARQKVGMVFQSYELFAHMTVIENILL
                     GPVKVQNRDRAEAEAQAGKLLERVGLLDRKNAYPRELSGGQKQRIAIVRALCLNPEVI
                     LLDEITAALDPEMVREVLEVVLELAREGMSMLIVTHEMGFARKVADRIVFMDKGGIVE
                     SSDPETFFSAPKSERARQFLAGMDY"
     gene            complement(12076..12744)
                     /locus_tag="AABD07_000080"
     CDS             complement(12076..12744)
                     /locus_tag="AABD07_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFB2354710.1"
                     /translation="MAFEWLFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVL
                     RSRNRLVRFVGRFYLETIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFSLWGVA
                     EMGDLVRGALESIEKHQVESGLAPGLSRGQVFRCIELPQSIRRVLPGAVNLFTRMIKT
                     SSLAWLIGVIEVVKVGQQIIENSLLTQPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQ
                     KWEH"
     gene            complement(12734..13393)
                     /locus_tag="AABD07_000081"
     CDS             complement(12734..13393)
                     /locus_tag="AABD07_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFB2354711.1"
                     /translation="MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAY
                     RIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMA
                     EAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSV
                     VSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENRVRSAKYG
                     V"
     gene            complement(13537..14979)
                     /gene="tldD"
                     /locus_tag="AABD07_000082"
     CDS             complement(13537..14979)
                     /gene="tldD"
                     /locus_tag="AABD07_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HFB2354712.1"
                     /translation="MHPTYSAVQARLLEANRLSPELFAKSLCIIGAHHVDYADIYCQR
                     TAYESWHLEEGIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAIG
                     AAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAG
                     LTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGGAGGGGRYDLAYFDET
                     LVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTS
                     VFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDET
                     NARLTGTQSTGNGRRQSYASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQ
                     VDITSGKFVFGASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGV
                     CGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     regulatory      15096..15200
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            15266..16492
                     /gene="cytX"
                     /locus_tag="AABD07_000083"
     CDS             15266..16492
                     /gene="cytX"
                     /locus_tag="AABD07_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HFB2354713.1"
                     /translation="MSGNASSPSSSAAIGLVWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKCGSVLFSVANMLQLAGWTAVM
                     IYVGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARRTGGLKTVSMLLMLLAV
                     LWLSVEVFASSGTNAAPAVSDGMTFGTAVELSAVMPLSWLPLAADYTRQARRPFAATL
                     TATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGITGILAVVLSTVTTTFLDT
                     YSAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLI
                     ADFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVS
                     VRLFFKKTQSLQRNPS"
     gene            16489..17589
                     /locus_tag="AABD07_000084"
     CDS             16489..17589
                     /locus_tag="AABD07_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HFB2354714.1"
                     /translation="MTRIAVLGGGLSGRLTALQLAEQGYQIELFDKGTRQGEHAAAYV
                     AAAMLAPAAEAVEATPEVIRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADEIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPQDLQAQYDWVIDCRGYGAKTAWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIAAGLRPTLNHHNPEIRYSRERRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIGRQD"
     gene            17611..18228
                     /gene="thiE"
                     /locus_tag="AABD07_000085"
     CDS             17611..18228
                     /gene="thiE"
                     /locus_tag="AABD07_000085"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HFB2354715.1"
                     /translation="MTFPPLKSLLKFYAVVPTADWVGRMVKAGADTVQLRCKTLHGNE
                     LKREIARCVAACQGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPGYIASGAIFQTTTKQMPTAPQGLDKLREYVEQARGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
     gene            complement(18472..18651)
                     /locus_tag="AABD07_000086"
                     /pseudo
     CDS             complement(18472..18651)
                     /locus_tag="AABD07_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557963.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            18650..18844
                     /gene="thiS"
                     /locus_tag="AABD07_000087"
     CDS             18650..18844
                     /gene="thiS"
                     /locus_tag="AABD07_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HFB2354716.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQKPFAVAVNTVFIPKGAY
                     AETVLHENDKIDIVRPVVGG"
     gene            18923..19711
                     /locus_tag="AABD07_000088"
     CDS             18923..19711
                     /locus_tag="AABD07_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HFB2354717.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     TGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALKILRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARTKAQASTPTVGQPFWHSAEY"
     gene            19690..19938
                     /locus_tag="AABD07_000089"
     CDS             19690..19938
                     /locus_tag="AABD07_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol phosphate phosphatase"
                     /protein_id="HFB2354718.1"
                     /translation="MAFGGILKKAAKMPSEGFRRHRGPKRANRHSPASRLCREEQGNR
                     PENLAARPDTATNETPGLPGAQAAAQALSTAIEGSFVV"
     gene            complement(20445..21269)
                     /locus_tag="AABD07_000090"
     CDS             complement(20445..21269)
                     /locus_tag="AABD07_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HFB2354719.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKAAGGVPENRAVENTPPA
                     TPAAGNAAASVEDTAALLKPGDILSEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLADAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(21382..23160)
                     /locus_tag="AABD07_000091"
     CDS             complement(21382..23160)
                     /locus_tag="AABD07_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HFB2354720.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLAREADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRDLGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWAFDRPQYELGSLSPVAA
                     LACRRALGCLGLETQIKWPNDLVVGRDKLGGILIETVRAGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLAELGAVLEQYAEEGFAPFLNEYETANRD
                     HGKAVLLLRDGETVCEGTVKGVDGRGVLHLETAEGEQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGESKKAQVKEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRPAGKRYPFPTTT
                     GNAVASGMMDAVCGSIMMMHGRLKEKNGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHA"
     gene            complement(23157..23663)
                     /gene="rfaE2"
                     /locus_tag="AABD07_000092"
     CDS             complement(23157..23663)
                     /gene="rfaE2"
                     /locus_tag="AABD07_000092"
                     /inference="COORDINATES: protein motif:HMM:NF013621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HFB2354721.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKGGDRPVNSLENRAAVAAALESVDLVTWF
                     DEDTPAALIEAVKPEVLVKGGDWVVDKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            complement(23875..23950)
                     /locus_tag="AABD07_000093"
     tRNA            complement(23875..23950)
                     /locus_tag="AABD07_000093"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23915..23917),aa:His,seq:gtg)
     gene            complement(23978..24054)
                     /locus_tag="AABD07_000094"
     tRNA            complement(23978..24054)
                     /locus_tag="AABD07_000094"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24018..24020),aa:Arg,seq:tct)
     gene            complement(24079..24156)
                     /locus_tag="AABD07_000095"
     tRNA            complement(24079..24156)
                     /locus_tag="AABD07_000095"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24119..24121),aa:Pro,seq:tgg)
     gene            24379..25233
                     /gene="folD"
                     /locus_tag="AABD07_000096"
     CDS             24379..25233
                     /gene="folD"
                     /locus_tag="AABD07_000096"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HFB2354722.1"
                     /translation="MSAQLINGKEVSQKHLQAIAEAVAQRQQDNLHTPCLAVVLVGGD
                     PAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAILERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKG
                     GWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            complement(25295..25876)
                     /locus_tag="AABD07_000097"
     CDS             complement(25295..25876)
                     /locus_tag="AABD07_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFB2354723.1"
                     /translation="MEEKNDYTDAVSDNRNGQEIEVGIAGAGDRILAALLNQLFTFLI
                     LLVPFVGLIAFAVKNEGRIGGREEIFGLLLGMTSFWVGLAGILAYTVIQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGENGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            26051..27166
                     /gene="asd"
                     /locus_tag="AABD07_000098"
     CDS             26051..27166
                     /gene="asd"
                     /locus_tag="AABD07_000098"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HFB2354724.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTSSNVGGAA
                     PDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIALDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAIHAQVADELADPSSAILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSGNPTVIDGLCVRIGAMRCHS
                     QAITLKLKKDLPVSEIEAILAGANDWVKVVPNEKEASIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPMRRVLRIVLGSL"
     gene            complement(27259..27789)
                     /locus_tag="AABD07_000099"
     CDS             complement(27259..27789)
                     /locus_tag="AABD07_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HFB2354725.1"
                     /translation="MESFELEDLTLWLIRDADEAEMWIDRWAVSYPVVQMSEASANGS
                     TEAWQSALQTAFERIQGRHIAVVAHGAGAAAFLAWLYRADILTQKKLAGIILVSPRPD
                     IFPDDAEHTFQRVRCPCRAALVVSEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(27799..28143)
                     /locus_tag="AABD07_000100"
     CDS             complement(27799..28143)
                     /locus_tag="AABD07_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354726.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAVFMLSRM
                     QGWLAPTKANPIWALVWLLICLPCLLIAAKCLGWKGWRRVVNIFVCLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            complement(28130..28909)
                     /gene="xth"
                     /locus_tag="AABD07_000101"
     CDS             complement(28130..28909)
                     /gene="xth"
                     /locus_tag="AABD07_000101"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFB2354727.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LGVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            complement(29080..30501)
                     /locus_tag="AABD07_000102"
     CDS             complement(29080..30501)
                     /locus_tag="AABD07_000102"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HFB2354728.1"
                     /translation="MTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHL
                     AGCLKALGGIIGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDSAGGTTWRRG"
     gene            complement(30517..31569)
                     /locus_tag="AABD07_000103"
     CDS             complement(30517..31569)
                     /locus_tag="AABD07_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HaeII family restriction endonuclease"
                     /protein_id="HFB2354729.1"
                     /translation="MTLEEQQAKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQLDF
                     LNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSD
                     GGVESYIYKQFFNRFSQMSEALAYVGNTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEI
                     VVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITMPKNEHLKLPAKIHRVG
                     VTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSL
                     LTQIGWKSRIQNIVTEDDLISWYEKALRGQYPIAEALLENIKTEIMREFPAVNEANEF
                     LDFAQNRGYDITVTHF"
     gene            complement(31566..32513)
                     /locus_tag="AABD07_000104"
     CDS             complement(31566..32513)
                     /locus_tag="AABD07_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2354730.1"
                     /translation="MYKTIDLFSGIGGIRLGFEKYGCTNVFSSEWDKYARQVYEANFG
                     EKPFGDINGIDPSDIPDHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEILKTKQ
                     PKAFLLENVKRLTTHDSGRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG
                     FSDNIPFYFPEPINQYRPLGELLENDRDVEPSYFLSDTLKQKRLAALKKAPPTPSIWH
                     ENIGGNVSALPYSCALRAGGSYNYLVVNGVRRLTGREMLRLQGFPDDFEINIPYSQVR
                     KVAGNSVSVPVIEAIAENMLASLSGKVEQKGQLDLLEAG"
     gene            complement(32567..33721)
                     /gene="obgE"
                     /locus_tag="AABD07_000105"
     CDS             complement(32567..33721)
                     /gene="obgE"
                     /locus_tag="AABD07_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HFB2354731.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEARARTAAFLEAVGWDYPEPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLAEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            34000..34530
                     /locus_tag="AABD07_000106"
     CDS             34000..34530
                     /locus_tag="AABD07_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HFB2354732.1"
                     /translation="MNTNQPAVYDPLTRALHWLTVAGFIGILTTIVLWTIYEEAEWAG
                     SLFGLHKSFGFLMLTVIALRIVWAVANRAKRPQSDSKAAAAGHGILYLLMLAVPVIGM
                     IRQYGGGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLFAAVVGHVAMVVVH
                     RVQGKDVLYRMTGRVR"
     gene            complement(34565..35440)
                     /gene="rsmI"
                     /locus_tag="AABD07_000107"
     CDS             complement(34565..35440)
                     /gene="rsmI"
                     /locus_tag="AABD07_000107"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HFB2354733.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGGLVSVREHNERQMADKVIGFLSDGLVVAQVSDAGTPAV
                     CDPGAKLARRVREAGFKVVPVVGASAVMAALSVAGVAESDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPVVMFETPHRIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALAADGNQSRGEMVLVLYPAQDEKHEGLSESAQNAMKILAAELPTKQAAELAAKITGE
                     GKKALYDLALSWKNK"
     gene            35487..35834
                     /locus_tag="AABD07_000108"
     CDS             35487..35834
                     /locus_tag="AABD07_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HFB2354734.1"
                     /translation="MRLNHKQGTAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNQRFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GNRPPEWIKNITG"
     gene            35839..36432
                     /locus_tag="AABD07_000109"
     CDS             35839..36432
                     /locus_tag="AABD07_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HFB2354735.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAEKILVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAMLKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            36496..37104
                     /locus_tag="AABD07_000110"
     CDS             36496..37104
                     /locus_tag="AABD07_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HFB2354736.1"
                     /translation="MKPKPHTVRTLIAAVLSLALGGCFSAVVGGAAVGAKSVIDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIIT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            37112..37762
                     /locus_tag="AABD07_000111"
     CDS             37112..37762
                     /locus_tag="AABD07_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354737.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRAVLLICI
                     TAIGALAVGIVSTFNPNGDKTLQTEPQHTDSPRETEFWLPNGAVGQDAAQPEHHHAAS
                     SEPAQPDGTEESGSGLPPPAAPKKNRVKPRPSDAARAADSLTGTGTQAENTLKETPVL
                     PTNAPHPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPAKPHKEILDNLF"
     gene            37802..38581
                     /gene="map"
                     /locus_tag="AABD07_000112"
     CDS             37802..38581
                     /gene="map"
                     /locus_tag="AABD07_000112"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HFB2354738.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGITTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGGVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPATGKP"
     gene            38680..38979
                     /locus_tag="AABD07_000113"
     CDS             38680..38979
                     /locus_tag="AABD07_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2354739.1"
                     /translation="MKIFENIEDVKAIRKKTGMNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECLDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKAERKKQG"
     gene            39217..39588
                     /locus_tag="AABD07_000114"
     CDS             39217..39588
                     /locus_tag="AABD07_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFB2354740.1"
                     /translation="MKLLTTAILSSAIALSSMAAAGTDNPTVAKKTVSYVCQQGKKVK
                     VTYGFNKQGLTTYASAVINGKRVQMPINLDKSDNMDTFYGKEGGYVLSTGAMDSKSYR
                     KQPIMITAPDNQIVFKDCSPR"
     gene            complement(39775..41241)
                     /locus_tag="AABD07_000115"
     CDS             complement(39775..41241)
                     /locus_tag="AABD07_000115"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HFB2354741.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGADGVINPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCRYLQKRYDVFKTQKLFENMEFSTDRNKISDWAPLIMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDWQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGLPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSFMDLPL
                     SIHMDNLYPMLRAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         9302 a        11831 c        11062 g         9306 t
ORIGIN      
        1 attatgatta aggatgcttg gttatttaag atattctccc cattatataa tacaggttag
       61 ctaaaaacta ggaaactgtt cctttactga tcggcttgaa cggcggcggt gacacctatg
      121 ctaaccctaa tagattgcca tttttatagg ctagttgaaa tagccgttct attttttcaa
      181 taactctaaa taaattaaaa gttattttac aaagtagaaa tacgatgtcc tctccagtaa
      241 cagccatccc tgacggtcag ttcgtccgtg tagtcgatac tggtgctgtt tttgattttt
      301 gcccaatccg taatctttag attaccaatg ggaaaccgcc tgttacaaat aaaaaaccct
      361 gcgataagca gggttttttg aatttccaaa atcaacgttt ggagaattgt tttgcacggc
      421 gtgctttgcg cagacccggt tttttacgtt cgacttcgcg cgcatcgcgg gtaacgaaac
      481 cggcttgaga caaggcgggt ttcaaagcag cgtcaaaatc aatcagggca cgggtaatac
      541 cgtggcggat tgcgccggac tgaccggttt cgccgccgcc gacaacattt actttgatgt
      601 cgagagattc ggcgttttca gtcagaacca gaggttggcg gacaaccata cggctggttt
      661 cgcgtgcgaa gaattcgtca acgggacggc cgtttacgat gatttgaccc gtacctttag
      721 tcaggaatac acgagccact gaacttttgc ggcggcctgt gccgtagtag tatttaccgt
      781 tcatgtcgtg tccttattat ttcagttcca aaactttggg ttgttgcgca gcatgggcat
      841 gctccgcacc agcgtacact ttcagttttt taatcatggc gtaacccagc ggacctttgg
      901 gcagcatacc ttttacagcc tgctccaaag cgcggcccgg gaattgatct tgcatttcgc
      961 ggaaagtgcg ctcgtagatg ccgcctggaa aaccggaatg gcggaagtat tttttatctt
     1021 cgaatttggc accggttaca cgcagtttgt ccgcattgat gacgatgatg taatcgccgg
     1081 tatcgacgtg gggggtgtat tcaggtttgt gtttgccacg cagacggctg gcgacttcgg
     1141 ttgcaacgcg acccaagact ttgtcttggg catcgatgac gaaccattcg cgcttcacct
     1201 cgtgaggttt cgctgaaaag gttttcatag tggaaatcca gatagatata gaaagttatg
     1261 gattttaaag acaggatttg attttgtcaa tcgcattacc gcgttacgga aggattttcc
     1321 ggatttcggc agactgcata ctgctttttc gggcggggcg gcggccaatg tgaaaaaccg
     1381 catcgttgcg atgcggtttt gaatgggaat ccccgcgaga gccgtttcgg ccgaatccgc
     1441 ttgaaccttg ctgacaaggc ggctgcctcg ggtagtttcg ggtgcgtccg caaaaggacg
     1501 ctcgcgccca ctactgctcc cggcaacctt aagcgaactt attggttcaa aggaatatat
     1561 gccttcgcgg acaccgcagg gaaaaagggg ttattcctgc cccaagcggg atagtgcctt
     1621 ttggcaggcg ttgtccatat cggttatttt acgcgcaaaa tcgccgattg ccaaatcgcc
     1681 gccgttcagg gaggttttca ataggtcgtg gacgacgttg agcgcggcca taatgacgat
     1741 tttttcgctg tccgcgacgc ggccgccttc gcggatggct tcggctttgc cgttgagcat
     1801 tccgactgcc tgcaacagtg tgtctttttc ttctgccggc gtgttgacgg tcagccgggc
     1861 gtgcatgact tcgatgtaga cttgttcgat gttcatcctt taatccttat tgctgcgttt
     1921 cctgccgttg ggggaggcgc gctgccagtg cgctgatttt ctccctgctc tgttcgagca
     1981 gggcgcggta tcgtgcattt tcttccgtca ggctgtcgat tttgttttgc aggtcttctt
     2041 tgagtttgcc gacttggacg agcagggctt cgctgagttc gtcgacggcg gtctcgtgtt
     2101 cgagtttttg ccgctcgtgc gcccgttcga gttcggcgac ggtttctttg aggcggcggt
     2161 tttcgctgac gagggtttcg aatttttgta ccaacgtata aacgctgctt tcgagttttt
     2221 cgatattttg tttcatgacc ttacctgtct gtatgccgtc tgggggttca gacggcatct
     2281 gtttgttgtt tattcgaaac gcgcgctgcg ttccatcagc ctttcgacga cctgctgagg
     2341 ggtcatttct ttgcggatga gttgcagcag ggtttgggta atcggcatat cgatttggta
     2401 tttgcaggcg gtattgaaga cttcttctat ggtgctgacc ccttcggaaa cgtgcccgat
     2461 ttcgaccagc acctgatgca gttccttgcc ttctgccaaa cccaagccga cgcggcggtt
     2521 gcgcgaaagt gcaccggtac aggtcaagat gagatcgccg atgccggcaa gccccatcat
     2581 ggttttgggc tgcgcgccca ttgcggaggc aaggcgggtg atttcggcca gtccgcgcgt
     2641 aaccagtgcg gcacgggcgt tgagtccgta ttcgagtccg tcggagagtc cggtagcgat
     2701 tgccatgacg tttttgactg aaccgcctac tgccacgccg ataacgtcgg tactgccgta
     2761 aagcctcatg acggtcgtgt tgagctgcgg tacgagttct tcaatccact cttggttttc
     2821 ggaggcgagg acgacggcgc agggcagttg tttggcgagt tcctgtgcaa aactcggacc
     2881 ggaaagtacg ccgattttct tattgtcggg caatacttct ttcaagactt ggaaggtcag
     2941 cagccctgta tcctgctcga agcctttgca ggcggcgagg acggggaggt gtcccgcgcc
     3001 gtactgtttg agcagctctg cgctgcttct caatccggca acggaggtta cgataaggac
     3061 aagtccgctg tctttgagcg cctctgccaa atccgcacac acttccaagg tttcgggaaa
     3121 ggaaaagccg ggcagtccgc gtttgttttc acgcgcttcc tgcatttggc ggacttggtc
     3181 tgcgttgcgc gtccacaggg atacgcggtt gccgtgttgg gaaaaatgca gggcgagcgc
     3241 cgtaccccac gaacctgcgc cgataacggt aattttcatt ggtcgtcttt caacatatca
     3301 ctgccgttca ctttaaaaca atcggtgttt ctctgcaagt gcggtcaggt aaatgccgtc
     3361 tgaaaggcgt tcagacggca ttttgccccg atgcggcact atcagccggt attgcgcaaa
     3421 ccttgcgcca cgccgttgat ggtcaggtgc accatcagca gggcgtgcgg attgtcgggt
     3481 tctttgcgca ggcgtttgag catggcgact tgcaaaccgt tgagcgcgtt caggtatgga
     3541 atcctcaaag cgagcgaacg ggcgaggctg cggttgtcgc gcaaaagttc ttcggtttgc
     3601 agcaggtcga gcagggcttt gcggctgcgt cggtattctt ccttaatcat gccgaagatg
     3661 acttttgcct tttcgggtga ttcgctcaaa ccggcgtagt tttccgccaa ggtgatgtcg
     3721 gttttcgcca tcacttgttc catattggag agcatcgctt ggaagaaggg gttgttttgg
     3781 gcgtgtccgc gcagggcggc gagggtttcg gggctgcctt cgcacaaggt ttccaccgcg
     3841 ctgccgaaac cgtaccaagc cggcagcatg aggcggtttt gcatccagga gaatacccac
     3901 ggaatcgcgc gtaaatcctg aattcgcgcc agggttttgc ggctggcggg acggctgccg
     3961 aggttgaggg tggcgatttc ctgaatcggg ctggtttgca ggaagtagtc gatgaagtcg
     4021 gggtgggtaa tcagttcgcg gtagtatttg aacgatacgt ccgacaatgc ctgcatcagt
     4081 ttcgcatcag ggtctttttt atccggcagg atgctggctt ccaaagtcgc ggcaaccaag
     4141 gtttccaagt tgcgttgggc gttgccgggg tcggcgtatt tggcggtgat gacttcgcct
     4201 tgctcggtaa tgcggatttg tccggcaacg ctgcctgcgg gttgcgccaa gatggcttgg
     4261 taagacgggc cgccgccgcg tccgacgctg ccgcctcgac cgtggaacag gcgcatacgg
     4321 acatcgtatt ttttgaagag ttcgaccaag cccaattccg cctgatgcag acaccatgag
     4381 ctggtaacgt agccgccgtc tttgttggag tcggaatagc cgagcatgat ttcttggatg
     4441 ttgccgcggc tttcgagcag ggcatcatac cagtcgaggc ggaacatggt ttccatgacc
     4501 ggacaggcat tttcgagcgc ttcgatggtt tcaaacagag gcacgatgtt gatgcggctg
     4561 tgcggtttgc cgttttccac cgccaacagg ccgctttctt tcagcagcaa tgccaaggcg
     4621 agcaggtcgc cgggttgttc gcagttggaa ataatgcttt gtgttaaggc atcttcgccg
     4681 aattcgtctt tgattttgcg cgcttcgttg aaaatcgcca attcgcggcg ggtatggtcg
     4741 ctgtatgtga tgaacgggct gtacagcgga cgttggtgac tcaattcgcg caacaaggcg
     4801 gcttgttttt gctcttcgtt caggctgttg tagtcttcca agcctgcgtg ttggaaaagc
     4861 tcggcaacca catcggcgtg tttgcctgcg tgttggcgca ggtcgagcgg catcatgtgg
     4921 aagccgaaca cggacacgga acggatgagg tctgccaaac ggccttcggc aagcaggcgg
     4981 ctgccgttgt cgataaggga acgttgcaat tttttcaaat catcgagaaa tttttgggcc
     5041 gaagcataag gctcgagaaa gccgaatttg cagcccatgc ccaaaccgag cgagcgcgct
     5101 ttgcccatag cgcgcgccat aatgtaggca atggcgcggc ggtaaggttc ttcggtgcgg
     5161 gcgatttctt cgtcaggcga gagggctgcc agtgccatta cgtcgtcgtt gactttgacg
     5221 cggcggatgg aaagcggcag ttcgcggtaa agtttgtcga gttcgctgcg gtaaaaacgg
     5281 aacacggcat cggcgtggcg gcggaaggca aagcgcaggg tttcgccaga aacaaacgga
     5341 ttgccgtcgc ggtcgccgcc gatccagccg ccgattttaa ggatgttcgg aacgcggaca
     5401 tcgggatagg ccgtctgaaa gtcgtgttcc atcttgcggt agagtttggg cagggcttca
     5461 aaaaagctca tcgggaagat ggacacgccg ttgttgattt cgtcgttgac gctgagtttg
     5521 tggcggcgcg tttcgctggt ctgccacaag cccagaagca cggtgtcgat ttcgcggcgc
     5581 agccgtgcca gcgcgtcggc attggtgcag cgttcgcgtt gcggcagcag cgcgcggatg
     5641 cggcggttga aattcaaaac ggtttggcgt tgcacttcgg tcgggtgcgc ggtcaaaacg
     5701 gcggtaacgg acgtattgtc caactgccgc tgcaccgatt tgccgtcggc tttccccgct
     5761 ttgagcctgc ggacggtttc cgtcaggctg ccttctgctg cgttgtggcc ggcatcttcg
     5821 tggatttggc ggcggcgttc gtggtgcacg tcttcggcga tattcagaat ctgggcgaac
     5881 agcccgcagg caagcgtcag atcgtaggtc tgccgttcgt ccaattgcgg caatactttt
     5941 tcaatcaatg ccgcgctgtc gtcggaagtg gacaagagtt tgaccgtttc gacaaccaac
     6001 ggcgaggctt cttcgtgcag gaggttgaac agggactgtt tcaaaaattc cgcgtccgcc
     6061 gccaaagccg cgtccttcgg attgttcagg atatgcagtt gcatgatttt cctctcattg
     6121 ccgtaaatac tgtaaatgta cctcaaatgc cgcatccgtg ccaaaccgtt cacactttaa
     6181 ccactcatgt cccgaaatgc cgtctgaagt tgaacgccgc ccgacggcgg cgttacaatc
     6241 gcccgcaact gttttttccg aacatcatca tgaccgcgac cgaacacgac aacgacgacg
     6301 cactcctgct gcggtacagc cgccacatcc tcttggacga aatcggcatc gaagggcagc
     6361 agaagctttc cgccgcgcat attttggtcg tcggctgcgg cggattgggc gccgccgccc
     6421 tgccctatct cgccgcctcg ggcgtcggca cgctgaccat agccgattcc gacacggtcg
     6481 agctgcacaa cctgcaacgc caagtcgcat ttgacgaggg cgatgtcggc aagcctaaag
     6541 ccgaaacctt ggcaggccgc ctgaaacgca tcaaccatac tgtcgatgtc cgcgccgtca
     6601 acgaaaaact cgacggctgc cgcctgaccg gtttggttca aaccgccgac atcgttttag
     6661 actgctgcga caactacgcc acgcggcagg cggtcaaccg tgcctgcgtg caaacgaaaa
     6721 caccgctggt ttcaggggcg gcggtacgtt ttgaaggaca gcttgccgca taccgtcccg
     6781 acttgcccga ctcgccgtgt tacgcctgcc tgttcgacgg cggatcggct tcagacggca
     6841 tctgttccct cttcggcgtg ctctcgccgc tggtcggcat cgtcggctgc acacaggcgg
     6901 cggaggctct gaaaatcctg ctggaagcgg gcgaaccgtc gcacggcagg ctggcggttt
     6961 accgtgcctt ggaagggggc tggcaatatt tcgacctgcc gcgcaacccc gaatgcccgg
     7021 tttgcggcgc ggcacggtaa aaccctgccg ccgtttcaga cggcatccga acggatgcgg
     7081 cggaacggtt ttaaaaattt aaaaatttac atttctttgc aaaaaaataa acttacctta
     7141 taattgcagt tgttttagca atgtctgttt cgcagactca ttgagtaaga cgttttcccc
     7201 gtaatgtgtt tggccgtctg tcccctttgg gttcggacgg ctttttttgg ctgtgtttga
     7261 atacccggtt ggttttatct gtttgcagcg ggggaagccg ctcatcgccg ttcggacaag
     7321 aaccggtttc atcggataaa aggcattttg tccgactgat taaggttaca tcttagggtt
     7381 gcaccggcgg aatattcaaa cacagccttt atttaaggaa atccggatac ggcggcgcat
     7441 caataatgcg gcggaatctc gtcgcgcagg gaatacggct cttgcgcgtc gggattcctg
     7501 tcctgcattt tttgatacag cagcctcaac tgagcctgct gcaaatccaa cgtctgccgc
     7561 aattccgcca ccatcgcgtt cagaccggag attacgtcct cctgaagcgc ggtttggatt
     7621 tccagttcga caatacggcg ttccaactct tgaaccgcgt ccatttacag caccatcgcg
     7681 gcaatccagc cggcaatcag aagcgggatg ttgtagtgga tgaaggtcgg gatgacggaa
     7741 tcgcggatat ggtcgtgccg cccgtcggcg ttcagcccca tcgtcgggcc cagcgtggaa
     7801 tcggacgcgg gcgaaccggc atcgcccaac gcccccgccg tgccgacaat ggcggcggtg
     7861 gcaagcggcg aaaagcccaa accggtacac agcggcacat aaatcgcggc aataatcggc
     7921 aaagtggaaa aggacgaacc gatgcccatc gttaccaaaa gccccaccac cagcatcgcc
     7981 aacgccgcca tacctttgct gttgccgaat atcgccatac tgctttccac cagcggctga
     8041 atatgcccgg tcgcattcat cacggcggca aaaccctgcg cggcaatcat aatgaagccg
     8101 accatcgcca tcatcttgat gccttcgccg aatacgtcgt ttgccttgtc gcggttaatg
     8161 acccccaaca tcataaatac ggcgaaaccg agcatcgcgc ccaacaccag cgaatcttca
     8221 tacatcaact gtatggcaaa gcatacggcg atggcggcgg cggcaaccag gctgcggtag
     8281 gcggacggct gcggacggtt tgccgcatcg gcgttgcccg ccgtatcggc attgttgctt
     8341 tggtacagtc gcggtttgcg gtagtggaca aacgccagca ggagtccggc cagcattccc
     8401 aatgcgggaa tcgccattgc cgccatcacg ttgatgtttt tcacatcaag ctgcggcgcg
     8461 gcggaatgga tgttgcccaa caggatttcg ttcaaaaaaa tcgcgccgaa gccgtaaggc
     8521 aggaacatat aagtcgtaac cagcccgaaa gtgatgacgc acgcaatcag gcggcggtcg
     8581 attttcaggc ggttaaacac caaaagcagc ggcggaacaa tcatcgggat aaaggcgatg
     8641 tggatgggta tgacgttctg actcataatg cccatcacaa ggatgatgga aagcagcagc
     8701 catttgaccg cgccctcgcc cgaacgcacg ctgtcgggca taccgccccg gttcagcttg
     8761 cggacgaccg cgccggcaag ctgctgcggc aggccggaat gggtaatcgc catcgcaaac
     8821 gcaccaagca tcgcataaga aagcgcaatc ttcgcgccgc cttccaaacc tttgttgaac
     8881 acggggataa tccccgcctg actgacctgt cccgccgcat cggcaatgtt ttgcagcggc
     8941 atacccgcca ccgcgccgcc gacaaacgcg ccgaccgtca ggctcaatac cacgtgcacg
     9001 cgcgacagcg acagcaccag cataacgatt acggcaacta cgactgcatt cattgtttat
     9061 cgctccaaac ctataaatgt ttacatatca aaacacatca taacccaata acggaaaatc
     9121 cgccaatttt gcaaacaatt atttcaaatg cttcatatac ttccccagcg taaccctgtc
     9181 caaaccggcc aaatccggca ggatttccac tcccgaaaaa ccattctccg ccaacacgcc
     9241 gcgcaccgcc gcgccctgat cgaaaccgtg ttccaacaac aaaaaaccgc cttccgccaa
     9301 acggtcgggc gcgccttgcg ccaaggtgcg gatgcagctt aggccgtctg aaaagtcggt
     9361 cagcgcgatt tgcggctcaa accgcaaatc gccttgcgac aaatgtttat cgccgttttc
     9421 gatatagggc gggttggaca cgatgatgtc ccattgcctt tcagacggca tatcggtgtc
     9481 gaaccacgaa ccgtgtgcaa attcgacccg cgcgcccaaa tccgccgcat ttttccgcgc
     9541 cgtttcaagg gcgggcgtgc tgatgtcgga tgcgcgcaca aacgcatcgg ggcgttcgag
     9601 cgcgacggtt acggcaactg cgccgctgcc cgtccccaaa tcccacacgc gcccgttttc
     9661 gggcaggcgc gccaatacgg cttcgaccaa gtgttcggtt tcggggcgcg gaatcagcac
     9721 gttcgggttg actgtaaagc gtctgccata aaattcgcgc acacctaaaa tataggcaac
     9781 cggctcgccg ttcagacggc gttgcgccag cctgtccgcc cgctgtcgga tttcgtccgg
     9841 catttcttcc ccgccccgcg tcaacaactg cacgcgcgta tattccgaaa catattgcag
     9901 cagcatcctt gcttcaattt taggcagttt tgacaagccc aaccattcgt caaacgtcat
     9961 ttttcgtccc gtctgccgcc gatgcggctt gaacattttt tccggctttg cggcacgctt
    10021 gttcaaaaaa tatcattttg cattgaaatt atataataaa ggaaaacacc ttatcgccgt
    10081 ttcaataccg taggaattta tccgaataac agaaacgctc cgccgtcatc ccgcgaaaac
    10141 ggtcatccgg aaacataagg ctgaagcgtt ttatctggaa tgacgatttg gaagtttccc
    10201 gaaattcaaa aacaggcaaa accggacgaa cttgatttcc gcacgcgcaa gaataataaa
    10261 ataaataaaa cgatgagata gttgattttt cctttgaatt tgcaatattt tcggcggctg
    10321 aaaaaaatcc gcacccgcct tcaaatgcgg atacggattt tcttgtcaaa caaacttatt
    10381 cggccaacaa tgcttccggt ttgactttct cgccatacac gggcaagagg gttttttcat
    10441 aggcggcttt cagacggccg tcttttttca tggcggcgat ttcgccgttg acccagttca
    10501 ggaggtcggc gttgcctttt tgaacggcgg gggcgataaa ttcggcagga ccgagattgc
    10561 cgatggcgac ttcaaagttc gggttttctt tcgcccacgc ccacagcagg gcgttgtcgt
    10621 gcgcgagtgc tacgccgcga ccgtctttca gcgcgtcgaa ggtttcagtg ttttggtcga
    10681 atttcaacag cttgacttcg ggatggcttt tggtgaagaa agcgtcggcg gtggtgcctt
    10741 tgttgaccag cagggtttgg tctttcaatt gcgccatgtc ggtaatcggt ttgtttttgg
    10801 gggaaaccac gcccaacgcc actttcatgt aaggatcggc gaaatcgacg gcttcggcgc
    10861 gttcgggggt ttgggtaaag ttggcgagga tgaggtcgac tttgccggaa cggacgtatt
    10921 cgacgcggtt tgcggcctcg gtcaggacga attcgacttt gtcggggctg ccgagcaggt
    10981 ctttggccag gtctttggcg atttcaacgt caaagccttg gtttttgccg tttgcgtcaa
    11041 catagccgaa cgggggtttg tcgccgaata cgccgatgcg gataacgcct ttttctttga
    11101 tggcggcaac ggttgccgca ccgctgcttt gtgaagattg ggcatcgccg gagccgcccc
    11161 cgcaggcggt cagaccgacg gcgatggcgg cggaagccaa aagggctttg agtttggcgt
    11221 tcaatttcat tggaaatctc ctttttgaat gtttgcttgg gatgtttcaa cacacaggac
    11281 gacacataaa gcactgccct atgaaatgcc gtctgaaaag ggttcggacg gtttgcggta
    11341 aatcagtagt ccatacctgc cagaaattgg cgggcgcgtt cgctttttgg tgcggaaaaa
    11401 aaggtttcgg ggtcggacga ttcgacgatg ccgcctttgt ccataaagac gatgcggtcg
    11461 gcaactttgc gtgcgaaccc catttcgtgg gttacgatga gcatactcat cccttcgcgg
    11521 gcgagttcca aaaccacttc caagacttcg cgcaccattt cggggtcaag tgcggcggtg
    11581 atttcgtcca gcaggatgac ttccggattc aggcacaggg cgcggacaat ggcgatgcgc
    11641 tgtttctgac cgccggaaag ttcgcgcgga taggcgtttt tgcggtctag cagtccgacg
    11701 cgttccaaca gtttgccggc ttgcgcctct gcttcggcac ggtcgcggtt ttgtaccttt
    11761 accgggccta agaggatgtt ttcgatgacg gtcatgtggg caaacagttc gtagctttga
    11821 aagaccatac cgactttttg ccgggcggtt tgccaggaaa cgtctttgcc gaattcgccg
    11881 acaccgtcca tcacgatgct gccgccttgg tgcggctcca aaccgttgac gcagcgcagg
    11941 agggtggatt tgccgcagcc ggacgggccc agcagtacga tgacttcgcc tttttccaag
    12001 tccaagtcta aggattggat ggcggttacg ctgccgtatt gtttgtgcag cttgcggatg
    12061 ctcagtaaag ccatgtcagt gttcccattt ttgttcaagt tttgccgcca gtagagatag
    12121 cggccagcaa cagaagaaat acagcataaa aatcaggccg taaacccaaa atgaagcatt
    12181 gggctgcgtc agcaacgagt tttcaataat ttgctgcccg actttgacga cttcgatcac
    12241 gccgataagc caggcgagcg agctggtttt gatcatgcgc gtgaacaggt tgaccgcgcc
    12301 gggcaatacg cggcggatgc tttgcggcag ctcgatgcag cggaatacct gcccccggct
    12361 caagccgggc gcaagacccg attcgacctg gtgtttttca atcgattcca gtgcgccgcg
    12421 caccaagtcg cccatttcgg caacgcccca cagggaaaat acccagacgc agacccaaaa
    12481 tccgccgata tggatgcctg tccagacgga taggccgaaa tacaggccga acagccacac
    12541 caaaatcggc acgattcgga tggtttcgag ataaaaccgt ccgacaaagc ggacaagccg
    12601 gttgcgcgaa cgcaaaacca agccgaacag cgtgcccaat acgcaagaag ccgcaacaga
    12661 gattaaagaa atttgtgccg ttaagagcag gccttcgccc aaccgtgccg cattttttcc
    12721 ttcaaacagc cattcaaacg ccatatttcg cactccgtac gcggttttca atccgccgcg
    12781 ccaacaaaga aacaggcagc aggataatca aataagcggc aaacagcagg aacaaggctt
    12841 cattggtttt gtagtccata ccgatgacgt ctttggtaac aaataacaat tccgcaatgc
    12901 cgaccgtgct gacgacggat gtttctttca ttaaaaacaa tatatttgcg ccgatggcgg
    12961 gaacggcgac cgcccaaacc tgcggcaatt cgacatagcg gaacacttga aagcggctca
    13021 aaccgattgc cttgcccgct ccgacctgcc ctttggggac ggcgaggatg ccggcgcgga
    13081 cagcttccgc catatagctt gcgcccaaga aaaccagcgc gattacgccg caggtgaaac
    13141 cgtcccattt gatgcccatt ttcggcagac cgtaatatag gaaaaacaat tggatcagca
    13201 ggggcgtatt gcgcgacagc tcgatatagg cgcgcgccaa tgcgtagaag gggcggatgc
    13261 ggtatgccgt taccacggcg acgggcaggc cgaacagcaa cgacaaaaca acgccgtaaa
    13321 cggacaattc cagcgtcagc tttgccgcat cggcgaattt gggtacggca tcgattaaat
    13381 aaggccagtt catcagaaat cagcttaacg aaaggcggta ttttaatgaa cttgtaagat
    13441 aatgttaaag aatgcttagg aatatcaaac atcggaaaaa agaataaggc gatgccgtct
    13501 gaaaaccttt cagacggcat cgtgccggat tccgcgtcag attgcgctgc cgccgacggt
    13561 cagcccggca tcgatacgca gggtcggctg ccccacgccg acggggacgc tctgcccttc
    13621 tttgccgcac acgccgacac cgctgtcgag cgcggtatcg ttgcctatca tcgaaacgtg
    13681 tttcagcact tcggggccgt tgccgataat ggtcgcgcct ttgacggggt attgcagcct
    13741 gccgccttcc acccaccacg cttcggacgc gccgaagaca aatttcccgc tggtgatgtc
    13801 cacctgtccg ccgccgaagt tgacggcgta aatgcccttg tcgatggacg cgatgatttc
    13861 ttccggctcg tagctgccgt tttccataaa ggtgttggtc atacgcggca tcgggacgga
    13921 ggcgtagctt tggcggcggc cgttgccggt cgattgcgta cccgtcaggc gggcgttggt
    13981 ttcgtcctgc atatagccga ccaagatgcc gtcttcaatc aatacggtgc ggcgtgtttc
    14041 gttgccttcg tcgtcgatgt tgagcgaacc gcgccggccg gcaatatcgc cctgatcgac
    14101 gacggtaacg cctttggcgg cgacgcgttc gccgatccgg ccggaaaaga cgctggtccc
    14161 cttgcggttg aaatcgcctt ccaaaccgtg tccgaccgct tcgtgcagca acacgcccgg
    14221 ccaaccgttg cccaaaacga cggtcatctc gccggcaggc gcaggacggg attcgagatt
    14281 ggtcagggct tgtttgacgg cggcatcgac aaactgccgc accaaggttt catcgaaata
    14341 agccaagtcg tagcgtcctc cgccgcccgc gccgccctgt tcgcggcgtt cgccctgttt
    14401 ggcgatgacg gtaacgttca ggcgcaccat cgggcggatg tcggcggcgt gtttgccgtc
    14461 cagacgggcg aggtaaacca tatcgtattc gcaggtcaaa ccggccatca cttgcacgat
    14521 gcgcggatcg gcggctttgg cgattgcttc cactttgttc aacagcgcga ctttggcggc
    14581 ggaatcgagg ccggcaatgg ggtcggatgc ggaacaaacc ggcttgccgc gcgtttcaga
    14641 cggcattttg gcggacacct tgccgcctgc cgccccaatc gcgcggacgg cgcgggcgga
    14701 acggtttatc gaatcgatgc acaggctgtc ggcgtaggca aaggcggttt tgtcgcccga
    14761 aacggcgcgc acgcccacac cctgatcgat ttggaagctg cccgatttga cgatgccctc
    14821 ttccaaatgc cagctttcat aagcggtgcg ctggcagtag atatcggcat aatcgacgtg
    14881 gtgcgcaccg atgatgcaca ggcttttggc gaacagttcg ggggaaaggc ggttggcttc
    14941 gagcagccgc gcctgtacgg cggaataggt cggatgcata gtgtcggcgc ataaaaaatc
    15001 aggggcttga ttatacggca tttgttatgg aaatgcgccg tgccgtcgaa aatgtaagaa
    15061 ttttgccaac gcacgttgct ttgtgtaaac ttaaagcctt cttgtcggag tgccgcccgc
    15121 cgggcggctg agattgcgaa agcaaaatcc gtagaacctg tcggggtaat gcctgcgtag
    15181 gaaacaaaac ctccccgccc tttcgggctt ccgttccctt ttccgcactt ccccgaccac
    15241 cttccttctt tttaaaggac gtcatatgtc gggcaatgcc tcctctcctt catcttccgc
    15301 cgccatcggg ctggtttggt tcggcgcggc ggtatcgatt gccgaaatca gcacgggtac
    15361 gctgctcgcc cccttgggct ggcagcgcgg tctggcggcc ctgcttttgg gtcatgccgt
    15421 cggcggcgcg ctgttttttg cggcggcgta tatcggcgca ctgaccggac gcagctcgat
    15481 ggaaagtgtg cgcctgtcgt tcggcaaatg cggttcagtg ctgttttccg tggcgaatat
    15541 gctgcaactg gccggctgga cggcggtgat gatttacgtc ggcgcaacgg tcagctccgc
    15601 tttaggcaaa gtgttgtggg acggcgaatc ctttgtctgg tgggcattgg caaacggcgc
    15661 actgatcgtg ctgtggctgg ttttcggcgc acgcagaacg ggcgggctga aaaccgtttc
    15721 gatgctgctg atgctgcttg ccgtgttgtg gttgagcgtc gaagtgttcg cttcgtccgg
    15781 cacaaacgcc gcgcccgccg tttcagacgg catgaccttc ggaacggcag tcgaactgtc
    15841 cgccgtcatg ccgctttcct ggctgccgct ggccgccgac tacacgcgcc aagcacgccg
    15901 cccgtttgcg gcaaccctga cggcaacgct cgcctatacg ctgacgggct gctggatgta
    15961 tgccttgggt ttggcggcgg ctctgtttac cggagaaacc gacgtggcga aaatcctgtt
    16021 gggcgcgggc ttgggcataa cgggcattct ggcagtcgtc ctctccaccg ttaccacaac
    16081 gtttctcgat acctattccg ccggcgcgag tgcgaacaac atttccgcgc gttttgcgga
    16141 aacacccgtc gctgtcggcg ttaccctgat cggcacggtg cttgccgtca tgctgcccgt
    16201 taccgaatat gaaaacttcc tgctgcttat cggctcggta tttgcgccga tggcggcggt
    16261 tttgattgcc gactttttcg tcttaaaacg gcgtgaggag attgaaggct ttgactttgc
    16321 cggactggtt ctgtggctgg caggcttcat cctctaccgc ttcctgctct cgtccggttg
    16381 ggaaagcagc atcggtctga ccgcccccgt aatgtctgcc gttgccattg ccaccgtatc
    16441 ggtacgcctt ttctttaaaa aaacccaatc tttacaaagg aacccgtcat gacccgtatc
    16501 gccgtcctcg gaggcggcct ttccggaagg ctgaccgcat tgcagcttgc agaacaaggt
    16561 tatcagattg aacttttcga caaaggcacc cgccaaggcg aacacgccgc cgcctatgtt
    16621 gccgccgcga tgctcgcgcc tgcggcggaa gcggtcgagg caacgcccga agtcatcagg
    16681 ctgggcaggc agagcattcc gctttggcgc ggcatccgat gccgtctgaa cacgcacacg
    16741 atgatgcagg aaaacggcag cctgattgtg tggcacgggc aggacaagcc attatccagc
    16801 gagttcgtcc gccatctcaa acgcggcggc gtagcggatg acgaaatcgt ccgttggcgc
    16861 gccgatgaaa tcgccgaacg cgaaccgcaa ctcggcggac gtttttcaga cggcatctac
    16921 ctgccgaccg aaggccagct cgacgggcgg caaatattgt ctgcacttgc cgacgctttg
    16981 gacgaactga acgtcccttg ccattgggaa cacgaatgcg ccccccaaga cctgcaagcc
    17041 caatacgact gggtaatcga ctgccggggc tacggcgcga aaaccgcgtg gaaccaatcc
    17101 cccgagcaca ccagcacctt gcgcggcata cgcggcgaag tggcgcgggt ttacacgccc
    17161 gaaatcacgc tcaaccgccc cgtgcgcctg ctgcacccgc gctatccgct ctacatcgcc
    17221 ccgaaagaaa accacgtctt cgtcatcggc gcgacccaaa tcgaaagcga aagccaagcc
    17281 cccgccagcg tacgttccgg gctggaactc ttatccgcgc tctatgccgt ccaccccgcc
    17341 ttcggcgaag ccgacatcct cgaaatcgcc gccggcctgc gccccacgct caaccaccac
    17401 aaccccgaaa tccgctacag ccgcgaacgc cgcctcatcg aaatcaacgg ccttttccgg
    17461 cacggcttta tgatttcccc cgccgtaacc gccgccgccg tcagattggc agtggcactg
    17521 tttgacggaa aagacgcgcc cgaacgtgat gaagaaagcg gtttggcgta tatcggaaga
    17581 caagattaaa gccgcccgaa aggacaccct atgaccttcc cgcccctaaa atccctactt
    17641 aaattctacg ccgtcgttcc caccgccgat tgggtggggc gcatggtcaa agcaggtgcc
    17701 gacacggtgc aactgcgctg taaaaccttg cacggcaacg aattgaaacg cgaaatcgcc
    17761 cgctgcgtcg ccgcctgtca aggcagccgc acacagcttt tcatcaacga ccactggcgc
    17821 gaggcaatcg aagcgggcgc atacggcgta catctcgggc aggaagacat ggacaccgcc
    17881 gaccttgccg ccatcgccgc cgccggtttg cgtttgggtt tgagtacgca ctccgtcgcc
    17941 gaactcgacc gcgccctgtc cgtacacccc ggctacatcg ccagcggcgc gattttccag
    18001 accacgacca aacaaatgcc caccgccccg caaggcttgg acaaattgcg cgaatatgtg
    18061 gaacaggctc gcggcacgcc cgtcgtcgcc atcggcggca tcgatttgaa caacgcccga
    18121 gccgtgctgg ccaccggcgt ttcctcactc gccgccgtcc gcgccgtaac cgaagcggca
    18181 aatcccgaag cggtggttaa agcgtttcag gctttgtggg atggataaaa ccgaaagaag
    18241 aaaattcaat tgccgtgtag gcaaaactta gcccgttatc gcaaatatgc ttaactttaa
    18301 atgtggcata tcatcaaatt ccgtcattcc cgctcaggcg ggaatccgcc gtaaaacttg
    18361 agaaaccatc atttgaaaaa cagtttccga atttcaaaaa tggattcccg cctgcgcggg
    18421 aatgacggca accggccggt tgcgtatcaa aaaataaagt aattcggcta gatatagtgg
    18481 attaacaaaa atcaggacaa ggcggcgaag ccgcagacag tacaaatagt acggaaccgg
    18541 ttcgcccggt gcttgggcac cttagggaat cgttcccttt gagccggggc ggggcaacgc
    18601 cgtaccggtt tttgttaatc cgctataaat acagaaacat cgagaaacca tgaacatcat
    18661 cttaaacggc ggacccgccg aacttcacgg cacaagcgtt gccgacctca tcgcccaaac
    18721 cgcgccgcaa aagccctttg ccgtggcggt caacaccgtt ttcatcccca aaggcgcgta
    18781 tgcggaaacc gttttacacg aaaacgacaa aatcgacatc gtccgccccg tcgtcggcgg
    18841 ctgaatgccg tctgaaaccc caaaggcacg ccgccggctt tcagacggca tcgcgtccga
    18901 caaccatacc aaagaatcca tcatgctcac cctgtacggc gaaactttcc cttcgcggct
    18961 gctgctcggc acggccgcct acccgacccc tgaaatcctc aaacaatccg tccgaaccgc
    19021 ccggcccgcg atgattaccg tctcgctgcg ccgcacggga tgcggcggcg aggcgcacgg
    19081 tcaggggttt tggtcgctgc ttcaagaaac cggcgttccc gtcctgccga acacggcagg
    19141 ctgccaaagc gtgcaggaag cggtaacgac ggcgcaaatg gcgcgcgaag tgtttgaaac
    19201 cgattggata aaattggaac tcatcggcga cgacgacacc ttgcagccgg acgtgttcca
    19261 actcgtcgaa gcggcggaaa tcctgattaa agacggcttc aaagtgctgc cttattgcac
    19321 cgaagacctg attgcctgcc gccgcctgct cgatgcgggc tgtcaggcgt tgatgccgtg
    19381 ggcggctccc atcggcacgg gtttgggggc ggttcacgcc tatgcgctca aaatcctgcg
    19441 cgaacgcctg cccgacacgc cgctgattat cgacgcgggc ttgggtttgc cttcccaagc
    19501 ggcacaagtg atggaatggg gttttgacgg cgtattgtta aacaccgccg tttcccgcag
    19561 cggcgacccc gtcaacatgg cgcgcgcctt cgcactcgcc gtcgaatccg gacggctggc
    19621 atttgaagcc gggccggtcg aagcgcgaac caaagcccaa gccagcacgc cgacagtcgg
    19681 acaaccgttt tggcattcgg cggaatattg aaaaaggcgg caaaaatgcc gtctgaaggc
    19741 ttcagacggc atcgcggccc caaacgggca aaccgccatt ccccggcatc acggctttgt
    19801 cgtgaggaac agggaaaccg gccggaaaac cttgccgccc gccccgacac cgcaaccaac
    19861 gaaacacccg gactccccgg cgcgcaggct gctgcgcaag ccctaagtac ggcaatagaa
    19921 gggagttttg tcgtttgaat acatttaaaa atacctcggg gcatccgtaa gccttcatcc
    19981 gcaacggttt caccgctttt gcatccccga atccgcgctc aaacaccccc gaatggcaac
    20041 cctgtccgca ccaaatcgga cggttgttca aacacgggca accttatttc cgtcaggcac
    20101 gaagcccccg tccatgcctg ccgaccccga tttgtccggc gcaatgaaag tttgccgacc
    20161 caaatcacaa acatcggcgg acagattaat ttgtttattt ttcatcgcat tacaaaaaat
    20221 ccgcatttat ttttaaattt ttattgataa ttattattat tagcgtataa tcaaaaccac
    20281 tcggaagccg tccgttccga accattaaac actgtattcc ctcacaattc actttcacac
    20341 ttggagtcgg catatacgag acatacattc cctttttaat cagatactca aaaccgaaac
    20401 gccaaaccca ccctagcggt gggtttggcg tttttggtct gcacttattt gcaagacttg
    20461 aggttcagtt tgccgtatag ggacgtgatt ttacggattt cgtccgcatc ggcggcattc
    20521 acgcccgtaa acaaaaccgt catacgcgac acgctcaaag aatcgtcctg cctgtcggct
    20581 tcggcaaagt gttcgacaat atgcgccccg ccgaatccgg catcggcaag tcggttttgc
    20641 agggcttggg cgttttcccg gctgttgccg acacccaaac tcaatgcgcc gtcaaacggt
    20701 atggggttga aacctttggc agacagctcc gccgcctgat tttcggcatc ggcggaaacg
    20761 ggcaggacga cgcggtaggt tttgtcggca ggtttggctt tggcggtgcg tttttcgacg
    20821 ctcctgctgg caacgtgcga ccatttgccc aaaagccctt tgatgcggtg gtagtcgtct
    20881 tcgtccatcg tgaggcttgc ctgcgcggcg cataaggcat ccgccgcgcc gttttcacgt
    20941 tccgcctgcg ccttttcggc ggcgagtttt tcgcggcggg ctttttcttc acgctgtttt
    21001 ttctccctca gttttttctg ttccgcttct tttttcaagc gcaactgctc cgcctgttct
    21061 tcgctcagga tgtcgcccgg tttgagcagt gccgccgtat cctccacgga tgccgccgca
    21121 ttgccggcgg cgggcgttgc ggggggcgtg ttttcgacgg cccggttttc cggcacgccg
    21181 cccgccgctt taacggccaa tttatagccc accgtgccgc cgaatacggc aatattgagt
    21241 accgccaaaa gggtgaagag ccatttcatt agaatttcct caatgtttga aaccccgccc
    21301 gcccgggcgg cagtctgtcg ggcggcagaa tccggacaga ttcggacgga tgccgccccg
    21361 tgttgaaaaa aggcatattt tttaagcgtg ttccgattcc ccgccttcgg cggcaatcag
    21421 gttcagcagc ccgtggatga cgaggttgtc cgccacgcgc acggtatttt ccgccaaaaa
    21481 tgcaggcggc agggcttcgg cgactttcgc cgcgccgccg ccggtaatga tgacatcgac
    21541 aggcttgccc gcgccgtttt tttctttcaa acggccgtgc atcatcatta tcgagccgca
    21601 aaccgcgtcc atcatgccgc ttgcgacggc gttgcccgtt gtggtcggga aagggtaacg
    21661 tttgccggcg gggcggttga ggttggcggt tcggacggcg agcgattctt tcatcaggtg
    21721 gaagccgggc atgatggttc cgccgagata atgtccgtca tcggtgagcg cgtcaaccgt
    21781 taccgccgtg ccgcaactga cgacgacgca ggcgttgcgg ctgaagcggc ggctgcccaa
    21841 ggcgttgaac caacggtcgg aaccgtgttc ttcggggtgg cggtagtggt tgcgtatgcc
    21901 caaagcctgt gcggaagacg gcagccactc gatttttcgg gcgagctgtt ccttcacttg
    21961 tgcctttttg gattctccgc acacggcgca accgacgatg cggacatttc catccgcctt
    22021 ttccgcccac tccgcgccca aaggcgacaa atcgcggtac ggcgcgctgc cgacggttgc
    22081 gaacgtgccg ttttccaccc acgcccactt gagccggctg ttcccgccgt ccaacagcaa
    22141 aaaacgttcc gaatcccgcc gcttcggcac ggaaaccggt ctgtcgtcgg gccgcaggct
    22201 gatttcgccg ctgacgaccg tctgttcgcc ctctgccgtt tccaagtgca gaacgcctcg
    22261 tccgtccacg cctttaaccg tgccttcgca cacggtttcg ccgtcgcgca acagcaatac
    22321 cgccttgccg tggtcgcggt tggccgtttc atactcattt aaaaatggcg cgaacccttc
    22381 ttccgcatat tgttccaaca ccgcgcccag ttccgcaagc aatgtttcca gcaatacggc
    22441 ggcatcggca ttgccccgcc gcgatgccgt ctgaaacagc gactgcacgg aagcggcgtt
    22501 ttccacttcc ttgggcagca cgaaattgat gccgataccg accacggcaa ccgttttacc
    22561 gcccgccctg actgtttcaa tcagaatgcc gcccaatttg tcgcgtccga cgaccaaatc
    22621 gtttggccac ttgatttgcg tttccaaacc caaacacccc aaagcgcgcc ggcacgcaag
    22681 tgccgcaaca ggcgacagcg aacccaactc atactgcggc cggtcaaacg cccagccgaa
    22741 actgaacatc aggcactcgc ccaaacggtg cgaccacttc cgcccctgcc gccccctgcc
    22801 cttactttgc aggtgggtca cgcatatggt tttgtgcgcc ttgtccggcg caatccgcgc
    22861 caattccagt atctcgtcgt tgctggacgc gcactcgtgc ttcaatgccg tctgaaaacc
    22921 cgacctttcc cccagatcgc gcaaaccttc ggcatcgaaa accgccaagg ggcgcaccag
    22981 ccgccaatag ccgtcgtgtt ggcgcaacag cccgcgtata tgcgccggca tctgctgcca
    23041 aaaaccgttg agctgctgcg gcttcatgtc cgcctcacgc gccaattgcg atacgtgttg
    23101 cggcaaaccg tcggcaagct ccgccaacac ccgccagtgc gaaggcttca aaaccgtcat
    23161 tttccgccct ctgccgcacg gatttttgcc aaagtcttcg ttgtcgaagt ctgatgcaga
    23221 aacggaattg aaaacacctg accgccgcgt gccagcgttt ccgccgcacc gacaatctta
    23281 tccacgaccc aatcgccgcc cttgaccaac acctccggct tgaccgcctc aatcaacgcc
    23341 gccggcgtat cctcgtcaaa ccaagtaacc aaatccacac tttccaacgc ggcggcaacg
    23401 gcggcacggt tctccaaaga attaaccggg cggtcgccgc ccttgcccaa acgccgcacc
    23461 gaagcatcgg tattcaacgc cagcaccaac gccgcccctg ccgaacgcgc ctgcgccaga
    23521 taagtaacgt gccccctgtg gaggatgtcg aaacagccgt tggtaaacac cagcgggcgc
    23581 ggcaacaacg ccaaacgcgc cgccaacgcc tcgggcggac agattttcga ttcaaaatca
    23641 gggacagacc aagcgtcaac catcaaagcc tccgacaaaa accataaaag acagaaaaac
    23701 ccacatgata cagaagcata tgcgaaaggc aaagccggcg gcgcaaatgc cgtatgaagc
    23761 ggtttccgta tgaccggccc ggctttcaga cggcataccg ccgcaccggt acgacggcgc
    23821 ggacagtacg cgcaaacagg aaaagacccg taccgaaaag tacgggcctt tatctggggt
    23881 ggctgatggg gctcgaaccc acgacaaccg gaatcacaat ccggggctct accaactgag
    23941 ctacagccac cataaaaacg gttttcaatc aaattcttgg cacgcccgac aggaatcgaa
    24001 cctgtaaccc ccgacttaga aggtcggtgc tctatccggt tgagctacgg gcgctcatgc
    24061 cgattcgtgc tgattgattg gtcggggcgg tgggattcga actcacgacc ctctgctccc
    24121 aaagcagatg cgctaaccgg gctgcgctac gccccgactt gaagaagcgg aatatacagt
    24181 tcagggaaag atgcgtcaac atttattttc aaaacaccaa gatgaaaaat atagtttttt
    24241 gatttgaaaa aatatttaat ccgtccaaac agccgtattt tatttcgggg caaatttatt
    24301 ttcggcattc tgctgtaaaa acaaacggaa aatgcgataa ttttcagcat tttctacctg
    24361 tttaacaaaa ggacggatat gtcggcacaa ctgatcaacg gtaaagaagt ttcgcaaaaa
    24421 cacctgcagg cgattgccga agcggtggcg caacgccaac aggacaatct gcacacgcct
    24481 tgcctggccg tggttttggt cggaggcgac cctgccggcg cagtttatgt ccgcaacaag
    24541 aaaaccgcct gccaaaaatg cggcatcaag tcgctgtcgt acgaactgcc cgaatcaaca
    24601 tcgcaggaag aactgctggc attggtcgac cgtctgaatg ccgattccga agtggacggt
    24661 attctggttc agcttccact gccgaagcac ctcgacagcc aagcgatctt ggaacgtatt
    24721 tcgccggata aggacgtgga cggcttccat ccttacaatg tcggcaggct ggcggtcaaa
    24781 atgccgctga tgcgcccgtg tacgcccaag ggcgtgatga cgcttttgga ggcttacggc
    24841 attgatccga aggggaaaaa agcggtcgtg gtcggcgcgt cgaatattgt cggccgcccg
    24901 caggcgttgg aattgctgct ggcgcgcgca acggtaacgg tctgccacag tgcgaccgaa
    24961 aatcttgccg atgaagttgc cgccgccgat attttggtgg tcggcgtggg cattccgaac
    25021 tttgtcaaag gcgggtggat caaacccggc gcggtcgtta tcgatgtggg catcaaccgt
    25081 ttggacgacg gcagcctgtg cggcgacgtg gaatttgaaa cggcaaaaga acgggcggcg
    25141 atgattacgc ccgttcccgg cggcgtgggt ccgatgacga ttgccacatt aatggaaaac
    25201 actttgcacg cagcttcgct gcacgatgct tgagcggttc tgaagataaa aatgccgtct
    25261 gaaagccttt cagacggcat tttgccgcgt ccgtttattt gggcagcttg acgacaaccg
    25321 tatccgccaa tatgtcgtaa agcgtgcggc ggtcgcgttt gaccataaag agcaggacaa
    25381 agttggcaag gaatgccagc aggttgatgg cgttttcccc gttttcacct actgcaagac
    25441 cgataacggc ggcaataatg gcaaccaaaa ccgaccacgc gatttcgcgt accaaaaccg
    25501 tgccgacaaa acccggattg cggccgtcgg ttttcaacac gcggattctc atgattttct
    25561 tacccaatga ctgcccgtcc ctgctcatat agtagatttg gatgacggtg tacgccaaaa
    25621 tgcccgccag tccgacccaa aaggaagtca tgcccaaaag cagcccgaat atttcctcac
    25681 ggccgccaat cctgccttca tttttgacgg cgaaggcaat cagtccgaca aacggcacca
    25741 acaaaatcaa aaaggtaaac aattggttca gcagcgcggc aagtatccgg tcgcctgcgc
    25801 cggcaattcc gacttcaatt tcctgcccgt tgcggttgtc ggataccgcg tcggtgtagt
    25861 cgtttttttc ttccatatcc gttcctgata attgttctta aacagatgga attctaccgc
    25921 cctactgctg caaacgccaa tcccaaaaag aaaattcgat aaagaacttt acattttccc
    25981 aatacggcgt taaaacgctt tctttacgcc atacataatt ttattaacga ttttcctcaa
    26041 ggagcaatac atgaaagtag gtttcgtcgg ctggcgcggt atggtcggtt cggttttgat
    26101 gcagcgtatg aaagaagaaa acgacttcgc ccacattccc gaagcgtttt tctttacctc
    26161 ttccaacgtc ggcggcgcgg cacctgattt cggtcaggcg gctaaaacat tattggacgc
    26221 gaacgacgtt gccgagctgg cgaaaatgga cattatcgtc acctgccaag gcggcgatta
    26281 caccaaatcc gtcttccaag ccctgcgcga cagcggctgg aacggctact ggattgacgc
    26341 ggcgtcctca ctgcgcatga aagacgacgc gattatcgcc ctcgaccccg tcaaccgcaa
    26401 cgtcatcgac aacggtctca aaaacggcgt gaaaaactac atcggcggca actgtaccgt
    26461 ctccctgatg ctgatggctt tgggcggcct gttccaaaac gatttggtcg aatgggcgac
    26521 cagcatgacc taccaagccg cttccggcgc gggcgcgaaa aatatgcgcg aactcatcag
    26581 cggcatgggc gcgattcacg cccaagtggc ggacgagctt gccgatcctt ccagcgcgat
    26641 tctcgatatc gaccgcaaag tgtccgattt cctccgcagc gaagactatc cgaaagccaa
    26701 cttcggcgta ccgctcgccg gcagcctgat tccgtggatt gacgtggatt tgggcaacgg
    26761 ccagtccaaa gaagaatgga agggcggcgt ggaaaccaac aaaatcctcg gacgcagcgg
    26821 caatccgacc gtcatcgacg gcctgtgcgt ccgcatcggc gcgatgcgct gccacagcca
    26881 agccatcact ctgaagttga aaaaagacct gcctgtttcc gaaatcgaag cgattttggc
    26941 aggcgcgaac gactgggtga aagtcgtccc caacgaaaaa gaagccagca tccgcgagct
    27001 gacgcccgcc aaagttaccg gcacgctgtc cgtccctgtc ggacgcatcc gcaaactggg
    27061 catgggcggc gaatacatca gcgcgttcac cgtcggcgac caacttttgt ggggtgcagc
    27121 cgaaccgatg cgccgcgtgt tgcgtatcgt gttgggcagc ctgtaagccc tgtttgaatg
    27181 gaaatgccgt ctgaagcctg tttcagacgg tattttcctt gcaaccccgg ttaaccgaaa
    27241 ttccgataaa gcgaccgttc acgccagcaa catttcctgc atcagcttca taccccactg
    27301 ccagccgccg agcataccgt tcaaactgcc cgaatgcggg gaaaccaaca ggcgggcgtt
    27361 ccacaaatcc gcctgttttt gcgcccaacc gtgcggcacg ccgccgtgtt cggacaccac
    27421 caatgcggca cggcaaggac agcggacgcg ttggaaagtg tgttccgcat cgtcgggaaa
    27481 aatatcggga cgcggagata cgagaatgat accggcgagt ttcttctgcg tcaggatgtc
    27541 ggcgcggtac agccacgcca agaatgcggc cgcgcccgcg ccgtgtgcga caacggcgat
    27601 atgcctgccc tgtatccgtt cgaatgccgt ctgaagcgcg ctttgccacg cttccgtgct
    27661 gccgtttgcg gacgcttcgg acatctgcac aacgggataa ctgaccgccc aacggtctat
    27721 ccacatttcc gcttcatccg catcgcgtat cagccacagc gtcaaatcct caagctcgaa
    27781 actttccatt gtccgcgact atttgagcag gtcccggagg gtaaaggcga tgagcagcga
    27841 agcgggtacg ctcaatatgg cgcagacggt caggcagaca aaaatattca ccacccgccg
    27901 ccagcctttc caacccaaac atttggccgc aatcagcagg cagggcagac aaatcagcag
    27961 ccacaccaac gcccatatcg ggtttgcctt ggtcggcgca agccagcctt gcatccgcga
    28021 caacataaac accgcccaca ccaatatggg caggataaac gcagcgacaa cccatgccgc
    28081 gcctattcct gtttttccgt ccacattcca atcatattta cccaaaacct tattcggcag
    28141 catagtcata ctccacaact aaaggggcgt gatccgagaa tttttcatct ttataaacgt
    28201 gtgcggacac ggctttggcg gcaagttcgg gcgtaaccat ctgataatcg atgcgccacc
    28261 cgacatcttt cgcatacgcc tgcccgcggt tgctccacca tgtataaccc ggcacatcgg
    28321 gatagagcgt gcgccacatg tccgtccagc ccagcgtatg gatgactttg cctatccact
    28381 cgcgctcttc gggcaggaag cccgaatttt tctgattgcc tttccaattt ttcaggtcga
    28441 tgttttggtg ggcgatgttc cagtcgccgc agacgacgat gtcgcgccct tcgtttttca
    28501 tcgcttcgag catagggtaa aacgcatcga ggaaacggta tttcacctgc tggcgttctt
    28561 ccgcgctgct gccgctgggc aaataaagcg aaatgacgcc caacctgccg aaatcgcaac
    28621 gcacaaaccg cccttcgcgg tcgaattcct caatgcccat gccgatttgc acattgtcgg
    28681 gtttgcgttt gctgtacacc gccacaccgc tgtaaccgcg cttctcggcg caatgccaat
    28741 agccgtgcat cccgtgcgga tttttcatat cggcagacaa atcagcctcc tgcgctttga
    28801 gttcctgcac gcagacaatg tctgcgcccg atgcggcgat gtattcgtaa aaaccttttt
    28861 tgtaggcgga gcggatgccg ttgacgttgg cggaaatgat tttaagcata ataaaaataa
    28921 gttctcacaa tgttcccata cacaaagcgg cacccggtgc gccgcccggt atttcccatt
    28981 cggtcctgcc tgctgaaaac ggcggggctt caagcgggaa atgccgtctg aaaacgaaaa
    29041 aagggcaaaa ggcggtactt ttgccctttc cgatacagtt caaccgcgcc gccaagtcgt
    29101 gccgccggcg ctgtcttcca aaatgatttt gtgttcgttc agaaggtcgc ggatgcggtc
    29161 ggactccgcc cagtttttat ccgcgcgagc ctgtttgcgt cgggcaatca agtcttcgat
    29221 ttcttcgttg gagaggccgt ctgaaactgc gccgccttgg aggaactcaa tcgggttgcg
    29281 ttgcagcagg ccgatgatgc cgcccaaagc tttcaggcag ccggcgaggt gtgcgtcatt
    29341 ggttttgttc acttcgcctg ccagctcaaa caacacggca accgcttcga ccgtaccgaa
    29401 atcgtcgttc atggcggcgt agaaacggcg ggtgtagccg ttggcgtttt cagacaaatc
    29461 aaactcagcc gccggtgtgt ttttcaaggt ggtgtacaga cgggtcaacg cgcctttcgc
    29521 gtcgtccaaa tgcgcgtcgg agtagttcaa cgggctgcgg tagtgggcgc gcaggatgaa
    29581 gaaacgcacg acttcggggt cgtattgttt caatacttcg cggatagtaa agaagttgcc
    29641 cagcgatttg gacatttttt cgccgtccac acggatgaag ccgttgtgca gccagtattt
    29701 gacgtggctg gcaatacttc gaccgtggtg ggtttgcgcg tggtcatgac cgcaggtgtg
    29761 accgctggca ccgacgcttt gggcgatttc attttcatgg tgcgggaact gcaaatccgc
    29821 gccgccgccg tgaatgtcga acgtatcgcc gaacaggttt tcactcatcg cggaacattc
    29881 gatgtgccaa cccggacggc cgttgcccca cgggctttcc cacgccggtt cgcctgcttt
    29941 cgccgctttc cacaatacaa aatcaagcgg atcgcgtttg aaaccgtcca cttccacgcg
    30001 ttcgcccgca cgcaggtcgt ccaacgattt gcccgataat tgtccgtaag cggcaaactc
    30061 gcgcacggcg tagtaaacgt cgccgtttgc ggcaggatat gccttgccgt tttgaatcag
    30121 ggtctcaatc atggcaatca tttgcgggat gttttccgtc gccttcggct cgatgtcggg
    30181 acgcaacacg cccaaagcat cggcatcttc gtgcatcgcc tgaatgaaac gcgcgttcag
    30241 ttcgccgatg gtttcgccgt tttcagccgc acgggcgatg attttgtcgt cgatgtcggt
    30301 gatgttgcgc acataagtga gcggataacc gcactcgcgc aaccagcggg caatcatgtc
    30361 gaacaccacc atcacacggg catggcctaa gtggcaatag tcgtaaacgg tcatgccgca
    30421 gacgtacata cgcacgtttt cagggtcgat gggggcgaag ggttcttttt gacgggtaag
    30481 ggtgttgtag atggcggtca tattcatcaa gtaagtttag aaatgagtaa cagtaatgtc
    30541 atatccgcga ttttgggcga aatctaaaaa ttcattggct tcattaacgg caggaaattc
    30601 acgcataatt tcagttttaa tattttccaa caacgcttct gcaatcggat attggcctct
    30661 caatgctttt tcgtaccaac ttatcaaatc atcctcagtt acgatgtttt gaattcggct
    30721 tttccagcct atttgcgtca gtaatgaaac aatcaccgat tgttctgcct ttttgcagac
    30781 aatgacaatt ctatctgcgc taatggagga tacaatatct tctgccaact cttcgtctaa
    30841 agagagatgt ttgacctgta tggccaatcc gaagttagac cacatatcca accctctatc
    30901 ggcagcattg gttacgccta cacgatggat ttttgcagga agttttaaat gctcattttt
    30961 cggcatagtg atgatttttt cggcaaaatc ttgatattcc tcccataaaa acaggttttc
    31021 cttaggaaaa tcaattgaaa ccgttatgcc taattctgaa accaatgcat caaacaacgc
    31081 ataaacaacg atttcatata tcttgtctat acttcttttc aatcccggct cgagccaaaa
    31141 taaatttaga aattcagaca gttggaagga gtatctgtct gtattgccga cataagccaa
    31201 tgcttcgctc atttgggaaa aacgattgaa aaactgttta taaatgtacg attctacccc
    31261 gccgtccgac tgtctgttta atgttcccaa taccgctagt ttttcaggcg gtattgcatt
    31321 tttttcaaac agattatctt ggaattttgc agatgaagta gaaatccgcc ctaaaaaccg
    31381 acggcagatt tcatccctcc agcgtttaga ttggttgcgg taagtatcta aatttaaaaa
    31441 atccaactgt tttatacaac ggtcatgata taaaatttct gcaatttgaa tgggtttata
    31501 aaggtggaca cgggattttt tgataatgcc gtccaatgct tctttggctt gttgttcttc
    31561 aagcgtcatc ctgcctccaa taaatccaat tgcccttttt gttcgacctt gccggaaaga
    31621 gaagcgagca tattttccgc gatggcttct attacaggga cggatacaga atttccggcg
    31681 actttcctga cttgcgagta ggggatattg atttcaaaat catcgggaaa accttgtaat
    31741 cttaacattt cccttcctgt tagccttctt actccgttta ccaccaaata attgtaactt
    31801 cccccggccc ttaaggcaca ggaatatgga agtgcggaaa cattcccgcc aatattttca
    31861 tgccaaattg atggggtggg cggagctttt tttaaggctg ccaaacgttt ttgtttcaag
    31921 gtatctgata aaaaatagct tggttcgaca tctcgatcgt tttccagcag ttcgcccaat
    31981 ggccgatatt ggtttatggg ttcgggaaag taaaaaggga tgttgtctga aaaacccaca
    32041 atataaattc tctcgcgttt ttgcggcaat ccgaaatcca aagtatttaa aaccttaaaa
    32101 taaaccgtat aaccaagctg tttaagggtt tctaaaacaa tacggaaagt cctgcccgaa
    32161 tcgtgcgtag tcagccgctt aacgttttcc agaagaaaag ccttcggctg tttggttttc
    32221 aggatttcgg caatattgaa aaacaatgtt ccgcgcgtat cttcaaatcc caatccctta
    32281 cctgcgatac tgaaaggttg gcacggaaat cccgcaagca gaatatcatg atcgggaata
    32341 tctgaaggat cgatgccgtt aatgtcgcca aaaggttttt ctccaaagtt tgcttcatac
    32401 acttgtcggg catatttgtc ccattccgat gagaatacat tggtgcaccc gtatttttca
    32461 aagcctaggc gtattccgcc aatgcctgaa aataaatcta ttgttttgta catagcacat
    32521 ctctgcagaa tgagccgcct gaaaactttc agacggcctt gtccttttac tccggcttaa
    32581 acacgccagt atccgtttta ggctgctgtt cgataatttc aacatttgcc gctgctttct
    32641 ccgcttcggc tttttcagcc tcgatacgtt ttttctcggc caggtattgg ttgatttggt
    32701 gtaccaactc ctgcgtgcct tgatgtgtca gcgcgctgat ttggaagagg cgcggggttt
    32761 ccatgtcgaa ttggaaacgg tcatcaggtt cggggtagtc ccagccgacg gcttcgagga
    32821 aggcggctgt tcgcgcccgg gcttcttctt cgtcgagcat atcgagtttg ttcagcacca
    32881 gccagcgcgg tttgccgtaa agttcttcgt cgtatttgcg taattcgttg atgatggcga
    32941 gtgcttcttc ggcgggattg acggtttcgt cgaagggtgc caaatcgaca acgtgtaaca
    33001 gcagaccggt gcgtgatagg tgtttgagga agcggtggcc gaggcctgcg ccttctgccg
    33061 cgccttcaat cagaccgggg atgtcggcca tcacgaagct gtggttttcg tcgatgcgta
    33121 ccacgcccaa gttcggatgc agggtggtga aggggtagtt ggcgattttg gggcgtgcgg
    33181 cggagacggc ggtaatcagg gtggatttgc cggcgttggg catgcctaac aagccgacat
    33241 cggcgaggac tttgagttcg agttgcaggg aacgggtttc gccttcttcg ccgggcgtgg
    33301 attgttttgg ggcgcggttg acggaggatt tgaagtggat gttgcccaag ccgcctttgc
    33361 cgcctttggc gaggcagacg cgctgtccgt ggtaggtgag gtcggcaacg atttcgtcgg
    33421 tgtcgaggtc gcggataagg gtgccgacgg gcattttgag gacaatgtcg tccgcacctg
    33481 cgccgtagcg gtcggaaccg tggccttttt cgccgttttt ggcttggtag cgtttgacga
    33541 agcggtattc gacgagggtg ttggtgtttt cgtcggcttc tgcccagacg ctgccgcctt
    33601 tgccgccgtc gccaccgtcc gggccgccgc ggggtacgaa tttttcgcgg cggaaactgg
    33661 ttgcgccatt accgcctttg cctgcggcga cttcgatttt tgcttcgtcg atgaatttca
    33721 ttaaatgctc ttgtttgttg gttttaaata gggtttcagg cggattgcca tatgttttga
    33781 tgccgtctga acagattttc tgccgacatt ataaggtata agcggtattt caatataccg
    33841 cggagaagct atttgttctg cccatcttaa tgaattttta agcaaatctt cagcctgcaa
    33901 acaaaatatg tccaacttct ttggtacaat cgcgcctttt tgacattccg acccgacgga
    33961 atgtccgttc aaaccgttac atatgataag gattttttta tgaacacaaa ccaacctgcc
    34021 gtttacgacc cgttgacacg cgcgctgcac tggctgaccg ttgccggctt catcggcatt
    34081 ctgaccacca ttgtcctgtg gacaatttac gaagaggcgg aatgggcggg cagcctgttc
    34141 ggcctgcaca aatctttcgg tttcctcatg ctgacggtga ttgcattgcg catcgtgtgg
    34201 gcggttgcca accgcgccaa gcgtccgcaa agcgacagca aggcggcagc ggcaggacac
    34261 ggcattctgt atctgctcat gcttgccgtt cccgttatcg gcatgatccg ccaatacggt
    34321 ggcggacgcg gcccgttgaa agtgttcggc gttgaagtaa tgcagggttc gccggaaaaa
    34381 atcgagtgga tggcaaactt gggcaacacg ttccacggca atttgggctg gctgctgttt
    34441 gccgccgtcg tcggacacgt cgccatggtc gtcgtccatc gtgttcaagg caaagacgtg
    34501 ctgtaccgca tgacggggcg tgtccgttga ttccgttcgc actatggtgc cggtccatcc
    34561 ggcatcattt gtttttccac gacagtgcca aatcgtacaa agcctttttg ccctcacctg
    34621 taatcttggc ggcaagctcc gccgcctgct tggtcggcag ctcggccgca aggattttca
    34681 tcgcattttg cgcagactcg gacaagcctt cgtgtttttc atcctgcgcc ggataaagca
    34741 ccaacaccat ctcgccgcgc gattggttgc cgtccgccgc caatgccgtc tgaatttccc
    34801 caaccgtgcc gcttaagaac gtttcaaacg ttttcgtgat ttcgcgcgcc agcatcagac
    34861 ggcgttcggg gaacaattcc gccatatcgg caagcgttgc cccgattcgg tgcggcgttt
    34921 caaacatgac gacaggaaat gccgcccgca cccatttggc aaacaatttc ctacgttcgc
    34981 ccgatttcgg cggtacaaaa ccgttgaaat aaaaatcgga ttccgccaca ccggccacac
    35041 tcaacgccgc cattaccgcg cttgcgccca cgacgggaac gactttgaac cctgcttcgc
    35101 gcacgcggcg ggcgagtttc gcgcccgggt cgcacacggc cggcgtaccc gcatcggaaa
    35161 cctgcgccac aaccaggccg tctgaaagga aaccgattac cttgtccgcc atctgccgct
    35221 cgttgtgttc gcgcacactg accaacccgc cctgaatgcc gtacgcgctc aaaagctgcg
    35281 cagtaacgcg cgtgtcttcg gcacaaatga tgtccgcctt ttgcaatacc gccaaagcgc
    35341 gcagggtaat gtctgccaaa ttgccgatgg gcgtggcaac cacgtataat gtccctccga
    35401 cgacgctgtc ggaggctttc tgcaagtgtt tctgaaacat aaaaaatgcc gtctgaaaaa
    35461 cagacattat aaaggttaaa ccgattatgc gcttaaacca caaacagggt acggcagggg
    35521 aagatgccgc acttgccttc ctccaatccc aaggctgcac gctgcttgcc cgcaactggc
    35581 actgcgccta cggcgaaatc gacctgattg tcaaaaacgg cggcatgatt ctgtttgttg
    35641 aagtaaaata ccgcaaaaac caacggttcg gcggcgcggc atacagcatt tctccgtcca
    35701 aattattgaa actgcaacga agtgtagagt attatctgca acagaacagg ctgacaaacg
    35761 taccgtgccg cctcgatgcg gtacttatcg aaggaaaccg cccgcccgag tggataaaga
    35821 atattacagg ttgacgatat gacgacatta caagaacgcg ttgccgcaca ttttgccgaa
    35881 agcatccgtg ccaaacagga agccgaaaaa atactggtcg agccgaccgt acaggctgcc
    35941 gagctgatgc tgcaatgcct gatgaacgac ggcaaaatcc tggcctgcgg caacggcggt
    36001 tcggctgccg acgcgcaaca cttcgccgcc gaaatgaccg ggcgttttga gaaagaacgc
    36061 atggaactcg ccgccgtcgc cctgaccaca gacacctccg cgctgaccgc catcggcaac
    36121 gactacggtt tcgaccacgt attcagcaaa caagtgcgcg cgctcggacg tgcaggcgac
    36181 gtcctcgtcg gcatttccac ctccggcaat tccgccaacg tcatcgaagc cgtcaaagcc
    36241 gcgcacgaac gcgatatgca cgtcatcgcc ctgaccggcc gcgacggcgg caaaatcgcc
    36301 gccatgctca aagacaccga cgttctgctc aacgtccccc atccgcgcac cgcccgcatt
    36361 caggaaaacc acatcctgct gatacacgcc atatgcgact gtatcgactc cgtactgctg
    36421 gaaggaatgt aacccttttc agacggcatg gcgcaaagca atgccgtctg aaacgcccaa
    36481 gaaaggaagt ccccgatgaa acccaaacca cacaccgtcc gcaccctgat tgccgccgtc
    36541 ctcagccttg ccctcggcgg ctgcttcagc gcagtcgtcg gcggggccgc cgtcggcgcg
    36601 aaatccgtca tcgaccgccg aaccaccggc gcgcaaaccg atgacaacgt tatggcgttg
    36661 cgtatcgaaa ccaccgcccg ttcctacctg cgccaaaaca accaaaccaa aggctacacg
    36721 ccccaaatct ccgtcgtcgg ctacaaccgc cacctgctgc tgctcggaca agtcgccacc
    36781 gaaggcgaaa aacagttcgt cggtcagatt gcacgttccg aacaggccgc cgaaggcgta
    36841 tacaactaca ttaccgtcgc ctccctgccg cgcactgcgg gcgacatcgc cggcgacact
    36901 tggaacacgt ccaaagtccg cgccacgctg ctgggcatca gccccgctac acaggcgcgc
    36961 gtcaaaatca ttacctacgg caatgtaacc tacgttatgg gcatcctcac ccccgaagaa
    37021 caggcgcaga ttacccaaaa agtcagcacc accgtcggcg tacaaaaagt cattaccctc
    37081 taccaaaact acgtccaacg ctgactcggc aatgccgtct gaaccgcctt cagacggcat
    37141 tgcccgacac cccaaaagca caatcaaaat ggcaaaaaaa ccgaacaaac ccttcaggct
    37201 gacccccaaa ctcctgatac gcgccgtatt gctcatctgt atcaccgcca tcggcgcatt
    37261 ggcagtaggc atcgtcagca cattcaaccc gaacggcgac aaaaccctcc aaaccgaacc
    37321 gcaacacacc gacagccccc gcgaaaccga attctggctg ccaaacggcg ccgtcggaca
    37381 agatgccgcc caacccgaac accaccacgc cgcctcatcc gaacccgcac agccggacgg
    37441 cacagaagaa agcggcagcg gactgccgcc ccctgccgca cccaagaaaa accgggtcaa
    37501 accgcgccct tcggatgcgg cccgggcagc cgattcgtta accggcaccg gaacacaagc
    37561 tgaaaacaca ctcaaagaaa cccccgtact gcccacaaac gccccccatc ccgaaccccg
    37621 aaaagaaaca cccgaaaaac aggcgcagcc caaagaaaca cccaaagaaa aagaaacgcc
    37681 caaagaaaac cataccaaac cggacacccc gaaaaacacg ccggccaaac cccataaaga
    37741 gattctcgac aacctctttt gacccggcac ggcaggcaca cccgcaatcc aaggaagcat
    37801 tatgaacggc atcatcatca aaacccccga agaaatcgaa aaaatgcgcg agctgggcaa
    37861 actcgtcgcc gaagccctcg actacatcgg acaattcgtc aaacccggca tcaccaccga
    37921 cgaaatcgac aaacttgttt acgactacca cgtcaacgtc caaggcggct atcccgcccc
    37981 cctccactac ggcaacccgc cctaccccaa atcctgctgc acctccgtca accacgtcat
    38041 ctgccacggc attcccgacg acaagccgct caaagaaggt gacattatca acatcgacct
    38101 caccatcaaa aaagacggtt tccacggcga ctccagccgt atgtttaccg tcggcaaagt
    38161 ctcccccatc gcccaacgcc tgatcgacgt aacccacgcc tctatgatgg cgggcataga
    38221 agccgtcaaa cctggcgcga cgctgggcgg cgtaggttac gcctgccagc aggttgccga
    38281 aaatgcaggt tattcggttg tacaagaatt ctgcggacac ggcatcgggc gcggtttcca
    38341 cgaagccccg caagtgttgc actacggaaa aaaagggcag ggtcccgttc taaaaccggg
    38401 tatgattttt accgtcgaac cgatgatcaa ccaaggcaaa cgccacctgc gtatcctcaa
    38461 cgacggctgg acggtggtta ccaaagaccg ctccctctcc gcccaatggg aacacgaagt
    38521 cttggtaacc gaaaccggct acgaaatcct caccgtcagc cccgccaccg gcaaaccctg
    38581 aagctgtatg caatataaaa acaggcttga cccggcacat tacgaaaaca aagcaaatcg
    38641 gaatttgccc cgcaaccaga aaaacttaaa ggaagtttta tgaaaatatt tgaaaatata
    38701 gaagatgtta aagccatccg taaaaagacc gggatgaacc agatagactt ctggggcaag
    38761 gtcggcgtta ctcaatccgg aggttcacgc tacgaaaccg gccgcaagat gcccaaaccc
    38821 gtacgcgaac tgctccgcct cgtccatatc gaatgcctcg atttggcaaa agtcaacaaa
    38881 aaagatatgg aaatcgccgc cctgttgaaa aaacaccatc ccgacctgta tgccgaattg
    38941 tccaaacaga ccaaggccga aagaaaaaaa caaggttaaa ccgcaacctc cggatgcccg
    39001 gaggtttttc atttccgaaa aatgcaaaca atgccgtctg aaacaccgga caggccgccg
    39061 tatcccgcct gccgcccctg cctcaaaccg ccgaaccgcc cgaacctgcc tttttacaaa
    39121 ctttatccaa tttcctgttt atttcaggat acgccgacat tagactgtca aacagtccga
    39181 aacgggcaaa ctccacatct atccaaagga ataaaaatga aacttctgac cactgcaatc
    39241 ctgtcttccg caatcgcgct cagcagtatg gccgccgccg gcacggacaa ccccaccgtt
    39301 gccaaaaaaa ccgtcagcta cgtctgccag caaggtaaaa aagtcaaagt aacctacggc
    39361 ttcaacaaac agggtctgac cacatacgcc tccgccgtca tcaacggcaa acgtgtgcaa
    39421 atgcccatca atttggataa atccgacaat atggacacgt tctacggcaa agaaggcggt
    39481 tatgtgctga gcaccggcgc aatggacagc aaatcctacc gcaaacagcc tattatgatt
    39541 accgcacctg acaaccaaat cgtcttcaaa gactgttccc cacgttaatc aggcaacaaa
    39601 aaacagcgtt ttcatttctg aaaacgctgt tttttgaccg ttccattatt cgcaaaaggg
    39661 aaaaaacgat tacctgcccc gtgtatcaaa acctgccctg ccggatgaag ggcataaccg
    39721 gcagggacgg cgtcaacacc atatgggggt acggcttttc ttgaaagatt cggtttaaat
    39781 atccaacact ttcgcggtat aggcgataat ttcatccgcc ctttcagggt tttcgttcaa
    39841 cttgatgccg taacccggta ccagctcttt cagacgacct tcccaagacg gggcgcgctc
    39901 ggggaagcat tggtgcatca gccggatcat cagcggcaca gcggtcgatg cgcccggcga
    39961 cgctcccagc aatgcggcga gcgagccgtc ggcgtgggcg acaatctccg taccaaactg
    40021 cagcacgccg cctttttcgg agtctttttt aatgatttgg acgcgttgcc ctgcggtgat
    40081 gagttcccag tcgtcggggt ttgcctcggg gtagtattcc agcagggagg caaagcgttc
    40141 ttctttggtt ttacgcaatt cgcccagcag gtatttggtc agcggcatat tcgcccagcc
    40201 ggcgcgcagc ataggataga ggttgtccat atggatggac agcggcaaat ccataaacga
    40261 gccttgcttg aggaagttgg aacggaaacc tgcgtaagga ccgaacataa ggtgtcgttt
    40321 gccgtctacg ttgcgtgtgt cgaggtgcgg gacggacatc ggcggcgcgc cgacggaagc
    40381 ctgcccgtac actttggcgt tgtgttgttc ggcggtttcg gggttgctgt tgcggaagaa
    40441 caggccggac acgggtaagc cgccgtagcc tttgccttcg gggatgccgg atttttgcag
    40501 cagggtcagc gcgccgccgc ccgcgccgag gaagaggaag cgggtgcgga gggtgagctg
    40561 ccagtctggg ttgcgggtat cggcggtttt gagcacccac gcgccgtcgg attcgcgttt
    40621 gatgtcttcg acgtggcggt tgaactcggt ttttacgccc ttgccctgca aatatttcac
    40681 catctggcgc gtcagccgtc cgaaatcgac atccgtgcct tcggcggaat agttggcggc
    40741 gacgggttgg ttttcgtccc ggccgcgcat aatcagcgga gcccaatcgg aaattttgtt
    40801 ccgatcggtg gaaaattcca tattttcaaa aagtttctgc gttttaaaca catcatagcg
    40861 tttttgcagg taacggcagt ggtcttcgtt catcaccaaa gacatatgcg gcacggcatt
    40921 gatgaaggaa ttgtcttcca acttgccttc cgcgaccagc gtcgcccaaa actggcggct
    40981 gacatgaaac tgttcggcaa tattgagggc gcgcgccgga ttgatgacgc cgtccgcacc
    41041 cagcggcgca tagttcaatt cgcacagcgc ggaatgcccc gtgccggcgt tgttccacgc
    41101 gtttgacgat tccaacgcca catcttccaa gcgttcaatc agggtgattt cccaagacgg
    41161 ttcgagttct ttgagcaaaa cgcccaaagt cgcgctcata atgccgccgc ccaccaagac
    41221 aacgtctgtc gcttcagcca tggtttactc ctaaaaaaca ggcatcttct gcccttatgg
    41281 ttatttgccg tactacaaac gcctgaatcg caaaagcagg ggaaaccggc aatggtgtgt
    41341 gtccgagcac gctgtttcgg ggttggaatg cgttgcaagt atggcttccg acaccgcttc
    41401 aggggcttgt aatatgttat cgtgaatgta gtggatttta ctgggaaatg caaagttttt
    41461 ctgtcgcccg ccaagccggg gaactgcgaa acaaaaaata a
//
LOCUS       DAWXHA010000003        40746 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.003, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000003 DAWXHA010000000
VERSION     DAWXHA010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 40746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40746
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.003"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            25..1404
                     /gene="radA"
                     /locus_tag="AABD07_000116"
     CDS             25..1404
                     /gene="radA"
                     /locus_tag="AABD07_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HFB2354742.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESFAAPEPK
                     NARFQSWAADTSTVQSLSAVTAAEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRSQRLELHAEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLSVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIHGVSSLQEA
                     IDICRDSRE"
     gene            complement(1679..2158)
                     /locus_tag="AABD07_000117"
     CDS             complement(1679..2158)
                     /locus_tag="AABD07_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HFB2354743.1"
                     /translation="MKHILPLIAASALCISTASAHPADKPPTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRTAYTDTRALIVGSRISFDEVANTLANAEKLIQKTVGE"
     gene            complement(2283..2642)
                     /locus_tag="AABD07_000118"
     CDS             complement(2283..2642)
                     /locus_tag="AABD07_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFB2354744.1"
                     /translation="MNIKQLITAALIASAAFATQAAPQKPVSAAQTAQHSAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIYEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(2681..6283)
                     /gene="recB"
                     /locus_tag="AABD07_000119"
     CDS             complement(2681..6283)
                     /gene="recB"
                     /locus_tag="AABD07_000119"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HFB2354745.1"
                     /translation="MSAPIRAFDPLTAPISGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKSVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAELGDDTLSDGIAAYCAE
                     HHEGDTFLPALLEQALQKESRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLVPAQDFWRERVSGDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQADLKQAQRDAETSWQTVCRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHERLLKLSSDKLEAGLKKGKTPDAAVFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIEYLNSSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     PARAVAENWEIALIDEFQDTDPLQYEIFQKIFIARNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQLRWLHENDNEKANKDVLRRRAADYCADEIAHALNEASGGRLNFKGRPLQ
                     SGDIAVLVRTHNEAVMISAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDIWQKYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNGGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQGANRAELLAK
                     AQLSESEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRRTYACEKDGITMLKRNWRRVADNAPAGTDFAFTEDAPPPAAYRGNADQAAE
                     FAANSIPERGFRFVRHTSFTALSRQTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAEQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYGLSDIPPGCRRPEMGFTLHTEDFGLKRLRDWLARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICIIDYKSNHLSAYTRQAMDEAVAHQHYYL
                     QALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK"
     gene            complement(6360..7268)
                     /locus_tag="AABD07_000120"
     CDS             complement(6360..7268)
                     /locus_tag="AABD07_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HFB2354746.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALSA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFPEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDETIREVAI
                     IPEGLPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRSKETDDEFSRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
     gene            7556..8380
                     /locus_tag="AABD07_000121"
     CDS             7556..8380
                     /locus_tag="AABD07_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2354747.1"
                     /translation="MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERI
                     NNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMAG
                     LKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQ
                     SLTSNYGEKAKAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVK
                     IVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            8403..9086
                     /locus_tag="AABD07_000122"
     CDS             8403..9086
                     /locus_tag="AABD07_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFB2354748.1"
                     /translation="MTETRADMLISAFWPMVKAGFTVSLPLAIASFVIGMIIAVAVAL
                     VRIMPSGGIFQKCLLKLVEFYISVVRGTPLLVQLVIVFYGLPSVGIYINPIPAAIIGF
                     SLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEF
                     IGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLE
                     KRFDRYVAK"
     gene            9096..9851
                     /locus_tag="AABD07_000123"
     CDS             9096..9851
                     /locus_tag="AABD07_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFB2354749.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNARPLRIDFSKKTSKHDILALRRKSGMVFQQYNLFPHKTVL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLDAMKELAREGWTMVVVTHEIKFTLEVATNVVVMDG
                     GVIVEQGSPKELFDHLKHERTRRFLSQIQSAKI"
     gene            complement(9907..11289)
                     /locus_tag="AABD07_000124"
     CDS             complement(9907..11289)
                     /locus_tag="AABD07_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HFB2354750.1"
                     /translation="MASITRDIFKAYDIRGIVGKTLTDDAAYFIGRAIAAKAAEKGIA
                     RIALGRDGRLSGPELMEHIQRGLTDSGIGVLNVGMVTTPMLYFAAVNECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIVEKDGFVAADKQGSVTEKDISGAYHDHI
                     VGHVKLKRPINIAIDAGNGVGGAFAGKLYKGLGNEVTELFCEVDGNFPNHHPDPSKPE
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLNRNPGAK
                     VIFDVKSTRLLAPWIKEHGGEAIMEKTGHSFIKSAMKKTGALVAGEMSGHVFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLDNLPQSISTPELNISLPEGSNGHQVIEELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQAAIERIQNRFKAVI
                     ESNPHLIWPL"
     gene            complement(11457..11966)
                     /locus_tag="AABD07_000125"
     CDS             complement(11457..11966)
                     /locus_tag="AABD07_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFB2354751.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSAGAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIESVSTKRHGYHDDVPTEP
                     VIIIKAEAV"
     gene            complement(12086..13501)
                     /locus_tag="AABD07_000126"
     CDS             complement(12086..13501)
                     /locus_tag="AABD07_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13/DASS family transporter"
                     /protein_id="HFB2354752.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDREKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVKIKAESIPWTLHRVIALL
                     IFLATAAAWIFGSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIAASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            complement(13730..14092)
                     /locus_tag="AABD07_000127"
     CDS             complement(13730..14092)
                     /locus_tag="AABD07_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354753.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQILLLAKAFKTGKLPIPYRSLIAFAFCFAVGSECAQAWFTATRTGSLGDVLAD
                     LTGAALALFAARSACRPD"
     gene            complement(14089..14295)
                     /locus_tag="AABD07_000128"
     CDS             complement(14089..14295)
                     /locus_tag="AABD07_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HFB2354754.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            complement(14356..14934)
                     /gene="pth"
                     /locus_tag="AABD07_000129"
     CDS             complement(14356..14934)
                     /gene="pth"
                     /locus_tag="AABD07_000129"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HFB2354755.1"
                     /translation="MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHR
                     RQIDDAVAKSLQAVPDIISGKWEEATRFLHSK"
     gene            complement(14987..15265)
                     /locus_tag="AABD07_000130"
     CDS             complement(14987..15265)
                     /locus_tag="AABD07_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HFB2354756.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRTAALQSGLDGIFENLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            complement(15258..15689)
                     /locus_tag="AABD07_000131"
     CDS             complement(15258..15689)
                     /locus_tag="AABD07_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HFB2354757.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMRVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            complement(15911..17878)
                     /locus_tag="AABD07_000132"
     CDS             complement(15911..17878)
                     /locus_tag="AABD07_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HFB2354758.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIRQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALTALFYSLLPVLLLIGAWFYFMRMQAGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREKTEAPAPADTASTESGQQPENKA"
     gene            complement(17942..18562)
                     /locus_tag="AABD07_000133"
     CDS             complement(17942..18562)
                     /locus_tag="AABD07_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HFB2354759.1"
                     /translation="MAVRSKSSKAWLHEHINDHYVHMAQKDGYRARAAYKLLEINEKD
                     KIIKPGTVLADLGSAPGSWSQVAAKLTGTSGTVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            18672..18956
                     /gene="yhbY"
                     /locus_tag="AABD07_000134"
     CDS             18672..18956
                     /gene="yhbY"
                     /locus_tag="AABD07_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HFB2354760.1"
                     /translation="MADTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICNTLCEAVDAQPVRHIGKLLVLWRKNIEA"
     gene            19140..20141
                     /gene="hemB"
                     /locus_tag="AABD07_000135"
     CDS             19140..20141
                     /gene="hemB"
                     /locus_tag="AABD07_000135"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HFB2354761.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHMLTADDLIYPVFVLE
                     GAAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTGRAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGTQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(20205..21362)
                     /locus_tag="AABD07_000136"
     CDS             complement(20205..21362)
                     /locus_tag="AABD07_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HFB2354762.1"
                     /translation="MKFPTRAIHSGYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHNVKLVWLEMPSNPLLRLVDIKALAA
                     KAKAADALVGIDNTFATPYLQQPLDMGCDFAFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAIAGPTDCWLVLRGIKTLALRMEAHCKNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYALAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMTSSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIRVGLLRFSIGIEDVDDIWNDISAALDTTL"
     gene            21430..22338
                     /locus_tag="AABD07_000137"
     CDS             21430..22338
                     /locus_tag="AABD07_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HFB2354763.1"
                     /translation="MQPPKASDIISHLQAGGRQRFFRRHLPAIQYTHLNNYLNIKDKQ
                     RMNAIADVQSSRDLRNLPINQVGIKDLRFPITLKTAEGTQSTVARLTMTVYLPAEQKG
                     THMSRFVALMEQHTEVLDFAQLHRLTAEMVALLDSRAGKISVSFPFFRKKTAPVSGIR
                     SLLDYDVSLTGEMKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTSDA
                     EVGIEEVIDYVETQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKR
                     IKSFVVESENFESIHNHSAYAYIAYP"
     gene            22535..23199
                     /locus_tag="AABD07_000138"
                     /pseudo
     CDS             22535..23199
                     /locus_tag="AABD07_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
     gene            complement(23254..24012)
                     /locus_tag="AABD07_000139"
     CDS             complement(23254..24012)
                     /locus_tag="AABD07_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HFB2354764.1"
                     /translation="MNSKISSDHTEDTIRLSKRMAQLGLCSRREADGHIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NCWEGDTSRISFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGDKLRPAKVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(24037..24927)
                     /locus_tag="AABD07_000140"
     CDS             complement(24037..24927)
                     /locus_tag="AABD07_000140"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HFB2354765.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGV
                     RECCIYTQDTDGCHIVNKTELGQYCDLVAVLGGDGTFLSAAREITPRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERALALNDAVLSRGG
                     AGQMIEFEVFVNQEFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQSFIDVQNLDRIIIRRYHNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            complement(24947..25513)
                     /locus_tag="AABD07_000141"
     CDS             complement(24947..25513)
                     /locus_tag="AABD07_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HFB2354766.1"
                     /translation="MSALLPIINRLILQSPDSRSELTSFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAIRKILQGGEPGAGDIRLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQAGIGSRATDIGHGIKQIGRNIAEQIGGFSREPESANTGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            complement(25563..26339)
                     /locus_tag="AABD07_000142"
     CDS             complement(25563..26339)
                     /locus_tag="AABD07_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFB2354767.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYRHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLNRTDAFQTALWRHHADKPVWFFLLPPSFLAHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDKARECDETAAPDPQTESARQILAAEQHLLDNGVPNIDILRLGG
                     LYCAERHPVSRLVQKQNIQGGNRPVNIVHRDIAVENLFQTASNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPAPDFSPDDSVGKIIRTVCDNGLSL"
     gene            complement(26394..27044)
                     /locus_tag="AABD07_000143"
     CDS             complement(26394..27044)
                     /locus_tag="AABD07_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HFB2354768.1"
                     /translation="MPVTRIAKTNTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLAYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVKLLTQLNGLNVINADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGVRRTLSLLRPYLLPEHRAEYDRKIGNGNP"
     gene            complement(27056..28096)
                     /gene="murB"
                     /locus_tag="AABD07_000144"
     CDS             complement(27056..28096)
                     /gene="murB"
                     /locus_tag="AABD07_000144"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HFB2354769.1"
                     /translation="MQPIRYRTDLTPYNTFGLHAQARAFIALKHADELRDIVRLPEFD
                     RDTVLWLGGGSNILLMQDYDGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHT
                     VALGLSGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAKVAELSAGREATAKDVS
                     DAVSAIRNSKLPDPKVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDKQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPTSFSL"
     gene            complement(28140..29519)
                     /gene="norM"
                     /locus_tag="AABD07_000145"
     CDS             complement(28140..29519)
                     /gene="norM"
                     /locus_tag="AABD07_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HFB2354770.1"
                     /translation="MLLDLDRFSFSVFLKEIRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEAGETGRQGIW
                     FGLILGIFGMILMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGVATMAVFWFSALALW
                     IYIAKEKFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVSGWVL
                     AVITVLSLVLFRSPLASMYNDDPAVLSIASTVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAVALVWCLEKYSM
                     ELVKSHEAV"
     gene            29855..31006
                     /locus_tag="AABD07_000146"
     CDS             29855..31006
                     /locus_tag="AABD07_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HFB2354771.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQPDGLPNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSAALLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALDELQAVCDAFPDNEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAVERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            31111..32409
                     /locus_tag="AABD07_000147"
     CDS             31111..32409
                     /locus_tag="AABD07_000147"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HFB2354772.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHEGLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAVLAYYNVQLQYLHNAGPVKAEDVMAVIEKVAPRIAPMIADVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPGGGKTDILPCGSDAVETCKPIYETMPGWRESTVGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(32645..33484)
                     /gene="htpX"
                     /locus_tag="AABD07_000148"
     CDS             complement(32645..33484)
                     /gene="htpX"
                     /locus_tag="AABD07_000148"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HFB2354773.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGAGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            33699..34346
                     /gene="adk"
                     /locus_tag="AABD07_000149"
     CDS             33699..34346
                     /gene="adk"
                     /locus_tag="AABD07_000149"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HFB2354774.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVG
                     LDAVVEIDVSDSVIVDRMSGRRVHLASGRTYHVTYNPPKTEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQAVEAVKAEVLGALGK"
     gene            34870..35610
                     /gene="pyrF"
                     /locus_tag="AABD07_000150"
     CDS             34870..35610
                     /gene="pyrF"
                     /locus_tag="AABD07_000150"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HFB2354775.1"
                     /translation="MNPLITDFQTPQQRTPVIVALDFANEKDTLGFVRNLDPALCQIK
                     IGKELFTATGRSLAESLIHQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGRDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTRAADPVAVLREVNRVANLEAN"
     gene            35666..36628
                     /gene="hldA"
                     /locus_tag="AABD07_000151"
     CDS             35666..36628
                     /gene="hldA"
                     /locus_tag="AABD07_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HFB2354776.1"
                     /translation="MPAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGDDEAAAALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNREVLEQIKRKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHVGKTVLIDPKGDDYEKYVGATLITPNCAELKEVVGSWKNEGDL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELVEALDGQ"
     gene            36692..37696
                     /gene="rfaD"
                     /locus_tag="AABD07_000152"
     CDS             36692..37696
                     /gene="rfaD"
                     /locus_tag="AABD07_000152"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HFB2354777.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLTKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKINLYFFDHPELSGIYNLGTGRSQQFNELAAAAVNACRAAEGKSELSLKEL
                     VEEELIRYIPFPDALKGKYQGFTQADITKLREAGYKEEFFDVKAGVNRYVKWMLENLA
                     "
     gene            37774..39314
                     /locus_tag="AABD07_000153"
                     /pseudo
     CDS             37774..39314
                     /locus_tag="AABD07_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359896.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
     gene            39430..40281
                     /gene="dinD"
                     /locus_tag="AABD07_000154"
     CDS             39430..40281
                     /gene="dinD"
                     /locus_tag="AABD07_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HFB2354778.1"
                     /translation="MTTENNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAID
                     KAITACETSGNDKNHHFVETNKMIALGKGGQREVADYRLSRYACYLIVQNGDPSKSVI
                     AAGQTYFAVQARRQELQDEAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPV
                     EYAVFQNHGYRGLYGGLDKQGIHSRKGLKKSQRILDHMNASEPAANLFRATQTEEKLR
                     RKNIQGKTQANRVHFEVGQKVRQTIEELGGIMPENQPVPEKSIKQLENEEQKRLAATE
                     QHQNGKK"
     gene            40448..>40746
                     /locus_tag="AABD07_000155"
     CDS             40448..>40746
                     /locus_tag="AABD07_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFB2354779.1"
                     /translation="MDMQSKAKKLIEMIQTAPVEWKPLGEVLVRTKGTKITAGQMKEM
                     HKDNAPLKIFAGGKTFALVDFDDVPDKDIHREPSIIVKSRGIIEFEYYDKPFSHK"
BASE COUNT         9091 a        10480 c        11799 g         9376 t
ORIGIN      
        1 caaaaatccc atagggaaaa catcatggca aaaacgctta aaacccttta ccaatgcacc
       61 gaatgcggcg gcacttcccc gaaatggcag ggcaaatgtc cgcattgcgg cgagtggaac
      121 acgcttcagg aaagctttgc cgcgcccgag ccgaaaaacg cccgattcca atcttgggcg
      181 gcggacactt cgaccgtcca atccctctcc gccgttaccg ctgccgaagt gccgcgcaat
      241 ccgaccggta tgggcgaact cgaccgcgta ttgggcggcg gtttggtcga tggcgcggtc
      301 atcctgctcg gcggcgatcc cggcatcggc aaatccacgc tgttgttgca aaccatcgcc
      361 aaaatggcgc aaagccgcaa agtgctgtac gtttccggcg aagaatccgc ccaacaggtc
      421 gccctgcgct cgcaacgttt ggaactgcac gccgaaggcg taaacctgct tgccgaaatc
      481 cgcatggaag cgattcaggc ggccttgaaa cagcatcagc ccgaagtcgt cgttatcgat
      541 tccatccaaa ccatgtattc cgaccaaatc acgtccgccc ccggttccgt gtcgcaggtg
      601 cgcgaatgtg ccgcccaact gacgcgtatg gcgaaacaaa tgggtatcgc catgatactg
      661 gtcggacacg ttaccaaaga cggagcgatt gccggcccgc gcgtgctgga acatatggtc
      721 gataccgtgc tgtatttcga gggcgaccaa cattccaact accgcatgat acgcgccatc
      781 aaaaaccgtt tcggcgcggc aaacgaattg ggcgtgttcg cgatgaccga aaacggtttg
      841 aaaggcgtat ccaacccgtc cgccatcttc ctcgccagct accgcgacga cacgcccggt
      901 tcgtgcgttt tggttacaca ggaaggcagc cgcccgcttt tggtcgaaat tcaggcattg
      961 gtcgatgacg cgcacggctt cacacccaaa cgcctcagcg tcggattgga acaaaaccgc
     1021 cttgcgatgc tgcttgccgt gttaaaccgg cacggcggca tcgcctgttt cgatcaggat
     1081 gtttttttaa acgccgtcgg cggcgtgaaa atcggcgaac cggcggcgga tttggcggtc
     1141 atcctcgcga tgctttccag cttccgcaac cgccctatgc ctgaaaaaac cgtggtcttc
     1201 ggtgaaatcg gcctaagcgg cgaagtccgc cccgtcgcac gcggacaaga gcggctcaaa
     1261 gaagcggaaa agctcggctt caaacgcgcc atcgtcccca aagccaatat gccgcgcaat
     1321 gccaaagagt ttccgaacct gaaaatccac ggcgtttcaa gtttgcagga agccatcgat
     1381 atttgccgcg acagcaggga ataaacggaa atgccgtctg aaatcaggtt tcagacggca
     1441 tttggtttgt ggcggattga aacaagaagg cataccggcg acagataaga tttgcggcaa
     1501 agttgcctgt gatatggcaa aacgcatacg cccgtcatcc ctgcgaaggc gggaatccgg
     1561 aatcgtccgt ttcggcaatg attggaaatc acggtaaccc aaccgcttgg attcccgact
     1621 tcgggggaat gaggggcgtg tgcatttgat ttccatccgc catatgtcgg cgacgggctt
     1681 attcgcctac ggttttttgt atcagttttt cggcgtttgc caaagtgttt gccacttcgt
     1741 cgaaactgat gcggctgccg acgatgaggg cgcgcgtatc ggtataggcg gtgcgtactt
     1801 tgccgtccgt ttcggtaacg aggacgcgca ggggcagttg cagggcgaag gcggggtctt
     1861 tgaccatcag cggcgtaccg gccttgggcg tgccgaagac gatgactttt gccggctgca
     1921 tggtcaggcc gtttcggcgt gccgcttcct gatggtcgat gacggcaaaa atgtccatcc
     1981 ctttgctttt tatggcggtt tcaaggcggc tgacggtttc gtcaaaactg tatttcgagg
     2041 tgagggtgtg cgtggtcata gcggtttcgt tttgggtggg cggtttgtcg gcagggtgtg
     2101 ccgaagcggt tgaaatgcag agtgcggatg cggcgatcag ggggagtatg tgtttcatcg
     2161 tatttcctta tcggtttgtt tatcgggctt cggacggggc ggcacgcgcc gcgcctgatg
     2221 ccgtgccgcg tgccggaacg ccgtatgccg tctgaaagcc tgtcctttca gacggcattg
     2281 cgtcatttca tccctttttt gagcaggtct tcataaccgc cgtgattggc aacatttgta
     2341 taacctgctt ttttcagctc ttgaagggcg gcttcggcac gccgtccgct gcggcagtag
     2401 aggttgaccg gcgtgtcttt gtcgggcgcg gcttcgtata tgcggcggac gatttggtcg
     2461 acggggatgt tgaccgcgtt gtgcaaatga ccttcgctaa attcctgttc ggaacggaca
     2521 tcgatccaaa cggctgaatg ttgcgcggtt tgggcggcgg atacgggttt ttgcggggct
     2581 gcctgcgtgg caaaggcggc tgaggcaatg agtgcggcgg taatcaattg tttgatattc
     2641 atagggttct cctgcggttg tcgtcttaag ggacgggaag ttattttatc tgttccaaag
     2701 cggcggcatc tatgtcccaa cgccaaacgc cgccgccttt gccatccaat ccgcgcaaaa
     2761 acaggtagcg gacggaaacg gcggcgggcg gttgtccgcg cagtttgaag tagcgcgcgg
     2821 cggcaacggc gtaaatcagt gcctgaaggt aatagtgctg gtgcgcgacg gcttcgtcca
     2881 tcgcctgccg cgtgtaggcg gataggtggt tggatttgta gtcgatgatg cagatattgc
     2941 cgtcggggtc ttggcagacc atatcgataa agccgtttaa aaagccgttg acggtgtgga
     3001 agtcgagcgt ctcggcggcg gcacggcaga cttcgggcag cctgatgtcg tcgcgggcaa
     3061 gccagtcgcg cagccgtttg aggccgaagt cttcggtgtg gagggtaaag cccatttcgg
     3121 gacggcggca cccgggcggg atgtcggaca ggccgtatgc cccagtcagc ggcgttttgc
     3181 ggcaggcttc cgccatttcg gcaacggcgg gcagccatat ttcttcaaaa ccgtattttt
     3241 tcagcttgtc ggcaatgagg gtttcctgtt cggcggctgc ttgtccgaat ttgaaatctt
     3301 caagaatttc gtgcaggcac agccccgcct gcgtgccttt cggaaagtcg tgtatcgata
     3361 tgccgtctga agccgtcggc gtttcagacg gcatcgccgg caccgaggtt tcggcggcat
     3421 ccaaggacgg gcaggcatct tcttcgccgc cgtcgggcgt ttgggtttgg cggcttaagg
     3481 cggtgaagct ggtgtggcgg acaaatcgga atccgcgttc gggaatgctg tttgcggcaa
     3541 attcggcggc ttgatcggcg ttgccgcgat aggcggcagg gggcggcgca tcttctgtga
     3601 aggcgaaatc cgtgccggcc ggggcattgt ccgccacgcg ccgccagttg cgtttgagca
     3661 tcgttatgcc gtctttttca cacgcatagg tacggcggac ggtttcgcgg ctgtcttgcg
     3721 gcaagccttc gatcaggtag gcaagggggt tgtcggcggt atcggaagaa taggcggcgt
     3781 agatgttgag ctgttcctcg gcacgcgtca gcgcgacata aagcaggcgc aggcgttccg
     3841 ccatttcttc gtcggcgtat tgcttctgtt cgctttccga cagttgcgcc tttgccaaaa
     3901 gttcggcccg gtttgcgcct tggtggagga tttgccagtc ggacggtccg gtatcttgcg
     3961 cgtcccacgc aaacgggcag tacaccagcg gatactgcaa acctttcgag gcgtgcatgg
     4021 taacgatttt gaccaaatct tcgtcgcttt ccaaacggat ggcgcggttg tcgccgccgt
     4081 tgttgccggc caggctgatt tgatcgcgca gccatttgtg cagtgcggcg gggttgcggt
     4141 tttgcgcgtc ttcggcggca agcagttcga gcagttggaa ataattggtc aggctgcgcc
     4201 cgttgttccg gcttaagagg cgcgtttcga tgccgtgtgt ttgggaaaac tgctgcatag
     4261 cggcgaaaat gccgtatttt tgccatatgt cgagcgcggt tcgggcagat tccgcccaat
     4321 gcaaaatctc gctttcgttt tggttgaagt cgtgcaattg ctgcgcgtca taaccgaata
     4381 tgccgcttgt caggacaaag cgcagcgttc cggcgcggcg cggttcgagc cagaagccga
     4441 tgagcgcgga cagggcggcg gcttcgggcg aggcgaacac ggattcgcgc gaaagcagga
     4501 cgctttgcac ctgccgtttt ttcagtgcgg cggaaatcat caccgcctcg ttgtgcgtgc
     4561 gtaccagaac ggcaatatcg cccgactgca acgggcggcc tttgaaattc agacggcctc
     4621 cggaggcttc gttgagcgcg tgggcgattt cgtcggcgca atagtcggcg gcacggcggc
     4681 gcaaaacgtc tttgttggct ttttcattgt cgttttcgtg cagccaacgg agctgtacgg
     4741 caggacgttt gggcgacaac ctgctttcgg cacgcgccgc accgacttcc gaatagccga
     4801 tgttttccaa aacgaacggg cgttctttga ggcggaacag cgcgccgatg ctgccgataa
     4861 gcgcggcgtg gctgcggtag ttggtggcga gcgtgtagcg gtgccgcgcg tcttccgccg
     4921 cctgaaggta ggcgtaaatg tccgcaccgc gaaagctgta aatcgcctgt ttggggtcgc
     4981 cgacgaggaa cagcgggcgg tttcgggcga tgaaaatctt ttggaagatt tcgtattgca
     5041 gcgggtcggt gtcttggaac tcgtcgatca gcgcgatttc ccagttttcg gcaacggcgc
     5101 gggcgggggt ttcggcgtgc ggattgtcgg tcagcgcggt gtggacatcg agcagcaggt
     5161 cgtcgaaacc gcgttcgcgg cgcgattttt tcatttcggc aaggctgctg ttgagatatt
     5221 cgattaaatc cagttgcagc cggatcattg ttgcttcttc cgcttcttcg agtgcgttca
     5281 aatcgcgccc gaagtctgcc agtttctgca attcggcaaa tactgccgca tcgggcgttt
     5341 tgcctttttt cagtccggct tcgagtttgt cggatgagag tttcaagagc cgttcgtgcg
     5401 tgtctttgtc cagaaagggc agttgtccgg cggcggattt ttgtgccagt tctttaaaaa
     5461 ggttgccgaa gctgtttttg cggtaactgt tgccgttgag gtcgggatgg atgcgccaaa
     5521 agccggcttc cagctcgggc agcaggcggc agacggtttg ccatgaggtt tcggcgtcgc
     5581 gctgcgcctg tttcaaatcc gcctgcggac ggcggaaatt caggtacggg cgggacaggt
     5641 aggcgcggat ttgggcaagg acggtttgcg gcacagcttt gcgtttaaac gccaatgcgg
     5701 caagcaccgg gtcgccgctg acgcgttccc gccaaaaatc ttgagccggg acaagcaggc
     5761 ggtcgccgtc ttcttcggtc agttcgacat cgaacggtgc ttggcacagg aaggcgtagt
     5821 cgcgcaggat gcgctggcag aagccgtgga tggtgtagat ggcggcgttg tcgaattgcc
     5881 cgatggcggc cttgaggcgg acaatcagac gcgtccggct ttctttttgc aaagcctgtt
     5941 ccaagagtgc gggcaggaag gtgtcgcctt cgtggtgttc ggcgcagtag gcggcaatgc
     6001 cgtctgaaag cgtgtcgtct ccaagttcgg caatttcttt gctttccaaa acctgcaaca
     6061 catcgtccaa acgcgcgcgc aggcgtgttt tcagctcggc agtggcggct ttggtgaagg
     6121 taacgaccaa tacgcgctcg acgctttttt gttccaatac gatcaggcgc gtaaacaggg
     6181 cggcaatgcc gtaggttttg ccggtgccgg cagaggcctc aatcaggttg gtgccggaaa
     6241 tgggggcggt cagcgggtcg aatgctcgga tgggtgcgga catagcgtgt atgaaaacgg
     6301 ttggacggta aaacgggaaa atgccgtctg aaaaagggtt tcagacggca tcgtccggct
     6361 tagaggtttt gcaggcgttc gacagacggc gcgtagtagt atccgcccga aacggcggcg
     6421 gagaggtgtc ggagcagcag gtcggttttg ccgtccgtgt cgccgaacat actcaataat
     6481 tgcgcttcga tattatgcag cgtgcggcag tatgcggtaa acatcaaacc gtgttcgccg
     6541 ctgattttgc cgaagggcag gctgcggcgg acgattttca ggccgactcc gttttctttc
     6601 aggttgacgc ggccgaggtg cgaatcgggc aggcggacat cgcggctgaa ttcgtcgtcg
     6661 gtttccttgc tgcgtccgac cgaggcctcc tgttcggcga cggggacggc atcccatttt
     6721 ttcaaatcgt gcaggtattt ttgcagcagg acatagctgc cgcctgcatc gggcagccct
     6781 tcggggatga tggcgacttc gcggattgtt tcatcgcctt gcgggttttc cgtgccgtcg
     6841 acgaaaccgt ccagcccgcg atcctgatac aggcgcaaac cgtgttcttc ggacgcgacg
     6901 catatgctgt cgccgaacgc gcccaaaacg gattgggcaa gcgcgtaggc tgcgttttgg
     6961 cggaaggatt ggatgtggat ggacatatcg tgctgcgtgg acggcgcaag cccgttgccc
     7021 atttcgggga agggtttgat ttcactgcct tcgtccgtgt gtccgaatgt tgcccaagct
     7081 ttgctgccga aggcgatggt cagacccaaa atatcgtccg gaaagcgggc tttcaaggcg
     7141 gataacgcgt cgagcgaagc gcggcaggcg gctttaatat cgttgaggcg gttggcggcg
     7201 aagtcggctt cgataaagat gccggcttgg gcgtggtcgg gaatgatggc ggattggggc
     7261 gtgttcatga gatgttcctt tttggtgtca tctgtttcgg gtggattata gcaccgaatc
     7321 ggcaggcgga tttttgccgg aacggcgtgc gtgaatccgc cgtttgcata cctgatgccg
     7381 cttttcggtt tcgtgccgcc cgccgccttt cccgccccct ttatttccgc ttccggcggc
     7441 ttcggcatat ctttcccatt ccgatttgga ataaccatat aaaaaaagta ttctttgtgt
     7501 ttgccgcaat ttcacttaga atgccgcact tgcacacttt ttacaggagg gaatgatgtt
     7561 gaaaaaattc gtactcggcg gcattgccgc attggttttg gcggcctgcg gcggttcgga
     7621 aggcggcagc ggagcatctt ccgcgcctgc acaatcggca atttccggtt ctttaatcga
     7681 gcgcatcaac aataaaggca cggttaccgt cggcacggaa ggcacttacg caccgtttac
     7741 ctaccacgac aaagacggca aactgaccgg ttacgacgtg gaagtaaccc gcgccgtggc
     7801 ggaaaaactg ggcgtaaaag tcgagtttaa agaaacgcaa tgggattcga tgatggcggg
     7861 tttgaaagcc ggacgtttcg acgtggtggc aaaccaagtc ggcctgacca gccccgaacg
     7921 ccaggcgaca tttgacaaat ccgaacctta cagctggagc ggtgcggttt tggttgcgcg
     7981 taacgacagc aacattaaat ccatagccga catcaaaggc gtgaaaaccg cgcaatccct
     8041 gaccagcaac tacggcgaaa aagccaaagc cgcaggtgcg caactcgtgc cggtggacgg
     8101 tttggcgcaa tcgctgaccc tgattgaaca aaaacgcgcc gatgcgacgt tgaacgatga
     8161 attggcggtt ttggactatc tgaagaaaaa cccgaatgcg ggggtgaaaa tcgtgtggtc
     8221 cgcgcctgcc gatgaaaaag tcggttccgg tctgattgtc aacaagggca atgacgaggc
     8281 cgtggcgaaa ttcagcacgg caatcaacga gctgaaagcc gacggcacgt tgaaaaaact
     8341 gggcgaacaa ttcttcggaa aagacatcag tgttcaataa tttccttgcc tctctgccgt
     8401 ttatgacgga aacacgcgct gatatgctca tcagcgcgtt ttggcccatg gttaaagccg
     8461 gctttacagt gtctttgcct ttggcgatcg cttctttcgt tatcggcatg attattgccg
     8521 tagccgttgc tttggtaaga atcatgcctt ccggcggtat tttccaaaaa tgcttgttga
     8581 agctggtgga attttatatt tccgtcgttc gcggtacgcc gctgttggtt cagcttgtga
     8641 ttgtgtttta cgggctgccg tccgtcggca tctatatcaa tccgattccc gccgccatca
     8701 tcggcttttc gctcaatgtc ggcgcatacg cttccgaaac catacgcgcg gcgattttgt
     8761 ccgtgccgaa agggcagtgg gaagcaggtt tctccatcgg tatgacctat atgcagacgt
     8821 tccgccgcat cgtcgcaccg caggcattcc gcgtcgccgt tccgccgttg agcaacgagt
     8881 ttatcggctt gttcaaaaac acctcgcttg ccgccgtggt aacggtaacg gagcttttcc
     8941 gtgtcgcaca ggaaacggca aaccgcactt atgacttttt gcctgtctat atcgaagctg
     9001 cattggttta ttggtgtttc tgtaaagtgc tgtttttgat tcaggcgcgt ttggaaaaac
     9061 gtttcgaccg ttatgtcgcc aaataaggag ttgtcatgat taaaatccgc aatatccata
     9121 agacctttgg cgaaaacacc attttgcgcg gcatcgattt ggatgtgggc aaagggcagg
     9181 tggtcgtcat cctcgggcct tccggctcgg gtaaaacaac atttctgcgc tgcctaaacg
     9241 cgttggaaat gcccgaagac ggacaaatcg agttcgacaa cgcgcggccg ttacgcattg
     9301 atttttccaa aaaaacaagc aaacacgata ttttggcact gcgccgcaag tccggaatgg
     9361 tattccaaca atacaacctc ttcccgcata aaaccgtgtt ggaaaacgtg atggaagggc
     9421 cggttgccgt acagggcaag cctgccgccc aagcgcgcga agaggctttg aaactgctgg
     9481 aaaaagtcgg cttgggcgat aaagtggatt tgtatcccta ccagctttcc ggcggtcagc
     9541 agcagcgtgt cggtatcgcc cgcgcactgg cgattcagcc tgaattgatg ctgtttgacg
     9601 aacccacttc cgcgctggac cccgagttgg tgcaagacgt gttggacgcc atgaaggaat
     9661 tggcgcggga aggttggacg atggtcgtcg ttacccacga aatcaagttc acgctggaag
     9721 ttgccacgaa cgtcgtcgtg atggacggcg gcgttatcgt agagcagggc agcccgaaag
     9781 agttgttcga ccacctcaaa cacgaacgga cgcggagatt tttaagccaa atccaatctg
     9841 ccaagatttg attggctact tgtgaaaaat gccgtctgaa agtttcagac ggcatttttt
     9901 ctatttttac agaggccaga ttaaatgcgg attgctttcg atgacggctt tgaatcggtt
     9961 ttgaatgcgc tcgatggctg cttgcgtatc cgcttcaaaa cgcaacacca aaatcggcgt
    10021 ggtattggaa gcacgcatca gaccgaagcc gtcgggaaat tcaacgcgca ggccgtcgat
    10081 ggtgatgatt tcggttgcgc cttcaaattc ggctttggcg gcgagttctt cgataacttg
    10141 atgcccgttg ctgccttcgg gcagggagat gttgagttcg ggcgtggaaa tgctttgcgg
    10201 caggttgtcc aacacttcgg acggattgtc ggaggcggac aggatttcca agaggcgtgc
    10261 gccggcatac aggccgtcgt cgaagccgaa ccagcgttct ttaaagaaaa cgtgtccgct
    10321 catttcgccg gcaaccagtg caccggtttt tttcatagcg gatttgatga agctgtggcc
    10381 ggttttttcc attatggctt ctccgccgtg ttctttaatc cacggggcaa gcaggcgtgt
    10441 ggatttgaca tcgaaaatga ctttcgcgcc gggattgcgg ttcaaaacgt cttgggcgaa
    10501 cagcatcagt tggcggtcgg gataaataat gttgccgtct ttggtaacca cgcccaagcg
    10561 gtcggcatcg ccgtcaaacg ccaagccgat ttcggcatcg ccgtttttca gcgcggcaat
    10621 caaatcttgc aggttttccg gtttggaagg atcagggtgg tgattaggga aattgccgtc
    10681 cacttcgcag aaaagttcgg tcacttcgtt gcccaaacct ttgtagagtt tgccggcaaa
    10741 cgcgccgccc acgccgttgc ccgcgtcgat ggcgatgttt atcgggcgtt tgagtttgac
    10801 gtgtccgacg atgtggtcgt ggtatgcgcc ggagatgtct ttttcggtta cgctgccttg
    10861 tttgtcggcg gcaacaaaac cgtctttctc aacaatagct aaaagttctt gaatggcttc
    10921 gcctgcgagc gtgtcgccgc cgagcatcat tttgaaaccg ttgtaatcgg gcggattgtg
    10981 gctgccggta atcatcactc cgctgccgcc gcattcgttg acggctgcga agtagagcat
    11041 aggagtggta accatgccga cattgagtac gccgataccg ctgtcggtca ggccgcgttg
    11101 gatgtgctcc atcagttcgg ggccgctcaa gcgtccgtcg cgtccgagcg cgatgcgggc
    11161 gatacctttt tcggcggctt tggcggcgat ggccctgccg atgaaataag cggcatcgtc
    11221 ggtcagggtt ttgccgacga tgccacggat gtcgtaggct ttgaagatgt cgcgggtgat
    11281 gcttgccata aggtttcctt tgtgtccgtt taggaaaaac gggcgtattt taacatagcg
    11341 gtatgccgtc tgaaggcttg cgtccggttt tcagacggca tagcccggtt acatcaaata
    11401 acatgccgtc tgaaataaaa gcagcctttt atgcaggctg ctttcggatt gccggtttat
    11461 actgcttcgg ctttaatgat gatgacaggt tcggtcggca catcgtcgtg gtagccgtgg
    11521 cgtttggtgg atacgctttc gatggcatcg acaacgtcaa aaccgtcaac gactttaccg
    11581 aatacggcat agccccagtc ttggacgacg gttttgccgt acagctcttt agaacggaag
    11641 tttaggaaag cgttgtcggc agtgttaatg aagaattgcg cgccggcgga atgggggtcg
    11701 gaagtgcgcg ccatggcgat ggtgtattta tcgttgggca ggccgttgga cgcttcgttt
    11761 tgaatcggat cgcgggtttc tttttcgttc atgttttcat ccatgccgcc gccttgaatc
    11821 atgaagcctt tgatgacgcg gtggaagatt acgccgtcgt agaagccgtc tttgacgtat
    11881 tgctcgaagt ttttggcggt aacaggggct ttgtcgaaat cgagttcgat tttgatgtcg
    11941 cctttgttgg tgtgcaggat aatcatgggt tttcctttcg ttagaatccg gttttgaatt
    12001 attcgacaaa ttgtgtctga acgacaaact tcaaggtcgt ctgaaaaata ttctttcaga
    12061 cggtcttgtt gtttaggtcg atggtttaca tcagtacagc ataagcccac agagcaacca
    12121 atactacgca taggatgttc agcagtatgc cgacattcat catttctcgt tgtttgatta
    12181 agcccgtgcc gaacacaatc gcgttaggcg gcgtggcaac cggcagcatg aaggcgcaag
    12241 atgcggcgat gccgatgacg aataccaaga cttgttcggg cagccccatc tgcatagcga
    12301 tgccggagaa aatcggtaca agcagggcgg cggaggcggt gttgctggtg aactcggtca
    12361 gaaaaataat gaaggcggcg acgatgagta tcactaaaaa tgcgggcgcg ccggaaaagg
    12421 tggcggcaac ctgctgtccc aaggcttcgg acgcgccgga tgttttcaac agcgtgctca
    12481 ggctgatgcc gccgccgaag agcatcaaca cgccccagtc ggtattgcgg gcgacttcct
    12541 tccattgcgc cacgccgaag acgacgacgg cgacggcggc actcagggcg ataacggtgt
    12601 cgggattgga aatgccgaag gcggttttga ttttggagcc gaatatccac gcggcggctg
    12661 tggcaaggaa aatcaacagc gcgatcacgc ggtgcagcgt ccaagggatg gattcggctt
    12721 tgattttcac gcgttcgttc aaattaggtt tgaggatgac gtacagggag agcagcatca
    12781 agggcagaat caacagcatc atcggcaggc cgagcttcat ccagccgacg aagtccagat
    12841 ttagggcttt ggcggcaatc aggttgggcg gcgagccgac gagcgtgccc aagccgccga
    12901 tgctggcgca ataggcgatg ccgagcagga ggaagacgta ggttttgtgt tctttttccc
    12961 ggtcgaggtg gctcagcata cccattgcta gaggcagcat catcgcggcg gtggcggtgt
    13021 tgctgatcca catggacaga aaggcagtaa cgaggaacaa catcaaaacc gccactttca
    13081 tattgccgcg cgacaggcgc aacaggctga cggcgatttt acggtccagc cgctgcatat
    13141 gcagggcggt ggcaagcgcg aagccgccga aaaaaatgta gataatcggg ttggaaaaat
    13201 cagccatcgc ctttttgatg tccatgtcgg ggaaaccgag tacgacggcg agaatcggca
    13261 ccatcagtgc ggttacggta atgtggacgg cttcggtaaa ccaaagtgcg gcaacgaaaa
    13321 tcagcagcgc gataccttta ttggcatcgg ggctgtaagg caggatgtgg taaatgccga
    13381 aacagacgac ggcggaaata atggtggtca gcaaaccctt aaagtcggta atcggcttct
    13441 gcgcactgag cagctcgacg ttttcgggat gctgggtttt gtcctttgca tgcaggttca
    13501 tgaatgctcc tttaaggcaa caaaatcggt ttttcttttg tgtcgtgcaa tccgaaacgg
    13561 tctgcgaaac cgtcggttct gcaaccgctt cgagtatatt tgtaattcgg tgtagtgtaa
    13621 atatattgta aacgatttgt cggttttgtt tatgagatgg gattgatatg taaggggaaa
    13681 aacaggatgc atcaggggga ttcatcctgt ttgggagaaa taaaccgatt tagtccgggc
    13741 ggcaggcaga acgcgcggca aagagggcaa gggctgcgcc cgtcaggtcg gcaaggacat
    13801 cgcccaaact gccggttcgc gttgcagtaa accatgcctg cgcgcattcg ctgccgacgg
    13861 caaaacagaa ggcgaacgca atcaggctgc ggtaggggat gggaagtttt ccggttttga
    13921 atgctttggc cagaagcaag atttgtgcga aaaacagggc aaggtgtgct gctttgtcga
    13981 aatgtggaaa cggcggcggc gcggtgtcgg cagctttgaa gagcagcgaa tagatgccgc
    14041 cggcaaacca caatgcggaa agcaggctga agcggttgcg cggcagcttc atgccgcctc
    14101 ctcgtccagc cacgtttggc agattttgga caggcgcagg aatttgccgc cgcgtgcggc
    14161 aagtatgtcg cgccattgtg ccacttcttc ggcggacggt gcgtcgtcga tgctgcattc
    14221 gtacagcagg aaatcgaggg tttcttcgat gacggggatg gattcggttt ggataagctg
    14281 cttgagttcg gtcatgactg ttcggatacg gaaatcggga aaatgccgtc tgaaagggct
    14341 tcagacggca tcgggtcatt tgctgtgcag gaagcgcgtt gcctcttccc atttgccgga
    14401 aatgatgtcg ggtacggcct gcagggattt ggcgacggca tcgtcgattt gccggcggtg
    14461 ttccgcgctc ggtttgttca agacgtagcc gacgacgagg ttgcggtcgc cggggtggcc
    14521 gatgccgagg cgcaggcggt aatagtctgc cgtgccgagt tttgcctgaa tgtctttcaa
    14581 gccgttgtgt ccgccgttgc cgccgccgag tttgaatttg atccgtccgc aagggatgtc
    14641 gagttcgtcg tggacgacga ggatttcttc gggtttgatt ttgtagaact gtgcaagcgc
    14701 ggcaaccgcc tgtccggaac ggttcatgaa cgtggccggt ttgagcagcc aaacatcgcc
    14761 gtcgggcagg gcggcgcggg caacttcgcc gaagaatttt ttttcttctt taaacgaagc
    14821 cttccatttc cacgccagtt cgtcgaggaa ccaaaagccc gcattgtggc gggtctgttc
    14881 gtattctttg cccgggttgc ccaagccgac aaccattttg attgtgtttg acatgatatt
    14941 ttccgtgttt ctgtcgaatg ccgtctgaag gcttcagacg gcatggttat tcttcttgat
    15001 tttgaacgcg tttgcggcgc gcttctttgg ggtcgatcaa cagcgggcgg tacacttcga
    15061 tgcggtcgcc gtcgcgcagc ggcgtgtcgt ctttgacggc tttgccgaaa atgcccaaag
    15121 gcgcggaatg caggtttaaa ttttcaaata tgccgtccaa accgctttgc agtgcggcgg
    15181 tgcggacggt tgttccctcg gcaagctgca tggttttcaa aacctgtcgg tcgggcagac
    15241 cgtacacaat ctcaatttca agcataacgg cggtctgcct ctttgacgaa cgcttcgacc
    15301 agcgtggcgg aaaggtggtt gaagacgggg gaaattaagg cggacaaaac ggcattggaa
    15361 aaatcgtatt ccaaattgaa ttcgattttg cacatatcgt cgcccaaatc gataaatttc
    15421 cacgttccac gtaaggtttt gaacgggcct tcgagcagtt ccatacggat ttccctgccg
    15481 gggatgttgc ggttgtgcgt ggcaaacgat tggcgaacgc gcatataatc cataaacagc
    15541 cgcgccttca gttcgttgcc gctacgcccg atgacctcgg tcttgctgta ccacggcaga
    15601 aagtgcgggt aatcctcaac cttgtcgacc agctcgaaca ttttgtccgc gccgtgcagc
    15661 accaagatgt ttttttcaac ttttttcacg ggcatcacca atgcgggcgt gtattcgaag
    15721 ggcggtatta tagcggttta attttaaacc ggtacagcct tgccccgttc tgatttcaat
    15781 ttaaaccgcc atatcgcaga ttcgcaaaaa ccgatacggc tttggcgttt cagacggcat
    15841 tgagcggaaa atgccgtctg aaaacgggat gggaaaacgg cagcttgcgg gctgccgttt
    15901 gttcgggaag ttaagccttg ttttcaggct gctgcccgga ctctgtcgag gcggtgtctg
    15961 ccggggcagg tgcttcggtt ttttcccgag tcggagcgtg cggcgcgtta tcttccgccg
    16021 cgtccgcatt ctcgcgcagg ttgtggctgt aatccttggg cgggctgggt tgtttgcccg
    16081 ccataatttc cagtacctga tcgcggtcta tggtttccca ttccatcagg gctttgcaca
    16141 tcgtttccat cttgtcgcgg ttttcatcga ggattttgta ggcaacctga tactgctcgt
    16201 ccaaaatccg gcggatttcc gcgtcgatgt cctgctgggt tttctcggaa atgttttgcg
    16261 aacgggttac gctgcgcccc aagaagactt cgccttcgtt ttccgcataa accatcacgc
    16321 ccattttgtc gctcatgccg tagcgcgtta ccatttcgcg tgccatttgg gttgcgcgtt
    16381 caaagtcgtt tgatgcaccg gtggagatgc gtccgacgaa gatgtcttcg gcaatccgtc
    16441 cgccgaacag gatggagagc tggctcaaca tctgatcttt atacatactg atgcggtcgc
    16501 gctccggaag ctgccaagtc agacccagcg cacgtccgcg cggcataatg gttactttgt
    16561 ggacggggtc ggtaaagggc aggctttcgg caacaatcgc gtgtccggac tcatgatacg
    16621 ccgtcgcacg tttttcgtct tcgtgcatca ccatactgcg gcgttccgga cccatataga
    16681 ttttgtcttt ggcgtcttca aaatcgcttt gatcgacttt gactttgttg cggcggccgg
    16741 caaacagggc ggcttcgttg accaggttcg ccaaatccgc gccggaaaaa ccgggcgtgc
    16801 cgcgcgcgag ggacaataaa tccacagatt cgtccaaagg cactttttta gaatggacgt
    16861 tcaaaatctg ttcgcgcccc cggatgtccg gcagggggac gacgacttgg cggtcgaagc
    16921 ggccggggcg ttgcagcgca ggatcgagta cgtcggggcg gttggttgcc gcaatcacaa
    16981 ttacagtctg attgctctca aaaccgtcca tttcaaccaa taattggttt aatgtttgct
    17041 cgcgctcatc attgccgccg cccaaacctg cgccgcgttg gcggcctacc gcgtcaatct
    17101 cgtcgataaa gataatgcat ggggcgtttt tctttgcctg ctcgaacata tcgcggacgc
    17161 ggcttgcacc gacaccgacg aacatttcga caaaatcgga accggaaatg ctgaagaacg
    17221 gcacgccggc ctcgcctgca atggctttcg ccaagagtgt tttaccggtt cccgggctgc
    17281 ccgccagcag gatgccgcgc ggaacacgac cgccgaggct ttgatagcgg ttcggtgctt
    17341 tgaggtaatc gacgatttcc tgcacttctt ctttggcttc gtcgcagccg gcgacatcgg
    17401 caaaggtaac tttgttggca tctttgtcca gcaggcgggc gcggcttttg ccgaaggaga
    17461 atgcgccgcc ttttccgccg ccgcccgcct gcatacgcat aaagtagaac catgcgccaa
    17521 tcagcagcag gacgggcagc aggctgtaaa acagggcagt cagcgcgctc ggtttttctt
    17581 ccggcgttac ttttacgcgg acgtttttgt cgagcagtgt tttaatcagg ttgtcatcca
    17641 agggcgcgtt ggtgaagaag gtgcttttgt cggtgcgctc gcccttaatc aggtagccgc
    17701 tgacgacgga tccttcgatg ttgacgccgg atacttcgcc gttgttgacc tgtcggatga
    17761 actgagaata ttcgatttgc ccgttgtctt cttttttgcc gtccaaagcg ttgaacgcag
    17821 ccatcaggcc gatacccaag gcgacccaga caaggattga tttaaaggtg ttccccactt
    17881 agcaaggctc cataattgag gtgtaaaacg gaaatgattg taaagcacgc cgtctgtatt
    17941 gtcagcgttt atttttgccc aataaataaa tctcactgga gcgattgcgc gaggcttcgg
    18001 gtttgcgcgt ctgcacagtg ccgaaaattt cgcgcatggc tgccatgtat tcctgatagc
    18061 ctgcaccctg aaagactttg accaaaaagc tgccgccggt tttcaggtgt tgcgaggcga
    18121 agtccaaagc cagttcgcac agataaaagc tgcgtgcctg atcgcttacg gcgtttcccg
    18181 acatattggg cgccatatcg cagattacaa ggtcgagcgg gcggttgtcc aacaaggttt
    18241 cgaattgcgc caaaacgtcg ttctcgcgga agtcgccctg aatgaaggac acgcccccta
    18301 tggcttccat aggcaggatg tccaaggcga aaaccgttcc ggaagtaccc gtcagcttgg
    18361 cggcaacctg cgaccagctt cccggcgcgc tgcccaagtc ggcaagtacc gtgccgggtt
    18421 tgattatctt gtctttttcg ttgatttcca aaagtttgta tgcggcacgg gcgcggtagc
    18481 cgtctttttg cgccatatgg acgtagtggt cgttgatgtg ttcgtgcagc cacgcttttg
    18541 aggatttgga acgtacagcc atagtggttc gcgggtcgga atgtaaacgg tgtattgtac
    18601 gttaattttg ccgttgccgt gccaaatcgc gtacaatgct gcattatcct ttttattcaa
    18661 acagtaggaa aatggcggat accaaattga acaccaaaga aattttggaa ctgaaagcgc
    18721 gcgcgcacca tctccatcct gttgtgatgg tcggtcagca gggtctgacg gacgcagtca
    18781 tcaaggaaac cgatgcggca ctgacggcgc atgagctgat taaagtgcgc gtattcggcg
    18841 acgaccgtgc cgagcgtatc gaaatctgca ataccttgtg tgaggcggtt gacgcgcaac
    18901 ctgttcggca tatcgggaaa cttttggtat tgtggcgtaa gaatatcgag gcctgacagc
    18961 ctgaagtggt tgttttgcta ttgttctttc aatgggcggc acgctgtcct tcggcgcggc
    19021 atttcggcgt gccgaaaccc tttccggtga aaacggattt tgattaccgc tcgatgccgt
    19081 ctgcaagttg cggcggcttc cgtatgattt gaattgttga caggatgatt ggagggctta
    19141 tgcaatttcc ttaccgcaat gttccggctt cgcgtatgcg ccgtatgcgc agggatgatt
    19201 tttcacgccg cctgatgcgc gagcatatgc tgaccgccga tgatttgatt tatccggtgt
    19261 tcgtattgga gggggcggcg cgcgaggagg atgtgccttc tatgccgggc gtgaagcgtc
    19321 agagtttgga caggctgctg tttacggcgg aagaggcggt gaagctcggt attccgatgt
    19381 tggcactctt tcccgtggtt acggcaaaca aaaccgggcg tgcgcaggag gcgtacaatc
    19441 ccgaaggact cgtgccgtca actgtccgag ccttgcgcga gaggtttccc gaactgggca
    19501 ttatgacgga tgtcgcgctc gatccttata cggtgcacgg tcaggacgga ctgacggacg
    19561 aaaacggtta cgtgatgaat gatgaaaccg tagaagtctt ggtgaaacag gctttatgtc
    19621 atgcagaggc gggcacgcag gtcgttgctc cttccgatat gatggacggg cgtatcggcg
    19681 ccatccgcga ggctttggag gatgccggac atatccatac gcggattatg gcatattccg
    19741 ccaaatatgc ttctgcattc tacggccctt tccgtgatgc ggtaggcagt tcgggcaatt
    19801 tgggaaaggc agataaaaag acctatcaga tggatcctgc aaataccgat gaggcgctgc
    19861 atgaagtggc gctcgatatt caggaaggtg cggatatggt gatggtgaag cccggtttgc
    19921 cgtatttgga cgttgtccgc cgcgtgaagg acgagttcgg cgtaccgact tatgcctatc
    19981 aggtttcggg cgaatatgcg atgttgcagg cggcggttgc caacggctgg ctggacggcg
    20041 gcaaagtggt tttggaaagc ctgctggcat tcaaacgtgc gggtgcggac gggattttga
    20101 cctattacgc cattgaggcg gcaaagatgc tgaagcgttg atatttgatt cgcaatattg
    20161 aaatgccgtc tgaaactatg gtttcagacg gcatttttta cggtttacaa agttgtatcg
    20221 agtgcggcgg aaatatcgtt ccaaatatca tctacgtctt caataccgat ggagaagcgc
    20281 aggagtccga ccctgatgcc catttccatt ttcacattat gcggcacgcc gctgtgagat
    20341 tgggaatagc aatggttgac cagactttcc acgccgccga ggctggaggt cattttgacc
    20401 agtttcatgt ttttaatcac gctgtttgcc gcttcgcgcg tgtcgttttt gagataaacc
    20461 gtaaccacgc cgccgatgcc tttgggcatt tgcgcttggg cgagtgcgta atgttcgtga
    20521 gacggcaggc cgggatggaa cactttttca atggcaggat gggcttccaa acggcgcgca
    20581 atttcgagtg cgtttttgca gtgtgcctcc atacgcaggg caagcgtttt gatgccgcgc
    20641 aacaccagcc agcagtccgt cgggcctgca atcgcgccgg tatgcaccat catatcgtgc
    20701 aaaggctgag ccagctcttt ggttttggca acgacgatgc ccatcaatac gtcggaatgg
    20761 ccgcacaaat atttggtagc ggaatggaat gcaaaatcgc aacccatatc caagggctgt
    20821 tgcagatacg gcgtggcaaa ggtgttgtcg atgccgacca gcgcgtcggc tgctttggct
    20881 ttcgctgcaa gggctttgat gtctaccaag cgtaaaagcg gattggacgg catttccagc
    20941 caaaccagtt tgacattgtg cgctttgagc aattcgtcca aattatcggg attgcccaaa
    21001 tcggcaaaaa caacgttcac cccccatttt tgataaacat cgaccaataa gtcatatgcg
    21061 ccgccgtaaa tatcggcgac cgcgacgatg gtatcgcccg ggcgcaggaa ggtacgccac
    21121 acggcatcaa tccccgccat accgctggaa aacgcaaaac ctgccgcacc gtgttccaaa
    21181 tcggcaacgg tgtcttccaa aatctgacgg gtcgggttgc tcaggcgcga ataacggtaa
    21241 ggcacatttt cgccgatttc gtgcagcgca aacatactgt tttgataaat cggcggcatc
    21301 agcgcgcggt tgtgttcgtc gcaatcgtag ccggaatgga tggcacgggt cgggaatttc
    21361 atctgtttct gccttgtaag atatggataa gtcgggattt tatcactatc ccgaaaatag
    21421 aaacaatcaa tgcagccgcc aaaagcaagt gatataatct cgcatttgca ggcaggcggc
    21481 cgacagcgtt ttttcagacg gcatctgcct gccatacaat acacacatct caataattat
    21541 ctgaatatta aggacaaaca acgcatgaac gccattgcag acgtgcaatc cagcagagat
    21601 ttgcgcaacc tgccgatcaa tcaggtcggc attaaagacc tgcgcttccc gattaccctg
    21661 aaaaccgccg aaggaacaca atccacggtt gctcgcctga cgatgacggt ttatctgccc
    21721 gccgagcaga aagggacgca tatgtcgcgc tttgtcgcat tgatggagca acataccgaa
    21781 gtcttggatt tcgcacaatt gcataggctg actgccgaaa tggtcgcgct tttggattcc
    21841 cgcgccggca aaatcagcgt ttcttttccg tttttccgca agaaaaccgc gccggtatcc
    21901 ggtatccggt ccttactgga ttatgatgtc agcctcacgg gtgaaatgaa agacggggca
    21961 tacggccaca gtatgaaggt catgattccc gtaacctcgc tttgcccgtg ttccaaagaa
    22021 atttcccaat atggcgcgca taatcagcgt tcgcacgtta ccgtcagcct gacttccgat
    22081 gccgaagtcg gtatcgagga agttatcgat tatgtggaaa cgcaggcgag ctgccaactc
    22141 tacggcctgc tcaaacgccc cgatgaaaaa tacgttaccg aaaaggccta cgaaaacccg
    22201 aaattcgtgg aagatatggt gcgcgatgtc gctacttcgc tgattgccga caaacgcatc
    22261 aagagtttcg tcgtcgagag cgagaatttc gagtctatcc acaaccattc ggcttatgcc
    22321 tatatcgcct acccgtaggc gcgtttgcga tgtccaaatg ccgtctgaaa ggcattgggg
    22381 agttattccc gaatctgccg ccgctttgtt ttcccagccg tagagagatg ggtaaaatcc
    22441 gggtgaagct tgatggcggg gacggcttat agggtgcggc agtgccgtat cggtttgaaa
    22501 tcaatttgca atcaaagtaa taaaaggatg cacgatgaca gtattaagca aagagcaggt
    22561 tctatccgca tttaaaaacc gcaaatcgtg ccggcattac gatgcgcacg taaaatcagt
    22621 gccgaggatt ttcagtttat tttagaactc gggcgtttgt cgcccagttc ggtcggttcg
    22681 gagccttggc ggtttgttgt ggttcaaaac cccgaaatcc gacaggcaat caagctgttt
    22741 tcttggggta tggcggatgc tttggatacc gccagtcatt tggtggtgtt tttggcgaag
    22801 aaaaatgccc gcttcgacag cccgtttatg ttggaaagtc tcaaacggcg cggcgttacc
    22861 gaaccggatg ccgtagaaaa atctttggcg aggtatcagg cgtttcaagc tgacgacatc
    22921 aagattttgg acgattcgcg cgccttgttt gactggtgct gccgccacac ctatatcgcg
    22981 ttagccaaca tgatgacggg tgcggcgatg gcgggtatcg attcctgccc ggtggaaggt
    23041 ttcaactatg ccgatatgga acgcgtattg tccgggcagt tcggtttgtt cgatgcggca
    23101 gaatggggcg tgtccgttgc cgcgatattc ggctaccggg ttcaggaaat cgtcacgaaa
    23161 gcgcgcaggc ccttggaaga aaccgttatt tgggcataag gcagtgccgt ctgaaaacgc
    23221 aaggattttc agacggcatt ttttaatgct tatttaaaac gattcgccgg gagcgagata
    23281 acgccatttg ccgggcggca gcctgccgag tttgaccttg cccatgcgga tgcgtttcag
    23341 cccgacgacg cgcagtccga ccagttcgca catacggcgg atttgccgct ttttaccctg
    23401 tttcaacacg aagcgcagtt ggtcttcatt ttgccattct actttggcgg gacgcagttt
    23461 atcaccgtcc aaactcaatc cgtgattcag taaggcaagt cctttttcgt ccaatttgcc
    23521 gcgcacgcgc accaaatatt ctttttcact gccgctgttt tcgccgataa gctgcttggc
    23581 gatacggccg tcttgcgtca acaccagcaa tccgactgaa tcgatatcga gcctgccggc
    23641 gggggcaaga ccgattttgt gtttcggatc gaaactgatg cggctggtgt cgccttccca
    23701 gcaattttca ggggtaatca gttcggcggc ggatttatag cctttttccg cttgtgcgct
    23761 gacatagccg acgggtttgt tcagcaggat ggtaatgcgt gccgcctgct gttcgtgggc
    23821 tttcttgttc agttcgatac ggtctgccgg tgaaactttc tgaccgagta cggcggtttt
    23881 gccgttgacc gttacccagc cctgttcgat atggccgtcg gcttcgcggc gcgaacaaag
    23941 ccccagttgt gccatacgtt tggagaggcg tatggtatct tctgtatggt cggaggaaat
    24001 tttggaattc atgggtactt tcgggtgaag gccggcttag actaattgct cgccccagtg
    24061 cagtttttgg cgcagggttt tgaaatattg gtagtcggtc gggtgtagga tgcgtaaggg
    24121 attgtggtag cggcggatga tgatgcggtc gaggttttgc acgtcgatga aggattgtcc
    24181 gtcgaaatga acgcgcgcgt cgccgccttg ggtaacgagg atttcgattt cggacgtgtc
    24241 tggaatggcg atggggcggt tagtcataga ttgcgggcag atggggacga gcgtgaaggc
    24301 gtgtaatcct gcctgcatga ttgggccgcc ggcggcaagc gaataggcgg tcgatccggt
    24361 gggggtggag acaatcagcc cgtccgaacg ttgtgtatag acgaattcct gattgacgaa
    24421 gacttcaaat tcaatcatct gtccggcacc gccgcgggag aggacggcat cgttgagggc
    24481 gagggcgcgt tcggcggttt tgccttcgcg gatcagtgcg gcttcaatca ggatgcgctc
    24541 ttcggcaagg tattttcctt ctaaaacggg caatagcttg tccgtcatat attcgcgggg
    24601 aatttgggta agaaagccca aatgaccttg gttgatgccg ataatcggaa cggcgcgggg
    24661 ggtaatttcg cgggcggcag agagaaaggt gccgtctccg cctaagacgg cgaccaggtc
    24721 gcagtattgc cccagttcgg tcttgttgac gatatggcag ccgtcggtgt cttgggtata
    24781 gatgcagcat tcccttacgc cgacttcgtc gagatagacg gtaaagccgt gctgcttcaa
    24841 aaaggtaatc agcgtgtgtg cggtatcttg gatgtcgggc gtgttggggc gggttacgat
    24901 accgatgttg tgaaaagggc tgttcatgtc ggatgccgtc tgaaggttag tctatccaaa
    24961 tgtcgcgttc gagcctgtcg aggcgttcgt tgaggcgttc cacgccgtcg cgcagtctgc
    25021 ttatttcgtc gaggcagtcg gcaagggctt cgttgccggt gtttgcggac tcgggttcgc
    25081 gggaaaatcc gccgatttgt tcggcgatgt tcctgccgat ttgtttgatg ccgtgtccga
    25141 tgtcggtggc acggctgccg atgcctgcct gcgtgccgaa aatccgtgcc aattcgtccg
    25201 atgcgcggga acgcaggctg ccgagcaggg acagtaccgc gatgccgagg atgaggtcgc
    25261 cttcgagcct gatgtcgcca gccccgggtt cgccgccttg gaggattttc cgtatcgcgc
    25321 tgttgcggaa ggtaatttcg gtgtctgcaa agccgtttcc cgccgagagc aaaccgtctt
    25381 ctgtgatgcg tcccgccagt ttcagcccgg caatgttcag ggtcagtgtt ttgcctgcaa
    25441 aggaggtaag ttccgagcgg ctgtccgggc tttgcagaat caggcggttg atgatgggga
    25501 ggagggcgga catattttct gattggggcg gagaatgcct gttgttgctg ttgccgctta
    25561 ttttacaggc ttaagccgtt atcgcaaacg gtacggatga ttttgcccac gctgtcgtcg
    25621 ggtgagaaat ccggcgcggg caggccgagt ttggcggctt cttccgtata aaattcgcgg
    25681 cgtgtcgggt ggcgcggttc gataatgttt ttcagccgcc tgccgccggg gttggatgcc
    25741 gtctgaaaca ggttttcgac ggcgatgtcg cggtggacga tattgacagg ccggttgccg
    25801 ccttggatgt tttgcttttg cacgaggcgg ctgacgggat ggcgttcggc gcaataaagc
    25861 ccgcccagcc gcaggatgtc gatgttcgga acgccgttgt cgagcaggtg ttgttcggcg
    25921 gcaaggattt gtcgggcgga ctcggtttgc ggatcgggtg cggcggtttc gtcgcattct
    25981 cgcgctttat cgccgtaaac gcttgtgctg cttgtgaaaa tcaggtgttg cacgttgcac
    26041 gcccgggcaa gctctgccca ttgtttgacg gtgtcggcgt aatgcgccaa aaaggagggc
    26101 ggcagcagga agaaccagac gggtttgtcg gcgtgatgcc gccacaatgc cgtctgaaag
    26161 gcatcggtac ggttgaggtc gaaggtgtcg aggtgtatgg gcaggttgat gtcgtccgaa
    26221 gtcaggctgc gttttatggc ggcgacgcgg ctgccgtgtc ggtaaaactt ttgtgccagc
    26281 ggcaggccga ggtaacctag gcctgtgatg gagatatggg gcggggggac tgcgcgcatt
    26341 cgctgatacc gtcgggtaag tgccgtctga aggctgattc ggacgttatg ggtttacggg
    26401 ttgccgttgc cgattttgcg gtcgtattcc gcgcggtgtt cgggcaaaag ataggggcga
    26461 aggaggctta aggtacgacg gacgccgcgt gctttggagt cttcggtcag cttggtacgg
    26521 ccgcgcaggg aactgtcgaa gtcgaaccag tatttcgtaa ccatccacat attgacggcg
    26581 aggtcgttca tagcggtttg gtcggcgttg atgacgttca gcccgttgag ctgggtcagc
    26641 agtttgacta gaagcggcga gactttggct tgggtaaagg tattgtgttc gcccaacaat
    26701 tcggcactgc gcgcaagcag ggtgtttacg tcgctaaaga ggaagcggta ttcccacatg
    26761 acatcgtaaa tgcctgccat atagttgata gagtcttcca catcagaggg caacacggct
    26821 tcattcaggt atgccaacag ggcttcgctg taacgtttga agagttggac gatgatttcg
    26881 tctttgttgc ggaagtggta ataaagattg cccggactga tgcccaaatg cgccgcgata
    26941 tggttggtgc tgatgttgcg ctcgccttcc tcgttgaaaa gcgcaaggct ggcgtcgatg
    27001 atgcgggtgt aagtattggt ttttgcaatg cgggtcacgg gcatactcct tggatttaca
    27061 ggctgaacga agtgggcagc caattgggtt cggcgtgtaa ttctacctga aaccgagcaa
    27121 atactgtaaa tttgatgtgt tgcgccaact gccggacatc gtttgccgag gcgttgtttt
    27181 tgtttaccaa aaccaatgcc tgtttatcgt gtaccgccgc accgccgatt tggaagccct
    27241 tcagacggca ttggtcgatc agccagccgg cggcgagttt gaccgaaccg tcgggctgcg
    27301 gatagcgcgg catatcggga tgccgctgca acagggtggc ggctttttcc gcgctgacga
    27361 cggggttttt aaagaaactg ccgacattgc ccaaaacttt cgggtcgggt aatttgctgt
    27421 tgcggatggc ggataccgca tcggaaacgt ctttcgccgt cgcctcccta cctgcactca
    27481 attcggcaac cttcgccgcc aaatcgccgt agcccaagtt cggcacaaaa tgcgttttta
    27541 atgcaaatac gaccgaaaca atcacataac gccctttgcc ttcctgcttg aacaggcttt
    27601 cgcggtaggc gaagcggcag tcggcattgg aaagggttac aaaggtttcc gtatccaaat
    27661 cgaagcagcg cacgctgtga atcacatctt tcgcctccac gccgtatgcg ccgatgttct
    27721 gcacgggcga cgcgccgacc gtacccggaa tcaggctcag gttttccaaa ccgctcaaac
    27781 ccagcgcgac ggtgtgcaac acgaaatcgt gccaaatttc gcccgcctgc gcttcaatca
    27841 gaaccatgcc gtctgagcgc gcaatctcgc gtatgccctt gttttccata tggacgacca
    27901 agccgtcgta atcctgcatc aaaaggatgt tgctgccgcc gcccagccat aaaacagtat
    27961 cgcggtcgaa ctcgggcagt cggacgatgt cgcgcaattc gtcggcgtgt ttaagcgcga
    28021 taaaggcccg ggcttgggcg tgcaggccga aagtgttgta gggggtgagg tcggttcggt
    28081 atcggatggg ttgcatggtt tgagctttaa ctgtatttga attgaagtgt gctgcgtttt
    28141 cagacggcct cgtgtgattt gaccaactcc atactgtatt tttccaagca ccacaccaag
    28201 gcgacggctg cgatggtgag cgaggcaatc aatgccgtcc agaagccgta aatgcccata
    28261 tcgaaacggt aggcgagcag atagcccggc agcaggccgc agccccagaa ggcggcggcg
    28321 tggatgaaca tcggcacctt ggtgactttg tagccgcgca gggcatagga cgcgatacat
    28381 tgggtgaagt ctgccggttg gaacaggccg gcgaacagca ggacggtgga ggcgatgctt
    28441 aaaactgccg gatcatcgtt gtacatgctt gccagcggcg aacggaataa taccaaggaa
    28501 agcacggtaa tcacggcgag cacccagccc gacaccagcg acactcctga aatataacgc
    28561 gcccgcgaaa attcgcgccg cccaagcgaa aagccgatgc gcaccgtccc tgccgagccg
    28621 acgctttgcg gaatcatata gagaatcccc gacaaactga tgccgacctg ctgcgccgcc
    28681 acataatcct cgccgaaagg cgcaatcaaa aacacgataa acgaaaacgc gctggcttcc
    28741 aaaaaataag acagcccgat gggcgcgccg attttccaaa tctgtttgaa caccgcccaa
    28801 tccggtttgc cgaatttcgc tgtcagtccg aacgggcgga agaatttttc cttggcgata
    28861 taaatccaca atgccagcgc gctgaaccaa aacaccgcca ttgtcgccac gccgcaacct
    28921 gcgccaccca aagcgggcat accgaatttg ccgtaaacga aaatatagtt cagcggcacg
    28981 ttcaacacaa acgccgcaaa gctgaccaac ataatcaggc gcgggcggtt caggctggaa
    29041 gcgtaggcgt gcagtgcgcg gtgtaccatt gccgccggca tcgccaagct ggtgaacagc
    29101 atatactgcg ccattgtgcc ttccacataa tcgctcaaag tcagccagtt gcggaacggc
    29161 gtaatcgccg cccacatcaa aatcatgccg aaaatcccca aaatcagccc gaaccaaatc
    29221 ccctgccgcc ccgtttcgcc tgcttcaccg gttttacccg cgccgtaaag ctgggcaatc
    29281 atcgggttca gcgccgccat aatgcccata aaggtaatat aaaccgtggc aaacgcgctg
    29341 ctgcccaaag ccaccgccgc caaatcttcc ttgcccgcac cgcccgccat cacggtatcg
    29401 acgaaaccga tgcccacctg cgcgacctgc gccaacagca tgggcagggc aagggcggtc
    29461 agcaggcgga tttctttcag gaagacggaa aaggaaaagc ggtcgaggtc gagcagcata
    29521 agtgttcagt caataaaaat gccgtctgaa acaaaaaaaa cggcagcggg aagtgatgag
    29581 aaataatggt gcacattata tagtaaaaaa taccgtgccg tcagacggcg gatacggggt
    29641 ataaaagtat attcagattg tgtgtatttt atggtaaagt ttggttttaa cgacttgacg
    29701 gcattgagcc gtcggacagg ggctgttcgg attctgaatc ggaaggaagc atcgccgttt
    29761 tgacagcggc gtgatgcgtt gcggcaaaga tgccgtctga ttgcggatcg ggcagtcttt
    29821 tgtgtttaca ggataaaaca gaaggcagat tctcatgcag acatggcagc ttccggaaca
    29881 tatcgccgac gtactgccca cgaacgcgcg gcagcttgaa agcgcgcgcg agcagttgtt
    29941 ggcactgttc cgcgtacacg gttatgaact ggtacagcct ccgctgatgg agtacgcaca
    30001 ttccctgctg acgcatatcg atgcggggct ttcactgaaa accattttgg taacggacag
    30061 gctcagcggc aggcagttgg gcatacgcgc cgacatcacg ccgcaggtgg cgcgtatcga
    30121 tgcccatctt ttgtccgcca accaagggat taaccggttg tgttatgccg gtccggtgtt
    30181 gcacgcgcag cccgacggtc tgccgaatat gcgcgaaccc ttgcaggcag gggcggaaat
    30241 gtacggtttt gccgacatcc gtggcgacat cgagctgata gaccttatgc tgaaaagcat
    30301 gaaaattgcc gatatgggca aagtgctgct ttcgctgggg catatcggca tattccgcgc
    30361 cttgtccgat gcggcgcatt tggatgcggg gcagtccgca gcgctgcttg ccttgatgca
    30421 ggataaagat accgggtcgg tcgaagcgca ggtcaaggct tggaagctgg acggtatgtg
    30481 ggcaaaagca ttctcgttgc tgccgcgcct gtacggcggg cgtgaagtgt tgtccgacgc
    30541 gcgcggacgg ttgccggatt tgtcggcggt cggcggcgcg ttggacgaat tgcaggcggt
    30601 gtgcgacgca ttccccgata atgaaatcca tatcgacttg tccgagctgc gcgtcgacaa
    30661 ttaccacacg ggcttgctgt atgccgccta tgccgccgat ttccacgacg cggtcgcgcg
    30721 cggcgggcgt tatgacggat tgggcggata tttcggcagg gcgcgcccgg caacgggatt
    30781 cagtttcgac ttacgcagct ttatcgggcg tttgcccgcc gtcgaacggc agcccgccgt
    30841 gttggtcgat gcggaagatg cagaagcggc gcgcgaagcg gtcgaagcct tgcgtgaaca
    30901 agggcagtgt gtcgtgattg actacggtat cggacacaat gtttcggaag agcttgcagg
    30961 ccgtctgaaa aagacggacg gcgtttggca ggtcgtgaaa cgctaaatac ccgttcatag
    31021 cggatgaaag gcaaaccggg gcggggcgca aagccgcacc ggtttgggga ttttccgcaa
    31081 taatttttaa tatcgatagg ttatatggct atggctaaaa atgttgtagt aatcggcgca
    31141 cagtggggcg acgagggtaa aggtaaaatc gttgactggc tggcggaaga agccggcggc
    31201 gtcgtgcgct tccaaggcgg ccacaatgcg ggccatacct tggtcgtcgg cggcaaaaaa
    31261 accattttgc gcctgattcc gagcggtatc ctgcacgaag gattggattg cttcatcggt
    31321 tcgggcgttg tcgtttcccc cgaagccctg ttgggcgaaa ttgacgagtt gaacgcggca
    31381 ggcgtgaaaa acgtcgaagg ccgtctgaaa atcgcgccga cctgcccgct gatcctgcct
    31441 taccacatcg cgctcgacca agcccgcgaa gcatcgcgcg gcaaaggcaa aatcggcacg
    31501 accggccgcg gcatcggccc tgcctacgaa gacaaagtgg cacgccgcgc cattcgcgcc
    31561 gccgatttgc tgcatcctga aaaactgcgt gaaaaactgg atgccgtcct tgcctattac
    31621 aacgtccaac tccaatacct gcacaacgcc ggaccggtta aagcggaaga cgtgatggcg
    31681 gttatcgaaa aagtcgcgcc gcgcattgcg ccgatgattg ccgacgtgtc ccgcgtgttg
    31741 aacgaaaaaa acaaaaacgg cgaaaaactg ctgtttgaag gcgcgcaagg tgcgttgttg
    31801 gacatcgact acggcactta ccccttcgtt acctcgtcca actgtctcgc cggcgcggct
    31861 tcggcaggcg cgggcgtagg tcctcaaatg ctggattatg ttttgggcat cgtcaaagcc
    31921 tataccacgc gcgtcggttc gggcccgttc ccgaccgaat tgttcgacga agtaggcgca
    31981 ggtttggcgg agcgcggaca cgaattcggt tcggtaaccg gccgcgcgcg ccgctgcggc
    32041 tggtttgatg ccgccgccct gaaacgctcc atccaaatca acggcatttc cggtatgtgc
    32101 attaccaaac tcgatgtaat ggacggcgtt gaaaccatca atatctgcgt cggctacgaa
    32161 ttgccaggcg gcggcaaaac cgacatcctg ccttgcggtt cggatgcggt ggaaacctgc
    32221 aaaccgattt acgaaaccat gcccggctgg cgcgaatcga ctgtcggcgt gaaaagctac
    32281 gacgcattgc ctgccaatgc caaagcatat ttgaaacgga ttgaagaagt ctgcggcgcg
    32341 ccggtcgcca tcgtctccac cggccccgac cgcgaagaaa cgattgtgct gcatcatccg
    32401 ttcgcataag gttttgcagt aaaaatgccg tctgaagccc taattggttt cagacggcat
    32461 ttttaccgct gttttatctg atattttctg tccggacacg gtttgtcggg gatatatcaa
    32521 tgcggcgtat ccggtgcgga aatggatacg gttggtgccg gtatggaaac ctgatgtttt
    32581 cagtcggcat atacgaaaaa accgtactgc ttgtgcgtac ggttttttgt cgtttcaaat
    32641 cggtttaaag cgatttgagg cgggcgattc ggttgtccag cgaagggtgg gtgctgagca
    32701 gggagtcgcg cgtatctccg gcgatgccca ttgcgttcat ttcttcgggc aaatcgaccg
    32761 ggttgccttt aagcctttgc agggcggaaa tcattttcgg tgcgccgacc agttttgccg
    32821 cgcccgcgtc ggcgcggtat tcgcgttggc ggctgaacca catgacaatc aggctggcaa
    32881 ggaagccgaa caggatttgg aataccatgc tgactaggaa ataagttccc tgggactggc
    32941 tgccgtcgtt gtttcgggca atcaggttgg caataatgcg cgacaggaac acgacaaagg
    33001 tattgaccac gccttgaatc agcgtcagcg taaccatgtc gccgttgccg acgtgcgcca
    33061 tttcgtgcgc caacacggct tccacttcgt cgcgcgtcat atggtcgagc aaaccggtgc
    33121 tgacggcgat cagggagctg tttctcgatg cgcccgtggc aaaggcattg ggttcggggg
    33181 agtggtagat ggcgacttct ggcgttttca ggttccattg ccgcgcttgg gcttcgacag
    33241 tgttcagaag ccaggcttct tcttcggtgc gcggcgtgtc gatgacttcc gcaccgaccg
    33301 attgtttggc gataaatttg gacatcagca gcgaaataat cgaaccagtg aagccgacga
    33361 cggcggaata cgccaacagg ctgcccgcgc cgccccggct gttgatgccc agaaccgcca
    33421 aaacaatgtt gattacgacc aaaacagcga tattggtagc caaaaacaga aaaatgcgtt
    33481 tcacggatgt tcctttttgg tagggtgtga tgttttgaaa ctttggggat tgtcccaaaa
    33541 agttgccgcc ttgtgaatat caggctcggc aaaggtatgc aaaacatttg cttgcaaatg
    33601 gcagtttgtg cagttggttt ttgaactatt gcgccaagcc gtgtagaatc gtaaaccatc
    33661 tgtttgattc caataaacac atttaaaagg atcacttcat gaaagcatta cttttaggcg
    33721 caccgggcgc gggcaaaggc actcaggcgc aattcatcac cgccgcgttc ggcattccgc
    33781 aaatctctac cggcgacatg ctccgtgccg cgattaaggc aggcacgccc ttgggtttgg
    33841 aagcgaaaaa aatcatcgat gaaggcggtt tggtgcgcga cgacatcatt atcggcatgg
    33901 tcaaagaacg catcgcgcaa gacgactgca aaaacggttt cctgttcgac ggtttcccgc
    33961 gtacattggc gcaagccgaa gcgatggtgg aagcaggcgt gggtttggac gcggtcgttg
    34021 aaatcgacgt atccgacagc gtgattgtcg accgcatgag cggccgccgc gtgcatttgg
    34081 cttccggccg tacttaccac gttacctaca atccgcctaa aaccgaaggc aaagacgacg
    34141 taaccggcga agatttgatt cagcgcgacg acgacaaaga agaaaccgtg aaaaaacgtc
    34201 ttgccgttta ccacgagcaa accgaagttt tggttgattt ttacagcaag ctggaaggcg
    34261 aacacgcgcc gaaatacatc aaagtcgacg gtacccaagc agtagaagct gtgaaagccg
    34321 aagtattggg cgcattgggc aaataaatcg aaaaggtcgt acccacgggc aggcttcgca
    34381 ctctgaaaac agaaaatcag gttttcagac gacctgtttt tgataaacag cgtgttgcaa
    34441 ccgaaaaata atcattcggc gtcattcccg cgcaggcggg aatccatttc tgaatttggg
    34501 caatcgctgt ttaaatctga taaactgagt tttatcaatg gattcccgcc cgcgcgggaa
    34561 tgacggctga tgtaccggtt caaatttatc cgaaacagtt tgtcgggggc ttgagtccgc
    34621 gtaggtcgga catcaatgcc cggcctacgg tttgaattta cgttgttata gcggattaac
    34681 aaaaatcagg acaaggcggc gggccgcaga cagtacggat agtacggaac cggttcgcct
    34741 ggtgcttggg cgccttaggg aatcgttccc tttgagccgg ggcggggcaa cgacgtaccg
    34801 gtttttgtta atccgctata ctgcgaaaaa gacgataaag gttgtctgaa aacccgaaac
    34861 gaaaacacca tgaatccttt aatcaccgac ttccaaactc cgcaacaacg tacccccgtc
    34921 atcgttgccc ttgattttgc caacgaaaaa gacacgctcg gattcgtccg caaccttgat
    34981 ccggcgttgt gccaaatcaa aatcggcaaa gagctgttta ccgcgacggg gcgcagtttg
    35041 gcagaaagcc tgattcatca gggtttcaaa ctctttcttg atttgaaata ccacgatatt
    35101 ccccacaccg tcgcgcaggc gtgtaaagtc gccgccgata tgggcgtgtg gatggtcgat
    35161 atgcacgcgt cgggcggcag acgtatgatg gaagccgccg ccgaagccgt tgccggatac
    35221 ggcacgaaac cgctcttaat cggcgtaacc gtgttgacca gcatggagca aagcgatttg
    35281 gcggaaatcg gtttgaacac cgcccctgaa gaacaagtca tccgtttggc aaaactggca
    35341 caaagttcgg gcttggacgg cgtggtctgt tccgcccaag aagccgcgcc gctgcgccgc
    35401 gaattgggac gggattttgt cttggttaca ccgggtatcc gcttggacgt tgccggcaac
    35461 aacgacgacc aacgccgcat tatgacaccc gccgaagcct tggcggcggg ttcgacttat
    35521 ctggtgatgg gccgccccgt tacccgagcc gccgatccgg tcgccgtatt gcgcgaagtg
    35581 aaccgcgtgg caaaccttga agcaaactga ttttcaggcg gtcttacagg ttaaggttgt
    35641 ctgaacaaaa cacaacggag gcaatatgcc cgccaagttc caacaagaaa ccctcaaatc
    35701 ccgtttcgca caagccaaag ttcttgttgt cggcgacgtg atgctcgacc gctattggtt
    35761 tggcgacgtg tcccgaattt cgcccgaagc acccgtgccg gtggcaaaaa tcggacgaat
    35821 cgaccaacgg gcgggcggcg cggcgaacgt tgcgcgcaac atcgcttcgt tgggcggcag
    35881 ggcagggctg ttgtccgtaa ccggcgacga cgaagccgcc gccgcgctcg acgcgctgat
    35941 ggtgcaggac ggcgtcgcct cctatctgat gcgcgacaaa caaatcgcca ccaccgtcaa
    36001 actgcgcgtc gtcgcccgca accagcagct tatccgcctt gattttgaag aacatcccaa
    36061 ccgcgaagtg ttggaacaaa tcaagcggaa ataccgtgaa atcttgcccg aatacgacgc
    36121 aatcattttt tcggactacg gcaaaggcgg tctgtcgcat atctccgata tgatcgattg
    36181 ggcgaaacat gtcggcaaaa ccgtcttaat cgaccccaaa ggcgacgatt acgaaaaata
    36241 tgtcggcgca actctgatta cgcccaactg cgccgaattg aaagaagtgg tcggcagttg
    36301 gaaaaacgaa ggcgatctga ccgaaaaagc gcaaaacctg cgccgccacc tcgacttgac
    36361 cgccgttttg ctgacccgga gcgaagaggg catgaccttg ttcagcgaag gcgaacccat
    36421 ttaccagccc acccgcgccc aagaagttta cgacgtgtcc ggcgcaggcg acaccgtcat
    36481 tgccggaatg ggcttggggc tggcggcagg ctgcaccatg cccgaagcca tgtaccttgc
    36541 caatactgcg gccggggttg tcgtggcgaa actcggtacg gcggtttgct cgtttgcaga
    36601 gttggttgaa gcactggacg ggcaataaat cttttcagac ggcatgacca tccaatgccg
    36661 tctgaaaccc tcaaaacaaa ggaaaccgaa tatgaccatc atcgtaacag gcgcggccgg
    36721 ctttatcggc agcaacatcg tcaaagccct caaccaacgc ggcattaccg acatcgtcgc
    36781 cgtcgataat ctgacaaaag gcgaaaaatt caaaaacctt gccgagtgcg aaatcgccca
    36841 ctacctcgac aaacacgaat ttatccgcca agtgagggaa cacattttac cttatcaaaa
    36901 catcgaagcc gttttccatc aaggcgcgtg ttccgatacg atgaaccacg acggtttgta
    36961 tatgatggaa aacaactacc agtacacgct ggatttgttg gactggtgtc aggacgaacg
    37021 catccccttc ctttatgcct ccagtgcggc ggtttacggc aaaggcgaaa tcttccgcga
    37081 agagcgcgaa ctcgaaaaac cgcttaatgt gtacggctac tccaaattcc tgtttgacca
    37141 agtattgcgc cgccgcatga aagaaggtct caccgcccaa gtcgtcggct tccgctactt
    37201 caacgtttac ggacaacacg aacaacacaa aggccgcatg gcatccgtcg ccttccacca
    37261 tttccaccaa taccgcgaac acggttacgt caacctgttc ggcagcaacg acggctacgg
    37321 caacggcgaa caaacccgcg acttcgtcag cgtcgaagac gtcgccaaaa tcaacctcta
    37381 cttcttcgac catcccgaac tttccggcat ctacaacctc ggcaccggcc gcagccaaca
    37441 gttcaacgaa ctcgccgccg ccgccgtcaa cgcctgccgc gccgccgaag gcaaatctga
    37501 attgagcttg aaagagttgg tagaagaaga acttatccgc tatatcccct ttcccgacgc
    37561 gctcaaaggc aaataccagg gcttcaccca agccgacatc accaaattgc gcgaagccgg
    37621 atataaggaa gaatttttcg atgtcaaagc aggtgtcaac cgctacgtca aatggatgct
    37681 ggaaaatttg gcttaatttg aatgcccgta aaaaaatcgt ctgaaaatat caggcgattt
    37741 tgatttgttt aactttatat atggatttcg atgatgaccg aaatgcaaca acgcgcccaa
    37801 ctgcaccgcc aaatttggaa aatcgccgac gaagtacgcg gcgcggtgga tggctgggac
    37861 tttaaacaat acgttctcgg cacacttttc taccgcttta tcagcgaaaa cttcaccgac
    37921 tatatgcagg ccggcgacag cagcattgat tacgccgcta tgccggacag catcatcacg
    37981 cccgaaatca aagacgatgc cgtcaaagtc aaaggctatt tcatctaccc cggccagctt
    38041 ttttgcaata ttgccgccga agcccatcaa aacgaagagc tcaacaccaa gctgaaagaa
    38101 atctttaccg cgattgaaag ctccgcctcc ggctacccgt ccgaacaagg catcaaaggc
    38161 ttgtttgacg acttcgaccc accagcagcc ggctcggcag caccgttgcc gacaaaaaca
    38221 aacgccttgc cgccgtcctt aaaggcgtgg cggaactcga tttcggcaat tttgaagacc
    38281 accgcatcga ccttttcggt gatgcctacg aatacctgat ttccaactac gccgccaacg
    38341 caggcaaatc cggcggcgaa tttttcaccc cgcaaagcgt ctccaagctg attgcgcggc
    38401 tggcggtgca cgggcaggag aaagtcaaca aaatctacga ccccgcctgc ggctcgggca
    38461 gcctgctctt gcaggcgaaa aaacagtttg acgaacacat catcgaagaa ggcttcttcg
    38521 ggcaggaaat caaccacacc acctacaacc tcgcccgcat gaatatgttt ctgcacaacg
    38581 tcaattacaa caaattccac atcgaattgg gcgacacgct gaccaacccc aaactcaaag
    38641 acagcaaacc ctttgatgcc gtcgtctcca atccgcccta ttccatcgac tggataggca
    38701 gcgacgaccc caccttgatc aacgacgacc gctttgcccc cgcaggcgta ctcgcaccga
    38761 aatccaaagc cgattttgcc ttcatcctgc acgcactgaa ctacctttcc ggcagaggcc
    38821 gcgccgctat cgtctcattc cccggcattt tctatcgcgg cggcgcagag cagaaaatcc
    38881 gccaatatct ggtggagggc aactatgtgg aaaccgtgat tgcccttgcg cccaatctct
    38941 tttacggcac ctgcatcgcc gtcaatatcc tggttttgtc caaacacaaa gacaataccg
    39001 acatccaatt catcgacgca agcggcttct ttaaaaaaga aaccaacaac aacgtcttaa
    39061 ccgaagaaca cattgccgaa atcgtcaaac tcttcgccga caaagccgat gtgccgcata
    39121 tcgcccaaaa cgccgcccag caaaccgtca aagacaacgg ctacaacctc gccgtcagca
    39181 gctatgtcga agccgaagac acccgcgagg tcatcgacat cagacagctc aacgccgaaa
    39241 tcagcgaaac cgtcgccaaa atcgaacggc tgcggcgtga aattgacgaa gtgattgcag
    39301 agattgaaac ctaggcagtt gttgcatatt ttgcaacaac tgaatgggaa agaggccgtc
    39361 tgaaaatacg ggcggcaacc tgtaagcaat ccttacaagt tcaaatcaag aaattttcgg
    39421 ggaaaataca tgacaacaga aaataacgct tttgaaaacg ccaaacacat cgacgaaaca
    39481 ggcaatgaat attggtcggc gcgcaccttg cagcaaatct tggaatattc cgaatggcgc
    39541 aatttccaac gggccattga taaagccata accgcttgcg aaacatcagg aaatgacaaa
    39601 aatcatcatt ttgttgaaac caacaaaatg atagcccttg ggaaaggcgg gcagcgcgaa
    39661 gtggcggatt accgcctttc ccgctatgcc tgctacctga ttgtgcaaaa cggcgatccg
    39721 tccaaaagcg tcattgccgc agggcaaacc tactttgccg tgcaagcccg ccgccaagag
    39781 ctgcaagacg aggcagcatt caggagtttg ggcgaagaca aacaacgcct gctgcttcgc
    39841 aggcagctgc gcgaacacaa taccgacctt gccgccgcag ccaaggatgc aggcgtagaa
    39901 aaacccgttg agtacgccgt cttccaaaac cacggctatc gggggctata cggaggactg
    39961 gacaagcagg gcatacacag ccgcaaaggc ttgaagaaaa gccagagaat cctagaccac
    40021 atgaacgcca gcgaaccggc tgccaatctg tttcgcgcca cgcaaaccga agaaaaacta
    40081 cgccgcaaaa acatccaagg caaaacacag gcaaaccggg tgcatttcga agtcggacaa
    40141 aaagtgcgcc aaaccattga agaactgggc ggcatcatgc ctgaaaacca gcccgtaccc
    40201 gagaaaagca tcaaacagct tgagaacgaa gaacagaaaa ggcttgccgc aaccgaacag
    40261 catcaaaacg gcaaaaaata accgcattca ggctacctga aaaagcagcc tgcacacgat
    40321 ttcaggcagc ctgaaagcag gacgggtttc agcccgcaga aacaacggca aacggacaga
    40381 gtgagccgaa acccgccccg caaccgcccc acatcccgcc gcagcgggaa ggaaacggaa
    40441 aacaaccatg gatatgcaaa gcaaagcgaa aaaattgatt gagatgattc agacggcacc
    40501 ggtggagtgg aagccattgg gggaggtttt agttcgtaca aaaggaacta agataactgc
    40561 tggacaaatg aaagaaatgc ataaagataa tgcgccgtta aagatttttg caggaggaaa
    40621 aacttttgca ttagttgact ttgatgatgt tcctgataag gatatccata gagagccttc
    40681 tattatcgtt aaatcaagag gtattattga attcgaatat tacgataaac cattttcgca
    40741 taaaaa
//
LOCUS       DAWXHA010000004        38230 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.004, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000004 DAWXHA010000000
VERSION     DAWXHA010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38230
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.004"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            76..612
                     /locus_tag="AABD07_000156"
     CDS             76..612
                     /locus_tag="AABD07_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFB2354780.1"
                     /translation="MRTLPGWNASSPSKPTITKKKNLLHEIFSKSRIGDTELFAVDEN
                     LVKRLFLSLRGEIVFPKNETAESEFEKSVHERRQEGNAGSGRKQLLDLVRRGHREYPY
                     ALPRLLADAASYKPKKSKIRLFKEAYSRKSGRRLTDEIADGIHIYTWFSRVNLEKAYS
                     EYLELFKSESDAGGRKPR"
     gene            648..1400
                     /locus_tag="AABD07_000157"
     CDS             648..1400
                     /locus_tag="AABD07_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HFB2354781.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIS
                     ALDFAMVKVPFFQDGEICEHMWIDDIYFDGLYIYGVLNNEPGGLTNVEQGESVCVPVG
                     DISDWMFVCNGIPYGGFTVQAMRGQMTEEERTEHDTAWGIDFGDPGQVLPVYEEKEHP
                     ENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAMAGNALMVQAMLEYGA
                     NPASKTSEGYTALDFARLTGWQNVADLLEPRH"
     gene            1456..1797
                     /gene="fdx"
                     /locus_tag="AABD07_000158"
     CDS             1456..1797
                     /gene="fdx"
                     /locus_tag="AABD07_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HFB2354782.1"
                     /translation="MPKITVLPHATLCPEGAVIDNAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPAELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(1857..2400)
                     /locus_tag="AABD07_000159"
                     /pseudo
     CDS             complement(1857..2400)
                     /locus_tag="AABD07_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448873.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            2610..2807
                     /gene="iscX"
                     /locus_tag="AABD07_000160"
     CDS             2610..2807
                     /gene="iscX"
                     /locus_tag="AABD07_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HFB2354783.1"
                     /translation="MKWTDTRRIAEELYDLHGEAIDPKTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(2875..3276)
                     /locus_tag="AABD07_000161"
     CDS             complement(2875..3276)
                     /locus_tag="AABD07_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFB2354784.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPHKIKVKGLNHQRRPAPEARLLYEEDAKTAALREECKQL
                     DQFSRITSAHPDGRPTKRDRRQLDRLKKGDW"
     gene            3488..4441
                     /locus_tag="AABD07_000162"
     CDS             3488..4441
                     /locus_tag="AABD07_000162"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HFB2354785.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVVVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFS"
     gene            4488..5825
                     /gene="tilS"
                     /locus_tag="AABD07_000163"
     CDS             4488..5825
                     /gene="tilS"
                     /locus_tag="AABD07_000163"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HFB2354786.1"
                     /translation="MLFLYRDEAVLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSV
                     VLLHLLVCAGKRAGFVPEALHIHHGLSPRADDWADFCRNYCDMLGVGLETVKVCVEKN
                     GLGIEAAARQKRYAEFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPAVRP
                     LGENGIIWRPLLPFSRQDIWDYARKHGLPNIEDESNTDTAYLRNRFRHRILPELSAQI
                     PHFGRHVLNNVRALQEDLALLEEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRNF
                     LKENGIPVPNQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFASEQLAKPAFLK
                     DGTISGNLKKILTEHRFVLKRHPFGLPEAMLEQDGILRTVAASDTLAVGGIHKNVKKI
                     LQGKRVLPFLRPIWPLVADSGNRPLALANCCADFQISVSDGILPVHPDFPILF"
     gene            5899..6684
                     /locus_tag="AABD07_000164"
     CDS             5899..6684
                     /locus_tag="AABD07_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HFB2354787.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEAKMPSEEVLKLTAVLPEDGIFSVSDGILKKISSLSCADEILTLIDI
                     PLGGTLPDKGDCAVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLLDIYSQADLEIWLAHYEDRVFATALREEKQAVLYGEDLCEPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRAAY"
     gene            6694..6891
                     /locus_tag="AABD07_000165"
     CDS             6694..6891
                     /locus_tag="AABD07_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354788.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILSSNAVAAAVLFWIWWKWF"
     gene            7153..7506
                     /locus_tag="AABD07_000166"
     CDS             7153..7506
                     /locus_tag="AABD07_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354789.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLP
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEEQ"
     gene            7518..7823
                     /locus_tag="AABD07_000167"
     CDS             7518..7823
                     /locus_tag="AABD07_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFB2354790.1"
                     /translation="MRVSKMIGSILLVAAVQTVFSANVYECRHNGKTSYSQTPGKDCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEAVQNPKGNAQKDGSDAGIRPH"
     gene            7885..9261
                     /gene="mpl"
                     /locus_tag="AABD07_000168"
     CDS             7885..9261
                     /gene="mpl"
                     /locus_tag="AABD07_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HFB2354791.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFKVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFQADIYVIGNVARRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPN
                     SKSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIVCNGQQQSLQDTLDKGCWTPVEKFGTGHGWQIGEVNADGSFDVLLDGK
                     KAGHVAWDLMGGHNRMNALAVIAAARHAGVDVQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRVGGARILAVLEPRSNTMKLGTMKSALPASLKEADQ
                     VFCYAGGADWDVAEALAPLGCRLRVGKDFDTFVAEIVKNARTGDHILVMSNGGFGGIH
                     TKLLDALR"
     gene            9468..10520
                     /gene="bioB"
                     /locus_tag="AABD07_000169"
     CDS             9468..10520
                     /gene="bioB"
                     /locus_tag="AABD07_000169"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HFB2354792.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLELVYQAA
                     EVHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTVSVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFEPE
                     GEVAEVEKASGIKADY"
     gene            complement(10616..11827)
                     /locus_tag="AABD07_000170"
                     /pseudo
     CDS             complement(10616..11827)
                     /locus_tag="AABD07_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273249.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
     gene            complement(11875..13734)
                     /gene="ilvD"
                     /locus_tag="AABD07_000171"
     CDS             complement(11875..13734)
                     /gene="ilvD"
                     /locus_tag="AABD07_000171"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HFB2354793.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQDDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVYTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRIWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEAAVEGILGNQIVAGNIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTIEIDIPKRSIRLVISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVSQIER"
     gene            complement(13907..15672)
                     /gene="cysI"
                     /locus_tag="AABD07_000172"
                     /pseudo
     CDS             complement(13907..15672)
                     /gene="cysI"
                     /locus_tag="AABD07_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
     gene            complement(15699..17492)
                     /locus_tag="AABD07_000173"
                     /pseudo
     CDS             complement(15699..17492)
                     /locus_tag="AABD07_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
     gene            complement(17489..18571)
                     /locus_tag="AABD07_000174"
     CDS             complement(17489..18571)
                     /locus_tag="AABD07_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylate transferase"
                     /protein_id="HFB2354794.1"
                     /translation="MNYFPIFANLSGRPVLVVGGGAVAARKISLLPKAGAEVGVAAKH
                     LNAELSALAAENKILWLAKEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VGDRDHCSFIFPSVIDRDPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAGFYFPVQLVVRQDADKADGFRGYQGRIERGSVTVGQTVRIEPNGLTAEVSEIIA
                     PKGEVAQAFAGEAATIRLDRDIDVSRGDLFVDKNFPLAPQKHPEATLCWFDERPLNTA
                     RKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRINLQKPVTATPY
                     AENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(19000..19656)
                     /locus_tag="AABD07_000175"
     CDS             complement(19000..19656)
                     /locus_tag="AABD07_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase b-type cytochrome
                     subunit"
                     /protein_id="HFB2354795.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVG
                     LLVLFLLVFRLCWGIWGSDTACFSRFVRGWAGIRGYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLIRKIHLNFFKLLAVFSAVH
                     IAAVAAYRIFKKKNLVRPMITGFKYIEGKTSIRFAGKAALAAALSVAALAAAAILLLS
                     "
     gene            19721..20611
                     /locus_tag="AABD07_000176"
     CDS             19721..20611
                     /locus_tag="AABD07_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HFB2354796.1"
                     /translation="MFPVFHLSGESRRRMLQTALRFPHVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVRAGFNQDTLPFAVIAGFPEIMLDTADGLTKRQG
                     INAWTAGCGLGTDAAAVETVAAVLARNRDEAVVLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAILGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     SAGEIAPAARWLRNWITESM"
     gene            20728..22539
                     /gene="typA"
                     /locus_tag="AABD07_000177"
     CDS             20728..22539
                     /gene="typA"
                     /locus_tag="AABD07_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HFB2354797.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGCHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESSDMRPLFDTILKYTPAPSGSADEPLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
     gene            complement(22936..23026)
                     /locus_tag="AABD07_000178"
     tRNA            complement(22936..23026)
                     /locus_tag="AABD07_000178"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22990..22992),aa:Ser,seq:gga)
     gene            complement(23065..23151)
                     /locus_tag="AABD07_000179"
     tRNA            complement(23065..23151)
                     /locus_tag="AABD07_000179"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23115..23117),aa:Leu,seq:cag)
     gene            23225..25615
                     /gene="rnr"
                     /locus_tag="AABD07_000180"
     CDS             23225..25615
                     /gene="rnr"
                     /locus_tag="AABD07_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HFB2354798.1"
                     /translation="MSTVKMNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLE
                     RKGVPSKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCR
                     VEAHKDGFGFAVPLMPMDEGDFVLYERQMRGVMHGDTVTVRPAGIDRRGRREGTVLDI
                     VERAQSKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGKIEVYP
                     EQNRPAVAKIIEVLGDYADSGMEIEIAVRKHHLPHRFSEACAKSAKKIPDHVRKSDLK
                     GRVDLCDLPLVTIDGETARDFDDAVFAEKVGRNYRLVVAIADVSHYVRPDDAIDADAQ
                     ERSTSVYFPRRMIPMLPENLSNGICSLNPDVERLCMVCDMVVTYAGNIKEYRFYPAVM
                     RSHARLTYNQVWKWLSDGIGNPHKAQIDTLYKLFKILQKKRLARGAVEFESVETQMIF
                     DDNGKIEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAT
                     LREQLGLLGLQLGGGDNPSPKDYAALAEQFKGRPDAELLQVMMLRSMQQAVYEPHCEG
                     HFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNRKTYTPNKSWQALGVHTSFCERRAD
                     DAGRDVENWLKTYYMRDKVGEIFEGKISGVANFGIFVTLDDIHIDGLVHISDLGEDYF
                     NFRPEIMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAGESGRRRKVKLSAS
                     AKPAGAAGKGKSKTTAEKKTARCGKVRGRGVPAVAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(25951..27414)
                     /gene="guaB"
                     /locus_tag="AABD07_000181"
     CDS             complement(25951..27414)
                     /gene="guaB"
                     /locus_tag="AABD07_000181"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HFB2354799.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTDERVKALVEAGADVIVVDTAHGHSQGVIDRVRWVKETYPHIQVIGG
                     NIATAKAALDLVTVGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(27561..30119)
                     /gene="glnD"
                     /locus_tag="AABD07_000182"
     CDS             complement(27561..30119)
                     /gene="glnD"
                     /locus_tag="AABD07_000182"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HFB2354800.1"
                     /translation="MPENLSSALETFKQQRNAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWAEHFQNSALCLMAVGGFGRGEPYPCSDVDLAVVSPAPLSDGIQEQIARFIQTLW
                     DCKLMPSVKSGSVDELCESVRDDITGDTAFLEARFLFGNRQTADELAEKMNVQRNVAA
                     FIEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLAANLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIRLHLNAKRAEDRLLFDLQPQVAESMGYQDENRRR
                     QSEELMRVFYRAVKTVKQLGGILTPMLRSRVSSTPMRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRRRFAGF
                     FRSGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILAVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAVQGIADARQFAADHF
                     LTEEESDLLAWLVENHLLMSAVAQKEDIQDPGVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRCLAGNDGNPHALFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFEPPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAETQSCNRRISRRSRYMPIAPSITITPEEDYPDRYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERVEDSFTVFSPDLKNPKIQSSLKQALLEQLA"
     gene            complement(30168..30485)
                     /locus_tag="AABD07_000183"
     CDS             complement(30168..30485)
                     /locus_tag="AABD07_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2354801.1"
                     /translation="MGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCG
                     LDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQVPSE
                     SGI"
     gene            complement(30816..31289)
                     /gene="bfr"
                     /locus_tag="AABD07_000184"
     CDS             complement(30816..31289)
                     /gene="bfr"
                     /locus_tag="AABD07_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFB2354802.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(31317..31781)
                     /gene="bfr"
                     /locus_tag="AABD07_000185"
     CDS             complement(31317..31781)
                     /gene="bfr"
                     /locus_tag="AABD07_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFB2354803.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARSELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(32256..33239)
                     /gene="lipA"
                     /locus_tag="AABD07_000186"
     CDS             complement(32256..33239)
                     /gene="lipA"
                     /locus_tag="AABD07_000186"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HFB2354804.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFTNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(33232..33855)
                     /gene="lipB"
                     /locus_tag="AABD07_000187"
     CDS             complement(33232..33855)
                     /gene="lipB"
                     /locus_tag="AABD07_000187"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HFB2354805.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGIYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTQ
                     INPCGYAGMEMTQIADFVQPCPAPDEVASKLTAHLETQLTPKADNNE"
     gene            complement(33857..34132)
                     /locus_tag="AABD07_000188"
     CDS             complement(33857..34132)
                     /locus_tag="AABD07_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HFB2354806.1"
                     /translation="MTEQKNKASLIEFPCAFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            34317..35387
                     /locus_tag="AABD07_000189"
     CDS             34317..35387
                     /locus_tag="AABD07_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HFB2354807.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVYALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FIQNTLLPWLKNTIGGYVEIDQASIIAWFQAHTGELSNALKAWFPVLMKQGGNIVSSI
                     GNLLLPPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGELMGFVGMLAGLPLAA
                     VTLVLLREGAQKYFAGSFYRGR"
     gene            complement(35494..36441)
                     /locus_tag="AABD07_000190"
     CDS             complement(35494..36441)
                     /locus_tag="AABD07_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HFB2354808.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRAMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(36456..36863)
                     /locus_tag="AABD07_000191"
     CDS             complement(36456..36863)
                     /locus_tag="AABD07_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HFB2354809.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDTGKYAEILRYTGGNRYEVFYRGT
                     HWQAQNTGQEVFEPGTRALIVRKEGNLLIIANP"
     gene            36944..37603
                     /gene="ung"
                     /locus_tag="AABD07_000192"
     CDS             36944..37603
                     /gene="ung"
                     /locus_tag="AABD07_000192"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HFB2354810.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPEADVFNA
                     FRLTAFDRVKVVILGQDPYHGVGQAHGLAFSVRQGVRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGILLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSQHGIEPINWK
                     L"
     gene            37785..37871
                     /locus_tag="AABD07_000193"
                     /pseudo
     CDS             37785..37871
                     /locus_tag="AABD07_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
     gene            37975..38157
                     /locus_tag="AABD07_000194"
     CDS             37975..38157
                     /locus_tag="AABD07_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354811.1"
                     /translation="MGVCPDARCSAAGIARQIGNGGGIHGTLAFSLLFLSLGHIGMVA
                     YHHIKGESVLPLFLLI"
BASE COUNT         8435 a         9573 c        11019 g         9203 t
ORIGIN      
        1 attcactata taaaatcggc atttcggacg taagcaattt tgaaggcaga atgcgccatt
       61 tggaaaacaa cggctatgcg aacgttgccg ggttggaacg cctcctcgcc gtcaaaaccg
      121 acaattacaa agaaaaaaaa cctgctccat gaaattttca gcaaaagcag gataggcgat
      181 accgaattgt tcgccgtgga cgaaaacctt gtgaaacgtt tgtttttatc gcttcgcggc
      241 gaaatcgtgt tcccgaaaaa cgaaacggcg gaatcggaat ttgaaaaaag cgtccacgaa
      301 cgccggcagg aagggaatgc cgggtccggc cgcaaacaac tgcttgattt ggtacggcgc
      361 ggacaccggg aataccctta cgcgctgccc cggcttttgg cggacgcggc atcctacaag
      421 ccgaaaaaat cgaaaatccg cctttttaaa gaagcatatt cccgcaaaag cggcaggagg
      481 ctgaccgacg aaattgcaga cggcatccat atttacacct ggttttcgcg ggtaaactta
      541 gaaaaagcct attccgaata tttggaactt ttcaaatccg aatcggatgc cggaggcaga
      601 aaaccgcggt aaggtgcaaa cagataccgt acacgttgag gagcagtatg atgggcgatt
      661 ccgtcattta ttatgtagaa caggcagacg aaccggtaaa ccgtgccggc gaacgcgccc
      721 gtaaaacatt caaatacttt tggcgcgagc ttttttggga acgccgccgc attatttccg
      781 ccttggattt tgccatggtc aaagtccctt ttttccaaga cggcgaaatt tgcgaacata
      841 tgtggatcga cgatatttat tttgacggtc tttacattta cggtgtgctg aacaatgaac
      901 ccggcggact gaccaatgtc gaacaaggcg aaagcgtttg cgttccggtt ggcgacatca
      961 gcgactggat gttcgtgtgc aacggcatcc cctacggcgg ctttaccgta caggcaatgc
     1021 gcggacagat gacggaagag gagcgtaccg aacacgatac cgcctgggga atcgatttcg
     1081 gcgatcccgg gcaggtattg ccggtgtatg aagaaaaaga acatcccgaa aatttggaag
     1141 agcatccgat gtgccggaac tgtattgacg attttcggca acagttgtcc caaaatccgg
     1201 attttctgca tgagcaggac gaagacggct atacgccgct tcatcatgaa gccatggcag
     1261 gaaatgcact tatggttcaa gccatgcttg aatacggcgc aaatcctgcc tcaaagacat
     1321 cggaaggcta taccgccctc gattttgccc gcctgacggg ctggcaaaat gttgccgacc
     1381 tgctcgaacc gcgacattag gcagacagtt ttcctaaaaa cggacacaaa tactttttac
     1441 agaaagacaa taaaaatgcc caaaatcacc gtacttccac acgcaacatt atgccccgag
     1501 ggtgcagtca tcgataacgc gcccgaaggc aaaaccgtcc tcgacgtgct gctcgaccac
     1561 gacatcgaag tcgatcacgc ctgtgaaaaa tcctgcgcct gcaccacctg ccacgtgatt
     1621 atccgcaaag gtttcgacag tttggaagag ccggccgaat tggaagaaga cctgctcgat
     1681 caggcttggg gtttggaagc cgattcgcgc ctgagttgtc aggcggttgt tgccggcgag
     1741 gatttgattg tggaaatccc caaatacacc atcaaccacg cgcgcgaaga acactgaaaa
     1801 caggtcgtct gaagccgaca cgcttcagac ggcattgttg cgcggataag gcgcaattac
     1861 cgaaaaacag acgtttgtga agacggaact ttcgattcta tattgatttt tatcggtttt
     1921 ttgacggaac gacccgatac ggcatctgag gcggcttgcg tttcttcctg cccgcctgcc
     1981 ggatttgcct gtccttgcgc gaaaccgaaa gagacggcgg cgcggcggac aaggtcgaga
     2041 tagcgtcctt caagctcggg gcaggcggcg gacacgcttt ctgccgcaac cgtgaagccg
     2101 cccgaccgac tcggaaaggc gttccgcaat ctgcatgcag atgcgccaac gccgggcgcg
     2161 caacattgcc gcatcgcaac cgacagccgc tttatccaaa gcaatcagac cgcgcctgct
     2221 ccggtagtta aggcaaaccg ttactctgta gagggtatgt tgcccgtcca atatttgata
     2281 cagtttgcgt atcagcagaa tcaggcggtc aaactcctcc atctccgaca gggagtcggg
     2341 atggtcggaa gcggtataaa ccagttcgga caattttgcg gcaaacatat tgttcatcaa
     2401 tcttccttat cggttgaaac cccgctcttc agggcggtag aatcagattt gtttgggagg
     2461 ggtaactcct cccggatcag gacgacacat aaggtggtgc ttgatgtgcc gtccggcgag
     2521 ttgaaacatt cagccatcct caaggggcgg cagttttgcc gaaacatatt ctacacggct
     2581 tcaatgccgg acgataaaag gaaatttata tgaaatggac cgatacccgg cgcatcgccg
     2641 aagaactcta cgacctgcac ggcgaagcca tcgatcccaa aaccgtgcgc tttacccaac
     2701 tgcgcgacct gattatggca ttgcccgaat ttgacgacga tcccgcccgt tgcggcgaac
     2761 gcatccttga agccgtgcag caggcatgga tagacgaggc ggaataagtt tcaggaatgc
     2821 cgtctgaaat gcggcggtac gcggttcgtg cttctgtttg cagcgggaat ggttttacca
     2881 gtctcctttt ttcagcctgt ccagttggcg gcggtcgcgc ttggtcggtc tgccgtcggg
     2941 atgggcggaa gtgatgcggc tgaattggtc gagctgtttg cactcttccc tcaatgctgc
     3001 cgttttcgcg tcttcttcat acagaagccg cgcctcgggt gccgggcggc gttggtggtt
     3061 caaaccttta accttgattt tatggggaag ggaattgagc gtcaggtcga taatatcgcc
     3121 gatgtctatg gttttactgt ttttgacttt cgagccgttt acttgaaccc tacccagttc
     3181 gatatgcttt tgcgcaaggg aacgggtctt gaaaaaacgt gccgcccaaa gccatttgtc
     3241 cagccgcatg gcggaagaat cgtgcttgtc tttcatacga ttttgtttga aataattgaa
     3301 tttgtttcga gtttagcata agatacatcg ccttataact agtatatatg cactaatccg
     3361 ctgttttcca tgctgtccga acacaaaaag agggtgtgga aaagccgttt tggacaataa
     3421 attaactgcg gaatatgcac aaatagcgta tgatagcggc agaatctgtt gatgagagct
     3481 tcattttatg aaacctgttt ttttggattt tgaacaaccc atagccgaac tgaccaacaa
     3541 aatcgatgag ctgcgtttcg tccaagacga gtctgccgtc gatatttcgg acgaaataca
     3601 ccgtttgcag aaaaaaagca acgatttgac caaatcgatt ttcagcaaac tcacacccgc
     3661 tcaaatttca caggtttccc ggcatccgca gcgtccctat actttggatt acattgacgc
     3721 gctgtttacc gattttgaag agctgcacgg cgaccgccac tttgccgacg atcatgcgat
     3781 tgtcggcgga ttggcgcgtt tcaacggaca aagcgttgtg gtcgtcgggc atcagaaagg
     3841 gcgcgacacc aaagaaaaaa tccgccgcaa cttcggtatg ccccgtcctg aaggctaccg
     3901 caaagccctg cgcctgatga aaacggcgga aaaattcggc ttgcccgtca tgacctttat
     3961 cgatacgccg ggcgcgtatc ccggcatcgg cgcggaagaa cgcgggcagt cggaagccat
     4021 cggcaaaaac ctgtacgaac tgacccgact gcgcgttccc gttttgtgta ccgtcatcgg
     4081 cgaaggcggt tcgggcggtg cgttggcggt cgccgtaggc gattacgtca atatgctgca
     4141 atattcgacc tattccgtta tttcccccga aggctgtgct tcgattttgt ggaaaaccgc
     4201 cgaaaaggcg gctgatgcgg cacaggcttt gggtattact gccgaccgcc tgcaaaagct
     4261 ggacttggtc gataccgtca ttaaagagcc tttgggtggt gcgcataggg atttcgggca
     4321 aaccatgaaa aacgtaaaag ccgttttgga aaaacaactg cacgaagcgc aaagcatccc
     4381 gcttgccgat ttgctttcgc gccgtttcga ccgcattatg gcttacggca aattttcgta
     4441 acaataattc gggtagaaca agcagcaagc agtttgtctg aaactgcttg ctttttcttt
     4501 atcgggatga agccgtgctg actttagatg cgtttgagca atgcttgaag gattgttttc
     4561 ctcaaggtct gaatggaaaa aaaacagcag tggcattaag cggcggcttg gattccgtcg
     4621 ttttgctgca tctgctggtt tgtgccggga agcgggcagg atttgtgccg gaggcattgc
     4681 acatccatca cggcttgagt ccccgagccg acgattgggc ggatttctgc cggaattatt
     4741 gcgatatgct aggggtgggg ctggaaacgg ttaaggtctg cgtggaaaaa aacggtttgg
     4801 gcatcgaggc ggcggcaagg caaaagcgtt atgccgagtt tgccgaaaaa ggctttgacg
     4861 ttttggcgtt ggcgcaccac agggacgatc aaatcgaaac ctttatgctg gcagtcgcgc
     4921 gcggcggagg tttgcgcgct ttggcggcta tgcccgccgt ccgccctttg ggggaaaacg
     4981 gcattatctg gcggcctttg ctgccttttt cgcgccaaga catatgggat tatgcccgaa
     5041 aacacggttt gccgaatatc gaggatgaaa gcaataccga tacggcttat ttgcgaaacc
     5101 gcttccggca ccgtattttg cccgaacttt cggcgcagat tccccatttc gggcggcatg
     5161 tgctgaacaa tgtccgcgct ttgcaggaag atttggcttt gttggaagag gtcgtcgttc
     5221 aagactgccg ttgggtttgc ggggccggtt atttcgatac ggcgcggtgg ctgacgtttt
     5281 ccccgcgccg gaaaacccat attttgcgga attttctaaa ggaaaacggc atccccgtgc
     5341 cgaatcagaa cgcacttgcc gacattgccc gcgttttgac ggaggcaaaa accggacgtt
     5401 ggaacttgca aggctttgaa ttgcatcatt atgcaggcag gctgtttgtg tttgcgtcgg
     5461 aacagttggc aaaaccggct tttctgaaag atgggacgat aagcggaaat ctcaaaaaaa
     5521 tactgacaga acatagattt gtgttgaagc ggcatccgtt cggacttcct gaagccatgt
     5581 tggaacagga cgggattttg aggacggtag cggcatcgga tacgttggct gtcggcggca
     5641 tccataaaaa tgtgaaaaaa atccttcagg ggaaacgggt tctgcctttc ctgcgcccaa
     5701 tttggccgct cgttgccgac agcggaaacc gtccattggc gttggcaaac tgttgtgcgg
     5761 attttcaaat ctcggtttca gacggcattt tgcccgtaca tcctgacttt cccattttat
     5821 tttgataata tcgcaaacag atttcggcgg cgttcagtcg ggtattgtcc ggttgcatat
     5881 ttctaaaagg cttgtgaagt gaaacacatc agttcgacca ataatgaaca tatcagacac
     5941 ctgcaccgcc tgttgtcgca aggaaagttc agacggcagt atgcccaaac cgttttggag
     6001 ggcgtgcacc tgcttcaggt tttcctgcaa tccggcagaa agccggtcgg ggtatatatt
     6061 cccgaagcta aaatgccgtc tgaagaagtc cttaaattga cagcggtttt gccggaagac
     6121 gggatttttt ccgtttcaga cggcatattg aaaaaaatca gcagcttgag ttgtgcagac
     6181 gagatactta cactgattga tatcccattg ggcggaacct tgccggacaa aggcgactgt
     6241 gcggttttgg acggcgtgca agatccgggc aatgtcggca ccgtcttacg gagtgcggcg
     6301 gcggcagggg taggtacggt cgttttgggc aggggttgtg cggacgcgtg gtcgcccaag
     6361 gtattacgcg cgggtatggg cgcgcatttc ttgttggaca tttattcgca ggcggatttg
     6421 gaaatatggt tggcgcacta tgaagaccgt gtgtttgcca ccgcgttgcg cgaggaaaag
     6481 caggcggttt tgtacggcga agatttgtgc gaaccgacag cttgggtgtt cggcaacgaa
     6541 ggtgcgggtg tcggtaaagc agttttagac agggcggaca agtgtgtcag gataccgatg
     6601 cacgatgcaa ccgagtcttt aaatgtcgcg atggcggcga caatctgcct gtttgaacag
     6661 atgcgccaac gggcggcgta ttgaggaaga gaaatgccgt ctgaaaaaat ctattacggc
     6721 gtattgattt tcttatgtat cgcttctatg ctgctgtcac cgttttttta tgcgggtgct
     6781 ttgaagccca agaaggcggc attgcggaag gacgggcagt ggaaactcat cttatcgtcc
     6841 aatgccgtgg cggcggcggt tttgttttgg atatggtgga aatggttttg acagatattg
     6901 ctcaaaatcg tgctaatgga atccgaacaa ataaagaatt tggtaaaaaa tttgttaaat
     6961 caacggatta aagttttgtg gaaaacaaaa cagctctaag caaatagggc gtttgtcggt
     7021 aaatacggaa gagttgcggc attatcgggc atctttaaca agtagtgtcg gcttggcagg
     7081 caatcggttt ttatgggcag cttgcaaaat cgcggatata aaattgcgaa tcggttaaag
     7141 tgtggggacg ctatgaaaaa ttgcgaattt ttttatgatc cgacaagggc aatctatgat
     7201 agcggtgcag attacttaac tagggaaaaa catagattag tcgtaatcgc aaatagcgct
     7261 tgggggctat tgctgaattt accttgttat tatgacgagg ttttggaaaa gcggaaaata
     7321 ccgttcggca aacaggaaat tgatgacgat atggacaaag tgtccgccct taagcggaag
     7381 tttaaagaca tttctgaaat caaagtaggg gatggttggg aatacccgtt caattatgag
     7441 caaggaatga aagaattaga tgaagttcta ttgaaataca ttcctttttt tgaagaggaa
     7501 caataaagga gtttaatatg cgcgtatcta aaatgattgg aagtatattg cttgttgcag
     7561 cggttcagac cgtattttcg gcaaatgttt acgagtgccg ccataatggt aaaaccagtt
     7621 acagccaaac tccgggaaaa gattgtacca acgcgggttt ggggcgggat cgggtgtaca
     7681 gttcggtcag gcctgccgtg aaagacaggg cggaagacgc aggagttggc gattattcgg
     7741 acacggtgag ggacgaagcc gtccaaaatc cgaaagggaa tgcacagaaa gacggttcgg
     7801 atgccggcat cagaccgcat tgattgaaac cgaatcaacc attacggtgt tgaacaatag
     7861 aatttgaacg attagggaac tctgatgaaa cacatccaca ttatcggtat cggcggcacg
     7921 tttatgggcg ggattgccgc cattgccaaa gaagccgggt tcaaagtcag cggttgcgac
     7981 gcgaagatgt atccgccgat gagcacccag ctcgaagcct tgggcatagg cgtacacgaa
     8041 ggcttcgatg ccgcgcagtt ggaagaattt caagccgata tttacgtcat cggcaatgtc
     8101 gccaggcgcg ggatggatgt ggtcgaggcg attttgaacc gtgggctgcc ttatatttcc
     8161 ggcccgcaat ggctggctga aaacgtgctg caccatcatt gggtactcgg cgtggcaggg
     8221 acgcacggca aaacgaccac cgcgtccatg ctcgcctggg tcttggaata tgccggactc
     8281 gcgccgggct tcctcatcgg cggtgtaccg gaaaatttcg gcgtttccgc ccgcctaccg
     8341 caaacgccgc gtcaagaccc gaacagcaaa tcgccgtttt tcgtcatcga agccgacgaa
     8401 tacgacaccg cctttttcga caaacgctcc aaattcgtgc attatcgccc gcgtaccgcc
     8461 gtgttgaaca atctggaatt cgaccacgcc gacatcttcg ccgacttggg cgcgatacag
     8521 acccagttcc accacctcgt gcgcaccgta ccatccgaag gcctcatcgt ctgcaacgga
     8581 cagcagcaaa gcctgcaaga tactttggac aaaggctgct ggacgccggt ggaaaaattc
     8641 ggcaccggac acggctggca gattggtgaa gtcaatgccg acggctcgtt cgacgtattg
     8701 cttgacggca aaaaagccgg acacgtcgca tgggatttga tgggcggaca caaccgcatg
     8761 aacgcgctcg ccgtcatcgc tgccgcacgc catgccggag tcgatgttca gacggcctgc
     8821 gaagccttgg gtgcgtttaa aaacgtcaaa cgccgcatgg aaatcaaagg cacggcaaac
     8881 ggcatcaccg tttacgacga tttcgcccac cacccgaccg ccatcgaaac cacgattcaa
     8941 ggtttgcgcc aacgtgtcgg cggcgcgcgc atcctcgccg tgctcgagcc gcgttccaac
     9001 accatgaaac tcggcacgat gaagtccgcc ctgcccgcaa gcctcaaaga agccgaccaa
     9061 gtgttctgct acgccggcgg cgcggactgg gacgttgccg aagccctcgc gcctttgggc
     9121 tgcaggctgc gcgtcggtaa agatttcgat accttcgttg ccgaaattgt gaaaaacgcc
     9181 cgaaccggcg accatatttt ggtgatgagc aacggcggtt tcggcggaat acacaccaaa
     9241 ctgctggacg ctttgagata gcccgggcaa tgccgtctga aagcccttta gacggcattg
     9301 cccggctgcg cggcacaaag gcggaaaaac cgtttgcccc gtattttcaa acgcgttaca
     9361 cttgccgccg ctgttttcag ccatttgatt acccgcaacc gccgtcattg cgccggcggt
     9421 ttgcctgtca gcgtcattgc gccgctgtaa atacgaaaga acacattatg accgtatccc
     9481 ccgtcgcctt gcgccgtaag accgagtgca agcctcatcc caccgcgcgc tattggaaaa
     9541 aatgcgatgt cgaggcactt ttcggactgc cgtttttaga acttgtctat caggcggcag
     9601 aagtccaccg ccaaaatttc aacccgcgcg aaatccagct ttccacgctg ttgtccatca
     9661 aaaccggcgg ttgtcccgaa gattgcgcct actgtccgca atcagcgcac cacaacacca
     9721 atttgggcaa agagcagatg atggatgtgg atgaaatcgt cgaaaaagcc aaaatcgcca
     9781 aatcgcgcgg cgcaagccgg ttttgtatgg gcgcggcatg gcgcggcccc aaacccaaag
     9841 acgtggagac ggtttccgca atcatcaaag ccgtcaaggg cttaggtatg gaaacctgcg
     9901 gcacgttcgg tatgctcgaa gaaggtatgg cggaagactt gaaagaggcg ggcttggatt
     9961 attacaacca caacctcgac accgaccccg accgctacaa cgacatcatc cacacacgcc
    10021 ggcacgaaga ccgtatggat accttgggca aagtccgcaa cgccggtttg aaagtctgct
    10081 gcggcggcat cgtcgggatg aacgaaaccc gcgccgaacg cgccgggctg attgccagcc
    10141 tcgccaacct cgacccgcag cccgaaagcg tgccgattaa ccggttggtc aaagtggaag
    10201 gcacgccgct tgccgatgcc gaagatttgg attggaccga atttgtccgt acggtttccg
    10261 tagcgcggat tacgatgccg caaagttatg tccgcctctc ggcagggcgc agcaatatgc
    10321 ctgaagcgat gcaggcgatg tgcttcatgg cgggtgcgaa ctcgattttt tacggcgaca
    10381 agctgttgac cacaggcaat cctgatgagg acggcgatag aatcctgatg gaaaagctta
    10441 acctgtatcc cttgcagttt gagccggaag gcgaggtcgc cgaagtggaa aaagcctccg
    10501 ggattaaagc ggattattga cgattgaaaa atgccgtctg aaacttgaat gccgtctgaa
    10561 acctgaaaaa aggctttcag acggcatttg ttcggacgga atttccaata tctttttacc
    10621 ggcgcgtgat gtcgccgccg ggcgagacat ccagtccgtt cccgttgggg aagtcgctat
    10681 ggttcagata aataatccgc tcaataacag ttttttcagg gtcgattttg gggattttat
    10741 cgccgacttg agtgatgggg ataatgttgc cggaaacgaa ccgcccctgt ttgtcggtga
    10801 taattttgaa aatcggcgca atgccgctga tgccgtaggt ggcaaagttg ccgccgctgt
    10861 aagagatgaa gcggtcgtgg taaagttcga cggcgcgagt aacgtgcgcc ccctgcccga
    10921 atacgacatc cgcgccggaa tcgacggcga gccgcgcaaa ctcgacgacg ttgcccctgt
    10981 tttccccata gaagatttcg gtatcgaacg gcaggtgttc agcctgtttc ccttccgcgc
    11041 cgccgtggaa catcacaatg acgatgtcgg ttttttgttt ggttttccga atcagttttt
    11101 tgaatttggc gtaatcgttc agtttgacgg cggcaaggtt gggggcgaag gagacgaagc
    11161 cgtatctcac gccgtttttc ttcaggatgg cggtttcaaa cctgttttcg atgcccgaat
    11221 atttgatgtt caattcgtca aggttgcctg ccgttgccgt gatgccttgc gcgccgaagc
    11281 cgttgctgtg gttgtttgcg aggctgaggt agtcgaatcc cgcgtcggca aggtattgcc
    11341 cgtatgcgga gggcgttcgg aatgcatagc atattttggt ggtttgcaca ttttttcggc
    11401 gtaccgcctt cgtcaaacag cgtaccttca aggttgccga cggtaatgtc cgcatcttcc
    11461 aagacggatt cgacgtgttt caggatattg gtatcgggcg ggtaatcgac cggataattg
    11521 ctgccgagca taatgccgcc gaccccgatg atggaaacgg tatctgctgc ctttccgtca
    11581 ggcgtatcct gtccgtccgc atcgccggtg tttgaaacgg gcgcggggtt tgaaccgtca
    11641 atcggcagca cgggggattc cgttccggca ggatgcgccg aggcttgacc ccggcggttt
    11701 tcggcgcgga aacagcataa ggggcggcag gcggctcttt tacatactcg agcgcggtaa
    11761 agccgctgcc gataacgagg gccaaaattg cggaaaatac cgccatcgcc cagataaatt
    11821 tgttaataat catgccttta ctgttcagac ggcatttgcc gcacgttttg gggcttatct
    11881 ctcgatttgc gatacgtcgc gcaccgcgcc tttgtcggcg gaagtcgcca tcgcgccgta
    11941 agcccttaat gcggcggaga cgtagcggtc gcggttttcc ggtttccacg ctttgctgcc
    12001 gcgagcttcc atttcggcac ggcgtgcggc aagctcttca tcggaaatga caaggcggat
    12061 gctgcgtttg gggatgtcga tttcaatcgt atcgccttcg tgtaccaaac cgattgcgcc
    12121 gccttccgcc gcttcgggcg aggcgtgtcc gatggacaaa cctgatgtgc cgccggagaa
    12181 gcgtccgtcg gttaagaggg cgcaggcttt gcccaagcct ttggatttca ggtaggaggt
    12241 cgggtatagc atttcctgca tacccgggcc gcctttcggg ccttcgtagc ggatgatgac
    12301 gatgttgccg gcgacgattt ggttgcccaa aataccttcg acggcggctt cctggctttc
    12361 aaacacgcgc gcgcggccgg tgaatttgag gatgctctcg tccacgcctg cggtttttac
    12421 cacgcagccg cgctcggcga tgttgccgaa taagaccgcc aaaccgccgt cttgcgagta
    12481 ggcgtgtgcc acgtcgcgga tacagccttt ttcgcggtca aggtcgaggg ttttccaaat
    12541 acggttttgc gagaacgcct gagtggtgcg cacgccgccg ggagccgctt tgaaacgttc
    12601 gatggcgcgg gtgttttcgg gattggtgac gtcccatttt tcaatcgcgt ctttcagtgt
    12661 cggcgcgtgg atcgtgtaca cgtcggtgtg cagtttgccc gctttgtcaa gttctttcag
    12721 aatggcgaag atgccgccgg cgcggtgcac gtcttccata tagtagtcgt ggttgttggg
    12781 cgcggttttg cagatgcagg gcacgacgcg gcttaagcgg tcgatgtctg ccattttgaa
    12841 atccacgccc gcttcgttgg cgacggcgag caagtgcagg atggtattgg tgctgcctcc
    12901 catcgcaata tccatcgtca tggcgttttc aaacgctttt ttggtggcaa tgctgcgcgg
    12961 cagcacggtt tcgtcgtctt gctcgtaata gcgtttggtg atttcgacaa tcatacgccc
    13021 tgcttcgagg aacaattctt tgcggcctgc gtgggtcgcc aaatacgaac cgttgccggg
    13081 cagggacaga ccgagcgctt cggtcaggca gttcatcgag tttgccgtaa acatacccga
    13141 acacgagccg caggtcgggc aggcgttttg ttcgacttct tcgacttgcc ggttgctgac
    13201 attgtcgtcc gccgattcga tcatggcgtc aatcaagtcc aaacggcgtt cgggttggat
    13261 gtttgccacg ccgatgacct tgcccgcttc catcgggccg ccggagacga agatggtggg
    13321 gatgttcagg cgcatggcgg caatcagcat tcccggggtg attttgtcgc agttggaaat
    13381 gcacaccagc gcgtcggcgc agtgggcgtt gaccatatat tcgatggagt cggcaatcaa
    13441 atcgcggctg ggcagggagt acaacatacc gctgtgcccc atggcgatgc cgtcgtcgat
    13501 ggcgatggtg ttgaattctt tggcaattgc acccgctttt tcaatctcgc gggcaaccag
    13561 ctggcccata ttgtgcaggt ggacatggcc gggcacgaat tgggtgaagg agttggcaac
    13621 ggcgatgatg ggcttgccga agtcggtttc catcacgccg gtggcgcgcc acaatgcgcg
    13681 cgcgcccgcc atattgcggc cgtgggtgga ggttttggag cggtattctg gcatagtgtg
    13741 tttccttgtg cctataccgt ctgaaaggca gggctgtttc agacggcatc gggtacggtt
    13801 ttttagagtg ggaaaagggg gtattttata ccaagtatcg gaattttgcg gaatggaaac
    13861 gtgtgcggca aaaaagaaca tccccgcagg aatgcggggg acgggttcag gcgcgcgcaa
    13921 tcgggacggc tttggatgcg tcccaaaaat cgacgggcgc atccaacacg ggtttgacga
    13981 tgcccgtccg tatggcgaaa tcgccgaaac cttcgtcggt atcgcgtccc gccgcccatt
    14041 tgccgatcag gtcttccaat tcggaaagga tttccggcag ggtgatgttt tctttgtaga
    14101 ggcgggggat gcgtacgcct tcgcggtcgc cgccgatgtg gaggttgtag cgtcccacgg
    14161 ctttgccgac cagtccgatt tccgccaaca tcgcccgtcc gcagccgttc gggcagccgg
    14221 taatgcgggt aacgatgtag tcgtccgacg cgccgtgttc cgccataatc ttatccagct
    14281 cgccgatgaa gtccggcaac acgcgttcgg cttccgccat tgccagcggg caggtcggga
    14341 aggaagcgca cgacatcgca ttttcgcgca gcttgctgac accgtcgcgt atcagcccgt
    14401 atgagcgggc gagctgttcg atccgggctt tgcctccttc gggcacattt gccacgatga
    14461 ggttttggtt ggcggtgatg cggaagccgc ctttgtggat tttggcgatt tccaacacgc
    14521 cggtcagaag ctgtttcccg ccttcgtcaa ccaaacgccc gctttcgatg aaaagggtca
    14581 aatgccagtt gccgtctatg cctttcaccc ggccgatgcg gtcgccgcgc ccggtaaact
    14641 tgaacggccg tatgggtttg aacggcatac ccatacggcg ttcgacttcc gtgcggaagt
    14701 tgtccaagcc catattttga atggtgtagc gggtgcggtc gtttttgcgg tggctgcggt
    14761 tgccgaagtt gcgctgcgtg gttaccaccg cttcggcggc cttcagtgcg tgttccggag
    14821 gcacgaaacc cagttccagt gaaatgttcg gataggtttt ggtgttgccg ttgccgtgtt
    14881 ccgtcgaaag cccgccgccc gccaaaacat tgaagccggc aagctgtccg ttgccgtctg
    14941 aaacggcgac gaaatccaaa tcgttaccgt agcagtccac atcgttcaag ggcgggatga
    15001 cgactgcggt tttgaatttt cgcggcagat aggttttgcc caaaatcggc tcgccttctt
    15061 gaaggaagtc gtcggaactt tgaacttttt tgccgtccac ccacatatcc agataaccgc
    15121 gcgtgcgcgg cagcaggtgt tcggaaatct ttttcgcgta ttcgtaagcc tgccggtgca
    15181 gctcggactc gatcgggttg gaggtgcaaa gcacattgcg gttcatatcc gccgccgtag
    15241 cgatggaatc caaacccagg ctgtgcaaga ggcggggcat cgtctgcaac ttggttttcg
    15301 gcacgccgtg aaattggaag gtttgccggt tggttagccg gatggagcgg taatgactct
    15361 tttcccgggc gaatttgtcc agttctatcc actgggacgg tttgatgatc ccgccggcag
    15421 ccggcagcgc aaaagcataa atttcaaggg ctcgagtttt gcctcggtgc ggatgtcgcg
    15481 gccatcctgc tcatacatac tgtggaagcg gatgagttgg aagttgtcgc ctttgaagcc
    15541 gcccgtgagc gggtctttca aatcgtccaa aatcgtgccg cgtaaaaaat tgctttcggt
    15601 tttcaggcgt tcgttgtcgg atagcggctt ttcttgccac gccaaacctt ttgtcttggc
    15661 ctgtacggtc attttgtgtt cctcccgatt atatttaatc aataaacatc acgctgatag
    15721 cgtttttctt cgcgcagcat atccaaatat ccttctgcgc cgtcttcgtc cgaatgccct
    15781 gccccgataa tcacatccag caaggcggct tccacttctt ttgccatttt tgccgcatcg
    15841 ccgcacacat agatatgcgc gccttcctgc agccattgcc aaagtccttc cgcctgttcg
    15901 cggattttgt cctgcacata gattttttct tcctgatcgc gcgaccaggc gaagtcatat
    15961 ctgtgcagga agccgtcttt ggcaaactgc tgccattcgg tctgatagag gaagtcggcg
    16021 gcaaaatgcg gattgccgaa aatcagccag tttctgcctt ccgcattttc tgcggcacgt
    16081 tgttggacga aggcgcggaa cggtgcgacg ccggtaccgg agccgatcat cacaatcggc
    16141 ttgcggctgt cttcgggcag cctgaagccg tcgttgcgtt ccgcaaacac gcgcaccgtg
    16201 ccgtcctctt ccagccggtc ggcaaagaaa cccgatgcgc cgcccgacct ggcgcgcctt
    16261 tcgtgttcga aacgcactgc gccgacggtc aggtgcactt cgtcccccgc ttccgcctgc
    16321 gacgaggaaa tcgaatacag gcgcggcgca agcgggcgca gcaggccggc gaattgttcc
    16381 gccgtcagtt ttgccgggaa gcggtgcagc acaccggcaa tcggcgtgct ttgcacaaag
    16441 ccttgcaaaa cggcgttgtc ggcagcaata cggtcgagtt cgtcatcatc ggcgaacgtg
    16501 gcatagcctt tgacaaaggc gggggtgttt tgcgtgagtt cgaaatggga taacagtgcg
    16561 gaggcaaccg gcagggtttt tccgcccgcc tgtatttccg ttgccggatt gatgccgagc
    16621 aggtctagga tttcccagac cagtgccgga tcgttgtcaa accaaacgcc gagcgcgtcg
    16681 cccgggaggt agtgcaaatc cgaaccgctc aaatcgattt cgatgtggcg cacgtcttta
    16741 tcggattggc gggcggtgat tttctgattg gccagcaggg cggcgggaaa ggggtctgcc
    16801 ttgcagtacc tgccctccga tgccgtctga aggccggcgg ggggacgttg cctgcggcgc
    16861 gggcgttgcc cggttttttg cggcttcttc ttttaagcgc gcgacaatgc ggcctgtcca
    16921 tccgtctgcg gcggcggcaa agtccaaatc cgcatcaacg cgttcgagca ggcgttttgc
    16981 gcccaattct tcaaaacgtt tgtcgaaatc tttgcccgcc cggcagaaat tcggatagga
    17041 gctgtcgccc aaacccagta cggcaaattg gagtttgtcc aatttcgggg cttttttgca
    17101 gttcagcagt ttgtgcagca cgacggcttc ttccggcggt tcgccttcgc cctgggtgga
    17161 cgtaaccagc agcaggcggc gttcgccggc gatgtttttc gccttgtagc ctttcagttc
    17221 ggcgcgcctg acttggatgc cggcggcttt caggctgtcc gccgctttgt cggcaacgga
    17281 tttcgcattg ccggtttgcg aggcggaaag gacggttacg gaaaaaggtt ctgccgccgg
    17341 caatgccgtc tgaagcgcgg gcagccctgc ggatgccccg tttcctgctt ttgcccaagc
    17401 gtagccggac agccccgaca caggagctgc gtgatttcgg gcggcatagg cggtaatggc
    17461 ggatttgtgt tctgcatatc gtgttcactc ataaaatcat acctgccgca acagtaccgt
    17521 atgtcgcttc gtctatcagg ataaacgaac cggcggcggt gttttccgca taaggcgttg
    17581 ccgtaacggg tttttgaagg ttgatgcgga ctttggcgat gtcgttcatc tttaaggatt
    17641 ccgcgccggc ctcttgttcc agcgtgcgga catccaaaac gctttcaatt tccccgactt
    17701 ttgccggcac ggtttgcgtg ccgtgcttga gcaggtattt gcgcgcggtg ttgagcgggc
    17761 gttcgtcaaa ccagcaaagc gtggcttccg gatgtttttg cggggcgagc gggaaatttt
    17821 tatcgacaaa aagatcgccg cgcgaaacat cgatgtcgcg gtccagccgg atggttgccg
    17881 cctcgccggc aaaagcctgc gccacttccc ctttcggcgc gatgatttcg gacacttcgg
    17941 cggtcagccc gttcggttcg atgcggacgg tttgcccgac ggtgaccgaa ccgcgttcga
    18001 tgcgcccctg atagcctcgg aaaccgtcgg ccttgtcggc atcttggcgg acgaccagtt
    18061 ggacggggaa ataaaaaccg gcatcgcgcc accttcctga aatttccgcc atatcgccca
    18121 aagacggcgg cagcaaggct tccagccttt cacgcagcag gcgggcgagg acgggcgcgc
    18181 tgccggagct ggaaacggca atctgaacag ggtcgcggtc gataaccgac gggaagatga
    18241 agctgcaatg gtcacggtcg cccaccacgt tgaccggctt ttggcagctt tcggcaagat
    18301 ggaaaacgcg ccggttgagg gcttggtcgc tgcttgccgc aatgatgagg aaaaccgtgc
    18361 ggatgtgttc ggcacgaaat tctttggcaa gccacaggat tttgttttcc gccgccaacg
    18421 cggagagttc ggcattcagg tgttttgcgg caaccccgac ctctgcgccc gccttcggca
    18481 gcaggctgat tttgcgtgcg gcgaccgcgc cgccgcctac gaccaatacg gggcggccgg
    18541 agaggttggc gaaaatggga aaataattca ctggctgact cctttgctgt ttgcccgcac
    18601 cttgtttccg atacggtgcg tcgcggcatt tttgtcggaa tgcgggtcat tttaaataat
    18661 aaaaaggcat ttgttagaag ctgaaagcta tatggggggc ggctgcggat gcggcggttt
    18721 tccgttttat agcggattaa caaaaaccgg tacggcgttg ccccgccccg gctcaaaggg
    18781 aacggttccc taaggcgccc aagcaccggg cgaaccggtt ccataccatt tgtactgcct
    18841 gcggcccgcc gccttgtcct gatttttgtt aatccgctat ataacggttt tggacggaaa
    18901 aacggcctga agccgtttcg ggcattcaga ccgtttgtgc ggtggggaaa atgccgtcag
    18961 aaaggcagaa aagggcttca gacggcatga tgtcgggttt caggacagga gcaggatggc
    19021 ggctgcggca agcgcggcaa ccgataatgc ggcggcaagc gcggctttgc cggcaaagcg
    19081 gattgaggtt ttgccttcga tgtatttgaa gccggttatc atcgggcgga cgaggttttt
    19141 ctttttgaat atgcggtatg cggcgacggc ggcgatgtgg actgcggaaa aaacggcgag
    19201 cagcttgaaa aagttgaggt ggattttccg tataaggctg cccgtatgtt cggaaaccaa
    19261 atggttgagg tagccgttgg tgctgaaggt gttttcatcg gcggcaaaaa gccccgtgcc
    19321 gacttgaaat gagacggcgg ccaaaagcgc aacgaccatc agtgcgccca aggggttgtg
    19381 tccgggctgg atatgttcgg gaatgccgtt tttcagatag ccgcgtatac ctgcccaacc
    19441 tcggacgaaa cgggagaaac aggcggtatc gctgccccaa atgccccagc agaggcggaa
    19501 tacgagcagg aaaaggacga gcagcccgac gcgcgtgtgc cattgcagca tatcgccgcc
    19561 ggcttttgcg ctataccaca taaagggcag ggatgcggca agcagccagt ggaaaaggcg
    19621 ggtggggaag tcccagactt tggttttgtt tttcataatc ggtttccggc ggtagaatcg
    19681 gtttgttttc gagccttaat tttaaccgat tggaggggaa atgtttcccg ttttccatct
    19741 ttcaggcgaa agccgccgcc ggatgcttca gacggcattg cgttttcccc atgttttcaa
    19801 agcccgtgcg gaagattcgc acaaagggac tttcggcacg ctcgccgtag tcggcggatc
    19861 ggcagggatg agcggcgcgc ccgtattggc ggcatcggcg gcaatgtatc tcggctgcgg
    19921 taaggtgcgg gcaggtttca atcaggatac gctgcctttt gccgtcattg ccggttttcc
    19981 cgagattatg ttggacacgg cagacggttt gaccaagcgt caaggcataa acgcttggac
    20041 ggcgggttgc ggcttgggta cagatgcggc ggcagtggaa acggtggcgg cagtgttggc
    20101 gcggaatcga gacgaagccg tcgttttgga tgcggacgcg ctgaacatat tatcaaccga
    20161 tgccgaaacc cgaaatctgg cgcgcgggtg taaaaacctg attttaacgc cgcaccccgc
    20221 cgaagccgcg cgcctgcttg gaacgacagt tgcacaggtt caggcggatc ggacggcggc
    20281 agtaaggaag ataggggcaa ttctcggtgc aaccgtggtt ttaaaggggc acaaaacatt
    20341 ggttgccgcg tccgatacgg aaatctatgt caacgaaagc ggcaatgcgg gattggcaac
    20401 ggcgggcagt ggcgacgtat tgggcggcat catcggcagt ctgctcgcac agggcgtgcc
    20461 ggtttttgaa gccgcctgcg cgggcgcgtg gctgcacggc gcggcggcgg atgttataaa
    20521 ggaatcggca ggcattgcgg ctggactgtc ggcaggggaa atcgccccgg cggcaaggtg
    20581 gctgcgcaac tggataactg aaagtatgta agaagatgcc gtctgaaagg caagggcttc
    20641 agacggcatc ttcattttcc aaatactgtc cggtaaatcg tggtataata cgcagttatc
    20701 tcttacagtt tttgaaaaac attaattatg aaacaaatcc gcaacatcgc catcatcgca
    20761 cacgtcgacc acggcaaaac cacattggtc gaccaactgc tgcgccaatc cggcacattc
    20821 cgcgccaacc agcaggttga cgagcgcgtg atggacagca acgaccttga aaaagaacgc
    20881 ggcatcacca tcctcgccaa aaacaccgcc atcgattacg aaggctgcca catcaatatc
    20941 gtcgacacgc cgggacacgc cgacttcggc ggcgaagtgg agcgcgtttt ggggatggtg
    21001 gattgcgtcg tcttgttggt ggacgcacag gaaggtccga tgccgcaaac ccgtttcgtg
    21061 accaaaaaag ccttggcttt ggggctgaaa ccgattgtcg tcatcaacaa aatcgacaaa
    21121 ccgtccgccc gtccgagctg ggttatcgac cagactttcg agttgttcga caacttgggt
    21181 gcgaccgacg agcagttgga tttcccgatt gtttacgctt caggtttgag cggctttgcc
    21241 aagctggaag aaaccgacga gagcagcgat atgcgcccgc tgttcgacac catcctaaaa
    21301 tacacgcctg caccgagcgg cagcgcggac gagccgctgc aactgcaaat ttcccaactc
    21361 gactacgaca actacaccgg ccgcctcggt atcggtcgta tcttgaacgg acgcatcaaa
    21421 cccggccaaa ccgttgccgt gatgaaccac gagcagcaaa tcgcccaagg ccgcatcaac
    21481 cagcttttgg gtttcaaagg cttggaacgc gtgccgcttg aagaagccga agccggcgac
    21541 atcgtgatta tttccggtat cgaagacatc ggcatcggcg taaccatcac cgacaaagac
    21601 aaccccaaag gcctgccgat gttgagcgtg gacgaaccga cgctgacgat ggactttatg
    21661 gtaaacacca gcccgctcgc aggtacagaa ggcaaattcg tgaccagccg ccaaatccgc
    21721 gaccgcctgc aaaaagaatt gctgaccaac gttgccctgc gcgtggaaga caccgccgat
    21781 gccgacgtgt tccgcgtatc cgggcgcggc gaactgcacc tgacgatttt gctggaaaat
    21841 atgcgccgcg aaggctacga actcgccgtc ggcaagccgc gcgtcgtgta ccgagacatc
    21901 gacggtcaaa aatgcgaacc ttatgaaaac ctgactgtgg acgtacccga cgacaaccaa
    21961 ggcgcggtaa tggaagaact cggccgccgc cgtggcgaac tgaccaatat ggaaagcgac
    22021 ggcaacggac gcacccgcct cgaataccat attccagcgc gcggcttgat cggtttccaa
    22081 ggcgaattca tgaccctgac gcgcggcgtc gggctgatga gccacgtgtt cgacgactac
    22141 gcgcccgtca aacccgatat gcccggccgc cacaacggcg tactggtgtc ccaagagcag
    22201 ggcgaggcgg ttgcttacgc cttgtggaat cttgaagacc gcggccgtat gttcgtatcg
    22261 cccaacgaca aaatctacga aggtatgatt atcggcatcc acagccgcga caacgatttg
    22321 gtggtcaacc cgctcaaagg caaaaaactc accaatatcc gtgccagcgg taccgacgaa
    22381 gcggtgcgcc tgaccacgcc gatcaaactg acgctggaag gcgcggtcga gtttatcgac
    22441 gatgacgagc tggtggaaat cacgccgcaa tccatccgcc tgcgcaagcg ttacctgagc
    22501 gaattggaac gccgccgtca ttttaaaaag ctggattaat gtttaaatga tacgcgatgc
    22561 cgtctgaaaa atttcagacg gtatttttta ttcggacggg ctttgcggct tcttgaagct
    22621 gtttcagacg gagtttttcc tatccaatca agaaactgcc gccatttttc cagcggcata
    22681 tcgccccgtc gcgtttcggt atcgggttcg gtttcccggc agcatgtcga acaatattgt
    22741 ttgaagggat acgccttttg agtccttaca ggcttaggaa gaggataaaa cataccgcaa
    22801 aacataccat aaaaaaacgg taacggatag taatcaatgg taacgtaggg taataggttg
    22861 tagctgattt tacgcaataa aatcaatacg taagtaacaa aaaatcccaa actgtaaaag
    22921 tttgggattt gtatttggca gagaggaagg gattcgaacc ctcgatacgc tattcacgta
    22981 tacacgcttt ccaggcgtgc gacttaaacc actcatccac ctctctaatg gcggaaatta
    23041 tcctaatcgg gataatttgt tatttggtgc ccgggagaag actcgaactt ccacacccgt
    23101 gaggatacca gcacctgaag ctggcgcgtc taccaattcc gccacccggg ctttgcttta
    23161 tttgctgttt tgcggtacag tgtcctgcca caaagaagtt gctattatat agttcataaa
    23221 gagaatgtca acagtcaaaa tgaataaaaa tattaaatct ttaaatttac gggaaaaaga
    23281 cccgttttta agtcgtgaaa aacagcgtta tgaacatcct ttgcccagtc gggaatggat
    23341 aatcgaattg ttggagcgca aaggtgtgcc ttcaaaaatc gaatcgcttg cacgcgagct
    23401 gtcgattacg gaagacgagt atgtcttttt tgaacgccgt ctgaaggcga tggcgcggga
    23461 cggtcaggtt ttaatcaacc gccgaggcgc agtttgcgcg gcggacaagc tggatttggt
    23521 caaatgccgc gtcgaggcgc ataaggacgg tttcggcttc gccgtgccgc tcatgccgat
    23581 ggacgaaggg gatttcgttt tatacgaacg ccagatgcgt ggtgtcatgc acggcgacac
    23641 cgttaccgtc cgtcctgcgg gtatcgaccg caggggccgc cgcgaaggga cggttctgga
    23701 tattgtcgaa cgcgcgcaaa gcaaagttgt cggccgtttc tatatggata ggggcgtggc
    23761 gattttggag ccggaagaca agcgtctgaa ccaaagcatc gtgttggaac cggacggcgt
    23821 ggcgcgtttc aaacccgaat ccggtcaggt tatcgtcggc aaaattgagg tttatcccga
    23881 gcaaaaccgg cctgcagtgg caaaaatcat tgaagttttg ggcgattatg ccgacagcgg
    23941 gatggaaatc gaaattgccg tgcgcaagca tcatttgccg caccgattca gtgaagcgtg
    24001 tgccaaatcc gcgaaaaaaa ttcccgacca tgtacgcaaa agcgatttga aaggccgcgt
    24061 cgatttgtgc gaccttcctt tggtaacgat agacggcgaa acggcgcgcg atttcgacga
    24121 cgcggtgttt gccgaaaaag tcggacgcaa ttaccgtctg gtcgtggcga ttgcggatgt
    24181 cagccattat gtccgccctg acgatgcgat tgatgcagat gctcaagaac gcagtaccag
    24241 cgtgtatttc ccgcgccgta tgattccgat gctgccggaa aacctgtcca acggcatctg
    24301 ctcgctcaat cccgatgtcg agcgtttgtg tatggtgtgc gatatggtcg ttacctatgc
    24361 gggcaatatc aaagaatacc gcttctatcc cgccgtgatg cgctctcatg cccgcctgac
    24421 ctacaaccaa gtttggaaat ggctttcaga cggcatcggg aatccgcaca aagcccaaat
    24481 cgacacgctt tacaagctgt ttaaaatttt gcagaaaaaa cgtctggcgc gcggggcggt
    24541 ggagtttgaa agcgtcgaaa cccagatgat tttcgacgac aacggcaaaa tcgaaaaaat
    24601 tgtccccgtc gtccgcaacg atgcccacaa gctgattgaa gaatgtatgc tggcggcgaa
    24661 tgtttgcgcg gcggattttc tgttgaaaaa caaacatacg gctttgttcc gcaaccattt
    24721 gggccccacg cccgaaaaac tcgccaccct gcgcgagcag ctcggtctgt tggggcttca
    24781 acttggcggc ggcgacaacc cgtcgccgaa agactatgcc gcgcttgccg aacaattcaa
    24841 aggcaggccg gatgccgaat tgctgcaagt catgatgttg cgctccatgc agcaggcggt
    24901 ttacgaaccg cattgcgaag ggcatttcgg tttggcttat gaagcatacg cccactttac
    24961 ctcgcccatc cgccgctatc ccgacctgac cgtccaccgt gccatcaaag ccgtattgaa
    25021 ccggaaaacc tacacgccaa acaaaagctg gcaggctttg ggcgtgcata cttcgttttg
    25081 cgaacgccgt gccgacgatg ctggccgcga tgtggaaaac tggctgaaaa cttattatat
    25141 gcgcgataag gtcggtgaaa tatttgaagg caaaatctcc ggggtggcaa attttggaat
    25201 atttgtcact ttggacgata tccatatcga cggtctggta catatcagcg atttgggcga
    25261 agattatttc aacttccgcc ccgaaatcat ggcaatcgaa ggcgaacgca gcggcatccg
    25321 tttcaatatg ggggacaggg ttgccgtccg ggtcgcgcgt gccgatttgg atgatggaaa
    25381 aatcgacttt gtcctaattg ccggagaaag cggcaggcgg cggaaggtca aattatccgc
    25441 atctgccaaa ccggcagggg cggcggggaa agggaaatcg aaaaccaccg ccgagaaaaa
    25501 aacagcccga tgcggcaaag taaggggaag gggcgtgcct gccgttgccg aatcggggaa
    25561 aaaggcaaag aaaccggttc cgattaaggt caaaaaacgg aaaggcaaat cataatgctg
    25621 acggggcggc ttggggaggg cggggcatac tttcccgaag ccgccgcccg attttttgat
    25681 atggcggccg gcgcatcatt tccgaccaat cgaaacgccc gtattgaaag attgcgttta
    25741 tttccaccgc cgttttaaag gccgacggta ttcggcagac ggggtgcaaa cggcgttcag
    25801 acggcatttt cattctttcg gcgtgtccgt cagaatggct ttgcccgtcc gcgcaatcag
    25861 cccgtgcggc ttgccttgaa cgaacaaaaa tgccgtctga aactcggaaa ttaggtttca
    25921 gacggcattt gtcctgaaag gctgttcaaa tcagcggtgg taattcggcg cttctttggt
    25981 aatttgaacg tcgtgaacgt gcgattcgct catacctgcg gaagtgattt ccacaaattc
    26041 ggctttttcg tgcatttcgg caatattggc gcaacccaaa taacccatac tggaacgcag
    26101 tccgccggtc agttggtgga tgatgttcac aatcggacct ttgtagggaa cgcggccttc
    26161 gatgccttcg gggacgtatt tgtcggtgct gtcggttttg tcttggaagt agcggtcggc
    26221 agaaccttgg ctcatcgcgc ccaaggaacc cataccgcga taggatttgt acgagcggcc
    26281 ttggtagagt tcgatttcgc ccggggcttc ttccgtgccg gcaaacatac cgccgagcat
    26341 gacgctgtac gcgcctgcgg cgagggcttt ggcgatgtcg ccggagaagc ggatgccgcc
    26401 gtcggcaatc agcggaacgc ccgtgccttt gagggcttcg gcaacgttgt gaatggcggt
    26461 cagttgcggc acgcccacgc ctgccacgat acgggtggtg caaatcgatc ccggaccgat
    26521 accgactttg acggcatccg cgccgacggt gaccaaatcc aatgcggctt tggcagtggc
    26581 gatgttgccg ccgatgactt ggatgtgcgg ataggtttct ttgacccaac gcacgcggtc
    26641 gatcacgcct tggctatgac cgtgggcagt atcgacgaca atcacgtccg cgccggcttc
    26701 gaccaaggct ttgacgcgct cgtcggtgtc gccgccggtg ccgactgccg caccgacgcg
    26761 cagacggcct tcggagtctt tgttggcatt gggaaactcg gtggttttta aaatatcttt
    26821 aacggtaatc aagcctttaa gctcgtcttt ttcgttcagg accaaaacgc gttcgacttt
    26881 gtgcgtgtgc atcagttcgc gcgcttcgtc tatgcttgtg ccttcgggga cggtaaccag
    26941 acgttcgcgc ggggtcataa tggcggaaac gggcaaatcg acgcggtttt caaaacgcag
    27001 gtcgcggttg gttacgatgc cgacgacttt gccgttttca acgacgggca ggccggacat
    27061 tttgcgtttg cgctgcgcgc gcatttccaa gacttcgcgg atgagcgttg tcggcgcaac
    27121 ggttacgggg tctttgacca cgccgctttc gtggcgtttt actttggaaa cggcgcgcgc
    27181 ctgcatttcg ggcggcatgt ttttatggat gatgccgatg ccgccttcct gtgccatcga
    27241 aatggcgagg cgcgcctcgg taacggtatc catcgcggcg gaaagcaggg ggaggttgag
    27301 tgtgatttcg cgggtaagct tggtttgaag tttaacgtct cgcggcagca cggtcgaatg
    27361 tgcgggaacc aacaaaacat cgtcgaaagt ataggctttt tctacgatac gcataatgct
    27421 cggtctttcg gtttgtgcaa gatgcacggc attatagcac gttgccggcg gcttgacagt
    27481 ttatattgtt tgcaatatcc cccgccttca gacggcatac ggcgtggcgg cgggatgccg
    27541 tttgaaaacc ggcagggtgc ttatgccaac tgttccagca aagcctgttt caatgaggac
    27601 tggatttttg ggtttttcaa gtcggggctg aagacggtaa agctgtcttc gacgcgttcg
    27661 tccaacgtgg agattttggc gtagcgcagg ctgacgttgt gggcgaagaa gacttccgcc
    27721 atgtcggcga gcaggaaggg gcggttgacg gcggtgattt cgacggaata ccggtccgga
    27781 tagtcttctt cgggggtgat ggtgatgctt ggcgcaatag gcatatagcg gctgcggcgg
    27841 ctgatgcggc ggttgcagct ttgggtttcg gcaacggtgt gtccgtggat aaagctgttg
    27901 agttcggctt cgagcgcgct ttggatgtcg gggtagtctt cgggggcgtg ctgcgagggg
    27961 atttgcacga tgaaggtgtc gaggatgtag tcgtgttcgg tgataaaggc gcgggcggcg
    28021 aggatatcga agccgtggcg gctgaagatg cggcagaggc gggcgaacag gcgcgggccg
    28081 ttgggcataa agaccatcac ttgaaagctg tcgctttggg gtaggatgcg gctgcggacg
    28141 atggggggtt caaagtcgtg tacgaggttg gcggcgtgcc acaggatttc gcgggactga
    28201 tggcgggcga aataggcgga accgagcgcg ttccatagtt ttttctgctg tttttcgggg
    28261 acggcggcgc gggtaagtaa gtcggcggct tcctgccggc ggcggccgaa gagggcgtgc
    28321 gggttgccgt cgttgcctgc gaggcagcgt ccggcggcgt ggaacaggct ttccagcagg
    28381 ctggcgcgcc aggcgttcca cagcttggga ttggtgccgc gtatgtcgga aatggtcagg
    28441 aggtagagcg cgctgaggcg ttcgtgggtt tggacgcgtt tgcagaaggc atcgagtacg
    28501 ccggggtctt ggatgtcttc tttttgggcg acggcagaca taaggaggtg gttttcaacc
    28561 agccaggcga gcaggtcgct ttcttcttcg gtcaggaagt ggtcggcggc aaattggcgc
    28621 gcgtctgcga tgccttgtac ggcatggtcg ccgccgcgtc ctttggcgat gtcgtggaag
    28681 aaggcggcaa ggtagaggat gtcttgtttt tcaaaggact gcatcagcgc ggaggcgtag
    28741 ggcagctcat ggctgtgcat atccagggca aggcggcgga cgttgcggac gacggcaagg
    28801 atgtggtcgt ccacgggata gatgtggaac aagtcgtgtt gaagcaggcc gacgattttt
    28861 tcccacgcgg gcagatagcg gcccaacacg ccgtagaggt tgagaaagcg cagggtttgg
    28921 gtcagtccgt tgccgctgcg gaaaaaaccg gcgaagcggc gacggttttc agaattttgg
    28981 tagaagctgc ggttgatttt gcgcgtcgcc ccccaccatg cgcgcagggt ttgcggttcg
    29041 agcgcagtaa tgtcgttgcg ctgctgcatg atttcgacga ttttgaaaat gtgttcgggc
    29101 cgtctgaaaa aaatatcggt gtgccgcgcg gcgatttggt tgttgacttg gatgtagtcg
    29161 tcgtcaatcc gcagggtaac gcgcatcggc gtggaggaaa cgcggcttcg cagcatgggc
    29221 gtgaggatgc cgcccagttg tttgacggtt ttgaccgcac ggtaaaacac gcgcatcagt
    29281 tcttcgcttt gacggcggcg gttttcatct tgataaccca tactttcggc aacttgcggc
    29341 tgcaaatcga aaagcaggcg gtcttcggcg cgcttggcgt ttaaatgcag ccggatgcgg
    29401 atgtgggcga ggcggcggta gccgtgcgaa agcataccgg cttcggcacg tgtcaaaatc
    29461 cgctgtttga gcaggtcggg caggttggcc gccaagcctt gcgccttcgc tatccaaagc
    29521 agggtgtgga tgtcgcgcag accgcccgga cagcttttga tattcggctc caacaccgcc
    29581 cccgaacctt gcgatttggc gtggcggtgt tccatctcca ccaattttgc ttcgataaat
    29641 gccgctacat tgcgttgcac gttcattttt tccgccaatt cgtctgctgt ttggcggttg
    29701 ccaaacaaaa acctagcctc taaaaacgct gtgtcccccg taatatcgtc gcgcacgctt
    29761 tcgcacagtt cgtcaacgct gccgcttttt acagacggca ttagtttgca atcccacaga
    29821 gtttggataa atcgggcaat ctgttcctga atgccgtctg aaagcggggc aggggagaca
    29881 accgccaaat ccacatccga acagggatac ggttcgccgc gcccgaagcc gcctaccgcc
    29941 atcaggcata acgcgctgtt ttgaaaatgt tctgcccaca atgccgccag caaggtttcg
    30001 actgccgccg tgtattctct gaaaaatacc gacacgcggt tggctttcaa ataatgcgct
    30061 tcggcggcat tgcgctgctg tttgaaggtt tccagtgctg aagacaggtt ttcaggcatt
    30121 tttattcttt cgattggcgg gaaaaaggga ggcggatggt tcggcggtca aataccgctt
    30181 tcagacggca cttgtcgggt atcggcggaa ttggtcatca ggttcaaccg ttcctgcggc
    30241 ggcagcagca actgatacgc cgccacgccc aaagccgccg ccattttttc gatattcgac
    30301 agggcaatgt tccagcgttt gcgctcgact gccgacacat aagtcctgtc caaaccgcat
    30361 tgccgcgcca attcctcttg cgaccaaccc ttgttcacgc ggaaaagccg catattgtat
    30421 gccaataccg cccgcaaatc ctgttcgtca ggcaattcgg caggcagagt caatttgttg
    30481 cccatcattt gtttccggat aaatggttaa aagttaagca tttgctgtta cggattttac
    30541 ttcacataaa agccaaaaaa aaggggtggc ggcagccaca cccaaacaca cacacacatc
    30601 aagaggaaag aggtaaaatc aagacggatt gggaaacagc aaacaaacaa tctagatttc
    30661 atatcggtat tatcaaacaa aaaccgttat cgagtattga ttcaaatcaa tttagatttt
    30721 attcgtaaac cggcaaagaa aaacggcata cccgtttata cggatatgcc gtctgatgat
    30781 gcaggggact gctgtatttg gcagtggttt gtgttttagt cctcttgcgc cgctgtttgc
    30841 aggtagttcg gcaaaccgat tttgccgatc agttcctgct gggtttcgag ccagtcgatg
    30901 tgttcttcgt tagtatcttt ttgtttttcc aacaaatcac ggctgacata atcctgttgc
    30961 gcttctgctg tggcgatggc ggcaagcagg gcttcgtgtt tttcctgttc tttggtcaaa
    31021 tcgcaggcga tgatttcttc ggtagattca ccgatcagaa gcttgcccag ctcttgcaaa
    31081 ttgggcaatc cctcaaggaa gaggatgcgt tcaatcaaat cgtcggcagc tttcatttct
    31141 acgattgatt gtttgaagaa atgttcgccc agttcttcaa agccccagtt tttcaaaata
    31201 cgggcgtgaa ggaaatattg gttaatggtt accagcagca agcctaagtt tttgttcagc
    31261 tcgcggataa ccaaacggtc gcctttcata cggactcctt ttattcctaa tacggattac
    31321 agttggcttt ggtagtagtt gccttcgcca atcagctcga tcaggcgcag ctgctgttcc
    31381 aaccagtgtg cgtggtcttc ttcggtgtct ttcagttggg caaccatcag gtcgcgcgta
    31441 acatagtctt gagcctcttc gcacagtttg atgccttttt tcaaagcgtc gcgcacttcg
    31501 tattcggttt gcaggtcggc tttgaggcag gaaaccacgt ccgtgccgat attcagttcg
    31561 gagcgtgcca ttttcggcgt accgcccagc atcaggatgc gtcggatgaa gtcttcggcg
    31621 tgtgtggttt cttcttccat ctcgtgattg agacgttcaa aaagtttggt gtagccccat
    31681 tcggagtaga ggcgggagtg gatgaagtat tggtcgcgtg ccgccagctc gccggacagc
    31741 aattcgttca tgtaatcaac aacagcttga ttgccttgca taatatctct cttttcttaa
    31801 tttgggtttc gtgcggttaa acggcgttct gtaacgctgt tcgggatgcg tgcattgtat
    31861 gcaaaagctg tcggcatgac aaattttcta tttaaaatac aaacaattat caaaataaat
    31921 agggcgtatt ccccgatgcc ttccaaatca gtatgctgtt tcttatcggt tttttttgct
    31981 gctaaaacta agaatccatc tcatcaataa agaacattta cacttgttaa ccatagcaaa
    32041 aaacaaatag agcacggttt tttatcaaaa tttataatga atctttctca ttaaccgaca
    32101 gattcttttg agattatcgg attttgggaa taaattatgc cgtctgaagg actttcagac
    32161 ggcatggaca attcaaattg atgttgttta catcaaacaa ggcggcagac agcagcgtag
    32221 gaaattattt tttacttcgg aacggtgttc cgagtttaat gatgcccgca accgccgtgg
    32281 ctttcgcgta aggcttccgc cgcctgttcg tcggcatggt aacttgaacg taccatcgcg
    32341 ccgatggcgg cattggtaaa gcccagttcg tatgcttctt tttcaaatat tttgaattgt
    32401 tcgggtgtaa cgtagcgcaa gacaggcaag tgtccgtctg aaggctggag gtactgtccg
    32461 atggtaatca tctcgatatt gtgcgcccgc atatcgcgca taatttcacg cacgtcttcg
    32521 tctgtttcgc ccaagcctac cataatgccg gatttggtcg ggatatgcgg catcatttct
    32581 ttataacgtt ttaataagtc taaagaatgt tgataattgg caccgggacg ggcttttctg
    32641 tacaggctcg gatgggtttc caagttgtgg ttcatcacgt cgggcggggt ttcggcaagg
    32701 attttcagtg cgatgtccaa gcggcctcgg aagtcgggga cgaggatttc gattttggtg
    32761 ttcgggctgg tttcgcggat ggctttgatg cagtcggcga agtgttgggc gccgccgtcg
    32821 cgcaggtcgt cgcggtcaac cgaggtgatg acgacgtaac gcaggttcat ggctttgacg
    32881 gattctgcga ggtttttcgg ctcgtcgggg tcgagcatat tcggacggcc gtgtcccacg
    32941 tcgcagaacg ggcagcggcg ggtgcagatg tcgcccataa tcatgaaggt cgccgtgcct
    33001 ttgctgaagc attcgccgat gttggggcag gaggcttcct cgcaaacggt gtgcatcttt
    33061 tgttcgcgca aaatgtcttt gatttcaaag aatttgcgcg atgggagttt ggcgcgtatc
    33121 cattcgggct ttttcagttt ttcctgaagg gggacgactt tgatggggat gcgggcggtt
    33181 ttgtccgcgc ctctgagttt gatgccgcgt ttggggtcgt cggttttgat ttcactcatt
    33241 gttgtctgct ttcggtgtga gttgtgtttc aaggtgtgcg gtgagtttgg aggcgacttc
    33301 gtccggcgcg gggcagggtt ggacaaaatc cgcgatttgc gtcatttcca taccggcgta
    33361 gccgcagggg ttgatttggg taaacgggct taaatccata ttgacgttga gtgcgagtcc
    33421 gtgatagacg gaaccgtttt tgatacgcag ccccagtgag gcgattttgc gttcgccgac
    33481 gtaaatgccg gggcgtttgg gatctgccgc cgcttcgatg ccgtattccg ccaatgtggc
    33541 gatgatgctg ttttcaagcg cggaaacgat gttgcggacg ctggttttgc gccgtttgaa
    33601 atcaatcatc gtataaacga ccaattgccc gggcccgtga taggtaatct gcccgccccg
    33661 gtcgatttgg acgacgggga tgtcgtccct aatcagcagg tgctcgggtt ttcccgccag
    33721 tccttgcgta aagacgggcg ggtgttcgac gacccacaat tcgtcttcgg tgtctgcatt
    33781 ccgtccggca ttaaaggttt tcatcgcttc aaaagtcggc agatattcga ccaaaccttt
    33841 gtgtatgatt ttcatctcaa agtaccactt tgaccagttc gtgcgaagtc agcgcgcggt
    33901 agatgttgtc caattgttct tggttttcaa cctttacctg aacggtggca ccggtatagt
    33961 tgcctttgct gctcggacgc gtggtgatgt ggtgcgcctg cgtgtcgggg gcgtgaaggc
    34021 ggacggtgtc caataccgcc tgctcgaact cgggatgcac cgcgcccatc actttcaatg
    34081 ggaaggcgca gggaaattcg atgagggatg ctttgttttt ttgttcggtc atgatgtgct
    34141 gccttatcgt gtacggtatg ccgtctgaag gcgggtttgc ctttcagagg gcatcggatg
    34201 tgcagtattt tagcctaaac cacgataaca ggctatcggg aaggcggagg cttttttgac
    34261 ggcgcggcgg ttctgctata ctggcgcgca atattatttt cggaagggtg gattttatgt
    34321 atcggagaaa aggacggggc atcaagccgt ggatgggtgc cggcgcggcg tttgccgcct
    34381 tggtctggct ggtttacgcg ctcggcgata ctttgactcc gtttgcggtt gcggcggtgc
    34441 tggcgtatgt gttggaccct ttggtcgaat ggttgcagaa aaagggtttg aaccgtgcat
    34501 ccgcttcgat gtctgtgatg gtgttttcct tgattttgtt gttggcatta ttgttgatta
    34561 ttgtccctat gctggtcggg cagttcaata atttggcatc tcgcctgccc caattaatcg
    34621 gttttataca gaacacgctg ctgccgtggt tgaaaaatac aatcggcgga tatgtggaaa
    34681 tcgatcaggc atctattatt gcgtggtttc aggcgcatac gggcgagttg agcaacgcgc
    34741 ttaaggcgtg gtttcccgtt ttgatgaaac agggcggcaa tattgtcagc agtatcggca
    34801 acctgctgct gccgcccttg ctgctttact atttcctgct ggattggcag cggtggtcgt
    34861 gcggcatcgc caaactggtt ccgaggcgtt ttgccggtgc ttatacgcgc attacgggta
    34921 atttgaacga ggtattgggc gaatttttgc gcggtcagct tctggtgatg ctgattatgg
    34981 gcttggttta cggtttggga ttgatgctag tcggactgga ttcgggattt gccatcggta
    35041 tggttgccgg tattttggtg tttgtcccct atttgggtgc gtttacggga ttgctgcttg
    35101 ccactgttgc agccttgctc cagttcggtt cgtggaacgg aatcttggct gtttgggcgg
    35161 tttttgccgt cggtcagttt ctcgaaagtt ttttcattac gccgaaaatt gtaggagacc
    35221 gtatcggcct gtcgccgttt tgggttatct tttcgctgat ggcgttcgga gagctgatgg
    35281 gctttgtcgg aatgttggcc ggattgcctt tggccgccgt aaccttggtc ttgcttcgcg
    35341 agggcgcgca gaaatatttt gccggcagtt tttaccgggg caggtagacg gttccgaaac
    35401 atatttgaag cggaatacaa ccctgttcgg gtttaaataa aaataccgtc tgaaacccga
    35461 aaacagagct tcagacggta ttttcatcac ggcttatttg gcggttttgc tgctgtcgat
    35521 aattttcatg ccggcagaaa tcaggctgcc gatgtcggca acattggcgg gcataatcag
    35581 cgtattgctt tctttggcaa gattgttgaa cgcggctacg tattgttccg caatcttcag
    35641 attgaccgca tccgccccgc cttgggtttg aagggcggcg gcaatttgac ggatggcttc
    35701 ggcattggct tcggcaacaa ggcgcaggga ttccgcttcg cctttggcgc ggttgatgcg
    35761 ggcgattttc tcggcattgg acgcattgac cgcagcctga gcctcgcctt cggattgttg
    35821 gatttcggct tcacgctgac cactggcaag gttgatttgt tcgattttac ggccttcgga
    35881 ttcggcaata cgggcgcgtt tttcgcgttc ggcggtaatt tgtgcctgca ttgcgcgaag
    35941 gatttcttgc ggcggaacca aatccttgat ttcgtaacgg aggactttca caccccaagc
    36001 cccggcggct tcatcgaggg cggagacgac ggtactgttg atttcgtcgc gttcttcaaa
    36061 cgttttgtcc aactccatac gcccgataac ggaacgcagc gtcgtttggg caagctgggt
    36121 aattgccata atgtagttgc tcgaaccgta tgaggcgagt ttgggatcgg ttacttggaa
    36181 atagatgatg ccgtcaacag tcaattgcgt attatcgcgc gtgatgcaga cctggctggg
    36241 tacgtctaaa gggatttctt tcagcgaatg gcggtaggcg acgcggtcga taaagggaat
    36301 caaaatattc aaaccggccg tcagggcgcg atggaaacgc ccgagccttt cgacaacgtg
    36361 gacttcctgc tgggggatga cgacaaagga tttgaagccg aaaacggcga cggctgccaa
    36421 caagataatg aaaaattcca taattcctcc gagtgttaag ggtttgcgat gataagaagg
    36481 ttaccttctt tgcggacgat gagggcgcgc gttcccggtt caaacacttc ctgccccgta
    36541 ttttgcgcct gccagtgcgt accgcgataa aaaacttcgt aacggttgcc gcctgtgtat
    36601 cggaggattt cggcatattt tccggtatcc aaatcctgat atgaatccgt ttcaactttt
    36661 cccacggcgg ttttggcatg tacgaaccaa atgcccagcg cggaaagcag tgcggcggtc
    36721 aagacggcgg caggcgtgct gccagtcagc ccgtaggcaa tgcccgaacc cgccaaagcc
    36781 gcgctgacaa ccaaaagata aaccgttccc gtcaataatt cgatgattaa gacggcaaca
    36841 gcggcaacaa accatacagt catacatttc cccacaaagc gcgtcgtttg acaaaataac
    36901 gcaatatcag cagtatagcc gaatttgaaa ggatagggca gatatggaca cttggcacga
    36961 tgcactcggc ggcgaaaaac agcagccgta ttttcaggaa attttaaatg cggtcaggca
    37021 ggaacgtttg tcggggcaaa ttatctatcc gccggaggcc gatgtgttca acgcattccg
    37081 gctgacagcg ttcgaccggg tcaaagtcgt cattctcgga caagatccgt atcacggggt
    37141 agggcaggcg cacggtttgg cattttccgt ccggcagggt gtccgcatac cgccgtcttt
    37201 actcaatatt tacaaagaat tggaaaccga catcgaaggc ttttccattc ccgcgcacgg
    37261 ctgcctgaca gcgtgggcgg agcagggcat attgcttctg aacacggttt tgacggtgcg
    37321 tgcaggacag gcgcattcgc acgccctttt aggctgggaa cgctttaccg ataccgtcat
    37381 caggcagctt gcgacacacc gcaagcacct tgtcttcatg ttgtggggtg ggtatgcaca
    37441 acaaaaaggg aggctgatag acagtcaaaa tcatttgata ctgaccgcgc ctcatccgtc
    37501 tcctctgtcg gcatatcgcg gtttttttgg ctgccgccat ttttcacagg caaacagcta
    37561 tttgagtcaa cacggtatcg aaccgataaa ctggaagcta tgaatgccgt attcaagcgt
    37621 caaagtttgc gtgtcaggtt catttggcgg aattcgaaca gctcttgatg caatgatcgt
    37681 gttttaaggt ttcctgcaat accgcttgta aagctgcgac tgccgcaaag ccataggctg
    37741 cgggcttcac tattccgaac gctttgtgca aaagaagcaa catcatgaaa ttcaagcaat
    37801 ttattcttgc cactgttttg ggcgcgacag ccttttccgc ttgggcggac gattcatacc
    37861 aacatatccg tgcagtcaga atcctgctgc tgatattgtc tgtttggtgc gtagggtagg
    37921 gaatccgcca acgtaaaaac cgccccgcca acaccgccgt caccaaattg ggcattgggc
    37981 gtatgccctg atgctcgctg ttccgccgca ggcattgccc gtcaaatcgg caatggcgga
    38041 ggaattcacg gcacgctggc attttcattg ctgtttttgt cgctgggaca tattggaatg
    38101 gttgcctacc accacatcaa aggcgaatcc gttctgcccc tgttcttgct tatctaggtt
    38161 attgcaaaat atgagtttga aagatggata tttttgtttg cttttttatt tgttctgatt
    38221 aaatttttta
//
LOCUS       DAWXHA010000005        37423 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.005, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000005 DAWXHA010000000
VERSION     DAWXHA010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 37423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37423
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.005"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            62..541
                     /locus_tag="AABD07_000195"
     CDS             62..541
                     /locus_tag="AABD07_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HFB2354812.1"
                     /translation="MPESIFKQISSDILRLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVETGILLIEDESRNLRLSWVGSARELDRKDNAYKRALSALSRKL
                     GRCKDKLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVLQI"
     gene            complement(669..1163)
                     /gene="folK"
                     /locus_tag="AABD07_000196"
     CDS             complement(669..1163)
                     /gene="folK"
                     /locus_tag="AABD07_000196"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HFB2354813.1"
                     /translation="MNNRHFAVIALGSNLDNPAQQIRGALDALSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFINAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDPRLTLPHPRAHERSFVIRPLAEILPDFILGKYGKVVELSKRLGNQGIRL
                     LPDR"
     gene            complement(1173..1547)
                     /locus_tag="AABD07_000197"
     CDS             complement(1173..1547)
                     /locus_tag="AABD07_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HFB2354814.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRFFLLWKNPEKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLFAYIALGMVMMRARPRSTKFYTV
                     YLLAMCCIACIVYLAKTKVLPF"
     gene            complement(1601..2167)
                     /locus_tag="AABD07_000198"
                     /pseudo
     CDS             complement(1601..2167)
                     /locus_tag="AABD07_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
     gene            complement(2252..2545)
                     /gene="hfq"
                     /locus_tag="AABD07_000199"
     CDS             complement(2252..2545)
                     /gene="hfq"
                     /locus_tag="AABD07_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HFB2354815.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENKPQAAPASTLVQVETVQQPAE"
     gene            complement(2674..3612)
                     /locus_tag="AABD07_000200"
     CDS             complement(2674..3612)
                     /locus_tag="AABD07_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HFB2354816.1"
                     /translation="MSIRTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIYPADTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3932..4372
                     /locus_tag="AABD07_000201"
     CDS             3932..4372
                     /locus_tag="AABD07_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HFB2354817.1"
                     /translation="MDMKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIVREWRKVKVAGHAQEVLETLSR"
     gene            4424..5299
                     /gene="xerD"
                     /locus_tag="AABD07_000202"
     CDS             4424..5299
                     /gene="xerD"
                     /locus_tag="AABD07_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HFB2354818.1"
                     /translation="MENGLIDRLLETLWLDRRLSRNTLDSYRRDLEKIARRLSLCGRT
                     LKDADEADLAAAVYVDGEQRGSQARALSACKRLYVWMEREGMRADNPTRLLKPPKIDR
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITTLGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRSCDALFVSQKKTGISRQLA
                     WMIVKEYAGRAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVRLHSVVKEHHSRN"
     gene            5471..5671
                     /locus_tag="AABD07_000203"
     CDS             5471..5671
                     /locus_tag="AABD07_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HFB2354819.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEF
                     AASFLTAHNAQPTVTAGINVQA"
     gene            5837..6070
                     /locus_tag="AABD07_000204"
     CDS             5837..6070
                     /locus_tag="AABD07_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HFB2354820.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQDEYGFGLEVVDVDENPVLE
                     EKYNELIPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(6442..7305)
                     /gene="rfbD"
                     /locus_tag="AABD07_000205"
     CDS             complement(6442..7305)
                     /gene="rfbD"
                     /locus_tag="AABD07_000205"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HFB2354821.1"
                     /translation="MRILLTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     VFDGKGKIPHQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLSAAIIRLLQQSNPVRGIYHYAGGKSVSWYE
                     FARHIFQTALQQDASFPVPELKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
     gene            7498..8361
                     /locus_tag="AABD07_000206"
     CDS             7498..8361
                     /locus_tag="AABD07_000206"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HFB2354822.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDAPI
                     PGKGEILTQISNFWFKKLAHIMPNHFTGDTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIRLPEGMREAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECGRIIGKELAEEVRDKAVRLYTEAAEYAKSRGIIICDTKFEFGLDEEGTLTLMDE
                     VLTPDSSRFWPADQYEVGINPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIRKTVEK
                     YQEALTLLTQD"
     gene            8598..10718
                     /gene="pnp"
                     /locus_tag="AABD07_000207"
     CDS             8598..10718
                     /gene="pnp"
                     /locus_tag="AABD07_000207"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HFB2354823.1"
                     /translation="MFNKYVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVFVAV
                     TTNKEVKEGQDFFPLAVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYINGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPEVWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWNA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKISQDKIR
                     DVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEEITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPVREENAAE"
     gene            complement(10791..11459)
                     /locus_tag="AABD07_000208"
     CDS             complement(10791..11459)
                     /locus_tag="AABD07_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFB2354824.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRISSYTAIGLMLGLIGQLGISLDQTRVLQNILYTASNLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSATTGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(11456..11770)
                     /locus_tag="AABD07_000209"
     CDS             complement(11456..11770)
                     /locus_tag="AABD07_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354825.1"
                     /translation="MSRLFLLLFPWATLAACTRNIPASPAVSNCAHLHNRTVLYFDAH
                     GKPADSTAKGGFYRTVEIHDTNRILIQDFNSTGNALVKPYWSDCRKLSVFPDKHLTMS
                     HP"
     gene            11907..12758
                     /gene="dapF"
                     /locus_tag="AABD07_000210"
     CDS             11907..12758
                     /gene="dapF"
                     /locus_tag="AABD07_000210"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HFB2354826.1"
                     /translation="MKTLKFTKMHGLGNDFMVIDAVSQDFTPEDVPIAAWADRFRGVG
                     FDQLLVVGCSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     AKGIIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSRIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVVLPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            12755..13360
                     /locus_tag="AABD07_000211"
     CDS             12755..13360
                     /locus_tag="AABD07_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354827.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIALWLGISVL
                     GVKLMPGMWGMTRAAPLFIPHFYLTLGSIFFFIGYWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGVLAAMLMQVAVTAMLLAEIGR"
     gene            13556..14488
                     /gene="cysK"
                     /locus_tag="AABD07_000212"
     CDS             13556..14488
                     /gene="cysK"
                     /locus_tag="AABD07_000212"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HFB2354828.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTKGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEAAEKAGKINKNTVIVEATSGNTGIGLAMVCAARGYKLAITMPESMSKER
                     KMLLRTFGAELILTPAAEGMAGAIAKAQSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWNDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSIAKVPNEAAFETARAMAEKEGILAGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            14797..15705
                     /locus_tag="AABD07_000213"
                     /pseudo
     CDS             14797..15705
                     /locus_tag="AABD07_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
     gene            15751..15900
                     /locus_tag="AABD07_000214"
     CDS             15751..15900
                     /locus_tag="AABD07_000214"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354829.1"
                     /translation="MDWQAVKTGKTKHADNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(16336..17355)
                     /gene="lepB"
                     /locus_tag="AABD07_000215"
     CDS             complement(16336..17355)
                     /gene="lepB"
                     /locus_tag="AABD07_000215"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HFB2354830.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNVFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDIVEYRDKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIDQSGLNHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(17501..19294)
                     /gene="lepA"
                     /locus_tag="AABD07_000216"
     CDS             complement(17501..19294)
                     /gene="lepA"
                     /locus_tag="AABD07_000216"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HFB2354831.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHKG
                     RELASKMRELIPRQMFDIAVQAAIGSRIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(19436..20137)
                     /locus_tag="AABD07_000217"
     CDS             complement(19436..20137)
                     /locus_tag="AABD07_000217"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HFB2354832.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGRFSAYEGELAGK
                     RIVLALSGIGKVNAAVATAWLIRQFAPDCVINTGSAGGLGKGLKVGDVVIGTETEHHD
                     VDVTAFGYARGQVPQLPARFASDGILIETAKRAARTFEGAEVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFEEFLKTA
                     AASSAKMVAEIVKSL"
     gene            20323..21435
                     /locus_tag="AABD07_000218"
     CDS             20323..21435
                     /locus_tag="AABD07_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFB2354833.1"
                     /translation="MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPALKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGEI
                     SLQDALKNADSAHDLRLAVQLRSRRAQSSDPDLELL"
     gene            21469..22446
                     /locus_tag="AABD07_000219"
     CDS             21469..22446
                     /locus_tag="AABD07_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HFB2354834.1"
                     /translation="MIYPWHQEQWRQIAEHWTSRPNAWLFVGKKGTGKTAFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGRGSHPDFYEITPLADEPENGRKLLRIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKKVLPAPSHGEALAYLRDRGVAEPEERLAFHSGAPLFQEEGELRELRAKLLEI
                     LAEPRLLKILDYAALFDKEKLPLAVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENR"
     gene            22450..22800
                     /locus_tag="AABD07_000220"
     CDS             22450..22800
                     /locus_tag="AABD07_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilZ"
                     /protein_id="HFB2354835.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTDDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPASTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGSTISGSRPTFTM"
     gene            22805..23584
                     /locus_tag="AABD07_000221"
     CDS             22805..23584
                     /locus_tag="AABD07_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFB2354836.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     SEVFAVAEAHEHIYCTIGVHPDSKEAEEFSIAEMVEAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLAILKECKTNSGVIHCFSEDVGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRVV"
     gene            23610..23825
                     /locus_tag="AABD07_000222"
     CDS             23610..23825
                     /locus_tag="AABD07_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HFB2354837.1"
                     /translation="MKAIHPYACPRCCRLPANTFRTGMANSASKFCIAKGGRREVKKD
                     ESGGGYALCHLPDSRIVEEWEYCRSQH"
     gene            23926..24237
                     /gene="grxD"
                     /locus_tag="AABD07_000223"
     CDS             23926..24237
                     /gene="grxD"
                     /locus_tag="AABD07_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HFB2354838.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVAVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            24343..24969
                     /gene="upp"
                     /locus_tag="AABD07_000224"
     CDS             24343..24969
                     /gene="upp"
                     /locus_tag="AABD07_000224"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HFB2354839.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLTTELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPISYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKEKGCRNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSRLNENGYIIPGLGDAGDKIFGTR"
     gene            24992..25312
                     /locus_tag="AABD07_000225"
     CDS             24992..25312
                     /locus_tag="AABD07_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HFB2354840.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDAEGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLGKEAAEQGLIWFAEHVADARAHPGKHPNIDLLENVVQSGETLLLKP
                     LAAQ"
     gene            25481..26122
                     /locus_tag="AABD07_000226"
                     /pseudo
     CDS             25481..26122
                     /locus_tag="AABD07_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711434.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            26152..26976
                     /locus_tag="AABD07_000227"
     CDS             26152..26976
                     /locus_tag="AABD07_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HFB2354841.1"
                     /translation="MFALAASNMILRGDGKANLHQSSCFMTDFQDLIKNPKPETGLKR
                     PNVGFLNPPYAQSKSDAELHELYFVKEMLDMLAEGGTGIAIIPVSCVIAPSKAKSEIV
                     KYHRLKAVMSMPSELFYPVGTVTCIVVFEAHKPHFQTVVIDPDTQEEISTKKACRKTW
                     FGYWRDDGFEKTKHLGRIDLYDRWQGIKARWLEHYLNNEVHTGESVTAFVTDNDEWVA
                     EAYLETDYSKITRADFEQVVREFALFQLLGAEVGPTENLDNESYEDDDNNDFGDDE"
     gene            26976..27944
                     /locus_tag="AABD07_000228"
     CDS             26976..27944
                     /locus_tag="AABD07_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFB2354842.1"
                     /translation="MVELQEIFDVSYGSKLDLNKMSSFNPTINFVGRSGKNNGVTASV
                     DLLKNTKPYPAGLLTVALGGSVLSTFLQNKPFYTAQNVAVLNPKTEMTEQQKLFYCAA
                     IFANAYRFSACGREANRTLRQLFVPSLDEIPSWVESVNLNPSAGVTEPKLKEPLDLPV
                     VRQSKRLDEIFTIQNGIAATKLKEFEQRQKDTVVYIRPASTQARTLRSYIARDSVDEK
                     HIFPCHTLFTSTNGEGSHTYSYVSTCEFVANSDVAVLTPIQSDMPIEVKLYYAKCITA
                     NRYLFSYGRKPKGEKLKSIMLPYFDQQEDFDYICRFIHTLLFSNNL"
     gene            28226..28648
                     /locus_tag="AABD07_000229"
     CDS             28226..28648
                     /locus_tag="AABD07_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354843.1"
                     /translation="MKKMFLSAALLLSAAAQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGMGSGRRATMKFQNGEFMYTVWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPKTAQANFNDDDFSR"
     gene            28666..29430
                     /locus_tag="AABD07_000230"
     CDS             28666..29430
                     /locus_tag="AABD07_000230"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HFB2354844.1"
                     /translation="METAKPVMLIVRPSGRAKDDVEVCRRAGWQAEVLSPIEIETDEA
                     SLKRLPEMYARADAVFWVSPAAVETAVPYLNLSDGIKAHIAVGQGSRRALARYAGAGV
                     FAPEDGNDSEAVLRLPVWNSLPEGARVLSVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVQSLFAQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSYSSISVSDGMVFPGTSNQ"
     gene            29442..30776
                     /locus_tag="AABD07_000231"
     CDS             29442..30776
                     /locus_tag="AABD07_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis operon protein HemX"
                     /protein_id="HFB2354845.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAACALVLAALGLGASGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQSAIQSELDRLDSGVKANGEQILMTQKAYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFDQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVSGLPLILDGVLKPGVQARNEAVSASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNGEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKTLDVRMTADDGLKTSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKAIEAPSLPSERKPEQPAKKQPAPEKAGRSPSAKGERA"
     gene            30773..31990
                     /locus_tag="AABD07_000232"
     CDS             30773..31990
                     /locus_tag="AABD07_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HFB2354846.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVLNIPEKMQRSGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSIPARLVLAKVFDETAQSQKAEAQRNLVLA
                     SVAGENRPSAETR"
     gene            32065..33129
                     /locus_tag="AABD07_000233"
     CDS             32065..33129
                     /locus_tag="AABD07_000233"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HFB2354847.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTGLATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHESDIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLYKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGNQVALQGNFDPSALFGTPESIRTEVARILTGYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            complement(33192..35081)
                     /locus_tag="AABD07_000234"
     CDS             complement(33192..35081)
                     /locus_tag="AABD07_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFB2354848.1"
                     /translation="MLRTYLNQLTPPELADSVKNTVDGFMEKLSQTEPKIAQNVLLLG
                     NVQSGKTAQVLGVLSALADDGDHKVFLYLTTDSVDLQDQTVKRAKANLKNFIVLSEAD
                     DRSFMEVMKAENPILVVIKKNARVLKRWRNLFASQSSLKGYPLVIVDDEADAASLNTN
                     SDKPAKDASTINKLLNDIKNSCCQSLFIQLTATPQSLLLQHEESDWQPEFIHFFEAGE
                     KYIGGNFVFSDPPSYIVRFIDSELDDMKDESGEIAEGAKQALLSFLITCAEFALCDKA
                     NCNFALHPSYKIQDHQAFSKKIQAFLNDLVQAVNNGEDLAGSFKESYLDLQKTKPDIH
                     HFDEIYEKLTALLENKQISTLVVNSQTETDFDLEKGFNIIIGGNVIGRGLTIPKLQTV
                     YYSRTAKKPNADTFWQHSRIFGYDRDKSLLRLYIPFDVYYFFVQLNQANNLIIGQAKN
                     SGGNIQVIYPKNINPTRKNVLKFDSINQIVGGVNYFPLHPNEDNLSEINKILPSILKD
                     EIQSDLYQIDIEDLFLVLDKLGRYVPDDWNKEKFIAGVEALKAQRPSFKTYVLIKTGR
                     KLSRATGTMLSEDDRKLGEKYPNDLFLTLYQVVGNKDKGWQGKDFWLPNIKLPHNGLV
                     YQSAK"
     gene            complement(35082..36119)
                     /locus_tag="AABD07_000235"
     CDS             complement(35082..36119)
                     /locus_tag="AABD07_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoFVII family restriction endonuclease"
                     /protein_id="HFB2354849.1"
                     /translation="MNTVFSNIANAKITEKSLNAVWMDLFKSADEVLMATGYVSNDAV
                     VELHKILELNDHIQKIDLLVGMHYLEGFSHLQYDSLCKLNDFLRHEKRGAVYVSPFVK
                     FHGKMYSFKNYQKINGLIGSANLTCFWDSTERTYETMLHLNGKPAQILQADIQSTIHK
                     LGKNIQEVERPSKFIEHNSHLENCLGVQKIAPEQIRQLFAQTSEYHFSIPAKTEEKSN
                     LNVFFGEGRRDKRGFVKPRPWYEVELIVSKDITSQEGYPVLKSFTVITDDGWQFQCKT
                     SGDYSKNFRSENDLKTLGKWIKGRLESHGCLQNNEKITHETLREYGNDHFELRSTDNP
                     DVWLLSFKGKN"
     gene            complement(36116..37240)
                     /locus_tag="AABD07_000236"
     CDS             complement(36116..37240)
                     /locus_tag="AABD07_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2354850.1"
                     /translation="MLSKQISNLNSSSNKPKILSLFSGCGGLDLGFHQAGCETVWAND
                     FSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIILGGFPCQDFSMIWKQPGLEG
                     ERGNLYKSFLRFVNAKKPKVFVAENVKGLLTANKKKAIQQIITDFENCGYYVQAKLYN
                     FAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNETGENGLKPYVTAGQAISNIPQNA
                     SNNELLKISDKTRRMLELIPEGGNFTDIPKDHPLYVKGMISHVYRRMHRNEPSKTIIA
                     AGGGGTWGYHFPEPRAFTNRERARLQSFPDDFEFVGSTTEVRRQIGNAVPPQGVVELA
                     KSILPIFSDNYEKVDLHEKLVEEKEILFHDRLSKIRGGKQ"
BASE COUNT         9364 a         8704 c         9878 g         9477 t
ORIGIN      
        1 ggagatgtct gtataatgca gtcaatccag taaacaacgc agcagacgaa aggagggaaa
       61 aatgccggaa agtattttca aacagatttc ctccgatatt ttgaggctgc accgtgattc
      121 tgtttattcc ctgctagcaa cctcgggttg caactgtcag gtgcatgaag cggcatatgt
      181 caatattgac ggcaaatatt atattgcgct ttcgtgcgaa cccgaggtgg gggaagttga
      241 aacaggtatt ttgttgattg aagatgaaag ccgcaacctt cgtttgagct gggtcggtag
      301 tgcgagggag ctcgaccgca aggataatgc ctacaaacgc gccctgtccg cgttgtccag
      361 aaagctgggg cggtgtaagg acaagctgca tacggcggtt cagccgtttt tgttggagct
      421 ggtgccggag aaaggcagat tttctgtcgg tgatgaagaa gtttggattt ctcgaaacga
      481 tttagtgagg gccttatatc ctgtcgggta cagtatgcgg caggcagtgt tgcagattta
      541 aagttttggt agtggtttgt gttccttttg cgcccctttc tcaaggggcg attttttttg
      601 cacgcgtgtt ggcggcaaag gaaaaatgcc gtctgaaacc ggtgttcgga cggcatccgc
      661 gtgcggaatt acctgtccgg taaaagacgg atgccttgat tgcccagccg ttttgacaat
      721 tcgacaacct ttccgtattt tcccaaaata aaatcaggga ggatttctgc caaagggcgt
      781 atgacgaaac tgcgttcgtg cgcgcgcgga tgcggcaggg taaggcgggg gtcgtcgctg
      841 gagatgccgt caaagtcgat aatgtccaaa tccaatgtgc gcggtgcatt gcggaaactg
      901 cgttcgcgtc cgaaatcggc ttcgatacgg ttgagttcgg caagcagggc aatgccgtcc
      961 aaggtggtgg aaacggtgca gacggcattg atgaaatcgg gctgattgtc gtaaccgacg
     1021 ggtgcggtca tatacagtga ggaagcctgt tcaagccgga tgtcaggatg ggacgagagc
     1081 gcgtctaatg cgccgcgtat ttgttgtgcg gggttgtcaa ggttgctgcc caaggcgatg
     1141 acggcaaaat gtctgttgtt catggcagtg tttcagaatg gcaggacttt ggttttggca
     1201 aggtaaacga tgcaggcgat gcaacacata gcgagcaggt aaacggtgta gaacttggtc
     1261 gaacgcggac gggcgcgcat cattaccatg cccagtgcga tgtaggcgaa caggagcagg
     1321 atttttgtgc cgagccaagg cgcgttgaac ggggagaaat gggtaatctt catcagccac
     1381 aatcccgtaa acagcagcat cgtgtcgttg aggtggggca gtgctttcca aaagccgacc
     1441 aagggctttt ctggattttt ccaaagtagg aaaaaacgga tgttgaatac caaaatggtg
     1501 atggtaacga agatttgatg gctgtatttg acaatcagat actgcatggt cggctcgtat
     1561 caaaataagg gttagaatcg gcttatttta ccgtaaacag ttatttttga cgcagttttt
     1621 caaatgccaa aagatagggt gggctattct tccggttggt aaagccgtaa tgtaaaacgg
     1681 caaactgttc ttgaggcagg ttttttgccc attgtccgac ggcttctgcc tcctgtttgc
     1741 cgttttcgtg tcccggatag aggacggcaa taagcatacc gtcttctttc agcagggaga
     1801 gggttgctca aagggcggga atgctggttt ccttgtcggt ggtcagattc ttgtcgcctc
     1861 cgggcaacca gccgaaattg aaaacggctg catccagcgg ctccggaata tattgcttca
     1921 ggttttcatg tccgtccaag atgagccgta cattgctgta acctgcttcc tgcagacggc
     1981 atcgggtgtt gttcagggct tgcggctgga tgtcgaatgc ccacactttc cccctgttgc
     2041 ctgcggtttg tgcgaggaaa agggtgtcgt gtccgttgcc ggcggtgccg tccagcgcat
     2101 tgccgccttc gggaagtgcc tcccgcaaaa ggcaatgggc gaatggaagg atgtttttca
     2161 ataatatttt taaatgccgc ctgaaaataa aaatacctta ccgttgtccg gtaaggtatt
     2221 gaaagatatg acacgtcatg cttcgtgcgg attattcggc aggctgctgg acggtttcca
     2281 cttggacaag ggtcgaagcc ggtgcggctt ggggtttgtt ttcatgttgg aggttgacgg
     2341 agcgagccgg tacgatggtg gaaatggcgt gtttgtaaac catttgggtt acggaagtgt
     2401 ttctcagaag aacgacgtat tggtcgaaag attcgacctg accttgcaat ttgataccgt
     2461 taactaagta aatcgaaacc ggaacatgct ctttacgcaa tgcgttcagg aagggatctt
     2521 gcaacatttg tcctttagct gtcatatttt ttaactccgc tattatgatt gtgaaatcgg
     2581 gcagatgccc tgtgcgtgtc gaattgtagc ctggaatagg aaaaattacc aatttttttg
     2641 tgtttgggcg gttttccgcc gggcatttgt atgtcaggag cgttgctgca gcatccacga
     2701 ttcgattttg cgggcgtcgt tgacgcgtgt ggcggatgtg ggcgagttca gcaatacgat
     2761 ggtaacgggt tggttttgaa tgttggcttt gacaaccata gacctgcctg cctcgcggat
     2821 gtagccggtt ttctgcaatt cgatgttcca catgccttcc ctgaccaggg cattggagtt
     2881 tttatagttt tgctgcccgt ttttggtttg taccgaggcg tagttggaag tcgagttggt
     2941 gcggatttgc ggatattggg cggcggcgtt gaccatgagg ctcaggtctt tggcggtgga
     3001 aacgttttgg aagttgagtc cggtcggttc gtaaaagcgg ctgccgtaca tgcccaggct
     3061 ttgggctttg cggttcatgg cggcgacaaa tgcgcccatg ccgccggggt aggttctgcc
     3121 caatgcatgg gtggcgcggt tttcgctgct catcaggcta aggtgcagca gttctttacg
     3181 tgtaagtgcc gtacctatgg caagacggct gccggtccct ttgaggcggt cgatttcgtc
     3241 gggtgtgatg gtaacggttt cgttcatgtc caagtttgca tccaaaacga ccatcgcgct
     3301 catgagcttg gaaatggagg caatgggcat aatcctgtcg gcgtttttct gatacagtat
     3361 ttgccctgtt ttgttgttga cgaccagtgc ggattgggag gacagaatca gcccgcccgt
     3421 aatggcctgg gtatcggcgg gatatatcgt gctttcggcg aatatttcta tcggatcgga
     3481 ggaggtaagc atgttctgtt ctaaaaattg ccctaaaatg tcgttgtcgg caaaaaggtg
     3541 ggctgacggc agggaaaggc agaggccgag cagcagcgat gagggcaggc gtttcagggt
     3601 gcggatggac atttttgatt ccgtattttt gagtattggc gttattttgt tgaaaaaaca
     3661 gccatctgta aagtatgtcg tctgacagga gactgcccgt aggcgggcgg tcttgttgtg
     3721 tttttggagt tgggttttat aacattctgt ttttaaatcg gaacatattt tgtggtttga
     3781 catggatatt tttcatgccg tcgtgtgtcg gtttggatgt ttccggcggt tgaatccttg
     3841 tccttggggc ggtagaatcg gggttggttt ggcaattgcg gcggtgcgtc tgcgtgccgt
     3901 tttgaataat gggaatatcg ggagtaggac tatggatatg aaatatgaat ttaccctgcc
     3961 ttcgagcagc ggtgcggatt ttcattcggc agaacatctg cctttggtcg tgtattttta
     4021 tccgaaagac agtacgccgg gctgtacgac ggaaggcttg gattttaatg cgcgtttgga
     4081 acagtttgag gcattgggtt ataccgtggt cggtatttcc cgcgacggcg taaaggcgca
     4141 tcagaatttt tgcgccaagc agggtttccg gttcgagctg ttgagcgaca aggatgaaac
     4201 ggtgtgccgc ctgtttgatg tcatcaaatt gaaaaaactg tatgggaaag agtcgttagg
     4261 catcgagcgc agtacgttcg ttctgaacaa ggacggcgaa attgtccggg agtggcggaa
     4321 agtcaaagtg gcgggtcatg cacaggaagt gttggaaacg ctttcccgat gatgtggacc
     4381 atgccgtctg aagaagattc agacggcatt ggtttggaac gctatggaaa acggtttgat
     4441 tgacaggctg ctggaaactt tgtggttgga tcggcggctc agtcggaata ctttggacag
     4501 ctaccggcgg gatttggaaa agatcgcccg ccggctgtct ttgtgcggca gaacgctgaa
     4561 ggatgcggac gaagcagatt tggcggcggc ggtttatgtt gacggggagc aacggggttc
     4621 gcaggcacgc gcactgtcgg cgtgcaaacg cctgtatgtg tggatggaac gggaagggat
     4681 gagggcggac aatcccaccc gcctgctgaa accgccaaaa atcgacagaa acatcccgac
     4741 actgattaca gaacagcaga tttcccgact gcttgccgca ccggataccg acacgccgca
     4801 cggtttgcgg gataaggccc tgctcgaatt gatgtacgcg accggcttgc gcgtcagcga
     4861 ggcggtcggg ctgaatttcg gcaatgtgga tttggacagg ggttgtatta ccacgctggg
     4921 caagggcgac aagcagagga tggtcccgat gggacaggag tcagcgtatt gggtggaacg
     4981 ctattatacg gaggcacgcc cgcttctgct gaaaggcagg agttgcgacg cattgtttgt
     5041 cagtcagaaa aaaacgggca tttcccggca gttggcgtgg atgattgtca aagaatatgc
     5101 cggcagggca ggcatcgggc acatcagccc gcacagcctg cgccacgcct ttgccacgca
     5161 tctggtgcgg cacggattgg atttgcgcgt agttcaggat atgttgggac acgccgattt
     5221 gaacacgact cagatttata cccatgttgc caatgtgcgg ctgcatagcg tggttaagga
     5281 acaccattcc cgaaactgag gcttctgctt cggtttaata agaaatcaat cgaaaatgca
     5341 aacttgataa aaaattacca agacaaaccg tgtatgccga ccttgcaatg cgaaccgttt
     5401 ttatttatat ttgcgtacga taataaaagt cgctatcggt acgatagttt gagaacacac
     5461 ggagcacaaa atgtttgtct gcatctgcaa tgccgttacc gaccatcaaa tcaaggaaac
     5521 catcgctgcc ggcgcgacca caatgggcga tttgcagtcg caattgggcg tggcgagctg
     5581 ctgcggctgc tgcggggagt ttgccgcttc gtttctgacg gcgcacaacg cgcaaccgac
     5641 ggttacggcg ggtatcaacg ttcaagcgta aaacggtttt ggaaatgccg tctgaactgt
     5701 tcagacggca tttttgctgt ttttggcagg acttgagtat catcttcctc gaagacattg
     5761 ttttttccca aatagaccat gattctgctg cgtctaaggc tttggcgtgt gcaaattgac
     5821 agataaggaa acgcggatga aattgacctt gatgtttcgt gaatattgca gcttgtgcca
     5881 caaaatgcgc gatgcactca aaccttttca ggatgaatac gggttcgggc tggaagtggt
     5941 cgatgtggat gaaaatcctg ttttggaaga aaaatacaat gagctgattc ccgttttgtt
     6001 ggcgggagat gaggaaattt gccactggtt tttggatgag gacaggttga aacagtttct
     6061 cgaacggtaa aaaatgccgt ctgaagcagg acttcagacg gcattttttt caaatcaacg
     6121 ttctttacgt ttttgtgggg ctgatgacct gccggtaaag gaagcacgtt tggatgcctg
     6181 gtaaattgcc aatcttctac ggtgttgcat attgaccctt tctttatttt atttgtcggt
     6241 tgggagaatt cttaatttat tgattttttc aataaaaatt agaaaattta ttgtgagatg
     6301 tcattgttgg caatcatatc atgttttgct gttgatggaa gcatgattgt gtaaagatga
     6361 tatgtgtttg tgtaatcagt agattttata agaaaaccgc caaggcggtg cttggcggag
     6421 gaaacggagg ggcgggcggc atcagagcag cttggaaacg acctgtgcaa gggctttttg
     6481 ccagtctgac ggtttgatgc cgaagtcgtt ttcgattttg cggcagtcca aaatgctgta
     6541 tgcgggcctg ggggcggcag ccgcagagcc ttcatccgaa acggctttca gttcgggaac
     6601 gggaaaagag gcatcctgtt gcaatgccgt ctgaaagatg tgccgggcaa attcgtacca
     6661 ggatacggat ttgccgccgg cgtagtggta aatgccgcga acgggattgg actgctgcaa
     6721 caggcggatg atggcggcgg acaagtcgcc ggcataggtc gggcagccga tttggttgtg
     6781 gacggcggac agcggggaac gttcccgcgc aaggttcagc atcgtgcgga caaagttgtc
     6841 cccgtattcg ctaaacagcc aagaagtccg caggataagg ctgtcgggat tggcagacag
     6901 tgcgagcagt tcgccggcgg ttttggattg tccgtataca ttggaagggt tggtaaagtc
     6961 gctttcctga tggggtattt tcccttttcc gtcaaagaca tagtcggttg agatgtggat
     7021 gaatcgggca tgggcgcgat gtgctgccaa ggcaaggttg taaacggcgg aagcattgac
     7081 ggcaaatgcc gctgccgcat cgccttccgc tttgtcgacg gcagtatagg cagccgtgtt
     7141 gacaatagcg tcgggttgga aacttttgac catgttgcag acggcatcgg catcggtaat
     7201 gtctagggat gcggaatccg tcgcaatggt ttcccagtct tcaggaagac ggtcgcgcag
     7261 gcagtgtgcc agttggcttt tcgagcctgt caataggatt ctcatgaggt atttcctttg
     7321 gtgaaagtgt attgtaggac ttgctgtcgg tattatagtg ccaaaacttt gccgacggtt
     7381 gacgggttgg ctttttgtgc catgggtatt gttttgcgcc gacttcggct agaatatcgg
     7441 tttgcgattc aaacctgtcg ggtcggtatt ttcaagatat tttcaggggg gtgcgaaatg
     7501 agtgagattg gtttggtaaa gatttattcc ggaaaagtgc gcgatttata tgaaatcgac
     7561 gataaacgta tgctgatggt cgcttccgac cgcctgtccg cgtttgatgt gattttggac
     7621 gccccgattc cgggtaaggg cgaaatcctg acgcagattt ccaatttttg gtttaaaaaa
     7681 ctggcgcata ttatgcccaa ccatttcacc ggcgataccg tgtacgatgt tttgcctgaa
     7741 aacgaagcca aagctttgga aaaacgcgcc gttgtagcta aaaaactcac tccggtgaaa
     7801 gtggaggcca ttgtgcgcgg ttatctggca ggcagcggtt ggaaagatta tcaaaaaacc
     7861 ggctcggttt gcggtattcg gctgcccgaa ggtatgcggg aagcgcaaca actacccgaa
     7921 gtgattttta cgccctcaac taaagccgca gtcggcgatc acgatgaaaa catcagcttt
     7981 gaagaatgcg gacgcattat cggtaaagaa ttggcggaag aagtgcgcga caaagcggtt
     8041 cggctttaca ccgaagcggc ggaatatgcc aaatcgcgcg gcatcatcat ttgcgatacc
     8101 aaatttgaat tcggtttgga tgaagaaggt acgctgacgc tgatggatga ggtattgact
     8161 cccgattcga gccgcttctg gccggcggat caatatgaag tcggcatcaa tccgccgtct
     8221 tttgacaaac aattcgtccg cgactggctg gaacaaagcg gttggaacaa aaaagcccct
     8281 gcgcctaaag tgcctgccga tgtaattcgg aaaacggtcg agaaatatca ggaagcattg
     8341 actttactga cacaagattg attttgaaga ctgaaggccg tctgaaaagg atatgtttca
     8401 gacggccttt ttattgtatc aatactggat tttaaggatg gttgccttta taatccgcaa
     8461 ttgttttcag cgtccgaaat gccgtctgaa agcttgttta caacctgccg cacggtctga
     8521 aaccctaact atgcacattc ggattttagt gtgcattatt agtgttttag cagtgcggta
     8581 ttttgaaagg aacaatgatg ttcaataaat acgttaagac cttccaatac ggtaatcaaa
     8641 ccgttacttt ggaaaccggc gaaattgccc gccaagctgc cgctgccgtt aaagtatcga
     8701 tgggcgacac tgttgttttt gttgccgtta ccaccaacaa agaggtcaaa gaaggtcagg
     8761 acttcttccc gttggccgtc gattatttgg aacgcactta tgccgcaggc aaaatccccg
     8821 gcggcttctt caaacgcgaa ggcaaacaaa gcgaaaaaga aatcctgacc agccgtctga
     8881 tcgaccgccc gattcgtccg ctgttccccg aaggtttcta ccacgacatc caaatcgtag
     8941 cgatggttgt gtccgtcgat cccgaaatcg attccgacat tcctgcaatg ttgggcgcgt
     9001 ccgccgcgct ggtgttgagc ggcgtaccgt tcgccggccc gattggcgcg gcgcgcgtgg
     9061 gttatataaa cggcgtgtac gttttgaacc cgactaaagc cgagttggcg aaatcacaat
     9121 tggacttggt ggtcgccggt acttccaaag ccgtgttgat ggtggaatcc gaagccaaaa
     9181 tcctgcccga agacgtgatg ttgggcgcgg tggtttacgg ccacgatcaa atgcaggttg
     9241 ccatcaatgc aatcaatgaa tttgccgacg aagtgaatcc ggaagtttgg gattggaaag
     9301 cacctgaaac caatgaagaa ctggttgcca aagtacgcgg gattgccggc gaaaccatta
     9361 aagaagcgtt caaaatccgt caaaaacaag cgcgttccgc caaattggac gaggcttgga
     9421 atgcggtaaa agaagccttg attaccgaag aaaccgacac gctggcagcc aacgaaatca
     9481 aaggtatttt caaacacttg gaagccgatg tcgtccgcag ccaaattttg gacggacaac
     9541 cgcgcatcga cggccgcgac acccgcaccg tccgtccgct gaacatccaa accggcgtat
     9601 tgccgcgcac gcacggttcc gcactgttta cccgtggcga aacccaagcc cttgccgtag
     9661 cgactttggg tacttcgcgc gacgaacaaa tcatcgacgc gttgtccggc gaatataccg
     9721 accgctttat gctgcactac aactttccgc cgtactctac cggcgaagtg ggccgcatgg
     9781 gcgcgccgaa acgccgtgaa atcggtcacg gccgtttagc taaacgtgcg ttgttggccg
     9841 tattgccgaa acctgaagat ttcagctaca ccatgcgcgt ggtctccgaa attaccgaat
     9901 ccaacggctc ttcctctatg gcttctgtct gcggcggctg tttgagcctg ctgtctgccg
     9961 gcgtgccttt gaaagcacac gttgccggta tcgcgatggg tctgattttg gaaggcaata
    10021 agtttgccgt cctgaccgac attttgggcg acgaagacca cttgggcgat atggacttta
    10081 aagtggccgg tacgaccgaa ggcgttaccg cgctgcaaat ggacatcaaa atccaaggca
    10141 ttaccaaaga gattatgcaa attgctttgg cacaggccaa agaagcgcgt ttgcacatct
    10201 tggatcagat gaaagctgcc gttgcgggtc cgcaagagct gtccgcacac gcgccgcgtt
    10261 tgttcaccat gaaaatcagc caagacaaaa tccgtgatgt gattggtaaa ggcggcgaaa
    10321 ccattcgttc gattaccgct gaaaccggta ctgaaatcaa tatcgctgaa gacggtacca
    10381 tcactatcgc tgcgactact caagaagcgg gcgatgcagc gaaaaaacgc atcgaagaaa
    10441 tcactgccga agtggaagtg ggcaaagtgt acgaaggtac tgtggttaaa atcctcgaca
    10501 acaacgtcgg cgcgattgtc agcgtgatgc cgggcaaaga cggtttggta cacatcagcc
    10561 aaatcgcaca cgagcgcgta cgcaatgtcg gcgattacct gcaagtcggt caggtggtga
    10621 acgtgaaagc attggaagtg gatgacagag gccgtgtccg tctgtccatc aaagccctgc
    10681 tggatgcgcc tgtccgtgaa gaaaatgccg ccgagtaacg cttagggtga aaataccgtc
    10741 tgaacaggtt tcagacggta ttttttacgg gtatcgggaa tgaatggggc ttacagccac
    10801 aggacggcaa gcttccataa tgcccataat gatacggata atcctgtaca caggcggata
    10861 tatcggtttt gcatgatttt tttcagttgc agggaaaaaa tgccgattgc caaaagattg
    10921 ggcagcgtac ccagtgcaaa ggcaagcata tacagtccgc cggttgtcgc actaccgctt
    10981 cccagcgcgt aaagtgatgc gctgtaaacc agtccgcacg gcagccagcc ccataatatt
    11041 ccgacagcaa ggcaggcggg tatggatttt atgggcagca gccggttgag tatcgggttc
    11101 aggttgcgcc atatcggttt gccgattttc tcgatttttg ccgccaagga agaaataccg
    11161 ctcaagtata agcctaaaaa gagcagcagg aggttggagg ctgtgtataa aatattttgc
    11221 aggacgcggg tttggtcgag tgaaatgccg agttgtccga ttaatccgag catcagaccg
    11281 attgccgtat agctgcttat ccgtcctgtg ttaagcagca gaatcagcca aaagcggttg
    11341 atatgcgggg ggagttggag cgcaaacgcg ctgcttaatc cgccgcacat accgatgcag
    11401 tgagttccgc cgaagaaacc gagcaggaac agggtgagga aagtgatgtc gtggttcatg
    11461 gatggctcat ggtcagatgt ttgtcgggga aaacggacaa tttccggcag tccgaccaat
    11521 agggtttgac gagggcattc cccgtgctgt taaagtcttg aataaggatg cggtttgtgt
    11581 catgaatttc gacggtcctg taaaatccgc cctttgctgt gctgtcggcg ggtttgccgt
    11641 gtgcgtcaaa atacaggacg gtgcggttgt gaagatgcgc gcaatttgaa acggcggggc
    11701 ttgccggtat gtttcgggtg caggcggcaa gggttgccca agggaaaagc agcaggaaca
    11761 ggcgggacat tgtgtttctt gtaaggggta acaaacagta taatggctca ttttaatcct
    11821 caggcggcgg gagatggaag catttccctt cgggctcggg gatttcggat tcggaagcaa
    11881 cagacaatac gggatttcgg aacaatatga aaactttgaa atttaccaaa atgcacggtt
    11941 tgggcaacga ttttatggtg attgacgcgg tcagtcagga ttttaccccc gaggacgtgc
    12001 cgattgcggc atgggcggac cgcttccggg gcgtgggctt cgaccagctt ttggtggtcg
    12061 ggtgttcgga aaccgaaggc gtggatttcc gttaccgtat tttcaatgcc gacggtagcg
    12121 aggtcgggca atgcggcaac ggagcgcgtt gttttgcccg ttttgttgca gacaagggtt
    12181 tgaccgataa gaaagaaatt tgtgttgaaa cggccaaggg cattattttt ccgaaattgt
    12241 ccgataacgg tatggttacg gtcaatatgg gcaaaccgaa gtttatgccg tctgaaatac
    12301 cgtttgtccc cgaatcgggc gagggggatg atgcctgtat ttacggggtg catctcgaat
    12361 ccggcattca gcctgtcagc tgcgtcaata tgggcaatcc tcatgctgtg attgtagtcg
    12421 atgacgtgga atgcgcgccg gtgcgcgaaa ccggttcgcg tatcgaaccg cacaggcagt
    12481 ttcccgaacg cgtcaacgtc ggctttatgc aggttgtcgg acggacggca atccgtttgc
    12541 gcgtgttcga gcgcggcgtg ggcgaaaccc aagcgtgcgg tacgggcgcg tgtgcggctg
    12601 tggtggcggg tatccgtctg gggctgttgg atgaagggaa aacggtagag gtggttttgc
    12661 cgggcgggac tttatatatc gaatgggcct gcggcggcga tgtgatgatg accggccctg
    12721 cggaaaccgt gtttgaaggc gagttggcgt attcatgatt ttgctgcatt tggatttttt
    12781 gtctgcctta ctgtatgcgg cggtttttct gtttctgata ttccgcgcag gaatgttgca
    12841 atggttttgg gcgagtattg cgttgtggct cggcatctcg gttttagggg taaagctgat
    12901 gccggggatg tggggaatga cccgcgccgc gcctttgttc atcccccatt tttacctgac
    12961 tttgggcagc atattttttt tcatcgggta ttggaaccgg aaaacagatg gaaacggatg
    13021 gcaggcagac cccgaacatc cgctgctcgg gctttttgcc gtcagtaatg tatcgatgac
    13081 gcttgctttt gtcggaatat gtgcgttggt gcattattgc ttttcgggaa cggttcaagt
    13141 gtttgtgttt gcggcattgc tcaaacttta tgcgctgaag ccggtttatt ggttcgtgtt
    13201 gcagtttgta ttgatggcgg ttgcctatgt ccaccgctgc ggtatagacc ggcagccgcc
    13261 gtcaacgttc ggcggttcgc agctgcgact cggcgtgttg gcggcgatgt tgatgcaggt
    13321 tgcggtaacg gcgatgctgc ttgccgaaat cggcagatga ttgtgatgcc gtctgtatcg
    13381 gaacaaaaag ttataaagaa ataaattttg ggtattggtt ttttaggcgg cataggttta
    13441 ggataaagct atatccgaaa tttgtttatg gttcggcgca aatcccctgc aatcggacag
    13501 gataccgatg gggattgcgc cttactgtcg aaaccttatt attcaggagc agaagatgaa
    13561 aattgcaaac agcatcaccg aattgatcgg caacacgcct ttggtcaaac tgaaccgttt
    13621 gaccaaaggt ttgaaggcag aggttgccgt gaaactggaa ttttttaatc cgggcagcag
    13681 cgtcaaagac cgcattgccg aagcaatgat cgaggccgcc gaaaaagcgg gaaaaatcaa
    13741 caaaaacacc gtcattgtcg aagcaaccag cggcaatacg ggtatcggtt tggcaatggt
    13801 atgtgccgca cgcggctaca aactggcgat taccatgccg gaaagcatga gcaaagagcg
    13861 caaaatgctg ttgcgcacgt ttggcgcgga actgattcta acccccgccg ccgaaggtat
    13921 ggcgggcgcg attgccaaag cgcaatcctt ggtggacgct catccagaca cttattttat
    13981 gccgcgccag ttcgacaatg aggcaaatcc cgaagtccac cgcaaaacaa ccgccgagga
    14041 aatttggaac gataccgacg gtaaagtcga tgtcttcgtt gccggcgtcg gcacgggcgg
    14101 tacgattacc ggcgtgggcg aagtattgaa aaaatacaaa cccgaagtta aagtggttgc
    14161 cgtcgagcct gaggcttccc ccgtattgag cggcggcgaa aaaggtccgc acccgattca
    14221 aggtatcggc gcaggtttta ttccgaccgt tttgaatacc aaaatctacg acagcattgc
    14281 caaagtgccg aacgaagcgg cttttgaaac cgcccgtgca atggcggaaa aagaaggcat
    14341 tttggcgggc atttcttccg gtgcggcggt ttggagcgcg ttgcagcttg ccaaacagcc
    14401 tgaaaacgaa ggcaagctga tagtcgtgct gctgccttct tatggcgaac gctatctctc
    14461 tacgccactt tttgcagatt tggcataatg ctttaatcgg attgtcgaaa cattcagacg
    14521 catttttcgg tatcggtgta acgccgtgcc ggaaaatgcg tttttgcata tataccgaaa
    14581 acgccggttg tgttttaatc aggtgttggc gccgccgcat tgcttgaggg aaatattttt
    14641 tattcgggtt ttatccggca ggacggattt tgccccaacg gaaaatagcc ggcctgcccg
    14701 taaagtcagc cgtttgtccg ggcgcagccg gggctttggg cttcagacgg catattttcg
    14761 gaatggcggc acttttgccg gcggcgcggc agccatatgg ggaagggagg ggatattgtg
    14821 gtcggtaacg gaaaaaaaat atgccgcacc attgctggtg ctgggttgcg cggtgttcgg
    14881 attgggcagc ctgattgtca gatccgtccc cgtcggcccg tatgcaatcg cattttggcg
    14941 gttgctgatt tcggtattcg tattttggtt tttggcacgg tttttcggac aaaaattccc
    15001 aaaaaacaga aaaaccgtcc gatatgccct gacggcgggc gtgtttctcg ctttcgattt
    15061 ggcactttgg cacgaaagca tacacgcggt cgggccgggt atttccaccc tgctcaacag
    15121 cctgcaaatc tttttcttgt cggcaatcgg tgttttcttt ttcggcgagc gtttgggcag
    15181 gctgcaggcg gcaagcttga tgtcggcggt tgtgggcgtg gcgatgattg ccggtgcgga
    15241 attcggctac aacggtaatg cggtttgggg attcgccagc ggtttggtgt ccgggctgat
    15301 gcttgcccta tctatggtgt tcgtccgcaa gactcatgaa gtcgaacagg tggcgctttt
    15361 cccttcaatg atgattttga gtttgggcgg cgcggcatcg ccgattgttc cggcattgct
    15421 gatggacggc ggcgcacttt atccgaccac ttggaaagat tcgggtttgg tgcttgtgta
    15481 cggggcgtgg tgatgcagtg ttttgcgtgg gcgatggttg cctatgcgat tccgctgctt
    15541 tccctgtcgc tgacggggct gttgcttttg tccgaaccgg tcgccgccct gttcatcgat
    15601 tatttcggat tgggcaaaac gattgaaggc gtgcagtggg caggggtggt gctgacgctt
    15661 tcggcgattt acctcggttc gctgaaacag ccgtccgagc tttgactccg gtcggcatca
    15721 gattttctgc cgtggcaaac ctgcgtacga ttggactggc aggcagtcaa aaccggcaag
    15781 accaaacatg ccgacaacgg cgcggagcgg aaaatgccgt ctgaagccct ttcagacggt
    15841 atcggggcgg gcagaatcaa aaaagccgcc tccgcaggaa tggcaatgca actaaaataa
    15901 tgtccgtatt tccatatgcc gcccacaccg tcagtcggac gaaatgccct ttattcaatg
    15961 ggatgggttt ccacacaaac ggaaataacc ggcttttcac ttgccgacgg ataaaatcaa
    16021 ccgatgattt aaacacaggc aaatcatacg ccgcccgaac gcatcatttt tccaggcaat
    16081 ccatatgtgc cgcccatatc gataatgccg gcaaggcggt gcatatagtg gattaaattc
    16141 aaatcaggcc aaggcgacga agccgcggac agtacaaata gtacggcaag gcgaggccag
    16201 gctgtactgg tttagattta atccactata ttatccccga ggctgccggt agggaaacaa
    16261 ggcgtttgat gataaaaatg ccgtctgaaa cagggttcgg acggcatttt tgatgttccg
    16321 gcgtaatttt ccggcttaac ggattgccgt gccggccctg ccgaaatcgc cgaagttcat
    16381 caaaatgaac attgccttgc cgacaaccag cttgtcatcc acaaagcccc agtagcgcga
    16441 atcggcactg ttgtcgcggt tgtcgcccat agcgaaatag cgtccttcgg gaactttgca
    16501 cacgaaaccg ctgccgtcgt cggcatattg gcaatggttc agaccgcttt gatctatgga
    16561 atatccgttt tcagacataa tatcggaggt atatttgccc aatacgggca gggaaacggc
    16621 aggctgtcct tcttttttca gaatattgaa ggatttgccg tccagaccgc tgcggaacat
    16681 atccgtgttg tggatttcgg atgggtcggt atcgtcagga taacggtatg tgccgtcagg
    16741 aatgtcggaa gccggttttc cgtttaccgt caaaacttta tctcgatatt cgacaatgtc
    16801 gcccgggatg ccgacaatac gcttgatgta ggtcatctcc ggctgcaaag gatagttaaa
    16861 aacaacgaca tcgccccgtt cgattttgcc cgtggggatg aatacattgt ttaaaacggg
    16921 tacgcgcagg ccgtaggaaa atttgccgac caaaatgaaa tcgcccttga ttaatcccgg
    16981 gcgcatcgag ctggacggga tttggaacgg ttcggcaata aacgaccgga tgaggaacaa
    17041 taccaaaacg gtagggaaga aactgccgaa ataatcgccg aagtggctgc tttccgagat
    17101 ttcgggatga gtcttcaggc ggtatttata taccccccaa gccgtaccgc acaatacaac
    17161 gaaaatcagg aaaacggcgg taaagctcat aaacagggac aaagcggcaa acacaccgac
    17221 cgccgtcagg atataggcgt attcgaggcc ggaactccat tcaccgtttt cctgccgttt
    17281 cttgtcgctt ttgaaataaa ggatgatgcc ggcaagcagc gcggcagccg cgcccgacat
    17341 tagcattgtg ttcattgttg ttccttaacg gttaaaaacc cgcccggccg tgcaaccgtt
    17401 ttaaggcggc aaattgcaaa atttgtttgc gggcgcgtgc cgctgaaatc agggcggttt
    17461 gagaggtgtt cccgacgcgc ccgccctatg tgccgaaata ttatttgtcg ctcacctgca
    17521 aaatcgccaa gaacgcgctt tgcggaattt ccacgttgcc cacttgtttc atacggcgtt
    17581 tgcctgcttt ttgtttttca agcagttttt tcttacgcgt aatatcgccg ccgtaacatt
    17641 tcgccaaaac gtttttacgc agggctttaa cgttttctcg ggcgataatc cggctgccga
    17701 tggcggcttg gacggcgatg tcgaacattt ggcgcggaat cagttcgcgc attttcgatg
    17761 ccagctcgcg gcctttgtga accgcgcttt gacggtgtac aatcaggctt aaggcatcga
    17821 ctttttcgcc gttaaccata atgtcgagct taatcaaatc agacggttgg aattctttga
    17881 aatggtagtc caacgaagca taaccgcgcg aagtggattt gagtttgtcg aaaaagtcca
    17941 ttacgacttc gttcatcggc aagtcgtaag tcagcatcac ttggcggccc atatactgca
    18001 tattgacctg cacgccgcgc ttttggttac acaaagtcat gacgttgccg acgtattcct
    18061 gcggcacaag gatggtcgcg gtaataatcg gctcgagaat ggtttcgatg ctgccgatgt
    18121 cgggcagttt ggacgggttt tcaacttcga ttttttcgcc gcttttcaac acgacttcgt
    18181 aaaccaccgt cggcgcggtg gtaatcaaat ccatgtcgaa ctcgcgttcc aagcgttcct
    18241 gcacgatttc taaatgcagc aggcctaaga agccgcagcg gaagccgaag cccaatgctt
    18301 gagaaacttc aggctcgaat ttcaacgaag catcgttcag ctgcaatttt tccaaagcgt
    18361 cgcgcaaggc ttcgtaatcg tggctttcca caggatagag acccgcaaat acttggcttt
    18421 gtacttcttg gaaaccgggc agcggctcag tggcagggtt ggcaaccaaa gtaaccgtat
    18481 cgccgacttt cgcctgtccc aattctttca cgccggtaat caaaaaaccc acttcgccgg
    18541 cttttagttc ttgtttttga accgatttcg gtgtgaatac gcccagctgc tcgacctgcg
    18601 tttccgcctt ggtgctcata aagcgcactt tgtctttcag tttgatggtg ccgtttttca
    18661 ctcgaatcag catgaccacg ccgacgtaat tgtcaaacca cgaatcgacg ataacggctt
    18721 gcagcggcgc gttttcgtcg ccggtcggcg cagggatttt ggcaacgatt tcttccaaaa
    18781 cgtcttccac gccgatgccg cttttggctg aacactgcac cgcgccgacg gcatcgatgc
    18841 cgatgatgtc ttcgatttcc tgttccacac gctcggggtc ggcggcgggc aggtcgattt
    18901 tgttcaaaac gggcacgact tccacgccca aatcaatcgc ggtatagcag ttcgccacgg
    18961 tttgcgcttc cacgccctgc gacgcgtcaa cgaccaaaag cgcgccttcg caagccgaca
    19021 gcgaacggga aacttcgtaa gagaagtcga cgtgtcccgg cgtgtcaatc aaattaagct
    19081 gatacacctg cccgtcgcgt gctttgtagt tgagtgcggc ggtttgcgct ttgatggtga
    19141 tgccgcgctc tttttcgatg tccatggaat cgagcacctg cgtactcatt tcgcgcaaat
    19201 ccaaaccgcc gcaatattgg atgaagcggt cggcaagcgt cgatttgccg tggtcgatgt
    19261 gggcgatgat ggagaaattt cggatatttt tcattgagtt gtttttaatg ctgaacggta
    19321 ggttttagaa atgccgtctg aacaaacagc ggtacgtccg aatatcgggc gcaacgtgga
    19381 aatagcccga tattctaacg gaaaaccgct gttttggcat gatttgataa aggttttata
    19441 aagatttgac gatttctgcc accatttttg cagaacttgc cgccgccgtt ttcaaaaact
    19501 cttcaaagct gatgtctgcc ttttcgtccg ccgaatcgga aacagcgcgg atgatgacga
    19561 acggcgtttc caactgatga caggtttggg caatcgccgc cgcttccatt tccactgctt
    19621 tgacttcggg gaagtgcttg cggatttccg ccacgccttc gctgctgtgg acgaagcggt
    19681 cgccgctgac aatcaggcct tgttctacct ccgcgccttc aaacgtccgc gccgcccgtt
    19741 ttgccgtttc aatcaatatg ccgtctgaag cgaaccttgc cggcagttgc ggcacttgcc
    19801 cccgggcata gccgaatgcg gttacatcga catcgtggtg ctcggtttcc gtgccgatca
    19861 ccacgtcgcc gactttcaaa cccttgccca aaccgcctgc gctgccggtg ttgatgacgc
    19921 agtccggtgc gaattgacgg ataagccaag ccgttgcaac cgccgcgttg accttgccga
    19981 tgccgctcaa tgcaagcact atgcgttttc ccgccaattc gccttcatag gcggaaaatc
    20041 tgccgaaaga gacggctttg acattttcca tcatctcgcg caaaagctcg atttcctgtt
    20101 ccatcgcgcc gataacggct actgttttca aagacatatt gctaacctgc tgtgaatttc
    20161 ggatagaacg ccgaattata cacgctaaca cggcaggatt gagtggaggc ggtttgtccg
    20221 tgccgtctga aacggtttca gacagcacgg cggatttttg gtagaatggg aaggtacaga
    20281 ttgtttgaag attgggggac gaggatgttt accgatgaaa atatgactgc aaaggaagaa
    20341 ctgttcgcat ggctgcgcca tatgaacaaa aacaaaggtt ccgacctgtt tgtgacgacc
    20401 catttcccgc ccgctatgaa gctggacggc aaaatcaccc gcatcacgga cgaaccgctg
    20461 acggcggaaa aatgtatgga aatcgccttt tcgattatga gtgcgaagca ggcggaagaa
    20521 ttttcatcga ccaacgagtg caacttcgcc atcagcctgc cggacaccag ccgcttccgc
    20581 gtcaatgcga tgatacagcg cggtgcgacg gcgttggtat tccgcgcgat taccagcaag
    20641 attcccaagt ttgaaagcct gaacctgccg ccggccttga aggatgttgc gctgaaaaaa
    20701 cgcgggctgg ttatttttgt cggcggcacc ggctcgggca aatcgacttc gctcgcctcg
    20761 cttatcgact accgcaatga aaattcgttc ggacacatca tcaccatcga agatccgatc
    20821 gagtttgtcc acgaacacaa aaactgcatc attacccagc gcgaggtcgg cgtggacacg
    20881 gaaaactgga tggcggcgtt gaaaaatacg ctgcgtcagg cgccggatgt gatccttatc
    20941 ggcgaaatcc gcgaccgtga aacaatggac tacgccatcg cctttgccga aacggggcat
    21001 ttgtgtatgg cgacgctgca cgccaacagc accaatcagg cgctcgaccg catcatcaac
    21061 ttcttccccg aggagcggcg cgaacaattg ctgacggatt tgtcgctcaa ccttcaggcg
    21121 tttatttcgc aacgcctcgt tccgcgagac ggcggcaagg gcagggtggc ggcagtcgag
    21181 gtactgctca attcgcccct gatttcggag ttgattcaca acggcaacat ccatgaaatc
    21241 aaagaagtga tgaaaaaatc cactaccctg ggtatgcaga ccttcgacca acacctttac
    21301 caattgtatg aaaaaggcga gatttccttg caggatgcct tgaaaaatgc cgattccgca
    21361 catgatttgc gtttggcggt acagttgcgc agccgcaggg cacaaagttc cgaccccgat
    21421 ttggaactgc tctgatggcg gtatggattt ccggacgggc agtttgacat gatttatccg
    21481 tggcatcagg aacaatggcg gcagattgcc gagcattgga cgagccgtcc taatgcgtgg
    21541 ctgtttgttg gcaaaaaggg gacggggaag actgcgtttg cccgctttgc ggcgaaggcg
    21601 ctgttgtgcg aaacccctgc accgggctgc aaaccctgtg gcgaatgtat gtcctgccat
    21661 ctgtttggac ggggaagcca tcccgatttt tacgaaatca cgcctctggc ggacgaaccc
    21721 gaaaacggac gcaaactgtt gcggatcaaa atcgatgccg tcagggaaat catcgataat
    21781 gtgtacctga cttcggtacg gggcggtttg cgcgtgatcc tgattcatcc tgcggaaagt
    21841 atgaatgtcc aagccgccaa cagtttgttg aaagtgttgg aagagccgcc gccacaagtg
    21901 gtctttttgc tggtaagcca cgcggcggac aaggttttac cgaccattaa aagccgctgc
    21961 cggaagaagg ttttgcccgc tccttcgcat ggggaagcat tggcgtatct gcgcgacagg
    22021 ggtgtggcgg agcctgagga acgtctggct ttccattcgg gcgcgccgct gtttcaggag
    22081 gaaggcgagc ttcgggaatt gagggcaaag ctgctggaga tattggcaga gccgagattg
    22141 ttgaagattt tggattacgc cgcgcttttc gataaggaaa aacttccgct cgccgtattt
    22201 gtcgggtgga tgcagaaatg gctggtcgat ttaggcttgt gcctgcaaca catgaaaccc
    22261 gtctattatc ccgcttatga agacaggctg cttcagacgg catcgggttt ccgtccgcgc
    22321 aatgtatttg cggcggagga tatgctcaaa cagcttgccc cttacgggtt tcatacttta
    22381 aatgtcaaaa tgcagatcga gcatctgctc atcaactatt tggaattgaa gaaagagaac
    22441 aggtgaatta tgtcagacgg acaaaatatt ccggcaaaaa tgatgtcgtt gcagctgaaa
    22501 gacatgaatc tgctgtacag ctcctatatg ccgtttttgg aacacggcgg tctgtttgtg
    22561 cagaccgacg acgtattttc catcggggac gatattctgc ttgccgtaga aatcctcaac
    22621 ttccccaaac tgttcctgcc gaccaaggtc gcctggatta atcctgcgag tacttcctcc
    22681 aaacccaaag gggtggggct ggcattcaca aaacacgaaa actgcctgaa agtcaaagac
    22741 cagatcgaag tcgaactggg cagcacaatc agcggcagca gacctacgtt taccatgtaa
    22801 cgctatgcat atcatcgatt cgcactgcca cctcaatttt gaaggtttga aagaacgcct
    22861 gcccgaagtt ttgtccaaca tggaagcaaa cggcgtgggg caggcactcg ccatcagcgt
    22921 cagtagggaa agcttctccg aagtctttgc cgtcgccgaa gcgcacgaac acatctattg
    22981 caccataggc gtacatcccg acagcaagga agccgaagaa ttttccattg cggaaatggt
    23041 cgaagccgcc gcccatccga aagtggtcgg catcggcgag acgggtttgg attattactg
    23101 gtgcaaaggc gatttgtctt ggcagcacaa acgctttgca gaccacatcg aagcagccaa
    23161 tcaaaccgga ctgcccgtta tcgtccatac gcgcgatgcg gcggcggaca ccttggcgat
    23221 tttaaaagaa tgtaaaacca attcgggtgt gattcactgt ttttccgagg atgtcggttt
    23281 tgcccgggct gccatggatt tggggcttta tatttctttc tcgggaatcg ttacctttaa
    23341 aaacgccccc ttggttcagg aggcggcgaa atacgttccg gacgaccgca ttttagtgga
    23401 aaccgatgcg ccgttccttg cccccgttcc caaacgaggc aggcagaacg aaccggcttt
    23461 tgtgcgtcat actgccgaac atattgccaa attgcggaat caaacattgg aacaggttgc
    23521 ggcatatacg acggaaaact tttaccggct gtttaaaaaa gtacccgata tgcgggtcgt
    23581 ctgaccctgt gccgacgata aggaaaacca tgaaggcaat tcatccgtat gcatgtccgc
    23641 gctgctgccg gctgcctgcc aacacgtttc ggacaggcat ggcaaattcc gcttccaaat
    23701 tctgcattgc caaaggcggc agacgggaag taaaaaaaga cgaaagcggc ggcggatatg
    23761 ccctgtgcca tttgccggac agcaggattg tcgaggagtg ggaatattgc cgttcgcaac
    23821 attgatactg cgcgatatac ggcaaatatt gtgggaagtt tccgcttttg cgtataatgc
    23881 gccctacctg acaaattttg tcaactttat caaaaggaat aagcgatggc ttccatccac
    23941 gaccaaatta aagaagtagt aacgacacac cgcgtcgtat tgtttatgaa aggtacgaag
    24001 cagtttccgc aatgcggttt ctcttcccgc gccgtgcaaa tcctgaacgc ggcaggctgc
    24061 accgattacg ttgctgtcaa cgtattggaa aatcccgaag tacgccaagg cattaaggaa
    24121 tacagcgact ggccgaccat cccccaactt tatgtgaacg gcgagtttgt cggcggttcg
    24181 gacatcctga tggaaatgta tgaggcaggc gagctgcaag agctgctgaa agcctgatgg
    24241 attcggcaat gccgtctgaa cgtgtttcag acggcatttt cttttccggc aaattaaaaa
    24301 aaagtataat gacgcgtctc aaaatcacac tggaacaccg cgatgaacgt taacgttatc
    24361 aaccatccgc tcgtccgcca caaactgacc ctgatgaggg aggcggattg cagcacctac
    24421 aaattccgta cgctgaccac cgagttggcg cgcctgatgg catacgaggc aagccgtgat
    24481 tttgaaattg aaaaatacct tatcgacgga tggtgcggac agattgaagg cgaccgcatc
    24541 aaaggcaaaa ccctgaccgt cgtccccatc ctgcgcgccg gtttgggtat gctcgacggc
    24601 gtgctcgacc tgattccgac tgccaaaatc agcgtggtcg gtttgcagcg cgacgaggaa
    24661 acgctgaagc ctatttccta ttttgagaaa tttgtggaca gtatggacga gcgtccggct
    24721 ttgattatcg atcctatgct ggcgacaggc ggttcgatgg tggccaccat cgacctgttg
    24781 aaagaaaaag gttgccgcaa catcaaagcc ttagtcttgg ttgccgcccc tgagggcgtg
    24841 aaggctgtta atgatgcgca tcccgatgtt acgatttata ccgccgcgct ggatagccgt
    24901 ttgaacgaaa acggctatat tattcccggt ctgggcgatg cgggcgacaa gattttcggc
    24961 acgcgctaac tgactgattt tcggatttga tatgaatttc caagactatc tcgccacatt
    25021 tccttcaatc gaccatctgg gcggtttgga tgttcaggat gccgaaggca aaacggttca
    25081 ccacattccc gccgttcagg gcaagctcgg ttcgctcaag ctgtacaatg ccttggcgga
    25141 acgttttgat ggaaaattgg gtaaagaagc ggcagaacag ggtttgatat ggtttgccga
    25201 acatgttgcc gacgcgcgcg cccatccggg gaagcatccg aacatcgatt tgctggaaaa
    25261 tgtcgtgcaa agcggcgaaa ccctcctgct caaaccgctt gccgcgcaat aattttcgac
    25321 catgccgtct gaaattcgtt tcagacggca ttttgtcgga aagaagaccg taaaacgggc
    25381 attttctttt ctatttggct gtgttttaac aatccgttga tttttgcact aatttttgat
    25441 aaaatccctt ataacaaatt gaactataag ggattttata atgtcgggcg taacaaaaga
    25501 attagacatt ttaaaacaac tttttgaaaa tttgtccgat acggataaac aggctttttt
    25561 gacttctgtc agctcaaaag aacaggttaa aaaagtcatt gaaccaagaa aagttacgaa
    25621 gtgcccacat tgccaatcta cacatttcgt caaaaatggc aaagattgtg gcaaccaacg
    25681 ttttttgtgt cgtgattgta aaaagtcttt tgttgagcag acaggcacta ttctctacaa
    25741 cacgcaaaaa gacattgaag tttgggaaaa atacattcat tgtatgattg aaaaataccc
    25801 acttcgcaaa tgtgctgaaa tttgcaaaat caatcttgct actgcgttta cttggcggca
    25861 caaaattttg gacgcacttc aaaacatgat gaatgaagtt gagttagacg gcattgtgca
    25921 agctgatgaa acttattcga cgatttctta caaagggcac cacaaaaatt ttaatctgcc
    25981 acgtcctgct cacaaacgag gaacgagagc aacgaaacgt ggcatttcca aagaacaagt
    26041 ttgtgttcct tgtggtatca atttagacgg taaatctgtt gctagaatta gcaatttggg
    26101 taagccatct ctaaaaaata tcaactgatt ggcattgaaa acaacccaaa aatgtttgct
    26161 cttgccgcca gtaatatgat tttacgcgga gacggtaaag ccaatttaca ccaaagcagt
    26221 tgtttcatga ctgattttca ggatttaatc aaaaatccca aacctgaaac aggcttaaaa
    26281 cgcccaaatg ttggctttct caatccacct tacgcccaat ccaaaagcga tgccgaattg
    26341 catgaacttt attttgtcaa agaaatgttg gatatgttgg cagaaggtgg cacaggcatt
    26401 gccattattc cagtcagttg cgtgattgca ccaagcaaag ccaaaagcga aattgtgaaa
    26461 tatcatcgct taaaagccgt gatgtctatg ccgagcgaac tgttttaccc agttggcacg
    26521 gtaacgtgca ttgtcgtatt tgaagcccat aaaccgcatt ttcagacagt cgtgattgac
    26581 ccggacacac aagaagaaat cagcacgaaa aaagcctgtc gcaaaacgtg gtttggctac
    26641 tggcgtgatg acggttttga aaaaaccaaa cacttgggac gcattgattt atacgaccgc
    26701 tggcagggca ttaaagcgcg ctggttggaa cattatttaa acaacgaagt tcacacagga
    26761 gaatcggtaa cagcatttgt aactgataac gatgaatggg ttgccgaagc ctatttggaa
    26821 actgattatt ccaaaattac ccgagcagat tttgagcaag tcgtgcgtga atttgcttta
    26881 tttcaactac tgggagcgga agtagggccg actgaaaatt tggataatga aagctatgaa
    26941 gacgatgaca ataacgactt cggagacgat gaataatggt tgaattgcaa gagatttttg
    27001 atgtgagtta cggttcaaaa ttagatttga ataaaatgag cagcttcaat ccaacaatca
    27061 actttgtagg caggtcaggc aaaaataatg gtgtaacagc atctgtggat ttattgaaaa
    27121 atacaaaacc ttatccagca ggattattaa ctgttgcatt aggtggttct gttttatcta
    27181 cttttttaca aaacaaacca ttttatacag ctcaaaatgt tgctgtttta aatcccaaaa
    27241 cagaaatgac agaacaacaa aaactctttt attgtgctgc tatttttgcc aatgcctacc
    27301 gtttttctgc ttgcggtagg gaagctaacc gcacgttacg acaactgttt gtgccatctt
    27361 tggatgagat cccaagctgg gttgaaagcg tgaatttaaa tccatctgcg ggtgtaaccg
    27421 aaccgaaatt aaaagaaccg cttgatttgc ctgtggttcg acaatcaaaa cgacttgatg
    27481 aaatttttac tattcaaaac ggcattgccg caaccaaatt aaaagaattt gaacaacggc
    27541 aaaaagacac ggttgtctat atccgtcctg ccagtacgca agcaagaacg ctacgaagtt
    27601 atatcgctcg tgatagcgtt gatgaaaaac atatttttcc atgccatacg cttttcactt
    27661 ctaccaatgg cgaaggtagc catacttata gctatgtttc aacttgtgaa tttgtagcaa
    27721 atagtgatgt cgccgtatta acacccatac agtccgatat gccaatagaa gtaaaactgt
    27781 attacgctaa atgtattaca gcaaaccgct atctgttttc ttatggacgt aaacccaaag
    27841 gcgaaaaatt aaaaagcatt atgttaccgt attttgacca acaagaagat tttgattata
    27901 tctgccgttt cattcacacc ttgctattta gtaacaattt gtagattacc acccttataa
    27961 acaaaacaac ccgccgtaat agatgaaata gagaactgtt ttttagtgtg aattcatctt
    28021 aagcaatcaa cggattgtta aaacacagcc ttctatttca ggatacgggc aatgatgttt
    28081 caacacacag gacgacacat aaagcgccgc cctatgtgtt gccctaattt gaaaggggtt
    28141 acaccccttt caaataaaat ctgatgctgc tgccacgaag gacggatgtc cgaatggcgg
    28201 ggtttcaacc attaaggaaa ttatgatgaa aaaaatgttc ctttctgccg cattgcttct
    28261 gtcggctgcc gcccaaaccg tgtgggcgga tacggtattt tcctgtaaaa cggacaacaa
    28321 caaatacata gaagttcaaa aaatcaaccg caatctttac gaatattcgt tcggcagtgc
    28381 ggcaaaaaaa gaaattgcca tacgcaacag caaagctgac ctgttggggc gttccgacag
    28441 gtggcaaggc atgggcagcg gacgccgggc aacgatgaaa ttccaaaacg gcgaatttat
    28501 gtacaccgta tggacaggct tcgattccgt gactcatacg gaaagcagcg gtgtcgttgt
    28561 ggagcgtagg ggcaaggaag tcgcacgggt aggctgtacg ccgaaaaccg cgcaggcgaa
    28621 tttcaacgat gacgattttt cccggtaatc ggggcggata aggcgatgga aacagcgaag
    28681 cccgtcatgc tgattgtccg cccgtcgggc agggcgaagg acgatgtgga agtctgccgt
    28741 cgtgccggat ggcaggcgga agtgttgagt ccgattgaaa tcgaaaccga cgaagcaagc
    28801 ctgaaacggc tgccggaaat gtatgcccgt gcggatgccg tgttttgggt cagtccggcc
    28861 gccgttgaaa ccgccgtccc gtaccttaac ctttcagacg gcataaaggc gcacattgcc
    28921 gtagggcaag gcagccgccg tgccttggcg cgttatgcgg gcgcgggcgt gtttgcacct
    28981 gaagacggca acgacagcga ggcggttttg cgcctgccgg tttggaacag tctgcccgaa
    29041 ggtgcgcgcg tattgtctgt gcgcggacac ggcgggcggg attttctgat gaatgccttg
    29101 caggagaaag gttttcggac ggaggtggca gaagtctatt tcagacggca taaacctttg
    29161 aactttcaaa atttccaaac cgaaaatatt gccgccgcct atattacgtc cacagaactt
    29221 gtgcagtcgc tgtttgcaca gcttccgccg caattttccc gattcttcaa atccttgcta
    29281 tactttaccc atcatccgcg cattgcggag gcattgaagc gcgaaggcgt gtgttcggtc
    29341 gaaaccgtcc ctacgctgga agccgcgctt tcctattctt ccatttccgt ttcagacggc
    29401 atggtctttc ccggaacctc aaaccaataa ggagcaaaac ggtgggcgaa cctgaaaaca
    29461 aatcatccga acccgtacgc gagatacagg catcaaaaga aatgccgtct gaaacctctt
    29521 ccccacgcaa agaaaacgaa acagaagtac acattcccgc cgctcctttt atcgtcaaac
    29581 agtccggcag caacgctttg gcggcctgcg ccttggtatt ggcggcattg ggtttgggtg
    29641 caagtggttt tttgtttgtc caaggacaga atgtcttgaa aaaccaagag ctggcattca
    29701 accagaaaat cgacaaagcc gccttgggcg agtcggaaaa cgccgccctg ctcaaagaca
    29761 acctcaaccg ccaaagtgcc atacagtccg aactcgaccg tttggacagc ggtgtcaaag
    29821 ccaacggcga acaaatcctg atgacgcaaa aagcctatcg cgagctgacc aaagggcgtg
    29881 ccgattggct ggtggacgaa accgagacca tactcaatct ggcggcgcaa cagctggtgt
    29941 tgaccggcaa tatccaaacg gcagtcggcg tgttggagca tatcgacagc cgcctgtccc
    30001 gtttcgatca ggcagagctt ctgccgatca aacaggcggt cagcagcgat ttggcggaac
    30061 tgaaaaaccg tccctatgtc gatatttccg gcacggcatt gcgcctcgac cggttggaaa
    30121 ccgccgtatc cggactgccg ctgattttgg acggcgtatt gaaaccgggc gtacaggccc
    30181 gcaacgaagc cgtttccgct tcatggtggc agaacgtatg ggaaaaatcc ctcggcacat
    30241 tgaaggggct ggtcgaaatc cgccgtttgg aaaacaacga tgccatgctg atttctcccg
    30301 aacaggcata ttttgtgcgt gaaaacctgc gtctgcgcct gttggatgcg cgcaccgcat
    30361 tgatgcagcg caacggcgaa gtctatcagg gcgatttgaa caatgccgaa gccgccgtca
    30421 gacagtattt cgatgccaag tcgcccgcca cgcagtcgtg gctgaaagaa ctggcggaat
    30481 tgaaaacact ggatgtacgc atgacggcgg atgacggctt gaagaccagt ttaaatgccg
    30541 tccgcgccta tcgcgacggt acgcgcatga cggcggcgga aaatcaagaa gcggaacagg
    30601 cggcttccga accggcaaac gaaaacacag cttccgaacc ggctgccgca tcggatgtga
    30661 aggccataga agcaccgtcc ctgccttcgg aacgcaaacc ggaacagcct gcaaaaaaac
    30721 agcccgcacc ggaaaaggca gggcgttcgc cgtccgctaa aggagaacgc gcatgaaaac
    30781 ggtagtctgg attgtcgtcc tgtttgccgc cgccgtcgga ctggcgctgg cttcgggcat
    30841 ttacaccggc gacgtgtata tcgtactcgg acagaccatg ctcagaatca acctgcacgc
    30901 ttttgtgtta ggttcgctga ttgccgtcgt ggtgtggtat ttcctgttta aattcatcat
    30961 cggcgtactt aatatccccg aaaagatgca gcgttccggt tcggcgcgga aaggccgcaa
    31021 ggccgcgctt gccttgaata aggcaggttt ggcgtatttc gaagggcgtt ttgaaaaggc
    31081 ggaactcgaa gcctctcgag tgttgggcaa caaagaggcc ggagacaacc ggactttggc
    31141 attgatgctg ggcgcgcacg cggcaggaca gatggaaaat atcgagctgc gcgaccgtta
    31201 tcttgcggaa atcgccaaac tgccggaaaa acagcagctt tcccgctacc tgctgctggc
    31261 ggaatcggca ctgaaccggc gcgattacga agcggcggaa gccaatcttc atgcggcggc
    31321 gaagatgaat gccaacctta cgcgcctcgt gcgtctgcaa cttcgttacg ccttcgatcg
    31381 gggcgatgcg ttgcaggttc tggcaaaaac cgaaaaactt tccaaggcgg gcgcgttggg
    31441 caaatcggaa atggaacggt atcaaaattg ggcataccgc cgccagatgg cggatgctgc
    31501 cgatgccgcc gctttgaaaa cctgcctgaa gcggattccc gacagcctca aaaacgggga
    31561 attgagcgta tcggttgcgg aaaagtacga acgtttggga ctgtatgccg atgcggtcaa
    31621 atgggtcaaa cagcattatc cgcacaaccg ccgccccgag cttttggaag cctttgtcga
    31681 aagcgtgcgc tttttgggcg agcgcgaaca gcagaaagcc atcgattttg ccgattcttg
    31741 gctgaaagaa cagcccgata acgcgcttct gctgatgtat ctcggccggc tcgcctacgg
    31801 ccgcaaactt tggggtaagg caaaaggcta ccttgaagcg agtattgcac tgaagccgag
    31861 tattccggcg cgtttggtgt tggcaaaggt ttttgacgaa accgcacagt cgcaaaaagc
    31921 cgaagcacag cgcaacttgg ttttggcaag cgttgccggg gaaaaccgcc cttccgccga
    31981 aacccgttga aaccttcaga cggcatcgtt gaaatgccgt ctgaaaacca tttcacttga
    32041 caaacagatt gacagaaaac ccgtatgact cttttaaaaa acgatacctt cctccgcgcc
    32101 ctgctcaaac agcccgtcga atacacaccg atttggatga tgcgccaggc ggggcgttat
    32161 ctgcccgaat acaaagccac gcgcgcgaaa gcgggcagct tcctcgattt gtgcaaaaac
    32221 accggattgg cgaccgaagt caccatccag cctttggaac gcttcgattt ggacgcggcg
    32281 attttgtttt ccgacatctt gaccgttccc gatgcaatgg gcttggggct gtattttgcc
    32341 gaaggcgaag gcccgaaatt caaacgcgcc ttgcaacacg aatccgacat cgccaagctg
    32401 cacgttcccg acatggaaaa actgcaatac gttttcgacg cggtaacttc catccgtaaa
    32461 gcattggacg gccgcgtacc gcttatcggc ttctccggca gcccgttcac gctcgcctgt
    32521 tatatggtcg aaggcggcgg cagcaaagaa ttccgcacca tcaaaaccat gatgtactcg
    32581 cgccccgatt tgctgtacaa aatcctcgat accaacgccc aagccgttac cgcctacctc
    32641 aacgcccaaa tcgacgcggg cgcgcaggcg gtgcagattt tcgacacttg gggcggcgtg
    32701 ttgagcgacg cggcgtttaa agagttcagc ctcaaataca tccgccaaat cgttgccgga
    32761 ctcaaacgtg aaagcgaagg tcgccgcgtg cctgttatcg tgtttgccaa aggcggcggg
    32821 ctgtggctgg aaagcatggc ccaaatcggc gcagacgcat tgggcttgga ctggacgtgc
    32881 aacatcggcg aagcacgccg ccgcgtcggc aaccaagtcg ccctgcaagg caacttcgac
    32941 ccgtccgccc tcttcggtac gcccgaatcc atccgcaccg aggtcgcacg tatcctgacc
    33001 ggctacggac acggcagcgg ccatgtcttc aacctcggac acggcatcaa ccaacacgcc
    33061 gaccccgaac acgccaaaat cttagtcgac accgtacacg agctgtcgcg gcagtatcac
    33121 ggcgggtaag ccggcaggaa accgcccgat atgccgtctg aagaatcgga agttttcaga
    33181 cggcatatgc ttcattttgc actttggtac accaagccat tgtgtggtag cttgatattg
    33241 ggtaaccaaa aatcttttcc ctgccaacct ttgtctttat ttcctactac ttgataaagc
    33301 gtaaggaata aatcattggg atatttttct cctaatttac ggtcgtcttc cgaaagcatt
    33361 gtgccggttg ctcgagaaag tttacgtccg gttttgatca aaacataggt tttaaaactt
    33421 ggacgttgtg cttttaatgc ttctacacca gcaataaatt tttccttatt ccagtcatct
    33481 ggaacataac gacccaattt atctagaacc aagaataaat cttctatatc tatttgatat
    33541 aaatcagatt gaatttcatc tttcaaaata gaaggcaaaa ttttgttaat ctccgataaa
    33601 ttatcttcgt ttgggtggag tggaaaataa ttcacaccac ccacaatttg attgatacta
    33661 tcgaatttca atacattttt tcgagttgga ttgatatttt tcggataaat aacctgaata
    33721 ttgccgcctg aattttttgc ctgcccaata atcagattat ttgcttgatt gagttgtaca
    33781 aagaagtaat agacatcgaa cggaatataa agccgtaata atgatttatc gcggtcatat
    33841 ccaaaaatac gcgaatgttg ccagaaagta tctgcattcg gttttttggc agtgcgacta
    33901 taataaaccg tttgtagttt cggaatagtc aagccacgac caatcacatt accaccaata
    33961 atgatgttga aacctttttc taagtcaaaa tctgtttctg tctgcgagtt aacgacaaga
    34021 gtagagattt gtttattctc taaaagtgct gtcaattttt cgtatatttc atcaaagtga
    34081 tgaatatcgg gcttggtctt ttgcaaatcc aaataacttt ctttaaagct acctgcaagg
    34141 tcttccccat tattgactgc ttgcactaag tcatttaaaa aggcttggat cttctttgaa
    34201 aaggcttgat gatcttgaat tttatagctt ggatgtagtg caaaattaca gttagcctta
    34261 tcacatagcg cgaattctgc acaggttatt agaaaactaa gcaatgcctg ttttgctcct
    34321 tcggcaattt caccactctc gtctttcata tcatccaatt cgctatcaat aaaacgaact
    34381 atatagcttg gtggatcaga aaagacaaag ttgccgccga tgtatttttc gcctgcttca
    34441 aagaagtgga taaattcagg ttgccaatca gattcttcat gttgtaataa aagcgattga
    34501 ggcgtggcag tcaactggat aaacaggctt tgacaacagg aatttttgat gtcgtttagc
    34561 agtttattga tagtactggc atctttagcc ggcttatcag aattagtatt taggctggca
    34621 gcatcggctt catcgtccac aataaccaaa ggatagcctt tcaggctact ttgactggca
    34681 aacaaattac gccaacgttt caatacacgg gcattctttt taatcacgac caagatgggg
    34741 ttctctgcct tcattacttc cataaaactt cggtcgtcag cttcagacaa tacgataaag
    34801 tttttcagat tggctttggc tcgtttgact gtttgatcct gtaaatctac gctgtcagta
    34861 gtaagataca aaaaaacttt gtggtcgcca tcatcagcca gcgcacttaa tacacccaaa
    34921 acctgtgccg ttttgccact ttgaacattg cccagcaata aaacattttg ggcgattttc
    34981 ggctcggttt gtgacaattt ttccataaaa ccatcaacgg tatttttaac agaatcagct
    35041 aattcgggag gggtcaattg gttcaagtag gttcgcaaca tttagttttt ccccttaaat
    35101 gagagcagcc aaacatcagg attatcggtt gaacgtaact caaaatgatc gttaccgtat
    35161 tcgcgtaggg tttcatgcgt aatcttctcg ttattttgca ggcagccatg actttccaaa
    35221 cgacctttaa tccatttacc aagtgtcttt aaatcatttt ctgagcggaa gtttttggag
    35281 taatcccccg atgtcttgca ttgaaattgc caaccatcat cggtaataac tgtaaaagac
    35341 ttcagaaccg gatacccttc ttgtgaagtg atgtctttgg atacaatcaa ctctacttca
    35401 taccaaggtc gtggtttgac aaaccctcgt ttatctcgtc gaccttctcc aaaaaataca
    35461 ttcaaattac ttttttcttc ggttttagct ggaattgaga aatgatattc tgacgtttgg
    35521 gcaaataatt gccgaatctg ttctggtgca attttctgaa cacccaaaca attttctaaa
    35581 tggctattat gttcaataaa tttacttggt ctttcaactt cttggatatt tttgcctagc
    35641 ttatgaatag tactttgaat atctgcctgc aaaatctgtg caggcttacc gttcaaatgc
    35701 aacatagttt cataagtacg ttccgtgcta tcccaaaaac acgttaagtt agcagaacca
    35761 attaatccat tgattttttg ataattttta aaggaataca ttttgccgtg aaatttcaca
    35821 aagggggaaa catagacggc tcctcttttc tcatgtcgca aaaaatcatt tagtttacat
    35881 aagctgtcat attgtaaatg gctaaaacct tccaaataat gcattccgac caataaatct
    35941 attttttgaa tatgatcgtt tagctccaaa attttatgta actcaaccac tgcgtcatta
    36001 gatacataac ctgtcgccat caacacttca tccgctgatt taaataaatc catccaaacc
    36061 gcattaagag atttttcagt gattttggca ttggcgatat tggaaaaaac tgtattcatt
    36121 gttttccccc tcgaattttg cttagtcggt catggaataa aatttctttt tcttcgacta
    36181 atttctcatg caaatctact ttctcatagt tgtctgaaaa aatcggtaaa atgctttttg
    36241 ccagttcaac cacgccctga ggaggaacag cattaccaat ctggcgacgt acttcagttg
    36301 ttgatccgac aaactcaaaa tcatcaggaa aactttgaag ccttgctcgt tctctattag
    36361 taaaagcacg cggttcaggg aagtgatagc cccaagtacc accgccacct gctgcaataa
    36421 ttgtttttga tggctcgttc cgatgcatac gacgataaac gtggctaatc atacctttca
    36481 catataaagg atgatcttta ggaatatcgg taaaatttcc accttcagga attaattcca
    36541 acatacggcg tgttttatcg ctgattttca gtaattcatt attactggca ttttgtggaa
    36601 tattggatat ggcctgacct gctgttacat atggttttaa gccgttttcg ccagtttcat
    36661 tgtgcgtcgg ttccggatgg cgaaaatcaa atcctgtatc caaacgtact ccgacaatca
    36721 gcacacgttc acgaaattga ggtacgccaa attctgcaaa gttatacagc ttcgcctgaa
    36781 cgtaataacc gcaattttca aagtcggtaa taatttgctg gatggctttt ttcttgttgg
    36841 cagtcaataa acctttcaca ttctcagcaa caaaaacttt cggttttttt gcatttacaa
    36901 aacgtaaaaa gcttttataa agattgccgc gctcaccctc taagcccggc tgtttccaaa
    36961 tcatggaaaa atcttgacaa gggaatccgc ctaaaatgat gtcgcaatcg ggaatagttg
    37021 gatcattcgg attaatttgt tcaatatcac cttctacgat gacatcgccg atatttttac
    37081 ggaaactttc gcaagcccaa tgggagaaat cgttcgccca aacagtttca caaccagctt
    37141 gatgaaagcc caaatccaaa ccgccacatc ctgaaaatag agataggatt tttggtttgt
    37201 tactagaaga attaagattt gagatttgtt tagatagcat aggatttcac tcctatgcat
    37261 aaatttgata aaaatccttg tatggatttt aaaggtgaac tatgctctga acgcaacgca
    37321 acgcaacgca acgcaacgca acgcaacgca acgcaacgca acgcaattct accattatat
    37381 ttaatgggaa agtcattgtt tgggattcct gttttgtatt ttc
//
LOCUS       DAWXHA010000006        36267 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.006, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000006 DAWXHA010000000
VERSION     DAWXHA010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 36267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36267
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.006"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            435..815
                     /locus_tag="AABD07_000237"
     CDS             435..815
                     /locus_tag="AABD07_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354851.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKLV
                     TVVPLSSTEPVPLADCHHKMSENPLPDKPHIQCRAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAVKTAVAKAFKLY"
     gene            complement(1016..1858)
                     /locus_tag="AABD07_000238"
     CDS             complement(1016..1858)
                     /locus_tag="AABD07_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354852.1"
                     /translation="MQNTISVFSFKSQNVRTQILGAEPWFCLGDVAEILQIQNARQLP
                     LKDQGIQKSSVATKKGNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKT
                     GGYQITPKTTADDRTGLRRAVAALVGRKRIGYSSAYSMIHQRFNVEAVEGIPADKLPE
                     AVAYVHALTLHTGLAGEVPDREPLPAPQPALPIDGNSLADIAAMVYYGTRMIESGKDV
                     SAPLKQLGNRQAVTMLTVWHETRSILKRSAAALEVLRGYADKDASGRIAACLEGIYGK
                     AAAR"
     gene            complement(2861..3352)
                     /locus_tag="AABD07_000239"
     CDS             complement(2861..3352)
                     /locus_tag="AABD07_000239"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HFB2354853.1"
                     /translation="MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAP
                     AEQAQRLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(3426..4181)
                     /locus_tag="AABD07_000240"
     CDS             complement(3426..4181)
                     /locus_tag="AABD07_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFB2354854.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQRPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMEQLPEPLASQFAGMNRGDVTRNPVKLGERYYLFKLGAVGKNPDAQ
                     PFELVRNQLEQGLRQEKARLKIDALLEENGVKP"
     gene            complement(4251..5117)
                     /locus_tag="AABD07_000241"
     CDS             complement(4251..5117)
                     /locus_tag="AABD07_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354855.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKDALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAVYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKRTGAPDGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(5166..5444)
                     /locus_tag="AABD07_000242"
     CDS             complement(5166..5444)
                     /locus_tag="AABD07_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HFB2354856.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGLSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(5444..5722)
                     /locus_tag="AABD07_000243"
     CDS             complement(5444..5722)
                     /locus_tag="AABD07_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354857.1"
                     /translation="MLLATDGEDVHEARMAARPEHFKRLETLKSEGRLLTAGPNLLPD
                     NPERVSGSLIVAQFESLDAAQAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(5737..6267)
                     /locus_tag="AABD07_000244"
     CDS             complement(5737..6267)
                     /locus_tag="AABD07_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HFB2354858.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAAAAVALVAGVVQAAFLYWK
                     HKRLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPTVLFWCGALFLLGSHLAGKNGLK
                     ASIGREIQLPDAVWGKLTYMWVGFLIFMGIANWFVFTRFEAQWVNYKMFGSTALMLFF
                     FIIQGIYLSTYLKKED"
     gene            6575..8891
                     /locus_tag="AABD07_000245"
                     /pseudo
     CDS             6575..8891
                     /locus_tag="AABD07_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
     gene            complement(9064..9480)
                     /gene="gloA"
                     /locus_tag="AABD07_000246"
     CDS             complement(9064..9480)
                     /gene="gloA"
                     /locus_tag="AABD07_000246"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HFB2354859.1"
                     /translation="MRLLHTMLRVGNLEKSLDSYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGL
                     MKHGTTVIAFVEDPDGCKIEFVQKKSGDDSVAYANT"
     gene            complement(9505..10674)
                     /gene="lapB"
                     /locus_tag="AABD07_000247"
     CDS             complement(9505..10674)
                     /gene="lapB"
                     /locus_tag="AABD07_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HFB2354860.1"
                     /translation="MDNELWIILLPIILLPVFFTMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD
                     WEKAVETAQLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHVYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKGEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(10685..10999)
                     /locus_tag="AABD07_000248"
     CDS             complement(10685..10999)
                     /locus_tag="AABD07_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HFB2354861.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINMDAVTFSYLPGQSANLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENSRLRAEVKKSARLSGQKLTAPPIQNAAESAK
                     QP"
     gene            11309..12307
                     /gene="ilvE"
                     /locus_tag="AABD07_000249"
     CDS             11309..12307
                     /gene="ilvE"
                     /locus_tag="AABD07_000249"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HFB2354862.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLTLAPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWLLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKNQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(12552..13337)
                     /gene="fabI"
                     /locus_tag="AABD07_000250"
     CDS             complement(12552..13337)
                     /gene="fabI"
                     /locus_tag="AABD07_000250"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HFB2354863.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(13492..14313)
                     /gene="dapD"
                     /locus_tag="AABD07_000251"
     CDS             complement(13492..14313)
                     /gene="dapD"
                     /locus_tag="AABD07_000251"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007341216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HFB2354864.1"
                     /translation="MSLQNIIETAFENRADITPTTVAPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNAVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGAIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSLPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(14523..16166)
                     /gene="pgi"
                     /locus_tag="AABD07_000252"
     CDS             complement(14523..16166)
                     /gene="pgi"
                     /locus_tag="AABD07_000252"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFB2354865.1"
                     /translation="MDAFTRAWYALERHYQDTCHILLRDRFAAEPDRFERMHERLDGM
                     LFDYSKNRFGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALKFAHSLDDGLYQGITGKRIADFVHIGIGGSDLGPAM
                     CVQALEPFRRQISVHFVSNADPACLDEVLCRLNPETTMFCVASKSFKTPETLLNAEAV
                     KAWYRGAGFSESETARHFCAVSADTEAAQSFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPAWLNQLDMESLGKSRASDGSPAACKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGAEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPCNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            16676..17908
                     /gene="pilG"
                     /locus_tag="AABD07_000253"
     CDS             16676..17908
                     /gene="pilG"
                     /locus_tag="AABD07_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilG"
                     /protein_id="HFB2354866.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGQVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPPLTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLFAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            17982..18842
                     /locus_tag="AABD07_000254"
     CDS             17982..18842
                     /locus_tag="AABD07_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HFB2354867.1"
                     /translation="MSDLSVLSPFAVPLAAVLGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEHLNLPLTDDESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYSSLWLLCAVYKLLTGKTGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGRHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVR"
     gene            18839..19471
                     /locus_tag="AABD07_000255"
     CDS             18839..19471
                     /locus_tag="AABD07_000255"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HFB2354868.1"
                     /translation="MTAWVGLTGGIGSGKSAAAQYFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEIFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAVYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMLLHAFYSGIFASKPTQGKHNG"
     gene            19464..19673
                     /locus_tag="AABD07_000256"
     CDS             19464..19673
                     /locus_tag="AABD07_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HFB2354869.1"
                     /translation="MAESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDGAYR"
     gene            complement(19759..21435)
                     /gene="pilB"
                     /locus_tag="AABD07_000257"
     CDS             complement(19759..21435)
                     /gene="pilB"
                     /locus_tag="AABD07_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HFB2354870.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIAVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVGILDVAYKEGMVDLRRAGILKIMQGITSLEEVTANTND"
     gene            complement(21681..21752)
                     /locus_tag="AABD07_000258"
     tRNA            complement(21681..21752)
                     /locus_tag="AABD07_000258"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21717..21719),aa:Arg,seq:cct)
     gene            complement(21773..22219)
                     /locus_tag="AABD07_000259"
     CDS             complement(21773..22219)
                     /locus_tag="AABD07_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HFB2354871.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITVSATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGCG
                     VPLMGRQPVLVTGLLIGTVIGVAFMGGIPVGPLIAADILSFVAGKV"
     gene            complement(22223..23197)
                     /locus_tag="AABD07_000260"
     CDS             complement(22223..23197)
                     /locus_tag="AABD07_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HFB2354872.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIRVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRGYFEKIRDYV
                     VRSDALAYSIGEARKAVDCAVAALDALSDSEVKDAMIQLAKESLVRVS"
     gene            complement(23213..23401)
                     /locus_tag="AABD07_000261"
     CDS             complement(23213..23401)
                     /locus_tag="AABD07_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354873.1"
                     /translation="MVNIRTPLCEIGHCIVICLFCQSLRGSGNHMPSEKMYPDGFADI
                     IARYLNQLSSGICRLTET"
     gene            23409..23729
                     /gene="rplU"
                     /locus_tag="AABD07_000262"
     CDS             23409..23729
                     /gene="rplU"
                     /locus_tag="AABD07_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007341688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HFB2354874.1"
                     /translation="MELSMYAVVKTGGKQYKVSVGEKLKVEQIPAQLDSQIELTEVLM
                     IADGESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEI
                     VAIA"
     gene            23754..24026
                     /gene="rpmA"
                     /locus_tag="AABD07_000263"
     CDS             23754..24026
                     /gene="rpmA"
                     /locus_tag="AABD07_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HFB2354875.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKIDGYVEFKTKGALNRKTVSIRPYTGSEE"
     gene            24261..25445
                     /gene="ubiM"
                     /locus_tag="AABD07_000264"
     CDS             24261..25445
                     /gene="ubiM"
                     /locus_tag="AABD07_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HFB2354876.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNVSILTDTAVKEVKTSDNEAQVFLENGDILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEKRLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(25634..25789)
                     /gene="rpmG"
                     /locus_tag="AABD07_000265"
     CDS             complement(25634..25789)
                     /gene="rpmG"
                     /locus_tag="AABD07_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012696028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HFB2354877.1"
                     /translation="MRDKIKLESGAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(25821..26054)
                     /gene="rpmB"
                     /locus_tag="AABD07_000266"
     CDS             complement(25821..26054)
                     /gene="rpmB"
                     /locus_tag="AABD07_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HFB2354878.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(26126..26314)
                     /locus_tag="AABD07_000267"
     CDS             complement(26126..26314)
                     /locus_tag="AABD07_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354879.1"
                     /translation="MDIEGFENLKCRLKILEICSDGILNAEAPEIRYNRAPSVSHLQT
                     FRRCGTRAAYPRKTSVFL"
     gene            complement(26304..27827)
                     /gene="farB"
                     /locus_tag="AABD07_000268"
     CDS             complement(26304..27827)
                     /gene="farB"
                     /locus_tag="AABD07_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HFB2354880.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFSVANAVSVPLTGFLAKRIGEVKLFTAAAAGFVIASWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRMLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKHRETATVRTPTDYVGLTLMMVGIGALQMM
                     LDRGKELDWFASGEIITLGITALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSAWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGVGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDGQTLGIINNTITQQGFIIGSNEIFLAGSILFIVLIPIVWLAKPPFHSGGGGH"
     gene            complement(27851..29005)
                     /gene="farA"
                     /locus_tag="AABD07_000269"
     CDS             complement(27851..29005)
                     /gene="farA"
                     /locus_tag="AABD07_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HFB2354881.1"
                     /translation="METHTDETKLQNTQVKRKRRLTALTLLFALSAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RTAVSQAQAAVKAALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     regulatory      29246..29290
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            29294..29767
                     /gene="queF"
                     /locus_tag="AABD07_000270"
     CDS             29294..29767
                     /gene="queF"
                     /locus_tag="AABD07_000270"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HFB2354882.1"
                     /translation="MSRNNEELQGISLLGNQKTQYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIVIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAVHPFANYGKAGTEFEALARKRLFEHDAQ"
     gene            29842..30528
                     /locus_tag="AABD07_000271"
     CDS             29842..30528
                     /locus_tag="AABD07_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HFB2354883.1"
                     /translation="MYALTAAQQQKALFRLVLFHILIIAASNYLVQFPFRIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     QFNTFVGRIALASFAAYALGQILDIFVFDKLRRLKAWWIAPAASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCTLFFLPAYGVILNLLTKKLTALQTKQAQ
                     DRPVPSLQNP"
     gene            complement(30878..32170)
                     /locus_tag="AABD07_000272"
     CDS             complement(30878..32170)
                     /locus_tag="AABD07_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HFB2354884.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTEGTERVRPQRV
                     EQKLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGSAREVQFFTDEDGERNLVALEKKGGIWRRSASDADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLLYDSLYFHGQQ
                     VAAGDILAAEVVKGGTTHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            32247..33215
                     /locus_tag="AABD07_000273"
     CDS             32247..33215
                     /locus_tag="AABD07_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354885.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSPHRQSCTASA
                     FYARYLWCGRLAQRPAQSLNMPSETVALATPVWQKMGLHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLNAHPVNHNRKKRGLPELNGLWLWDSLHGSAQGGTLFADTVWSRFH
                     PNRRALPDSFRAYAETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWGERWFAP
                     LYEAVRTGKIKRLDIATDGQHGGTLTFKPTDRRKFWRCTKTFDGIW"
     gene            complement(33416..34885)
                     /locus_tag="AABD07_000274"
     CDS             complement(33416..34885)
                     /locus_tag="AABD07_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HFB2354886.1"
                     /translation="MVIFYFYFCGKTFMPARNRWMLLPLLASAAYAEETPREPDLRSR
                     PEFRLHEAEVKPIDREKVPGQVREKGKVLQVDGETLLKNPELLSRAMYSAVVSNNIAG
                     IRVILPIYLQQARQDKMLALYAQGILAQAEGRVKEAVSHYRELIAAQPDAPAVRMRLA
                     AALFEDRQNEAAADQFDRLKTEDLPPQLMEQVELYRKALRERDAWKVNGGFSITREHN
                     INQAPKQQQYGNWTFPKQVDGTAVNYRFGAEKKWSLKNGWYTTAGGDVSGRAYPGNKK
                     FNDMTAGVSGGIGFADRRKDVGLAVFHERRTYGNDAYSYANGARLYFNRWQTPRWQTL
                     SSAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWTGGLDFYRERNPADRGDNFNR
                     YGLRFAWGQEWGGSGLSSLFRLGVAKRHYEKPGFFSSFKGERRRDKESDTSLSLWHRA
                     LHFKGITPRLTLSHRETWSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(35127..36047)
                     /locus_tag="AABD07_000275"
                     /pseudo
     CDS             complement(35127..36047)
                     /locus_tag="AABD07_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255663.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         8643 a        10269 c         9040 g         8315 t
ORIGIN      
        1 ctgaaggcgg ccggtatgta taacgactgc agggcgcggc acggcgcgct ggtacgggcg
       61 ttgggcgcgg attgagttgt caaccggaag tttgcaaccg aaccgtcggt tccgggttgg
      121 cggccgcatc gggggaagtg tcggcattcc ccccgatttt ttacatatcg ggcggacgcg
      181 gcaaattttt gccgttttgt ttgcgcgaag ggggcgttat acaaaattat caggcgcacc
      241 aataatgggc ggaaatgaaa atgccgtacc gatccggaca acaaccgatg ccgcaccctg
      301 cgggcaggct tcgcactctg aaaggttcag gcggcatttt tattggaagg cttttttttg
      361 caaccgcctt acacaaagcg gttttttgtg taagaactgc cataacagcc gcctgtcatc
      421 gtcaggagcg gctaatgcct ttaaaattcc aaccaaggga acgttcagtt atcatgtgcg
      481 actttcgcgg ttatgaagaa ccggaaatgg tcaagaaacg ccctgtcgtc gtcatagcgc
      541 gaaacaggca caacggcaaa ctggtaacgg tcgtaccctt aagcagcaca gagcctgtcc
      601 ctttggcgga ctgccaccac aaaatgagtg aaaacccctt accggacaag ccgcacatcc
      661 aatgtcgggc aaaatgcgat atgacggcaa cagtcggatt ggcacgatta gaccgataca
      721 aacccaaagg gcgcgaccgt tgcatcccaa taatcagtga agaggatttt caggcggtta
      781 aaacagccgt tgccaaggca ttcaaactgt actagaataa aaccgttccc ttaaaggggc
      841 ttgcaagact gttccgaaat atgggcagcc gcgcacgggc gacaggcgat gacaagccgt
      901 ccgtgcgtgt gacggggcgc ggaatgcgcc ccttgtcgta tctgcaaacg cctacaaatc
      961 cccaatcatc ccttcaataa aaatgccgtc cgaaggttca gacggcattt tccgtttacc
     1021 ttgccgcagc cttgccgtaa atgccttcaa gacatgcggc tatgcggccg gaggcgtctt
     1081 tgtccgcata tccccgcaac acttcgaggg ccgcggcgga tcttttcagg attgaacggg
     1141 tttcgtgcca gaccgtcagc atcgtaaccg cctgtctgtt gccaagctgt ttgagcggtg
     1201 cggaaacgtc tttgcccgat tcaatcatcc gtgtgccgta ataaaccata gcggcaatgt
     1261 cggctaaaga gttgccgtcg atgggcaggg cgggttgcgg cgcgggcaac ggttcgcggt
     1321 cggggacttc gccggccaaa cccgtgtgca gtgtcaatgc gtggacgtag gcgacggctt
     1381 cgggcagttt gtcggcgggg atgccttcga cggcttcgac gttgaagcgt tggtgtatca
     1441 tactgtacgc ggaggagtag cctatgcgtt tgcgcccgac aagcgcggca accgcccggc
     1501 gcaatccggt acggtcgtcg gcggtggttt tgggagtaat ttggtagccg cctgttttgc
     1561 ggatttgagg gataacctct tcaaatatcc agtcttggaa tttgacggct tcggctttgc
     1621 gtgaacggaa gatgactcgg tagagattcg gctcgttgat gaaaagtaat tcttggttgc
     1681 ctttttttgt tgcaacgctg gatttttgaa tgccctggtc ttttaatggc aactgacggg
     1741 cattttgaat ttgaagaatt tccgcaacat cgccaaggca aaaccaaggt tcagccccca
     1801 agatttgagt acggacattt tgagatttga aagaaaatac agaaatggtg ttttgcattt
     1861 taagctccac gaaagtttga aagcctctct tcgaccaaga agaggtaggc ggacgtttca
     1921 ggttggtcga ctgctcgtgg aaacagcaca tccggagatg tcccgaaagt ccgcccgttg
     1981 gctttttcag caagggtgta tgtttaacat acacccttca gggaactctt atcaaaacaa
     2041 aagccgcaag cgcggcaata accacgaaag aaacaggcga ccaaacctgt gaaccgaact
     2101 ttactattat tccgctattg cgtcaatatt ttggggggaa gcacggacgg agctttgttg
     2161 aaagtttaaa acttggacag tattcatggt agaatgacct ttctatttca tggtagatag
     2221 acgcggaaag agagttgccg ctctgctttc cacctgccca aatcaagtta cagcttggtt
     2281 tgggcttctt ttttacctgc aatcagcaag tgttgaaatt ataatttgta tctacgattc
     2341 atgcaagcca tttctattat tttttcagtt tttctaattc aagttcatgt ttcagctttt
     2401 cttttaccca tttggagaag tctaaattat tggaaaattc caataaatta gcttcttttt
     2461 cagtgttaaa tgaaacgtgc tttaaaacgc gcttagattc gtagcttttt ttggattgtt
     2521 tggttgggtt cattcttccc ccttgttgaa aataatcgta gatacatttt actcgattta
     2581 aaatcatagg gcaacaaaaa aaccgccaag tttgcggctt ggcggcggtc gggctatttt
     2641 aagaactctt ttcggatttt ttctttaacc cattgggaaa aactaatttt atttgcacct
     2701 tatttgcacc ttttttataa atataattca aatatttgat ttatatatta atttaattaa
     2761 atattacatg accctgcata ggggcgacgg aaaggcggcg cgggggaagg gtgtgtgtat
     2821 tgtcgttcat tgtcgatatt tcatcattgc ggactcaatt tcaatccgga acaaccttca
     2881 tttttgggga aatccgcgtc atgaaagagt ccagcagtat ggttaccggc ccgtcgttgc
     2941 agagcgacac ctgcatatgc gtgcggaaac gccctgtttc gacatgaatc ccgtgtccgc
     3001 gtaacagctc cgccgttcgc aggtaaagcc gttgcgcctg ttctgccggc gcggcttggg
     3061 aaaacgaagg ccgccgcccg cttgccgcgt cggcataaag cgtaaactgc gacaccagca
     3121 gcaccgcgcc gccgacatct ttcaaagaca ggttcagctt gcccgcttcg tcttcaaaca
     3181 cgcgcaaatg tgcgattttg tcggcgatat agcgtgcatc tttttctgtg tcgctatgcg
     3241 ttacaccgag taacacgaca aacccgccgt cgattttgcc gcaggtttcc gtgccggctt
     3301 cggacacgac atccaccttt gcacctaccg ttttctgtat gaccgcacgc ataagccgtc
     3361 ctccttacct gaacgtgcaa tgccgtctga aaaggcttca gacggcatcg gtatcggaaa
     3421 tgccattacg gtttgacacc gttttcttcc aaaagggcat cgattttcaa gcgggctttt
     3481 tcctgcctca aaccttgttc caactggttt ctgaccaact cgaaaggctg cgcgtcgggg
     3541 tttttcccga ccgcgccgag tttgaacagg taatagcgtt cgcccaattt gaccggattg
     3601 cgggtaacgt cgccacggtt cataccggca aactgcgaag ccagcggctc gggaagctgc
     3661 tccataatga aaccgtcgaa cgcctgctcg tcgttcggat aacgcttcat cagcccttca
     3721 aaagacagcc ctttgagcag gagctgctgc gcctgacgcg cctcctcttc ggttgcgaag
     3781 ctgacctgct gcaatttgat catgcggatt tgccgctcat aaaactgacg cagtgcgctt
     3841 tcggaaaccg tttccgaacg ttccagaaaa cggacgtact cctcggcata aaaagacgct
     3901 tcggcgattt taaagcggtt ttggacatcc ttatccttat ccaaaccttc cttcaatgcc
     3961 ctgtttttca aaacttccaa agtttgcagc cggcggacgg catcgtttcg gattgcctgc
     4021 ccgtccggtc tttgggactg ctccgcatgc cggtctgcct gctgcatgat ctgcgccacc
     4081 agcgtatcca ccaaagccgg gtcgatttcg ggtgctttgg ctgccgcaaa acctgccaac
     4141 attgcagcaa taactgcggc agcggtcttt ttctgtttca tggtattccc tgtcctgcgc
     4201 ggcggcaaaa cgcctgtatg aacgtcttgc cgccgtatcc cgttttcaga ttattttgca
     4261 ggtttgatgt ttgccttacc caacagcgca ccgacggcac ggtcaatccg ttccgcctga
     4321 aggttgccgg caatctgtcc tttcatttcg tcaaaagaag gcactttcac ctcgcggctg
     4381 tcgttgacat aataaacgcc gtagaaatcg ccgtttttca gcggcgttgc cgtaaattcg
     4441 ccttttttca agtccttaat tgcctgataa agcggcggaa caccctgttc caaatctttc
     4501 agcggcacat atccgtccgg cgcgccggtc cgtttggtgc ggtcgttgag cgagtattgt
     4561 ttcaaaacgg catcaaaacc ttttttcgcc ttcaaatcgg caaccgcttt tttcgcattt
     4621 tcttccttgt cggtcaggat ttcgcccaac tggacttcct gcgtgccttt ataaaaaccg
     4681 ctgatattgt cgtaaacggc ttttacttcc tgctcggaaa ccggttgggt tttggcgata
     4741 tgcagtgcgt atgcctcgcc gttcaagcca tattttaccg cctgccaaac ggttttgaag
     4801 gacggtttct tgtcgtcgcc cgactttttc gcttcggcac gcaatttggc aagcgcatct
     4861 ttaaactctg ccgaccggtc gagtttcagg cgtttcactt cctgtgcgac cacggtgttg
     4921 accacttcgt tttccagcag ggattggcgc agttgcggcg tgtcttcggc acggctgttt
     4981 tccgcacgga atgcggcaac ctgcgcatcg atgacggaac tgtcgatttt ctgaccgtta
     5041 acggttgcca gcgtttgggc aaacaggctg ccggaacagg caagcagcgc aacggaagtc
     5101 aggatttttg ctttcataat cttctctctt taaattttaa attgaaatat tcaggcagac
     5161 ttcattcagt ccgccgtatg gaaatactcg tcaggggtag ccgcccggat gccgagcgcg
     5221 tgaatcatgc cgcctgaaaa taaatctttg agcagcgatt tgaccgtttt ctgacggttc
     5281 agacggctta aaccttcaaa acggccgctg acgaccaaaa cggcataatg tccgccgccg
     5341 gtattgcccg cgtgtccttt gtgcagatgg ctctcatcgc cgatttccaa caccagagga
     5401 tcgagcgtct gcaggcgttc gcggatcaaa tcgacagccg gcattatttg aacaccgctt
     5461 taaacggctt gatcagcact tcgctgtaca cgccggcatg aacataggga tcgtcttcag
     5521 cccaagcctg cgccgcatcc aaagactcga actgtgccac aatcaagctg cccgaaacac
     5581 gttcgggatt gtccggcagc aggtttgggc ctgccgtcag cagacggcct tccgatttca
     5641 gcgtttccag ccgtttaaag tgttcgggac gtgccgccat acgcgcttca tgcacatcct
     5701 ccccgtctgt tgccagcaac ataaaatatt ccacagtcaa tcctcctttt tcagataggt
     5761 actcagataa ataccctgaa taataaagaa aaaaagcatc agcgcagtcg aaccgaacat
     5821 cttatagtta acccattgcg cttcaaacct agtaaacaca aaccagttgg caatacccat
     5881 aaaaatcaga aaaccgaccc acatatatgt caattttccc catacggcat ccggaagctg
     5941 aatctccctg ccgatactcg ctttcaagcc gtttttaccc gcaaggtggc tgcccagcag
     6001 gaataacgcc ccgcaccaga acaatactgt cggcttccac ataatgaagc ggctgtcgcc
     6061 caaaacaatg gttgcgccgc cgaatacgac aatcagcacc agtccgaccc actgcatcgt
     6121 atccagcctt ttatgcttcc aatacaggaa agccgcctga accacgcctg caaccaaggc
     6181 aaccgccgca gcggcaatca tatttttggt aacggtataa gtagcaaaaa acaagatgac
     6241 ggacaaaagg tcgctgacaa atttcatatc caaatgagaa agcaaatcaa ataaacgcta
     6301 atcatacagg cagaacccta tctttgcacc tgcaaaacca acaaattttg ttttgattaa
     6361 tgcaaatatg cacagatgtt tttgaaaaaa gatggaaata tgtcataatt tataaaattg
     6421 gctttaaaat acagcttcgg ccggaacctc tgcctatccg caccctatcg tccgtattgc
     6481 ctatgcctga tgacgaaatt tacagactgt acgcggtcaa accgtattca gccgccaacc
     6541 cacaggggat acatcttgca aaaacaacag acaaatcaaa ctgattgccg cctccatcgc
     6601 agttgccgca tcctttcagg cacatgcgcg actgggcgga ctgaatatcc ggtccaacct
     6661 tgacgaaccc ttttccggca gcattaccgt aaccggcgaa gaagccaaag ccctgctagg
     6721 cggcggcagc gttaccgttt ccgaaaaagg cctgaccgcc aaagtccaca agttggacgg
     6781 caaagccgtc attgccgttt cttccgcaca ggcagtccgc gatcccgtct tggtgttccg
     6841 catcggtgca ggcgcgcagg tacgcgaata caccgccatc ctcgatcctg tcggctgctc
     6901 gcccaaaacc aaatctgcac tttcagacgg caagacacac cgcaaaaccg ctccgaaagc
     6961 agagtcccaa gaaaatcaaa acgccaaagc cctccgcaaa accgataaaa aagacagcgc
     7021 aaactcagcc gtcaaaccgg cgcataacgg caaaacccat accgtccgca aaggcgaaac
     7081 gctcaaacag attgccgccg ccatccgtcc gaaacacctg acgctcgaac aggttgccga
     7141 tgtgctgctg aaggcaaacc caaatgtttc cgcacacggc agactgcgtg cgggcagcgt
     7201 gcttcacatt ccgaatctga acaggatcaa agcggcagca cccaaaaaaa tcaaagcgga
     7261 acaacccaaa ccgcaaacgg cgaaacccaa agccgaaact gcatccatgc cgtctgaacc
     7321 gtccaaacag gcaacggtag agaaaccgat agagaaacct gtcgaaaaac cggttgaaaa
     7381 acctgaagca aaagttgccg cgcccgaagc aaaagcggaa aaaccggccg ttcgacccga
     7441 acccaaaccc gcagtgtccg aaactccggc ttcggcgaca gaacgccaac ccggacctgt
     7501 acccgctgca aatactgccg catcggaaac cgctgccgaa tccgcccccc caagaagccg
     7561 ccgcttctgc catcgacacg ccgaccgacg aaaccggtaa caccgtttcc gaacctgttg
     7621 cggaaacagc cagtgaagtt gccgccgaac ccgttgccga acctgtcgaa caggtttctg
     7681 ccgaagaaga aaccgaaagc ggactgtttg acggtctgtt cggcggttcg tacaccttgc
     7741 tgcttgccgg cggaggcacg gcattgatcg ccctgctgct gcttttacgc cttgcccaat
     7801 ccaaacgcgc gcgccgtacc gaagaatccg tccctgaaga agagcctgac cttgacgacg
     7861 cggcagacga cggcataaaa atcacctttg ccgaagtcga aactccggca acgcccgaac
     7921 ccgctccgaa aaacgatgta aacgacacac ttgccttagg tggggaatct gaagaagagt
     7981 tatcggcaaa acaaacgttc gatgtcgaaa ccgatacgcc ttccaaccgc atcgacttgg
     8041 atttcgacag cctggcagcc gcgcaaaacg gcattttgtc cggcgcactt acgcaggatg
     8101 aagaaaccca aaaacgcgcg gatgccgatt ggaacgccat cgaatccaca gacagcgtgt
     8161 acgagcctga gaccttcaac ccgtacaacc ctgtcgaaat cgtcatcgac acgcccgaac
     8221 cggaatctgt cgcccaaact gccgaaaaca aaccggaaac cgtcgatacc gatttctaca
     8281 acaacctgtt ctcaaacaac catatcggca cagaagaaac agcttccgca aaacctgccg
     8341 caccctccgg actggcaggc ttcctgaagg cttcctcgcc cgaaaccatc ttggaaaaaa
     8401 cagttgccga agtccaaaca ccggaagagt tgcacgattt cctgaaagtg tacgaaaccg
     8461 gtgccgtcgc ggaaactgcg cctgaaacgc ccgatttcaa cgccgccgca gacgatttgt
     8521 ccgcattgct tcaacctgcc gaagcaccgg ccgttgagga aaatgcagcg gaaatcactt
     8581 tggaaacgcc tgattccaac acctctgagg cagacgcttt gcccgacttc ctgaaagacg
     8641 gcgaggagga aacggtagat tggagcatct acctctcgga agaaaatatc ccaaataatg
     8701 cagataccgg tttcccttcg gaatctgtag gttctgacgc gccttccgaa gcgaaatacg
     8761 accttgccga aatgtatctc gaaatcggcg accgcgatgc cgctgccgag acagtgcaga
     8821 aattgctgga agaagcggaa ggcgacgtac tcaaacgtgc ccaagcattg gcgcaggaat
     8881 tgggtatttg attcccaact gccctttcgc agatcaagga ttccgtttca gacggcatct
     8941 ttttttgcct tatcggtgta acggataaag tttgaaccgg cacaggctca aacagcaggc
     9001 cgtcggcaac aaaatgccgt ccgaaacccc taaaggcttc agacggcatt ggcggcggcg
     9061 gtatcaggta ttcgcatagg caaccgaatc gtcgccgctt ttcttttgaa cgaactcgat
     9121 tttgcatccg tcggggtctt cgacgaaggc tatcacggtt gtgccgtgtt tcatcagacc
     9181 ggcttcgcgg acgacgtttc cgccctgccg cttcacgcgt tcgcaggctt cgtaggcatc
     9241 gtccacttca acagcgatgt gtccgtaggc gttgcccaag tcgtatcgtt ccgtatccca
     9301 gttgtgcgtc agttccaaaa ccgtgctgtc ggtttcgtcg ccgtaaccga cgaaggcaag
     9361 ggtaaatctg ccttcgggat agtcttttcg gcggagcagt ttcataccca aaacgttttg
     9421 gtaggaatcg agggattttt cgagattgcc cacgcggagc atagtatgga gtaagcgcat
     9481 ttttcgtgtt cctctcggtg gtggttaaac ttcgatttta ttcggcgtaa acgtctgcca
     9541 tttgttgcag gcgggacagt gccagaaaaa gacttgggat ttgaagtggc agttgcggca
     9601 acggtacatc acgctgcgct ggagctgccg tccgataacc gaacgcatca tgtcggcatc
     9661 ggctttccaa gccggatcca aatcgctgag tttcaaaccg agcaggcggt acacgccgtt
     9721 aaggtcgggc ttgcggcgga caagctcgac ggcggtttgc gcggcttctt tctcgccctt
     9781 aagcagcagg gatttctcgt acacgacatt gatcaggtca agttcgggaa acgtctgcat
     9841 atatcctgtc agacggttca agccttcttc aggttttccc tgcgcggcat aggcttcgta
     9901 aagcttctcg ccgaccatgc tcaagtatac atggttttgc tgctcgatgg cggcataggc
     9961 ttcgacggcg gcagggaaat tgccttgtcg gtgttcaatg tcgcccaaaa tcatgttggc
    10021 gcgggtgcat tttttgttgg cttcgagtgc cttgccgaca ttgaaacgcg cggcatcgaa
    10081 attggacttg aacagcgcgg cttgggcaag ttcgcaataa aactgtgcaa tctcaaactg
    10141 atatgtctgt tcgtcgtgac taagaagttg ggcggtttca accgcttttt cccaatccct
    10201 gtcctgctgg tagatattga gcaggtgctg tctggcttca cgcgccattt caccgtcttg
    10261 cagccccaaa aaaatctgtt cggcacgatc gaccaaaccc gcgctttggt agttttgcgc
    10321 caattcaaac aggacgcgcg cgcgcttttc gccgaccgta tcgggagaat cgagcattgt
    10381 ccggtgtatg ttgatggctt tgtcgttttc gccgcgctga cggtaaagtt tgccgagggt
    10441 gaggttcaaa tcatacgatt gcggccggcc gtcgacgact tccgccaact cccttgccgc
    10501 gcgcccgctg ttgcggtcga ccaaagcgtc caggctttta taaaatcccg aagggatgct
    10561 ttttgcctgc ttcaatacgg ttttcatatc cacgcgggcg gcaaaccagc ccatcgtgaa
    10621 gaagacgggc aaaaggataa tcggcagcag gataatccac aattcgttgt ccatatcggc
    10681 tttcttaagg ctgtttggca gattcggcag cattttgtat cggcggtgca gtcaatttct
    10741 gtccgctcaa gcgcgcactt ttcttcactt ccgcacgcag gcggctgttt tcgccgcgca
    10801 aggacagcag ccgcccgaac agggcaaaca ttccgaacac gatgccgacg acaaacgcgc
    10861 cgaacaatac gacaatcagc ggcagattgg cactctgccc cggaagatag gaaaaggtaa
    10921 cggcatccat attaatgacg gcaagcagca ggaagagcag caggataatg attttgatga
    10981 cggtatagat aagtttcatg tttgctccgt aaataaaaac gccgcacgga cagcttcgca
    11041 ctctgaacca agattgcgtt agtttaaacg atttgcacgg tttcggatag aatgcggcag
    11101 cgtgttcgga cggcatacgg agtatgcgat tgccgacaat tttaccaaat acaccgctcc
    11161 tttccatttg aaaaataacg gattggacac cgcatcgaca gaaaaacccg ccgcgcactt
    11221 gtcaaaaccc tgtttgcagg cgtatcttta caaccttcaa attcaaaccg ttcattgaaa
    11281 catatcagaa taagaaaggc tttacatcat gagcagaccc gtacccgccg tattcggcag
    11341 cgtttttcac agtcaaatgc ccgtcctcgc ctaccgcgaa ggcaaatggc agccgaccga
    11401 atggcaatct tcccaagacc ttacccttgc acccggcgcg catgccctgc attacggcag
    11461 cgaatgcttt gaaggtttga aggccttccg tcaggcagac ggtaaaatcg tgctgttccg
    11521 tccgaccgcc aatatcgcgc gtatgcggca aagtgcggac attttgcacc tgccgcgccc
    11581 cgaaacccaa gcttatctcg atgctttggt cgaactggtc aaacgtgccg ccgacgaaat
    11641 tcccgatgcg cctgccgcgc tgtacctgcg cccgacctta atcggtaccg atcccgttat
    11701 cggcaaggcc ggttctcctt ccgaaaccgc cctgctgtat attttggctt cccccgtcgg
    11761 cgactatttc aaagtcggct cgcccgtgaa aatcttggtg gaaaccgaac acatccgctg
    11821 cgccccgcat atgggccgcg tcaaatgcgg cggcaactac gcttccgcca tgcactggtt
    11881 gctgaaggcg aaagccgaat acggcgcaaa tcaagtcctg ttctgcccga acggcgacgt
    11941 tcaggaaacc ggcgcatcca actttatcct gattaacggc gatgaaatca ttaccaaacc
    12001 gttgacagac gaattcctgc acggcgttac ccgcgattcc gtgctgactg tcgccaaaga
    12061 tttgggctat accgtcagcg aacgtaattt cacggttgac gaactgaaag ctgctgtgga
    12121 aaacggtgcg gaagcgattt tgaccggtac ggccgccgtc atctcgcccg ttacttcctt
    12181 cgtcatcggc ggcaaagaaa tcgaagtgaa aaaccaagaa cgcggctatg ccatccgtaa
    12241 ggcgattacc gacatccagt acggtttggc ggaagacaaa tacggctggc tggtcgaagt
    12301 gtgctgatgc tttaaataaa aaaatgccgt ctgaaacccg tttggcgttt cggacggcat
    12361 tttcgcgttc ggaccgtttc cgccgcacct gcagcaagtc ggtacaaagg caatcggtta
    12421 aaacaagcgt ccgcatttcc catcccgcct gccgcaagtc gggcatttcc ctggaaatac
    12481 gcttcaaacg gcaaaccgcc gcccgaaacc gatactcggc acggacggcg cacggatttg
    12541 aaaacggcgg attatccctc ggtgctcaag gcattgatgc tgtaaccgcc gtcaacataa
    12601 gtgatttcgc cggtaatgcc ggacgacagg tcggacagca ggaaggcggc agtattcccg
    12661 acttcttcga tggtaacgtt gcggcgcagc gggttgtggg cggcgacgtg tcccaagagt
    12721 ttgccgaaat cggcgatgcc ggaggcggcg agcgttttga tcgggccggc ggaaatgccg
    12781 ttgcagcgga tgccctcttt acccagacag gcggcggtaa agcggatgcc tgcctcaagg
    12841 ctggcttttg ccatacccat cacgttgtaa ttcggaatcg cgcgtaccgc gcccaagtag
    12901 ctaagggcga cgatggcgga gtttctgccg cgcatcatcg gacgggcggc ttttgccaat
    12961 gcgggcaggc tgtatgcgga aatttcgtgt gcggtgttga acgcttcgcg gctgatgctg
    13021 tcgaggaagt cgccgctcaa ggcttctttc ggcgcgaagc cgatggaatg caccaaaccg
    13081 tccaagccat cccaatgttt gcctaagtcg gcgaacactt ggttgatttc gtcgtcgctg
    13141 gcgacatcgc agcggaatac gagttcggaa tctaattccg ccgccatttt gcggacgcgc
    13201 tcttccagtt tgtccacaac gtaggtaaac gccagttccg cgccctgttc gcggcaggct
    13261 ttggcgatgc cgtaagcgat ggaacgctcg gaaatcatgc cggtaatcag aatttttttg
    13321 ccttgcagaa aacccatttt gtatccttca aatagtgttc ggttcgttct aaaccgttga
    13381 ttatagcaaa ttgtccctgt ttctgtgttt tcacgttgca gcgtgcagac ggcaatgccg
    13441 tccgaagcgg atttcagacg gcattggacg tttcaaatac ggtttaaggc atcagatgcc
    13501 gcgcaagagt tcgttcacgc tggttttggc gcgggtttgc gcgtccacgc gtttgacgat
    13561 gacggcacag taaaggctgt ggctgccgtc tttggaaggc aggctgccgg acacgacgac
    13621 cgaacctgcc ggtacgcggc cttggtagat ttcgcctgtg gtgcggtcga agattttggt
    13681 ggattgaccg atgaacacgc ccatcgaaat cacgctgcct tcttcgacaa tcgcgccttc
    13741 gacgatttcg gaacgcgcgc cgatgaagca gttgtcttca atgatggtgg gtgcggcctg
    13801 caggggctcg agtacgccgc cgatgccgac accgccgctc aagtggacgt ttttgccgat
    13861 ttgcgcgcaa gagccgacgg tcgcccaagt atcgaccatc gcgccttcgt cgacgtatgc
    13921 gccgatgttg acgtaagacg gcatcagcac ggcgtttttg gcaacaaagc tgccgcgtcg
    13981 ggcaaccgca cccggaactg cgcggaagcc tgcgtttttg aactcgtctt cagaccagtc
    14041 ggcaaatttg gtcggcactt tgtcgaagta tttgttcacg ccgtcgttga ggacttcgtt
    14101 gtcttggatg cggaaggaca gcaacacggc ttttttcgcc cattcgttga ctttccactc
    14161 gcccacgccc aagcgttcgg cgacgcgcag tttgcctgaa tcgagttggc ggatggtttc
    14221 caacacggct tctttgactt cgggggcaac ggtggtcgga gtgatgtccg cgcggttttc
    14281 aaaggcggtt tcgataatgt tttgcaaaga cataatgttt ccttggttcg agatatttcg
    14341 ggacgcttgc cggtattgtt cagacggcat ggcggttgga acaaacgtgc tattgtgcca
    14401 tacaaacgcc cgcccgtcag ccgcgccgca ggcttgccgg atgccggcgt ttcggaatcg
    14461 ggcgggcggc aggcatatgt ctttttccgc gcccgaatca atacagaaag gcggcggtac
    14521 ttttatgccg cgccgccgcc tttcagacgg cattcgcggt aaaacgccat cagcccttcg
    14581 gtcgaggcat cgtgtacgga cgtgccgcct tccaattcgc cgatgatggt ttttgccaac
    14641 tgtttgccgt actcaacccc ccactgatcg aaggggttga cgttccatat cgcgccttgg
    14701 acgaaggttt tgtgttcgta agccgccatc agcataccca gattgcaggg cgtgaggcgg
    14761 tcgagcagga tgctgttgct ggggcggttg ccggggaact ctttgtgcgg cgcgaggcgt
    14821 tcgcgttccg cttcgggcaa atctgccagt tcggcgcgtg cttcgtctaa ggttttaccc
    14881 ttcatcaggg cttccgcttg ggcaaaggcg ttggcaacgg taaaacggct gcgtccgtcc
    14941 tccgcgccct gcgccgtcat cgggacgata aagtcgcagg gaatcaggcg cgtgccttgg
    15001 tggagcagtt ggaaataggc gtgctggcag ttgacccctt caccgccgaa cacgatgccg
    15061 cccgttttgc acgcggcggg actgccgtct gaagcgcggc ttttgcccaa actctccata
    15121 tcgagctggt tcagccacgc cggcagcagg cgcaggttgt ggctgtacgg aacggcggtc
    15181 tgcccgtccg cgtgctggaa attgttatac cacacggcaa tcagtgccat cagaacggga
    15241 atgttgcgac gcgggggcgt gtggaaaaaa tggctgtcca tcgcgtgcgc ccccgctagc
    15301 agttcgcgga aacgcgcccc gccaaccgca accatcacgg gcaaaccgac gggcgaccag
    15361 acggaatagc gtccgcccac ccagtcgtac atcgcaaaca cgcgttccgc cgcaatgccg
    15421 aaactttgcg ccgcttccgt atcggcagac accgcgcaaa aatggcgcgc cgtttcggat
    15481 tccgagaacc ccgcaccgcg ataccacgcc ttgaccgcct ctgcattgag cagggtttcc
    15541 ggtgttttaa aggacttgct ggcaacgcaa aacattgttg tttcggggtt cagacggcat
    15601 aagacctcat ccaggcaggc agggtcggca ttagaaacaa aatggacgga aatctgccgt
    15661 ctgaacggct cgagcgcctg cacgcacatt gccggcccga ggtcggatcc gcctatgccg
    15721 atgtggacaa aatccgcaat ccgttttccg gttatcccct gatataaacc gtcgtccaaa
    15781 ctgtgtgcaa acttcaacgc acgatttaac tcgcggcgga tttcgggcaa cacgtccctg
    15841 ccgtccgcat aaacggcatc cgcaccgtcg ggcaggcgca aagccgtatg cagcgcggca
    15901 cgcccctcgc tgccgttgac tttcgcaccc gtccgcaaag cacgcatttt cccttccaaa
    15961 tccgccgtct ccgcaagacg gcagagcagt tgcagcgtat cttcgccaaa acggtttttg
    16021 ctgtaatcga acaacatccc gtccaaacgc tcatgcatac gctcaaaacg gtcgggttcg
    16081 gcagcaaagc ggtcgcgcaa aaggatgtgg cacgtatcct gataatggcg ttcgagcgca
    16141 taccatgcac gggtaaaggc atccatctgt tttccttgat ttttcagaac cggattaaaa
    16201 tatagcagaa tgtagtctaa caaacggcag acactttagc gaatctcagg aacaccgccc
    16261 gccgcgtcca ataacacctt atttccatat ggcgaaaata tagtgaatta acaaaaatca
    16321 ggacaaggcg gcgggccgca ggcagtacgg atagtacgga accggttcgc ttggtgcttc
    16381 atcaccttag ggaatcgtcc tctttgagcc ggggcgggcc aacgccgtac cggtttttgt
    16441 taattcacta taccctccgg ccggcatttg acccgcaaca atatcctgca agatttattg
    16501 tgtacgcata aatgccggac agccgcctaa attaaggtat aatcgcatcc gattctgtcc
    16561 cgtttgccgc ccgcaggcgg gatgtcggcg gttttcatct taccgggaac acgccgatac
    16621 tgttttttaa cgatgtttct tacattttat tccaattact ttacggggct agaatatggc
    16681 taaaaatggg ggattttctt tgttcgcaaa gaaagaaaaa cgctttatct ttgaaggcag
    16741 gcattctgcc tccgacaaac tggtcaacgg cgaagtatcc gcgtttaccg aagaagaggc
    16801 acgcaaaaaa ctggcaaaac gcggcatccg cccgttgcag attacccgtg tgaaaacaag
    16861 ctccaagcgc aaaatcacac aagaagacat taccgttttc acccgccagc tttccacgat
    16921 gattaaagcg ggcctgccgc tgatgcaggc atttgaaatc gtggcgcgcg gacacggcaa
    16981 cccgtctatg acggaaatgc tgatggaaat ccgaggccaa gtggaacagg gcagctcgtt
    17041 gagccgcgca ttctcaaacc acccgaaata tttcgaccgc ttctactgca acctggttgc
    17101 ggcgggcgaa acgggcggtg tattggaaag cctgctggac aaattggcaa tttacaagga
    17161 aaaaacccag gccatccgca aaaaggtaaa aaccgcgcta acctatccgg tatccgtcat
    17221 cgccgtcgcc atcggtttgg tattcgtgat gatgattttc gtactgcccg cctttaaaga
    17281 agtttacgcc aatatgggcg cggagcttcc cccactgacc caaacagtga tggatatgtc
    17341 cgactttttc gtctcatacg gctggatggt gctgatcgca ctgggctttg ccatatacgg
    17401 cttccttaaa ttgaaggcgc gttcgattaa aatccaacgg cgtatggatg ccatactgct
    17461 gcgtatgccg attttcggag acattgtccg caaagggacg attgcccgct ggggcaggac
    17521 gacggcaacg ctgtttgccg ccggcgtgcc tttggtcgat gtattggact ccactgccgg
    17581 cgcggcgggc aatttaatct atgaagaagc cacccgggaa atccgtacgc gcgtcatcca
    17641 aggtctgtct atgacttcgg ggatgcgtgc gacggaactg ttccccaata tgatgttgca
    17701 gatgtcctcc atcggcgagg aatcgggttc tttggacgat atgctcaaca aagccgccga
    17761 attttacgaa gacgaggtgg acaatgcggt cggcaggctg tccgctatga tggagccgat
    17821 tattattgtg attttgggct tggtcatcgg tacgcttctg gtcgctatgt atctgccgct
    17881 gttcaacttg ggcaacgtgg tcgcctgatt tgccgcacag atccggcgcg gattggttct
    17941 gcgccggttt gtttttgctt tgaatatatc aaggacaaaa tatgtctgat ttgtctgtat
    18001 tgtcgccgtt tgccgtgcct ttggcagcag ttttggggct gctggtcggc agcttcctga
    18061 atgtcgtcat ttaccgcgta cccgttatga tggaacgcgg ctggacggta tttgccaaag
    18121 aacatttaaa cctgccgctg accgacgatg aaagccgtac cttcaacctg atgaagccgg
    18181 attcctgctg tcccaaatgc cgtgtgccga tacgcgcgtg gcagaacatc ccgattgtca
    18241 gttacctgct cctgcgcggc aaatgcgctt cctgccaaac caaaatcagc atacgttatc
    18301 ccttaatcga gctgctgacc ggcgtattgt tcgggctggt cgcctggcaa tacggctggt
    18361 cttggattac gctgggcggt ttgatactga ccgcgtttct gatttccctg acctttatcg
    18421 atgcggacac ccaatacctg cccgactcga tgacattacc cttgatctgg ctggggctga
    18481 tatttaattt ggacggcggc ttcgtgcctt tgcagtctgc cgttttaggt gcggttgccg
    18541 gctatagttc attatggctc ttatgtgcag tgtataaact gctcacagga aaaaccggta
    18601 tgggcaacgg agatttcaaa ctgattgccg cattgggcgc gtggctcggc atatccgcat
    18661 tgcccgtgct gatttttgtt tcctctctga tcggtttggt cgcggcaatc gttatgcgcg
    18721 tcgccaaggg gcggcatttt gccttcggcc ccgcactgac agtttcgggc tggataattt
    18781 ttacggcaaa cgattccgta tggcgggcgg tcaactggtg gctgacccat ccggtgagat
    18841 gacagcatgg gtcggactga ccggcggaat cggcagcggc aaatcggcag ccgcgcaata
    18901 ttttgccgat ttgggcgtgc cgcgcatcga tgcggacgcg gcggcgcact cgctgacggc
    18961 ttcagacggc atcgccctgc cggaaatcag gcggctgttc ggcgacaccg ttttcgacac
    19021 acagggtttg ttgcggcgcg acatattgcg taaagaaatc tttgcctccc catcgcgcaa
    19081 agccttgctc gaatccgtga tgttgccgct gattttctca gaaatcaaaa aacagcaaga
    19141 aacctttacc gatgcggttt acggcattgt cgaaattccg ctgctgacgg agaagcgtca
    19201 atttatcagc ctgatacggc gtgtcctgac cataagcgca cctttggaaa aacgtatcgg
    19261 cagggtaatg gcacgcagcg ggctgacgcg cggcgaggtg gcggacatca tcagccatca
    19321 ggcatccgaa tccgaacgcc tgctgcttgc agacgatgta ctgctcaatg acggcagcct
    19381 caaaagccta cgtgagaaaa caatgctcct gcacgcgttt tattcaggga ttttcgcctc
    19441 aaaaccaaca caaggaaaac acaatggctg aatcgcggca aacacgcctt caagtcaaat
    19501 gtccgacctg tcaaacggca gtagtatgga aaccggaaaa cgcattccgc ccgttctgtt
    19561 cgcaacgctg caaactgatc gacttgggcg gatgggcaga cgggaaatat acggtttccg
    19621 gtcaaacgga aagtttgccg gaaatatccg aacccgacgg ggcataccgc tgaccgcccc
    19681 gccttcccgg caaacaccct gaaaggtcaa atgccgtctg aaacaaacac gcttcagacg
    19741 gcattttcat tctcaaacct aatcgttggt atttgccgtt acctcttcca atgaagtaat
    19801 gccctgcata attttcaaaa taccggcccg gcgcaaatcc accataccct ccttataggc
    19861 aacgtccaaa atacccactt ccgtaccgtt gttcataatc acacgctgca tttcttcgct
    19921 gatgggcata acctcataca cgcccgcacg ccccttataa ccctgccccc ggcaacggtc
    19981 gcaaccgacg gcgcggtaaa gtttccaatc ttttgcaaga tcctcatcgg tgaaaccgac
    20041 ttccttcaaa gcagaggcag acgggcgttc cacttcctgt ttgcagctcg aacacagcct
    20101 gcgtaaaaga cgctgcgcca taatcaggct gaccgaactg gcaatattaa acggcgcgac
    20161 acccatattc agcatacgcg acaacgtcgc cggcgcatta ttcgtgtgca gtgtggaaaa
    20221 caccatatgc cctgtttgtg ccgccttaat cgcaatatcg gcagtttcca aatcacgaat
    20281 ctcaccgacc ataatgatgt ccgggtcctg acgcaggaaa gacttcaaag cagcggcaaa
    20341 agtcagaccc tgcttatcat tgacgttaac ctgattgatg cccggcaggt taatctcggc
    20401 agggtcttcc gccgttgcaa tatttaccga ctccgtattc aaaatattca aacaggtata
    20461 gagcgacacc gtcttacccg aacccgtcgg gccggttacc agcaccatcc cgtaaggacg
    20521 gtgaatcgct tccaacaaca attttttctg gaacggctca aaaccgagct ggtcgatgtt
    20581 caaagacgcg gcatcggaat tcaaaatccg catcacgacc ttttcgccaa acagcgtcgg
    20641 caatgtgctg acacggaaat cgacaggctt gccgcccttt tgaaaggtca gctgcatcct
    20701 accgtcctgc ggtatccgtt tttcggaaat gtccaaacgc gacattacct taatccggga
    20761 agcaagctgc ccccttaccg caatgggcgg ctgaaccacc tcgcggagct gcccgtccac
    20821 acggaaacgg atacgcgcat tgtgttcgta aaactcgaaa tggatgtcgg atgccccgct
    20881 acgcaaggca tccgacaaag ttttatggat aaacctcgga acagggccgt cttctgcctc
    20941 ctcgttgtcg atatacaggg tgtggctttc ctcttcctct tgcccctccc caagctcctg
    21001 aagcagcgat gtcgaacgcg aacccaccca atcgagcaaa cccgccaact ggtcatcctc
    21061 gacaatgacc aactcaaccg caatccctgc ggcagaaacg gttttctgaa tttgcggcat
    21121 ctgggtcgga tcggaaaccg caaaaaatac tttgtcgccc cgacggaaaa ccggcacaca
    21181 gtggaactcc accatctgct cctccgtcaa cacccccatc agcaccctgt ggcgcggata
    21241 atgacgcaaa tcaagaatcg aataactgaa caccctcgca atcaatgccg caagcgactt
    21301 gggcgaaatg acaccgtctg aaaacagcat cggcaacact tccttacccg cctgcgactc
    21361 attgtagtaa tgctcggcct gctcaacagt aaccacctgg ttttgaacca gaatcctcag
    21421 caaacctacg ctcatacgac cttatcccca aatttattca ttgttatacc tgtacagatt
    21481 ttatcataaa acaacagatt tccaagcctg aacatctttt acgaagcctg aaaatcattt
    21541 cacgattctg ccgtcctaaa ggtcggtttt tcaagcagga agaaaaagtt ttcagatggc
    21601 aaaaaagccc tccagcactg aaaggcctta tatcggaaac ttcccgcaac acgggaaaca
    21661 gacaaatgca aaccgtcaaa cctcgccaac aggaatcgaa cctgtatttt acgcttagga
    21721 ggcatacgtt ctatccgttg aactatggcg agccgaaatg aaaagggaga ttttaaacct
    21781 ttccggcaac aaaagacaag atgtcggccg caatcagcgg cccgacaggg ataccgccca
    21841 taaatgccac cccgatgacc gtaccgatca gcaagcccgt taccaatacc ggctgccgtc
    21901 ccatcaaagg cacgccgcat cccgccagcc aagccacgaa aataccgata aaaacggcgg
    21961 atatcatttt aaaattcaaa aattcggcaa caggaggaac ctgcgccttt cctgaaacca
    22021 acggactcaa aacccctatg gtcaaaagaa tgataccgag gttcaacccg tgcttctcga
    22081 ccaacgggac aaactgtacc aatgccgtct gctgcatcag cagcaatatg gttgccgaga
    22141 cggtaatcga attgttgttg ctgaccaccc ccaacagaat cagcgtaacc agaaacaggg
    22201 gaacaaaact gaaattcatc ggttacgaca ccctgaccaa agattccttc gccagctgaa
    22261 tcatagcatc cttcacttcg ctgtcggaca gggcatccaa cgcggcaacg gcacaatcga
    22321 ctgctttgcg cgcctcgcct atcgaatatg ccaaagcatc cgaacggacg acataatcgc
    22381 ggattttttc aaaatagccg cgatctgcat tttccaaagc agtacgcaca tcgttcgcaa
    22441 cctgttcgga accctgacgc atcagataaa tcaaaggcag ggtcggtttt ccttccgcca
    22501 aatcgtcgcc gacgttttta cctgtttctt cggtttcccc cgaataatcc agcacatcgt
    22561 caataatctg gaatgccgta ccgacgtaca taccgtagtc tttcaaggcc tgttcgtgcc
    22621 cgggggaagc tttgcccaaa attgcgccga cttgagcggc agcttcaaac aattttgccg
    22681 ttttatattg gatgactcgg atatattgtt cttcggtaat gtccgtattg ccgatgttca
    22741 tcagctgcat gacctctccc tcggcaatga tgttggtcgc atccgccatc acttccaaaa
    22801 cgcgcatact gcccgaggca accatcagtt gaaatgcacg ggtatataaa aagtcgccaa
    22861 ccaacactgc cgccgcattg ccgaacagat tgtttgccgt tgcccgccca cggcgcaaat
    22921 cgctttcatc gacgacatcg tcgtgcagga gtgtggaagt gtggataaac tcgaccatcg
    22981 ctgccagcga atacagtttc tcgtcatcat aaccgaccgc cttacccgcc aaaatcgtca
    23041 taatcggacg caggcgtttg ccgcccgcgc tgatgatata tgtaccgatt tgcgaaatca
    23101 gtgcgacatc ggattgcacc gcacggttga tgacttcatt gactttggca aggtcttcag
    23161 gcagatgtcg ctggaaatag ggcagattct cgagcatggc agactctcag gtttacgttt
    23221 ccgtcaaacg gcagataccg cttgaaagct gattcaaata gcgggcaatt atatcagcaa
    23281 agccatcagg gtacatcttt tcagacggca tatgattgcc cgaaccgcgc aaactttgac
    23341 aaaacaggca aataacaata caatgcccaa tttcgcacaa tggtgtgcgg atattaacca
    23401 taacccttat ggagttgagt atgtacgcgg tcgtaaaaac cggcggcaaa cagtataaag
    23461 tttccgtcgg cgaaaaattg aaagtagaac agataccagc ccaactcgac agccaaatcg
    23521 aactgaccga agttttgatg attgctgacg gcgaatctgt aaaagttggc gcacccttta
    23581 tcgaaggtgc aaaagtaacg gctaaagtag tggcacacgg tcgtggcgaa aaagtccgca
    23641 tcttcaaaat gcgccgccgc aaacactacc aaaaacgcca aggccaccgc caaaatttta
    23701 cccaaatcga aatcgtggca atcgcctaac cttaaaactt aggagcatta caaatggcaa
    23761 gtaaaaaagc aggcggcagc acccgcaacg gtcgcgattc agaagccaaa cgcttgggcg
    23821 ttaaagccta cggcaacgag ctgattcccg caggttccat catcgtacgc caacgcggta
    23881 ccaaattcca cgcaggcgac aacgtaggta tgggcaaaga ccacactttg ttcgccaaaa
    23941 ttgacggtta tgtcgaattc aaaaccaaag gcgcgctgaa ccgtaaaact gtcagcatcc
    24001 gtccttacac cggttctgaa gaataattca accgatacct gaagccgcat cttttcacga
    24061 tgcggctttt tacatacccc atacccgatt tgatacacat taagctgaaa gtaaaaatcc
    24121 gcatacaccc tcccctgcat atttcttcaa caacgggttt tgatataatc gcctatctgt
    24181 tacagatagt tcaaacggca ttcaaaccct tacaaatgcc gtctgaaatc atcggcatcc
    24241 gcctatgcaa aggatatttt atgagtttac acagcgacat cctcgtcgtc ggcgcaggcc
    24301 cggcgggttt aagttttgca gccgaacttg ccggcagcgg tttgaaagtt actctgatcg
    24361 aacgcagccc actgactgtt ctgcaaaatc ctccctatga cggacgcgaa atcgccctga
    24421 cccatttttc ccgcgaaatc atgcagcgtt tgggtatgtg ggacaaaatt cccgaaaacg
    24481 aaatctaccc cttgcgcgat gccaaagtgc tgaacggacg ttccgactac cagctccact
    24541 ttccccaacc gactgaagcg cgcggcgagc ctgccgactg tttgggctat ctgatttcca
    24601 accacaatat ccgccgcgcc gcctatgaag tcgtatcaca actcgacaat gtcagcattc
    24661 tgaccgatac ggccgttaaa gaagtcaaaa catctgataa tgaagcgcaa gtctttttgg
    24721 aaaatggaga cattctaacc gcgcgtctcc ttttggcagc agacagccgt ttctcacaaa
    24781 cccgccgaca actcggtatt tcttcagata tgcacgacta cagccgaacc atgttcgtct
    24841 gccgcatgaa acataccctt tccaaccaac ataccgctta cgaatgcttc cattacggac
    24901 gcaccatcgc actgctgcca ctggaaaagc gcctgaccaa taccgtcatt acagtcgata
    24961 ccgataaaat caacagcgtt caaaaccttt cgcccgaaga attggcggca agcgtaaaag
    25021 aacagctcaa gggcaggctc ggcgacatgg aactggtcag cagcatccac cattaccccc
    25081 ttgtcggcat gattgccaaa cgtttctacg gcaaacgcag cgcgctgatc ggcgatgcgg
    25141 ctgtcggtat gcaccccgta acggcacacg gcttcaacct cgggctttcc agcgcggata
    25201 ttctggcaaa actgatactc gaagccgaac agcgcggtca agacatcggc gcggcttcct
    25261 tgttggaaaa atacagcagc aaacatatgc tgcacgccca tccgctttat cacggcacca
    25321 atatgatgct gaaactgttt accaacgaaa ccgcgccggc aaaactgttg cgcggtttgg
    25381 tattacgagc cggcaacaac ttcccgccgc tgaaaaagct gattaccaaa caactgaccg
    25441 gttgaaaact gccgaaatgc cgtctgaaac gtttcagacg gcatttttgt attatgaacc
    25501 gttttgcggt ttccatatcc ttggcagacg gtttgcagca gattcgcata cggcagatgt
    25561 ttcaagcaga aaggaaacac aataaaaata aaaaagcctc cgaacagtcg gaggctttgc
    25621 tttcaaactg aaattatttc agtttggttt ctttgtacac tacgtgtttg cgggcaaccg
    25681 gatcgaattt tttgatttcc agtttgccgg gcatagtgcg tttatttttg gtagtggtgt
    25741 agaagtggcc agtacctgca ccggattcca gtttgatttt atcgcgcatt gcagtaatcc
    25801 ttaattaaat agtgtttaaa ttaagcttcg ccgcgagcac gcaaatcagc caatacgaca
    25861 tcaatgccta ctttgtcgat ggtacgcaat gcagcgttgg aaacgcgcag gcgaacccag
    25921 cggttttcac tttctaccca aaaacgacgt gattgcaagt tgggcaaaaa acggcgtttg
    25981 gttttgttgt tggcgtgcga tacgttgttg ccggacatcg ggcgtttacc ggtcactttg
    26041 caaactcgtg ccataatcag tctccaaact tctaaaatag taaaacgcga tttataccac
    26101 gaaaaacaat gccgtttcaa gtgttttaaa gaaaaacaga tgttttgcgc gggtaagccg
    26161 cccgagtgcc gcatctgcgg aacgtttgca ggtgcgaaac agatggggcg cgattatagc
    26221 ggatttcggg agcttctgca ttcaaaatgc cgtccgaaca tatttccagt attttcagac
    26281 ggcatttcaa gttttcaaat ccctcaatgt ccaccgccgc cgctgtggaa cggcggtttc
    26341 gccagccaga caatgggaat caggacgata aacaaaatgc tgccggcgag gaatatttcg
    26401 ttcgatccga tgatgaagcc ctgttgcgta atggtattgt tgatgatgcc tagagtttga
    26461 ccgtcggaaa tgccttgttg ggacaaatgc gccgccgttt cgtgcaatgt tgcggaatag
    26521 ggcgtgatgt gttcggcaaa acgcgtgtgg tgcaacgctt cgcgccgttc ccacagggtg
    26581 ctgacgacgg atacgccgac accgcccatc agcacgcgca ggaaattcga caggctgccg
    26641 gcggcggcaa tctgtccgcc cttcatgtgc gacagtgtga tggtggtcag cggcaggaag
    26701 aacatggcaa cgcctacccc ctgccaaaac tgcggccaga tgacgttgcc gatatccatg
    26761 tcggcataaa aatcagtgcg ccaataaaaa gtgaaggcaa aggtcaggaa gctggcggtt
    26821 acgagcaggc gcatatcgat tttattgccg aacctgccga ttaacggaga taggaagacg
    26881 gggaggatgc cgacgggcgc ggcagcaagc cctgcccacg cggaggtata gcccaagttg
    26941 gtctgcaaca ctaacggcag cagggtcagc gtccccatat acaccatgaa acccaacgag
    27001 gtggcaatta cgccgacggt aaaattccga tctttaaaca gcgataaatc gacaatcgga
    27061 tatttttctc ccaattccca aacaataaaa tacgacaagc acaccagcgc ggttatgccc
    27121 aaggtaatga tttctccaga ggcgaaccag tcaagttcct tacccctgtc cagcatcatc
    27181 tgtaacgcgc cgataccgac catcatcagc gtcagcccga catagtcggt cggcgttctg
    27241 acggttgccg tttcgcggtg tttcaaatgt ttccatgtaa tccatgccga tatgatcccg
    27301 atggggatat taatgaagaa aatccaaccc caatgccagt ttccggaaat ccaaccgccg
    27361 agtatcggcc cgaggacagg ggcgacaacg acggtcattg cccacaatgc cagtgccagc
    27421 atccgttttg cgggcggata ggatgccatt aacaggcttt gcgacagggg aatcaacggc
    27481 ccggcgataa agccctgcaa aatgcggaaa acaaccagcg actgaaggtt gggcgcgatg
    27541 ccgcacagcc acgatgcgat gacgaaaccg gcggcggcgg cggtaaacaa tttgacctcg
    27601 ccgatacgtt ttgccaaaaa gcccgtcagc ggcacggaaa cggcgtttgc cacggaaaaa
    27661 gaagtgatga cccacgtccc ctgcgtggtt gccgcaccga ggttgccggc gatgacgggg
    27721 acggcgacgt tggcgatggt cgtatctaaa acctccataa atacggcaag ccccaaagac
    27781 agcgtaaccc acgccaatgc cgcaccctta agcggtggat aatccattgt gtcctccgtt
    27841 tcagacggca tcagggcgcg gattgcccga ggatttcatc gaccgtccga tcgacttccg
    27901 accagtcggt actttccatt tccggcaatg ccgcacccgg cgtttttgaa acaggcgcgc
    27961 ctgcggcgga agtatccact ttaaccgtca tcgacaaacc gatacgcaac ggatgcctgt
    28021 ccacatcttc gcggttcagc acgatacgga cggggacgcg ctgcaccact ttaatccagt
    28081 tgcccgttgc gttttgcgcc ggaatcagcg aaaacgcgct gcccgtacct gccgaaaacc
    28141 ctgccaccct gccgcgataa acaatttgtt tgccgtacaa atcggacacc agctcggcag
    28201 gctgtccgat tttcatatgc cgcaactgcg tctctttaaa attggcatcc acccacacat
    28261 ccgacagcgg caccaccgcc atcagcggcg cgcctgccgc cacctgctgc ccgacctgca
    28321 ccgaacgctt cgccacctga ccgtccgccg gcgcgcggac ttgcgtccgc cgaaggttca
    28381 gccacgcatc tttcaacctg ccgattgccg tctgaacctc cggctgttcg cgcaaagaaa
    28441 catctccgcc caaagccgcg cgtgccgaag attcttccgc caaagccgcc ttaaccgccg
    28501 cctgcgcctg agacactgcc gtacgggcgt gtgccagctc ttcggcggac accgcacccg
    28561 attccgccaa agcggaccgg cggcgcaaat catcctgcgc gcgcgccaaa tccgcacggc
    28621 gcaaggcaac ctgcgccccc gcctgcgaag tggcggcatt ttgccggcgg ttttggcgca
    28681 ccgcctgaac caactcgttt tttgcccgct cgtaagccag cacatcatta tcgtcatcca
    28741 acaccgccag cacgtcgcct tttttcacgg catccgtatc gtcgtgcaaa accttccgca
    28801 ccgtgccgcc cttttgcggc gtaacctgaa ccacgcgtcc ggcaacataa gcgtcttccg
    28861 tttcctcttc gtgctgccac cataaaaaaa acgccgatcc ggcggctgcg gcggaaagcg
    28921 cgaacagcag cgtcaatgcc gtcaggcggc gtttgcgttt gacttgcgtg ttttgaagtt
    28981 ttgtttcgtc tgtgtgcgtt tccataagat tgggttccga atttcctgat ttcatataaa
    29041 caatattctt tcaataggaa atagatttta tatccgcgca ataacgcaat caagtcagta
    29101 ttttagatgc aatattcaaa aaacaacgct tcaggcggca aaactgaaaa tatatttcgt
    29161 ttatatatga catggcaaac accgccgccc gcaccatgcc gtctgaagaa aactacacag
    29221 ataccgccgc ttatattaca atcgccgccc catggttcga aaacctccca cactaaaaaa
    29281 ctaaggaaac cctatgtccc gcaacaacga agagctgcaa ggcatctctc ttttgggtaa
    29341 tcaaaaaacc caatatccga ccggctacgc gcctgaaatt ctcgaagcat tcgacaacaa
    29401 acatcccgac aacgactatt tcgtcaaatt cgtctgcccc gaattcacca gcctctgccc
    29461 gatgaccggg cagcccgact tcgccaccat cgtcatccgc tatatcccgc acatcaaaat
    29521 ggtggaaagc aaatccctga aactctacct cttcagcttc cgcaaccacg gcgattttca
    29581 tgaagactgc gtcaacatca tcatgaaaga cctcatcgcc ctgatggatc cgaaatacat
    29641 cgaagtgttc ggcgagttca caccgcgcgg cggcatcgcc gttcatccgt ttgccaacta
    29701 cggcaaagca ggcacagagt ttgaagcatt ggcacgcaaa cgcctgttcg agcacgacgc
    29761 acaataaacc atccttccca tatttcagac ggcattcctt cgatacggta tgccgtctga
    29821 acgcctttcc gaaaggtttt tatgtacgca ttgaccgccg cacagcaaca gaaggcactc
    29881 ttccggctgg tgcttttcca tatcctcatc atcgccgcca gcaactatct ggtgcagttc
    29941 cccttccgga ttttcggcat ccacaccact tggggcgcgt tttcctttcc cttcatcttc
    30001 ctcgccaccg acctgaccgt ccgcattttc ggttcgcact tggcgcggcg gattatcttt
    30061 tgggtgatgt tccccgccct tttgctttcc tacgtctttt ccgttttgtt ccacaacggc
    30121 agttggacgg gcttgggcgc gctgtcccaa ttcaacacct ttgtcggacg catcgcgctg
    30181 gcaagttttg ccgcctacgc gctcggacaa atccttgata ttttcgtatt cgacaaatta
    30241 cgccgtctga aagcgtggtg gattgccccg gccgcatcaa ccgtcatcgg caatgcactg
    30301 gacacgttag tattttttgc cgttgccttt tacgcaagca gcgatgaatt tatggcggca
    30361 aactggcagg gcatcgcttt tgtcgattac ctgttcaaac ttaccgtctg caccctcttc
    30421 ttcctgcccg cctacggcgt gatactgaat ctgctgacga aaaaactgac ggccctgcaa
    30481 accaaacagg cgcaagaccg ccccgtgccc tcgctgcaaa atccgtaaaa cagctctgta
    30541 gggaatcggg acggttgggt tttcttttat ttgcaaacac tgccggaacg gataaatccg
    30601 gattcccacc cacttcgtca ttcccgcgaa agcgggaatc cggtgcgttg gggttcagtc
    30661 atttccgata aactcctgcc gcattgtatt tctagattcc cgctttcgcg ggaatgacgg
    30721 cggatgggtt tccgtgccgt ggtgtccgga ttcccgccgg tacgggaatg acggcagcgc
    30781 ttccttggct tagttttatt ttaagccact ataaatgccg tctgaaaacc tgtttgcaga
    30841 ttttcagacg gcattgtttt cgtcgccggt tcaaacttca atccgattgc gacacggtaa
    30901 ccggtatgcc gcgcaagcgc gcaagcagcg cgtccgcctt ctgtttctgc gcggcaaacg
    30961 ccgccttgtc cgcctgcgtc aattcgggtg tcggcaatgc gaccgaaaca ggattgacgg
    31021 gctgcccgtt gatgcgcgcc tcgtaatgca ggtgcggccc ggtcgaacgc cctgtcgaac
    31081 cgacaaaacc gatgacctcg ccgccgcgca cattgccttg tgcctgcgaa aacgcgctca
    31141 agtgcgcgta cagcgtttcc acaccgttgg cgtggcgtat catcaccgcg ttgccgtatc
    31201 cgcccttccg gcctttaaag gtaatcacgc cgtcggcgga agccctgacc ggcgttccct
    31261 gcggtgcggc ataatcgatg cccgtgtgca gccgccatgt gtgcaggatg gggtgcatac
    31321 ggtagccgaa cggcgaagaa atgcgcgtat agaccagcgg ctcgatgttg aagccgcctt
    31381 tttcctgcaa caccctgccg tcttcatcgt aataattgcc gccccctccg ccttccttgt
    31441 ccgaacggta atagaacgcc tgatgggttg tgccgccctt gacaacttcc gccgccaaaa
    31501 tatcgcccgc cgccacctgc tgcccgtgga aatacaggct gtcgtaaagc aggcgcacgg
    31561 catcgccttc cttcaaaccg tcaaggctga agcggccggc aaaaatcccg cttaaggatt
    31621 cgcggatttc gacgggcact tccgcccgcg ccagcgaacc gcgcgccgac gttttgacca
    31681 cgaccgaacg cagcgtcggc aaaaccttca tatccgcatc agaagccgac cgccgccata
    31741 tgccgccttt tttttccaaa gcgaccagat tgcgctcgcc gtcttcgtcg gtaaaaaact
    31801 gcacttcgcg cgcactgccg tcgccgccga ccaaaacatg aaccgactgg tcggcacgca
    31861 aatgccgcaa atcggcttcg ccgccatatt tttccgtgat tcgggcaatc tcgtcccgcg
    31921 ccatacccga acgcgccagc acgtccgcca gcgagtcgcc cggctgcacc gcctcctgca
    31981 cccaatatgc cgtctgaacg ccgctgccgc cccaagacag cggcggcagt ttttgttcca
    32041 cgcgctgcgg tctgacgcgc tccgtcccct ctgtcgaagc aatgtatgcc gccgacacca
    32101 gaataatcga aacggcaagc gcgcgcagcg cgtatttccg atgttttgcc gaaagtggga
    32161 agacagccat attgttcctt tttgacggcg tttgcgccga atcctctata atatccgccc
    32221 gatcctcatt tgtcaggcat caaacgatga aactcaccct cgccctcccc tcgctcaatt
    32281 tggatgaaga cgaaatccga atacctctat gcctgcccgc cttcaacaaa atcctgcaat
    32341 acggctcgcc gcaccgccaa agctgcacgg cttcggcatt ttacgcacgt tatttgtggt
    32401 gcggaagact ggcacaacgc ccggcgcaaa gcctgaatat gccgtctgaa accgtcgcgc
    32461 tcgccacgcc cgtctggcaa aaaatggggc tgcatcaggc aaatgtgctg acggcggaat
    32521 atttggatgt cggtacggat gaagcggaac ggctctgccg cgatctgtcg gcgttttacg
    32581 gcgacattcc gtggcgtttc gttcccgtcc tgcccgaatt atggctggtt tcccttcccc
    32641 gcgcgtaccg ctggggcgcg aagcccgttt tggacttggg cggactgttg ggcgcggacg
    32701 atcagccgga cggggaagac gcgttggaat ggctgcgcgt ccaaaccgaa atccaaatgt
    32761 ggctgaacgc tcaccccgtc aaccacaacc gcaaaaaacg cgggctgccc gaattgaacg
    32821 gcttatggct ttgggacagt ctgcacggaa gcgcacaagg cggcacgctt ttcgccgata
    32881 cggtttggag ccgttttcac ccgaaccgcc gagcattgcc cgacagcttc cgagcttatg
    32941 cggaaacggc ggcacacctg cccgatacgc accacatcct gtttatggac gatttgcgcc
    33001 tgaccgccct gacaggggac agggagcggt atgcggcaat attgcagcag tggggagaac
    33061 gctggttcgc accgctttac gaagccgtcc gcaccggcaa aatcaaacgg ctggacatcg
    33121 ccacggacgg acaacacggc ggtacgctga ccttcaaacc cacagacagg cggaagtttt
    33181 ggcgctgcac gaaaaccttt gacggaatct ggtaaacccg cccgccgcaa ccgcgacaat
    33241 gccgtctgaa gcccgaatcg ggtttcagac ggcattttac cccgcatcgc cgttatgccg
    33301 gaaaaaccgg aatacgtttc cgcacacgcg gcggcacgca aaacaccgcc cgaaagccgc
    33361 cgatgcccgc cgtgacaccg ccgccggcag ggtttccgcc gaaaaggaac agcaatcaga
    33421 acgttttgtt aaactcgaca aacgccctgt ttttctcgta ttcgttaaac acatcgttgc
    33481 tccacgtttc gcggtgcgac agcgtcaggc gcggcgtgat gcctttgaaa tgcaatgccc
    33541 ggtgccaaag gctcaaggat gtgtccgatt ctttatccct gcgcctttcc cctttaaaac
    33601 tgctgaagaa gccgggtttt tcataatgcc gtttcgccac gccgaggcgg aacagcgaag
    33661 acaggccgct gccgccccat tcctgccccc aggcaaagcg caggccgtaa cggttgaaat
    33721 tgtcgccacg gtcggcgggg ttgcgctcgc ggtaaaaatc caaaccgccc gtccaatatt
    33781 ggcgcgcatt ccggtaaaac accagcgaat tggaaatttg caaatgggta ttgtcggaac
    33841 gcgcccggcg cgtattcttc aaacgccccc actccgccga agacagcgtt tgccatctcg
    33901 gggtttgcca acggttgaaa taaaggcgtg cgccgttggc gtaagaataa gcgtcgttgc
    33961 cgtaggtgcg gcgttcgtgg aacactgcca gcccgacatc tttacgccgg tcggcaaaac
    34021 cgatgccgcc ggaaacacct gccgtcatat cgttgaattt cttattcccc ggataagccc
    34081 tgccggacac gtcgccgccc gccgtcgtgt accagccgtt tttcagcgac cattttttct
    34141 ccgcgccgaa ccggtaattg accgccgtgc cgtccacctg tttcgggaaa gtccagttgc
    34201 cgtactgctg ctgtttcggg gcttggttga tattgtgttc gcgggtaatg ctgaaaccgc
    34261 cgtttacctt ccacgcatcg cgttcgcgca atgccttgcg gtacagctcg acctgctcca
    34321 taagctgcgg cggcagatct tctgttttca ggcggtcgaa ctggtctgcc gccgcctcgt
    34381 tctgcctgtc ttcaaacaat gccgccgcca aacgcatacg gacggcgggc gcgtcgggtt
    34441 gggcggcaat caattcccgg taatgggaaa ccgcctcctt caccctgccc tctgcctgcg
    34501 ccaaaatccc ttgtgcataa agtgccaaca tcttatcctg ccgcgcctgt tgtaggtaaa
    34561 tcggcaaaat cacgcggata ccggcaatat tgtttgagac cactgcggaa tacatggcac
    34621 gcgacaacaa ttcgggattt ttcagcaggg tttcgccgtc aacctgcaaa acttttcctt
    34681 tttcccgcac ctgccccggt accttctccc tgtcgatcgg tttgacctcc gcttcatgaa
    34741 gcctgaactc gggacggctt ctcaaatccg gttcgcgcgg tgtttcttcg gcgtatgccg
    34801 cgcttgccaa taaaggcagc agcatccatc tgtttcgtgc aggcataaat gtcttcccac
    34861 aaaaataaaa ataaaaaata accattatca accggcggat tgtatcagtt ttttatgccg
    34921 ctgttccaaa ccctgccgcc cgatgccgcg acaatgccgt ctgaagccag aatcgggttt
    34981 cagacggcgg caaaaaaccg gcggttttcc gccggtttca tcattatgcc ccgcccttcg
    35041 gggcggcagg gttcggatcg gtttgcgggg cggcgcacgg ggccgtgcag gtgtgccgcc
    35101 tgtgtgtcaa aacatttccc ggcgcatcaa aacaaccatt tgaccgacaa tgcggcttct
    35161 ttgtcgccgt ccgtcctttt gccgtatccg atgcgtgcgg acatatggcc tttccaaccg
    35221 gcttcaatgc caaaccgccc ttcgagcgcc gtcctgcctg ccagcgtctg tttttcgccg
    35281 tccatttcca tgccgaaaga ttttgacctg tgcaaaacat taaaagcggc aaaaggctga
    35341 agattgacac cgttacgcaa agcaaaacgg gtttttgccc gaatgccggc gcggatttgc
    35401 cactgaccgc tgccgagcag cccgaccgcc gcccctcgct gtcggtaaag ccgccgttta
    35461 cgcccaagta ggtaaactgc gcctgcggtt gcaggtaaaa ctgcatatta ctgccttata
    35521 tattgcgtcc ctaagaaggg gcgattaaca aaaattaacg ccccttctta gggacgcaat
    35581 atataaggag tgagtacctg ttcttctatt aaagaattaa tcttttgagg cattttctgt
    35641 tgaagtttat taaacacatc ttcagaaatt ccaaactgct ttattatctc ttccctaacc
    35701 cgttttttat tttcttccca agcctcgggt cttgttttgt ataaatcctg taattgcttt
    35761 ttaactgcct gctttaaatc agttcggtaa ttatctgtaa tatatttctt aacaacaggc
    35821 atattatcga cggcgaggat gccgctattg tagtttttac ccgtaatatt gatttcgtca
    35881 tacaaggctt cagatgattt ttgatcggtt ttaccgctgg agaaataatg gaaaacaccg
    35941 tttgccggct tgtctgaaaa tgaaaaatcg gcagtatcgc caacatttgt aggacgagta
    36001 tccgaaccgg gctgataact gaaagcaccg aagcaatcaa aagacacact gcacgggccg
    36061 cgccaaacgt gggaatttct gtcttccgcc gcttctaaaa taaatttgtt tttaatctcg
    36121 gcttctttga cgggatcgta cgcatccgaa ccccaagcat atggcgtgca aaacagcgat
    36181 aaaacagata atgttaatag attaacccga ccgcttgctt gcttgcttgc ttgcttgctt
    36241 gcttgcttgc tttcagtgtc atgagaa
//
LOCUS       DAWXHA010000007        30905 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.007, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000007 DAWXHA010000000
VERSION     DAWXHA010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30905
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.007"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            401..768
                     /locus_tag="AABD07_000276"
                     /pseudo
     CDS             401..768
                     /locus_tag="AABD07_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272218.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            765..1076
                     /locus_tag="AABD07_000277"
     CDS             765..1076
                     /locus_tag="AABD07_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HFB2354887.1"
                     /translation="MKYKSGIFAAIHETMQGLHDIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            1186..1386
                     /locus_tag="AABD07_000278"
     CDS             1186..1386
                     /locus_tag="AABD07_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354888.1"
                     /translation="MPDRIKPSRNGGGADGIARQQGTAQTGAKPETSPVARHGDFLRP
                     LQGGLDLSGTGLKAKRAGRRTV"
     gene            complement(1847..2402)
                     /locus_tag="AABD07_000279"
                     /pseudo
     CDS             complement(1847..2402)
                     /locus_tag="AABD07_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313076.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2399..3100)
                     /locus_tag="AABD07_000280"
                     /pseudo
     CDS             complement(2399..3100)
                     /locus_tag="AABD07_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950970.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
     gene            complement(3200..3340)
                     /locus_tag="AABD07_000281"
     CDS             complement(3200..3340)
                     /locus_tag="AABD07_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HFB2354889.1"
                     /translation="MISNHDTEFTRNIYSSAILKTVEVQRNIAAKGSSRKKVGELLAI
                     YD"
     gene            complement(3337..4128)
                     /locus_tag="AABD07_000282"
     CDS             complement(3337..4128)
                     /locus_tag="AABD07_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HFB2354890.1"
                     /translation="MNLFFDTQLGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQR
                     FANNKPVADLFCPNCHEQYELKSKNQKTIGNSVPDGAYRTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPHHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKDWLLAVMKCIDQLTEEFTLSQMYEFENKLSIQ
                     FPQNNHIKDKIRQQLQILRDQNMIEFIGRGLYKKIDKLHPTPKAF"
     gene            complement(4357..6987)
                     /locus_tag="AABD07_000283"
     CDS             complement(4357..6987)
                     /locus_tag="AABD07_000283"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HFB2354891.1"
                     /translation="MQEHYQPAAIEPAAQKKWDDARISNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     KCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETSCPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVSAESAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVSAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGSEQGRAVAQEVLEAAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALANEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            7254..7770
                     /locus_tag="AABD07_000284"
                     /pseudo
     CDS             7254..7770
                     /locus_tag="AABD07_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
     gene            7777..8220
                     /locus_tag="AABD07_000285"
     CDS             7777..8220
                     /locus_tag="AABD07_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HFB2354892.1"
                     /translation="MPPRLLSGILCCLLTTAPVFAQGQPDAVSAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGTATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            8389..10446
                     /gene="ppk1"
                     /locus_tag="AABD07_000286"
     CDS             8389..10446
                     /gene="ppk1"
                     /locus_tag="AABD07_000286"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HFB2354893.1"
                     /translation="MTEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRPDNGKTPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGTQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDVQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFRLTDAELYQVKGPVNLVRLNAVPDLVNRPDLKFPPHTPGRLKALGKNSPIFD
                     LVRQSPILLHHPYQSFDPVVDMIREAAADPAVLAVKMTIYRTGTRSELVPALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGLITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIGRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIVGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     ATPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWDL
                     LRG"
     gene            complement(10595..11698)
                     /locus_tag="AABD07_000287"
     CDS             complement(10595..11698)
                     /locus_tag="AABD07_000287"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HFB2354894.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGRGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDNRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLGQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(11778..13334)
                     /gene="dnaA"
                     /locus_tag="AABD07_000288"
     CDS             complement(11778..13334)
                     /gene="dnaA"
                     /locus_tag="AABD07_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HFB2354895.1"
                     /translation="MTLAEFWPLCLRRLHDMLPHGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRPAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEKPVKPAASKTAADILAERMKNLPHEPRQAAGPASRPESAA
                     VAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAENPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            13626..13760
                     /gene="rpmH"
                     /locus_tag="AABD07_000289"
     CDS             13626..13760
                     /gene="rpmH"
                     /locus_tag="AABD07_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HFB2354896.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            13763..14128
                     /locus_tag="AABD07_000290"
     CDS             13763..14128
                     /locus_tag="AABD07_000290"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HFB2354897.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCGKQV"
     gene            14193..14414
                     /gene="yidD"
                     /locus_tag="AABD07_000291"
     CDS             14193..14414
                     /gene="yidD"
                     /locus_tag="AABD07_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HFB2354898.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGLRLAIKRIARCHPFGGHGHDPVP"
     gene            14587..16224
                     /gene="yidC"
                     /locus_tag="AABD07_000292"
     CDS             14587..16224
                     /gene="yidC"
                     /locus_tag="AABD07_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HFB2354899.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFVLFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKD
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDI
                     KRRSDKLYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQT
                     IKEKYGDDRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(16305..17018)
                     /locus_tag="AABD07_000293"
     CDS             complement(16305..17018)
                     /locus_tag="AABD07_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFB2354900.1"
                     /translation="MMSPVLYLIPTPLGTPDTPCLLQHEQRAVVGLTDFVVEAEKTAR
                     AHLKHLGITTPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFNGYLPSEKNERIQSLNALEQ
                     RSRQCGETQIFIETPYRNDALLADAVENLHPETRLCTATDLTLPTQLVVSKTVADWRR
                     MKEMPNLKKRPTIFVMYAG"
     gene            complement(17077..17667)
                     /locus_tag="AABD07_000294"
     CDS             complement(17077..17667)
                     /locus_tag="AABD07_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HFB2354901.1"
                     /translation="MGLELPLVLGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLAGRFPGALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMHRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCAAKSEGL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVDVL"
     gene            17815..18315
                     /locus_tag="AABD07_000295"
     CDS             17815..18315
                     /locus_tag="AABD07_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HFB2354902.1"
                     /translation="MSDPNLIDPEIFAAERQNLQGSFLLEELDERVSLHDYPADRRTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSDEESLDES
                     MLADEELEGILIEKELDVRALVEDQILMSLPFSPRHGHCGNTLPESANQDKPNPFAVL
                     AGLKSS"
     gene            18349..18528
                     /gene="rpmF"
                     /locus_tag="AABD07_000296"
     CDS             18349..18528
                     /gene="rpmF"
                     /locus_tag="AABD07_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HFB2354903.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALFVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            18703..19230
                     /locus_tag="AABD07_000297"
     CDS             18703..19230
                     /locus_tag="AABD07_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HFB2354904.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNAGVKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDSEGQVTEEVKKVQWLDPVPEVLRGKNVLVVDEVDDS
                     RVTMEFCLKELLKEDFDTVGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            19320..20366
                     /gene="plsX"
                     /locus_tag="AABD07_000298"
     CDS             19320..20366
                     /gene="plsX"
                     /locus_tag="AABD07_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HFB2354905.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALNAAGAPMERIDICHTTQVVGMDESPQSALKNKKYSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDKTGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALEAAQNETAASL"
     gene            20504..20755
                     /locus_tag="AABD07_000299"
     CDS             20504..20755
                     /locus_tag="AABD07_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFB2354906.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFDILCTYIEDFDIRLTEQESREISFINKEFEIESTSD"
     gene            20773..21000
                     /locus_tag="AABD07_000300"
                     /pseudo
     CDS             20773..21000
                     /locus_tag="AABD07_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574240.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            21154..21420
                     /locus_tag="AABD07_000301"
     CDS             21154..21420
                     /locus_tag="AABD07_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354907.1"
                     /translation="MPIIQTILEGGDIKVKNLKTENYSGKAREILGDCYPIEHISKNI
                     STIQNIISEFIRQKQTPAPNNLMETQQSRCRLKQLGLSDGISFA"
     gene            21372..21575
                     /locus_tag="AABD07_000302"
     CDS             21372..21575
                     /locus_tag="AABD07_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354908.1"
                     /translation="MPSEAAWAFRRHFLRLKQRIGNPAPPVHGNPHLKTICMPNHTPI
                     PVSVICTLPVLGNHRFFAYNSRI"
     gene            21602..22564
                     /locus_tag="AABD07_000303"
     CDS             21602..22564
                     /locus_tag="AABD07_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HFB2354909.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSASDKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAEQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDAGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            22611..22982
                     /locus_tag="AABD07_000304"
     CDS             22611..22982
                     /locus_tag="AABD07_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HFB2354910.1"
                     /translation="MKRQAFFKPMACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWTGAYLGSRMFRHKTAKKRFVVLFRLTVSGNVLA
                     TCILIDYFVPPELFVKLGQHL"
     gene            23008..23934
                     /gene="fabD"
                     /locus_tag="AABD07_000305"
     CDS             23008..23934
                     /gene="fabD"
                     /locus_tag="AABD07_000305"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HFB2354911.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEHAIVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEVGGKTPAAVAGHSLGEYTALVAAEA
                     LDFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVRQICAESAQGEVVEAVNFN
                     SPGQVVIAGNAAAVGRTMAAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDAGKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQITAFIEAH"
     gene            24073..25938
                     /gene="msbA"
                     /locus_tag="AABD07_000306"
     CDS             24073..25938
                     /gene="msbA"
                     /locus_tag="AABD07_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HFB2354912.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAGILSTLQNWREQFTYMVWGTENKIWTVPL
                     FLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLMN
                     MLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRYY
                     RDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSKK
                     ITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKSL
                     ANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKAL
                     DNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLRA
                     QFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGS
                     NGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGII
                     VAHRLTTVESADRIIVMDGGKIIEQGTHDQLMFQNGYYTMLRNISGKDTAAVQTA"
     gene            26038..27603
                     /gene="guaA"
                     /locus_tag="AABD07_000307"
     CDS             26038..27603
                     /gene="guaA"
                     /locus_tag="AABD07_000307"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HFB2354913.1"
                     /translation="MTQDKILILDFGSQVTRLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSGLTRGIQDDAPNTLDVWMSHGDKVSKLPDGFAVIGDTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYYYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            27665..28411
                     /gene="fabG"
                     /locus_tag="AABD07_000308"
     CDS             27665..28411
                     /gene="fabG"
                     /locus_tag="AABD07_000308"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HFB2354914.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKIIGTATGESG
                     AAAISKRLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDNIMQVNLKSVFRASKAVLRGMMKQRSGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFAKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
     gene            28476..28961
                     /locus_tag="AABD07_000309"
     CDS             28476..28961
                     /locus_tag="AABD07_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HFB2354915.1"
                     /translation="MNTHHHLPCPCGSGTSYAGCCRPLHLRQILPPTAEALMRSRYGA
                     YVLHLIDYIIATTVPAQQTFLDAAELMQWSREAEWLGLNVIAHRNLGKQHAQVEFEAY
                     FQDGGNRTVHHELSAFVKIAEQWYFIDPTVPLPTMKQPCICGSGKKFKACCGKYLQPV
                     A"
     gene            complement(29179..29973)
                     /locus_tag="AABD07_000310"
     CDS             complement(29179..29973)
                     /locus_tag="AABD07_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFB2354916.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSRRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
     gene            30077..30802
                     /locus_tag="AABD07_000311"
     CDS             30077..30802
                     /locus_tag="AABD07_000311"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HFB2354917.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHTARLTVLEKHRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTRLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAAIAAMQTLWGDFT"
BASE COUNT         7626 a         9037 c         7536 g         6706 t
ORIGIN      
        1 aaatttaatt cactataaaa ataagaaaaa gataaaaaat tggtaacaaa tgcggtaaca
       61 aatggtaacg aatcggtaac aacttttggg gttttccggt tttttaccgt cttggcagtg
      121 ggagcgtagc ggaatgaaaa gccaaaacgc acggaaccgc gcctattttg agcaggaatg
      181 gcggttaaac cggttggtta tattgcgggg cataggaaga cagcgaaacg cgctaaaaac
      241 gcaatttgag ccattaaaag cgattgatta aaaaataatc aaattagccg ccggtgtttc
      301 aggcggcata aacggagaaa ttgcagggta taaaaaggcg gcttgccgtg ttgcctgtct
      361 ttggtataat ccccagtatc actaagtaaa cggttgcaca atgcggatat tcaaaaacca
      421 atggatagtg aaatttgcca agaagcacaa aatcagtgat tcagagctga tagaggcggt
      481 agagcgggca gataacgggc tgatagatgc agatttgggc ggcgcgtgat taagcagcgt
      541 atagcaaggc aagggcaagg cagaagcggc ggttatcgca gtctgatatt tttcaggcat
      601 ggagaacggg cgtttttcat gaccgccttt gccaagaacg accgcgaaaa catcactgat
      661 aaagaactta cagaattaaa gaaaaccgcc gccatcatct tggcaatgac agaaaccgac
      721 atagagcaag cgaagtcaaa cggcactttc acggagatac agccatgaaa tataaaagcg
      781 ggattttcgc agcaatacac gaaaccatgc agggattgca cgacatcggc gcaatcgaca
      841 aaaagactat gcgcggcttt gacaagtcct gcctgaccga aatcaagccg ttgagcggcg
      901 gggacatcaa ggcaatcagg gagaaggagg cactatcgca agccgctttc gccatctatc
      961 tcaacgtggg gaaaaatcac gtttcggctt gggagcgggg cgttaaaaag ccgagcggcg
     1021 cggcgttgaa gctgctgacc atcgtcaaaa acaagggcat cgaagccatt gcgtagccga
     1081 cttggcaaac ggcaaaatca gcaagttcac aatagacgcg ctgctgaata tgcctgccaa
     1141 aacaggcaag accgccgaac tgaatatcag ggcgtagccg cataaatgcc cgaccgcatc
     1201 aaaccaagcc gaaacggcgg cggtgcagac ggcatagccc gacagcaagg cacggcgcag
     1261 acgggcgcga aacccgaaac atccccggtc gcaaggcacg gggatttttt gcgcccgttg
     1321 caggggggat tggatttaag cggcacgggc ttgaaggcaa aacgggcggg gcgcagaact
     1381 gtttaaatgc cgtctgaatc tcaaaccatt tcagacggca ttttgaaaca acggctcaaa
     1441 ttctcgatcc ccttccctta acgccgacgt tttttattaa cgcgcccctt atttctgaca
     1501 ctttgctcat aaaccggcat aacggtcggc aacaaccgtt ttagattttc tatacgggca
     1561 ttgtttacag catcagcata agacaccgta ctctggaata ccgcctaaac cctgcggata
     1621 gttttggatg tggtatcgac attgtcggca gacttgtcta actcgaccgt tttcaaataa
     1681 tctttgacag atgctgcatt cagtgtcgcg gaatccgcgt attttgaaca aaaggtcggg
     1741 ctactttatc acaatagcag aaagatggaa aacggcgggg attggtgaaa ggtcgtctga
     1801 aatgatattc agacgacctt gaacggttgt gttttaaata tggtatttat tcatttgttt
     1861 caccatcagg cagtccaaac caccttaagg gaatcgtgtt aaattggtaa tggcagttaa
     1921 cactgataat ataatctaaa acatctttaa tattccggtt ttgtaaacca atcattcaaa
     1981 acatagacat atccaacccg ccaacctaaa gagtgaacta actttgtata ttgttttctc
     2041 ttaaaatcgc aagtttgtaa tttctcatct actgaaccgg gagtttgttg gaatttgatc
     2101 tcaataataa ataaggtatc acggatgatg ataaataagc cattatcggg cagtaatctt
     2161 ttagacagat ggtctttcca attaatattg tattccagtc tttccaaaaa tcggtaaaac
     2221 tcatattttt tgaaacaata agccttcaat tctccattaa accaaacttc ataacccgca
     2281 ttatcatctg tttttcttaa gtcgtacccg ggaatttctt caaacaactt tcgtaagtct
     2341 gtacgttctt cgaatctgag tcctgtttgt gtccttgcac cgccgattcc gccaataatc
     2401 atttttctaa ccttttcttt gctaattcaa aaaaatcttc ttccagttcg caaccgcaaa
     2461 atctccgacc atgttttaag gcggcaacgc ctgttgtgcc gctgcccata aaagggtcaa
     2521 aaattaaatc tccgatattt gaagccgata gtatgcagcg ttcaagtaag gggagtggtt
     2581 tttgtgtcgg atgtttgccg aatgtttttt cggttttatt tggtggagga aatgtccaaa
     2641 cacatttcat ctgtttgcca tcattttgtg ttttcatggt ttcataatga aacgtgtgtt
     2701 tagctttttt atttttcttt gcctataaga ttgtttctgt cgaatgggta aagaaacggc
     2761 aggacaaatt agggggagga ttgggttttt cccaagtaat attgttcaaa atatggtagc
     2821 cgacggtttg catcaggtag ccgattaaat agatattatg aaatgtgccg caaacccaaa
     2881 ttgtgccgtt tggttttaat aaggcgtaac acagtcggag ccattcttcg taaaattcca
     2941 aatctgccgc cattcctttg gatttatccc agttgccctt attgacggaa accatttgcc
     3001 cgttttgaca actgaaaccg tcattggaaa gaaagtaagg cgggtctgcg aaaatcatat
     3061 caaaacagcc gtttggatgt ttttccaata tcttccgcat gacgttaagg gaattttcgt
     3121 tgtagaggac aaggtcgtct gaaacgattt tttcaaacga ctttgataaa tggcagcttc
     3181 ttcagccggt ttgtcaaaat caatcataaa ttgccaataa ttctccgact tttttacgac
     3241 tgctgccctt tgcggcaata ttgcgttgta cttcaaccgt ttttaaaatg gcagaagaat
     3301 aaatatttct cgtaaattca gtatcatgat ttgaaatcaa aacgccttgg gagttgggtg
     3361 caatttgtcg atttttttgt aaagtccgcg accaatgaat tcgatcatat tttgatcacg
     3421 caaaatttgc aactgttggc ggattttgtc tttgatatgg ttgttttggg gaaattggat
     3481 ggatagtttg ttttcaaatt catacatttg cgacaatgtg aattcttcgg tgagttggtc
     3541 gatacatttc ataacagcca aaagccagtc tttgcgctcc gcattttggt tgcgtaaaaa
     3601 caggttggat tgccattttt tcagaacggt ttcgggttcg ataatgcggg aatcgtctat
     3661 taagaatatt tttccgcttt caggcaaagg ggcgagattg atggaacaca taatgtggtg
     3721 cggtcggttt ttaatgcctt tatttctggg aataatcata tccggcgtga tgaaatgttt
     3781 gggtacaagc accaattgcc gtatggagta atccgctttt ttatatgcaa gaaagaaaaa
     3841 gttggggttg gtatctgacc ggatgcgctc caacatagtg cgatatgcac cgtcaggcac
     3901 gctgttgcct atggtttttt gatttttact ctttaattca tattgctcgt ggcaatttgg
     3961 gcaaaagagg tctgcaacag gtttgttatt ggcaaatctc tgcatcggct tgcttccgca
     4021 acaggggcaa tagccgtttt tttccagcca agcctcgctc attacacgga ttttgtgggt
     4081 tgctttattt tgttgctttc ccaattgggt atcgaaaaat aaattcatat tttggatttt
     4141 gagattaatt tttagtagat taacaaaaat caggacaagg agacgaagcc gcagacagca
     4201 gggcaaggcg gggcaacgcc gtaccggttt aaagttaatc cgctatattt gaggtctgtc
     4261 ttgcagacaa cccaatctgc cttaaaaagg ccgtctgaaa ccctgtttcc aagtttcaga
     4321 cggcctttat ccgtatggct aaaccttaaa agcggtttag acgacgatgt tcaccagtct
     4381 gcccggtacg acgatgattt tcttcgcagg cttgccttcc atgaatttca ctgcgccttc
     4441 gttggcgagt gcggcggctt cgaggtcggc tttggaggcg tcggcggcga cggtgatttt
     4501 gccgcgcagt ttgccgttga cttgaaccat cacttcgatt tcggatttga ccagggcggc
     4561 ttcgtcgact gtcggccagc ctgcttccca cagtttcgcg ccgttcaatt cgctccacag
     4621 ggtttcgcag atgtgcggca cgatgggcca caacaggcgt acggcggctt ccaatacttc
     4681 ttgggcgacg gcgcggcctt gttcgctgcc ggtgtcggtt ttgtcgtatt ggttgagcag
     4741 ttccatcacg gcggcgatgg cggtgttgaa ctgctggcgg cggccgtagt cgtcgctgac
     4801 tttggcggtg gtggaatgca gtttgtggcg caggtctttg agttctttag acaaaccgtc
     4861 ttggttgcct gcaaatgctt tgaccgcgcc gccttgcttc aggtattcgt aaacggtacg
     4921 ccacagacgg cgcaggaagc ggtgtgcacc ttcgacgccg ctgtcgctcc attcgaggga
     4981 ctgttcgggc ggtgcggcga acatcatgaa caggcgggcg gtgtccgcgc cgtaggcgtt
     5041 aatcagttct tgcggatcga cgccgttgtt tttggatttg gacatttttt ccgtgccgct
     5101 gatgacgacg ggcagtccgt cggctttgag gacggcggaa acggggcggc ctttgtcatc
     5161 gaaagtcagc tcgacatcgg cggggttgat ccagtctttg ccgcctttgt cgttttcgcg
     5221 gtagtaggtt tcgcagacga ccataccttg cgtgagcagg cgttcaaacg gttcgtcaac
     5281 attgaccaaa ccttcgtcgc gcatcagttt ggtgaagaag cgcgcgtaca ggaggtgcaa
     5341 aatcgcgtgt tcgatgccgc cgatgtattg gtcgaccgcg ccccagtatt tcgcggattc
     5401 tgccgatacc atgccgtctg aaaacttggg cgacatatag cggaagaagt accagctcga
     5461 ctccatgaag gtgtccatgg tgtcggtttc gcgtttcgcc gcgccgccgc agcacgggca
     5521 ggaagtttcg taaaactcgg gcatttttgc cagcggcgaa cccataccgt cgggtacgac
     5581 gttttcaggc aggacgacgg gcagttggtc ggcagggacg ggaacgtctc cgcatttttc
     5641 gcaatggacg atgggaatcg ggcagcccca gtagcgttgg cgcgaaatgc cccagtcgcg
     5701 caggcggtat tgggttttcg gttcgcccgc accttggctt tgcagcttgg cggcaacggc
     5761 atcaaatgcc gtctgaaaat ccaagccgtc caagtcgccg ctgttgacca atacgccgtt
     5821 ttctttgtcg ccgtaccatt cttgccatcg gtttgcgtcg aatgcgttgt cgccgacggc
     5881 aatgacttgt tttttcggca gattgtattt ggcggcaaac tcgaaatcgc gttcgtcgtg
     5941 cgccggaaca gccatcaccg cgccgtcgcc gtagccccac aagacatagt tggcaatcca
     6001 cacttccagc ttgtcgccgt tgagcgggtt gacgacgtag cggccggtcg gcacgccttt
     6061 tttctccatc gtcgccatat cggcttcggc aaccgaaccg gctttgcatt cggcgataaa
     6121 tgcctgcaat tcgggtttgt cggcggctgc ggctgttgcc agcggatgtt cggcggcaac
     6181 agcgacataa gtcgcaccca tcagcgtgtc ggggcgggtg gtataaactt gcaggaattt
     6241 cgcgtaatcg ccttccaaac cttgcttgct gtcgtctgaa acggcgaagc gcacggtcat
     6301 gccgcgagat ttgccgatcc agttgcgctg catggttttg acttgttccg gccagtgttc
     6361 cagcttgtcc aaatcgttga gcagctcttc ggcgtaatcc gtaattttga agtaatacat
     6421 cgggatttcg cgtttttcga tcaacgcgcc cgaacgccag ccgcgtccgt cgatgacttg
     6481 ctcgttggca aggacggttt ggtcgaccgg gtcccagttc accgttccgt ttttgcgata
     6541 gacgatgcct ttttcaaaca gcttggtaaa cagccattgt tcccagcggt agtattcggg
     6601 tttgcaggtg gcgacttcgc gttcccagtc aaccgcaaaa cccaggcttt tgagctgggt
     6661 tttcatgtat tcgatgttgt cgtaggtcca agcggcgggg gcgacgttgt ttttcatcgc
     6721 cgcattttcc gccggcatgc cgaacgcgtc ccaacccata ggctgcataa cgttgaagcc
     6781 gtttaaaagt ttgaagcggc tcaatacgtc gccgatggtg tagttgcgta catgccccat
     6841 atgcagcttg ccgctagggt aagggaacat cgaaaggcaa taatatttgg gtttggaagc
     6901 gtcttcggag acgttggaaa tacgggcgtc gtcccatttt ttctgcgccg caggctcgat
     6961 ggcggcgggc tggtaatgtt cttgcatggt cattctgttt ttcgcttgaa aacgttagga
     7021 atttaaagga ggaattataa caggttgccg atgtcggcga atcggcaaat tgccggcagg
     7081 atgcgtaaat tcgcacgcgc atcattccgt atgccgtaca aatacaccgc gtttactgat
     7141 acgcacgttt tttatgctaa tattacgaac caaaatcaaa cgtttaaaac tctcctgatg
     7201 cggctcttcc gaacaaaagg cagacgggca tcgggtaaaa aaggattctg catatgaaaa
     7261 tcaaacaaat cgtcaaaccg agcttggcag tattggcggc aggcattctg tctgcctgcg
     7321 caaccataaa gcaacgtcaa agccgacggc acgaccgaca atccggtttt cccggaaccc
     7381 tattccgtaa cgctcgacaa caagcgcggc acattcccga cttatgacga actggatcag
     7441 atgcgccccg gtctgaccaa agacgacatc tacaaaatcc cgggccgccc gcattacgac
     7501 gaaggtatgt acggcgtgcg cgaatgggat tacctgttcc acttccacac cccgggcgtg
     7561 ggtatcgacc ctgaaaacac ttccggcgtg gaaggcgtta ctacctgcca atacaaagtg
     7621 attttcgata aagacaaatt tgcccgcagc ttctactgga accccgtctt cccgaaagat
     7681 gccgtctgcc cgccgcccgc acccaaagcc gagccgcaag tcatcatccg cgaaatcgtg
     7741 ccggcaaaac cgaaacgtat ccgccaataa gccgctatgc cgccccgcct gctttcaggg
     7801 atattgtgct gcctgctgac gactgccccc gtattcgcac aggggcagcc ggatgcggtc
     7861 agtgcctata ttcaaaagaa aaaagtcatc gtcgacacat ccaaggcgga actctgtttt
     7921 gccgacgacc gtcagtgcca ccccgtcctc atcggcactg ccacacccaa ggggacgttc
     7981 ggactgacgc tgaacagtac cgacaagccc ggttacggcg gcgaagtcat cggtttcaag
     8041 caggagggcg attttctttt cgccctgcac cgcgtttgga atcagatacc gtccgaaagg
     8101 cgaaacgaac gcatcgcctc cccgtccgtg tccgacagga ttatgaccaa cggctgcatc
     8161 aacgtcagcg atgcggtgta cgaaaaactg cgtcattatt ttgtgttgga agtgatttga
     8221 aacagacgga taccgcacgt gccggtatcc gttttcacat tgccccgatg cctgaaacag
     8281 accgtccgtc acgtcatgcc gcctgaaacc ggcgcagatg ccgccaagcc ttcagacggc
     8341 attgtccgcc cgctccgacc gaacaacaac catctttggg agaaccttat gaccgaacaa
     8401 aaccgcatcc tctgccgcga actgagcctg ctggcattca accgccgcgt gttggcacag
     8461 gcggaagaca aaaacgtccc ccttttggaa cgcctgcgct tcctgtgcat cgtgtcgtcc
     8521 aatcttgacg agttttttga agtccgcatg gcgtggctca agcgtgaaaa caagctgcac
     8581 ccccggcgca ggccggacaa cggcaaaacg ccgtctgaaa ccatcgccga cgttaccgaa
     8641 gcggcgcgct ccctgatacg gcaccagtac gacctgttca acaacgtcct tcagcccgag
     8701 ttggcgcggg aaagcatcca tttttaccgc cgccgcaatt ggacgggcac gcagaaaaaa
     8761 tggatcgaag actatttcga ccgcgaactg ctgccgatcc tgacccccat cggactcgac
     8821 ccttcccacc ctttcccgcg cccgctgaac aaatcgctca acttcgccgt agaactcgac
     8881 ggcacggacg cgttcggcag gccttcgggt atggcgattg tccaagcacc gcgcatcctg
     8941 ccgcgcgttg ttcccctgcc gtccgaactg tgtggcggcg gacacggctt cgtcttcctg
     9001 tcgtccatcc tccacgccca cgtcggcaaa ctcttcccgg gcatgaacgt caaaggctgc
     9061 caccagttcc gcctcacgcg cgacagcgac ttgaccgttg acgaagaaga cgtacaaaac
     9121 ctccgcgccg ccattcaaaa cgaactgcac gaccgcgaat acggcgacgg cgtgcggctc
     9181 gaagtcgccg acacctgtcc cgcctacatc cgcgactttc tgctcgcgca attcaggctg
     9241 accgacgccg aactctatca ggtcaaaggc ccggtcaacc tcgtccgcct caacgccgtc
     9301 cccgacctag tcaaccgccc cgatttgaaa tttccgccgc acacgccggg ccgtctgaaa
     9361 gccttgggca aaaacagccc gatcttcgat ttggtgcgcc aatcgcccat cctgctgcac
     9421 cacccctacc aatctttcga tcccgtggtc gatatgatac gcgaagccgc cgccgatccc
     9481 gccgttcttg ccgtcaaaat gacgatttac cgcaccggca cgcgctccga actcgtcccc
     9541 gccctgatga aggcggcact cgccggcaaa caagtaaccg tcgtcgtcga actgatggcg
     9601 cgttttgacg aagccaacaa cgtcaactgg gcgaagcagc tcgaagaggc gggcgcgcac
     9661 gtcgtgtacg gcgtgttcgg ctacaaagtc cacgccaaaa tggcactggt catccgccgc
     9721 gaagacggcg tgctcaagcg ttacgcccac ctcggcacgg gcaactacca ccaaggcaca
     9781 tcgcgcatct acaccgactt cggcctcatt accgccgacg aacaaatcac cgccgacgtg
     9841 aacacattat ttatggaaat cacaggcttg ggcaaacccg ggcggctgaa caaactctac
     9901 caaagtccgt ttaccctgca caaaatggtt atcggccgca tcgctcgcga aaccgaacac
     9961 gcaaaagccg gcaaaccggc gcggattacc gccaagatga attcgctcat cgaaccgact
    10021 gtcatagaag ccctgtatcg ggcaagcgcg gcaggcgtgc aaatcgattt gattgtgcgc
    10081 ggtatgtgta ccttgcgccc gggtgtaaaa ggcttgtccg aaaacatccg cgtccgctcc
    10141 atcgtcggca ggcagctcga acacgcgcgc gtatattgtt tccacaacaa cggcgcggac
    10201 gacaccttta tttccagcgc ggattggatg gggcgcaatt tcttccgccg catcgaaacc
    10261 gccaccccga ttaccgcgcc cgaactcaaa aaacgcgtca tccgcgaagg tttggaaatg
    10321 gcactggcag acaataccca cgcgtggctg atgcagcccg acggcggcta tatccgcgcc
    10381 gcgcccgccg aaggcgaaag cgaagccgac ctgcaaaacg atttatggga tttgctccga
    10441 ggctgacccg cacaagcact tcccccatac gctcccaacc ccaatccgcc gcattccaga
    10501 cggcattgcc tttccgacag ccgaacaaaa ccccgaatcc gtctgcacgg ttcggggcat
    10561 atctccaata cgggcatcgt gttccggaaa accgtcaaat ccgcatcggc atcacaatat
    10621 atttgaaatt cggattgttc ggcacggtaa acagcgtcga gcggttggcg tcgccgaagg
    10681 caagctgcat atcgtcggaa tggatgttgc gcaacacgtc catcaaatag ccgatattga
    10741 aaccgacttc gagttcgccg ccctgatagg cgatttcgat ttcttcgcgc gcttcttcct
    10801 gctcgttgtt gctgcacacg acgctcaaca ggccgggttg caggaacagg cgcgcgccac
    10861 ggaatttttc gttggcaaga atggacacac gttccagcgc gcccaaaagt tcggcacggg
    10921 acaacacgaa aatcttgtcg ttgtccaaag gaatcacgcg gttgaaatcg gggaatttgc
    10981 cgtcgatgac cttgctgacg atggtcgtgc cgttgcattg gaaacgcacc tgcttgtcca
    11041 gcagctcgat ttgaatcgga tcgtcggggt tgttcaacag tttgaacagt tccagcaccg
    11101 ttttgcgcgg caaaatcact tcggcgcgcg gcaaatccgc atcaatcgcg caggctgcat
    11161 aggcaaggcg gtgtccgtcg gtcgccacaa ggcgcaactg gctgccctca acctgcatca
    11221 gcagaccgtt gagataatag cggatgtcct gcaccgccat gctgtactgc acttgcgaca
    11281 gcatggtttt gaaacgctcc tgccccagcg agaaagtcgc gctgatgtcc tcgccgacat
    11341 tcatcatcgg aaaatcggcg gcaggcaggg tttgcagggc aaaacgcgat ttgcccgcct
    11401 tcagcgtcag acggttgtcg tcccaatcca gcgacaccag cgcaccggca ggcagcgcgc
    11461 gcaaaatgtc ctgaaatttc ttggcattgg tagtgatgcg gaagtcgccc gcacctccct
    11521 cgggacccgc ggtgtcgatt tggatttcca aatcggttgc caagagtttg gtctgaccgc
    11581 ccctgccctc aatcagcaca ttggacagga tgggcagggt gtgtcggcgt tcgacgatgc
    11641 cggtaacggc ttgcagcggc ttgagcaggc tgtcgcgctc ggcttgtaaa atcaacattt
    11701 tcgctcctta aatcggttgg atttcctacc cttcggacgg catggtcaat gtcatgccgt
    11761 ctgaaaggcg tgtccggtca gttttgaatc agaatcagca gtttctcgta atcctgcgcc
    11821 aactcggggt cttcctcgcg cagtttcgcc accgccctga tgccgtgcat gacggtcgta
    11881 tggtcgcgtc cgccgaacga atcgccgata gacggcaggc tcaaagtggt caattctttg
    11941 gtcaggctca tggcaacctg acgcggacgg gcaatgttgc gcgtgcgttt tttgccgagt
    12001 acgtcgctga ttttgatgcg gtaatatttc gccaccgcat cgatgatgat gtcggcggtg
    12061 atgactttgt gcttctcggc aataatgtcc tgcaaagcgg tacgcgccaa atcgatgtcg
    12121 atgacgggac ggttcataaa gcggctgctc gctccgacac ggttgaacgc gccttccagt
    12181 tcgcgcacgt tggaacggat cagattggca atgaacagcg cggcttcgtc ttcgatactg
    12241 atgcccgccg cttccgcctt tttctgcaaa atggcgatac gcatttccaa ttcgggcggc
    12301 tcgagttcca aagtcagccc ccacgaaaag cgggatttga ggcggtcgtc cataccttcg
    12361 attttggcgg gtaaaacatc gcaagtgagg atgagctgtt ttttctcatt gtgaaaatgg
    12421 ttgtacagat agaaaaattc ttccatcgta cggtcttttc ctttgatgaa ctgaatatcg
    12481 tcgataatca gcaggtcgta ttgcttgtat tgctgcttga acacgtcgta ggtattgttg
    12541 cgaaccgcct tcataaagct gcggatgtag tcgtccgaat gcatatagcg cactttggca
    12601 tcgggacggt ttttcaacag ctcgttgccg accgcctgca caaggtgggt tttgcccaaa
    12661 cccgtgctgc cgtacaggaa gaacgggttg taactctgcc ccgggttttc cgcaatcgcc
    12721 tgcgccgcag ccgccgcaag gcggttgccc ttaccttcta ccaacgtatc aaacgtgtaa
    12781 tccggagaca ggttggtttg ttcgtaacgc gcttcttccg catcacgctg cgcatccgtc
    12841 cgcgctttgg caactgccgc cgattccggc cgggaagcag gcccggcagc ctgacgcggc
    12901 tcgtgcggca ggtttttcat acgttccgcc aaaatatccg ccgccgtttt cgacgcagcg
    12961 ggtttgacag gcttttcaga cggcagctcg tccaacagaa cctcctgcac gggcatctcc
    13021 tccgaccccg cgtgcaagga cggctcggca ggttcgacag caccttcaac cgccgccatc
    13081 tcataacgca cgccttctcc cggtttgaat acgaaggcgg gacggccggc agccaactct
    13141 tccctcaccg cttctatttt tccggcaaac tggctcttga gcatattgca ggcaaactgg
    13201 ttcttgccgt acaccaccca tacgccaccc tcctcaccaa ccgtaagggg cgcaatccat
    13261 tgcgcaaact gcccgtgagg caacatatcg tgaagacggc ggaggcacag cggccaaaac
    13321 tctgctaatg tcatggatag gctcgaatcg gtaaaaatga aatcgaaaac aaagaaaata
    13381 taatattttc aaaaagaaaa caaatctgtt gaatacgcgt cggttcaaaa cgcagcgaac
    13441 cgattatacc gactcgccga tattttatcc acaacccgtg caaaaattta tccacagaaa
    13501 ggcggcagaa atccgcaggc aatcgggcaa tcctcctgca aagtttctat attgattgac
    13561 aaaagcggca aattggagtg taattcacgg tttaattatc tacccattct attttaggaa
    13621 ccatcatgaa acgcacttat caaccttccg ttaccaaacg caaacgcacc cacggcttcc
    13681 tcgtgcgctc caaaacacgc ggcggacgcg cagtattggc cgcacgccgt gccaaaggcc
    13741 gcaaacgcct ggcagtgtaa ttttggacta ccgcttcgga aggcagtacc gcttgttaaa
    13801 aacggatgat ttttcatccg tttttgcatt cagaaaccgc cgcagccgcg acctgctgca
    13861 agtttcgcgc tcaaacggca acgggctgga ccatccccgc atcggtctgg tggtcggcaa
    13921 aaaaaccgcc aaacgcgcca acgagcggaa ctatatgaaa cgcgtcatcc gcgactggtt
    13981 cagattgaac aaaaaccggc tgccgcctca ggatttcgtc gtgcgcgtcc gccggaaatt
    14041 cgacagggct accgcaaaac aggcaagggc ggaactggca caactcatgt tcggcaaccc
    14101 cgcaaccgga tgcgggaaac aggtatgatc agaacggtac cctgcaggca aggttcagac
    14161 ggcaacgggt ttcccataca aggaacatcc cgatgaactt cctattgtcc aaactgctgc
    14221 tggggctgat aaggttttac caatactgca tcagcccgct gattccgccg cgctgccgtt
    14281 atacgccgac ctgttcgcaa tacgcggtcg aagcggtcaa aaaatacggc gcattcaaag
    14341 gcctccggct cgccatcaag cgcattgcac gctgccaccc tttcggcgga cacggacacg
    14401 accccgttcc ctgacccgac gcaatattca aattgcacgc tttcctttta tttcccatcg
    14461 gtttctatat aatgccgtct gaaccttcgg gctggcggca cggccgtcgg gtatgaagcc
    14521 cgcccttatt ccccgtctat cggaacacgc aacctgcggc atttccgacc attcaggaaa
    14581 ctctatatgg attttaaaag actcacggcg tttttcgcca tcgcgctggt gattatgatc
    14641 ggctgggaaa aaatgttccc caccccgaaa cccgtccccg cgccccaaca ggcggcacaa
    14701 aaacaggcag caaccgcttc cgccgaagcc gcgctcgcgc ccgcaacgcc gattaccgta
    14761 acgaccgaca cggttcaagc cgttattgat gaaaaaagtg gcgacctgcg ccggctgacc
    14821 ctgctcaaat acaaagcaac cggcgacgaa aacaaaccgt tcgtcctgtt tggcgacggc
    14881 aaagaataca cctacgtcgc ccaatccgaa cttttggacg cgcagggcaa caacattctg
    14941 aaaggcatcg gctttagcgc accgaaaaaa cagtacaccc tcaacggcga cacagtcgaa
    15001 gtccgcctga gcgcgcccga aaccaacgga ctgaaaatcg acaaagtcta tacctttacc
    15061 aaagacagct atctggtcaa cgtccgcttc gacatcgcca acggcagcgg tcaaaccgcc
    15121 aacctgagcg cggactaccg catcgtccgc gaccacagcg aacccgaggg tcaaggctac
    15181 tttacccact cttacgtcgg ccctgttgtt tatacccctg aaggcaactt ccaaaaagtc
    15241 agcttctccg acttggacga cgatgcgaaa tccggcaaat ccgaggccga atacatccgc
    15301 aaaaccccga ccggttggct cggcatgatt gaacaccact tcatgtccac ctggatcctc
    15361 caacctaaag gcggccaaag cgtttgcgcc gcaggcgact gccgtatcga catcaaacgc
    15421 cgcagcgaca agctgtacag cgcaagcgtc agcgtgcctt tagccgctat ccaagccggc
    15481 gccaaagccg aaactgccgt caacctgtat gccggtccgc aaaccacatc cgttatcgca
    15541 aacatcgccg acaacctgca actggcaaaa gactacggta aagtacactg gttcgcatcg
    15601 ccgctcttct ggctcctgaa ccaactgcac aacattatcg gcaactgggg ctgggcaatc
    15661 gtcgttttga ccatcatcgt caaagccgta ctgtatccat tgaccaacgc ctcctaccgt
    15721 tcgatggcga aaatgcgtgc cgccgcaccc aaactgcaga ccatcaaaga aaaatacggc
    15781 gacgaccgta tggcgcaaca gcaagcgatg atgcagcttt acaaagacga gaaaatcaac
    15841 ccgctgggcg gctgtctgcc tatgctgttg caaatccccg tcttcatcgg cttgtactgg
    15901 gcattgttcg cctccgtaga attgcgccag gcaccttggc tgggctggat taccgacctc
    15961 agccgcgccg acccctacta catcctgccc atcattatgg cggcaacgat gttcgcccaa
    16021 acctatctga acccgccgcc gaccgacccg atgcaggcga aaatgatgaa aatcatgccg
    16081 ttggttttct ccgtcatgtt cttcttcttc cctgccggtt tggttctcta ctgggtggtc
    16141 aacaacctcc tgaccatcgc ccagcagtgg cacatcaacc gcagcatcga aaaacaacgc
    16201 gcccaaggcg aagtcgtttc ctaaatgccg cagcatgaaa aatgccgtct gaaacctgtt
    16261 cagacggcat ttttattgtt caccccctat cggggcggaa atcttcaacc cgcatacatc
    16321 acaaaaatcg tcgggcgttt tttcagattg ggcatttcct tcatcctgcg ccaatccgca
    16381 accgttttac tgaccaccaa ctgagtcggc aacgtcaaat ccgtagccgt acacaagcgc
    16441 gtttcaggat gcaggttttc caccgcatcg gcaagcagcg catcattgcg gtaaggcgtt
    16501 tcaataaaaa tctgcgtctc gccgcactgc cgcgaacgtt gctccaaagc attcaaactc
    16561 tgaatgcgct catttttttc agacggcaga taaccattaa acgcaaagtt ctgcccattc
    16621 gcacccgaag ccatcagcgc cagcagcagg ctggacgggc cgaccaaagg ccgtacttca
    16681 aaaccgtgtt tatgcgccaa tgccaccaaa ttcgcgcccg gatcggcaac agccgggcaa
    16741 cccgcctcgc tgacaatccc catactgcgc ccttcttgca aaggtttcag caattccggc
    16801 aaagtcttca aatccgtgtg ttcattcaac gtttgcagat tcagttcgcg tatcggcgtc
    16861 gttatcccca aatgcttcaa atgcgcacgc gccgtttttt ccgcttccac gacaaaatcc
    16921 gtcagcccga caaccgcccg ttgttcatgc tgcaacaggc acggcgtgtc aggcgtaccc
    16981 aaaggcgtag gaatcaaata caaaacagga gacatcattc cctcactcat cggttaaaaa
    17041 tgccgtccga acccttcaga cggcataaac gggcagttac aaaacatcca cgccctcgtt
    17101 tttcaaaaaa tcgaccagac ggaaaaccgg cagaccaatc aaggcattcg gatcggtact
    17161 ttcaatccgt tcgatcaaca gcgcgcccaa gccctcgctt ttcgccgcac acgaacaata
    17221 aaccgcatcc ggctcgcgct ccaaatagcg gaggatgtgc agctcgtcca actgcctcat
    17281 cacgaccacc gtcttatcga tatgccgatg catcctgccc gtaaccgtat ttagcagaac
    17341 gaccgcactg taaaactcaa tctccctgcc gctcaaatgc atcaacatct tttgcgcgtt
    17401 ggcaaggttc atcggcttgc cccactgcct gccgtcgcac cacgccacct ggtccgcacc
    17461 gacaatcaac gccccgggga aacgcccggc caacgaccgc gccttaccct cggcaaggcg
    17521 caatgccgtc tgaggggcgg attcccccaa catcggcgtt tcgtcaaaat cgggggatgc
    17581 cgcctgaaag gcaatgccga gcctttccat ctgttcgcgg cggaaaaccg aactcgtacc
    17641 caaaaccaaa ggcagttcca aacccatccc atcctcctta ccgttgaaaa cacgcccgaa
    17701 ggggcggtaa aatccagcca tgcgccgaaa cacggacacc cgccttcggc gtaccgcaac
    17761 atttttctta aaaatattga cgttagaaca tctaaattat atcatacccc gtttatgtca
    17821 gaccctaatt tgattgaccc ggaaattttt gccgccgaaa ggcagaacct gcaaggcagt
    17881 tttctgctgg aagaattgga cgagcgagtc agtttgcacg attatcccgc cgacaggcgg
    17941 accaaaatat cgtttacact gaccggcggt cgcgaccggc tgcaacgcct gttcctcgac
    18001 ctgaacgtca aagccgatat gcccctgatt tgccagagat gtatcaaacc catgccgttc
    18061 atgctcgatg aaagcagccg tatcgtcctg ttttccgacg aagagtcctt ggacgaatcc
    18121 atgcttgccg acgaagaact cgaaggcata ctgattgaaa aagaactcga cgtgcgcgca
    18181 ttggtagaag accaaatcct gatgtccctg cccttttcgc cgcgacacgg acactgcggc
    18241 aatacccttc cggaatccgc caaccaagac aaacccaacc cctttgctgt tttggcgggt
    18301 ttgaaaagca gttaattagg acacagttta tttatctagg agcttgaaat ggccgttcaa
    18361 caaaacaaaa aatccccttc caaacgcggt atgcaccgtt cgcacgacgc actgaccgcg
    18421 cccgcactgt ttgtcgacag cacaaccggc gaagtacacc gcccgcacca catctccccc
    18481 aacggtatgt accgcggtcg caaagtggtc aaagccaaag gcgaataatc cctattcgac
    18541 tgactgaaaa agccagaaca ttgccatgca attactggct ttttttgcat tggacgcacc
    18601 atccgtccaa actttcgcca tacgtcaaca cacaggggca aagcgttccg tataataccc
    18661 cgtgaaaata ttccaaaagc cccaaccacc aaggaaattc cgatgaaaca gaaaatctgg
    18721 tacacctacg atgacatcca ccgcgtcatc aaagcattgg cagaaaaaat ccggaacgcc
    18781 ggcgtcaaat acgatgccat gatcgctatc ggcggcggcg gctttattcc ggcacgcatg
    18841 ctgcgctgtt ttctggaaat tccgatttat gccgtaacca ccgcctatta cgacagcgac
    18901 agcgaaggac aagttaccga agaagtcaaa aaagtccaat ggctagaccc cgtccccgaa
    18961 gtcctgcggg gcaaaaacgt gctcgtcgtc gatgaagtgg acgacagccg cgtaaccatg
    19021 gagttctgcc tgaaagaact gctcaaggaa gacttcgaca ctgtcggcgt cgccgtcctg
    19081 cacgaaaaaa tcaaagccaa agcaggcaaa atccccgaag gcattcccta tttcagcggc
    19141 attaccgtag aagactggtg gatcaactat ccgtgggacg cactcgacat cgacgaacac
    19201 aaccgccttg ccgaagccgg ccgaggctaa ccctttcaga cggcatattt tccgaaccga
    19261 tgccgtctga agcccgcacg acccctgccg cagaccgaaa atctaccgga gaaaccccta
    19321 tgattacatt ggccgtagat gccatgggcg gcgaccaagg acttgccgtt accgtacccg
    19381 gcgcaaccgc attcctccaa gcacaccccg atgtccgcct gattatgacc ggcgacgaaa
    19441 cgcagctccg ccaagccctg aacgcggcag gcgcgccgat ggaacgcatc gacatctgcc
    19501 ataccaccca ggttgtcggc atggatgaat cccctcagtc cgccctaaag aacaaaaaat
    19561 actcctccat gcgcgttgcc atcaaccaag ttaaagaagg caaagcccaa gccgccgtat
    19621 ccgcaggcaa cacgggcgcg ctcatggcaa ccgcacgttt cgtcctcaag accatacccg
    19681 gcatcgaacg ccccgccatc gccaaattcc ttccttccga caccgaccac gttaccctcg
    19741 ccctcgacct cggcgcaaac gtcgactgca cacccgaaca gcttgcccaa tttgccgtca
    19801 tcggcagcga actcgtccac gcgctccatc ctcaaaaagg acagccgcgc gtcgggctgg
    19861 tcaacgtcgg cacagaagac atcaaaggta cggataccgt caaacaaacc tacaaactgc
    19921 tgcaaaacag caaactcaac tttatcggca acatcgaaag caacggcatc ctgtacggcg
    19981 aagcagatgt cgtcgtcgcc gacggctttg tcggcaacgt catgctcaaa accatcgaag
    20041 gcgcagtcaa attcatgagc ggagccatcc gccgcgaatt ccagagcaac ctgttcaaca
    20101 aacttgccgc cgttgccgcc ctacccgccc tcaaaggctt gaaaaacaaa ctcgatccgc
    20161 gcaaattcaa cggggccatc ctgctcgggc tgcgcggcat cgtcatcaaa agccacggcg
    20221 gcacagacaa aaccggtttc cgctacgcac tcgaagaagc ctaccacgaa gccaagtccg
    20281 ccggcctttc caaaatcgaa caaggcgttg ccgaacaact cgccgcactg gaagccgccc
    20341 aaaacgaaac cgccgccagt ctgtaacacg cacgatgccg tctgaacgcc cccgcccctt
    20401 tcagacggca tccggcaccc gtccaaacct gcgggcgcgg acggcgatgc gcctgtccgg
    20461 cacttcccaa atacttccct gtaaaataag gagtatttga aaaatgaaga cattagaaaa
    20521 acggatgaaa gctctagaca aacggatgat gaagttcgga aaatcccttg aaggcaggct
    20581 tgatgcccgt ctgattgaat ccgcattgga ttatattcat tattcggaac gttttttggc
    20641 ttttgacatc ctgtgtactt atatcgaaga tttcgatatc cggctgacgg aacaagaatc
    20701 ccgggaaatt tcttttatca acaaggaatt tgagatagaa agcacgtccg attaaccaat
    20761 aaagccaatg atttgataag aatgaaaaca tcgacggtcg tttttggcgg attttttatg
    20821 gcagacaacg gggagcgaat ccaaatcccc gttttggaaa atcctgacat tagggaaatc
    20881 aatcgctttt tttccgtatc aaattttgag aaaaaagccg gcgtccttgt tttcagaatc
    20941 atccccgagc cggaatttgg caataccgaa ttaactgtct attttgaaaa aggatattat
    21001 agtggattaa caaaaaccgg tacggcgttg ccccgccttg gctcaaaggg aacgattccc
    21061 taaggtgccc aagcaccaag tgaaccggtt ccgtactatc cgtactgtcc gcggcttcgc
    21121 cgccttgtcc tgatttttgt taatccacta tatttgccaa taattcaaac aattttagaa
    21181 ggcggggata ttaaagtaaa aaaccttaaa acagaaaatt acagcgggaa ggcaagggaa
    21241 atcttgggag attgctaccc tattgaacat atctctaaaa atatttctac aattcaaaat
    21301 atcatttccg aatttatcag acaaaaacaa acaccggcac caaataattt gatggaaacc
    21361 caacaatcaa gatgccgtct gaagcagctt gggctttcag acggcatttc cttcgcttaa
    21421 aacagcgtat cggcaacccc gccccgcccg tccacggcaa tccgcatctg aaaaccatct
    21481 gtatgccaaa ccacaccccc atccctgttt ccgtcatttg caccctgccc gtattgggca
    21541 atcatcggtt tttcgcttac aatagccgaa tctgaaccaa ctctctaaaa aggccgttcc
    21601 catgcagtat gcaaaaattt ccggcacggg cagctatctt cctgccaacc gcgtcagcaa
    21661 tgacgacctt gcccaaaagg tagatacctc tgacgagtgg attaccgcgc gtacgggcat
    21721 caaattccgc catattgcag ccgaaaacga aaaaaccagc gatcttgcag ccgaagcggc
    21781 gcggcgcgct ttggcagatg ccaaattaaa tataaacgac attgatttga ttatcgtggc
    21841 gacggcaacg ccggatatgc agtttccttc taccgccacc atcgtgcagc aaaaattggg
    21901 catcaccaac ggctgccccg cgtttgacgt gcaggcggtg tgcgcaggct ttatgtacgc
    21961 gctgactacg gcaaatgcct acattaaaag cggtatggcg aaaaacgcgc tggtcatcgg
    22021 cgcggaaacc ttcagccgca tcgtcgattg gaacgaccgc acaacctgcg tgctgttcgg
    22081 cgacggcgcg ggcgcggtgg ttttaagcgc gtccgacaaa ccgggcatca tccacagcaa
    22141 actcaaagcc gacggcaatt atctgaaact cttaaacgtc cccgggcaaa tcgcctgcgg
    22201 caaagtttcc ggttcgccgt acatttcgat ggacggtccc ggcgtgttca agtttgccgt
    22261 caaaatgctg tccaaaatcg ccgatgacgt tatcgaagaa gcaggttaca ccgccgaaca
    22321 aatcgactgg attgttcccc atcaggcaaa ccgccgcatt atcgaatcga ccgcgaaaca
    22381 tttgggtttg agtatggaca aagtcgtcct gaccgtccaa gaccacggca acacgtccgc
    22441 cgcatccatt ccgctggctt tggacgcggg catccgcagc ggacaaatca aacgcggtca
    22501 aaacctgctg ctcgaaggca taggcggcgg tttcgcgtgg ggcgcggtgc tgttgcaata
    22561 ttgaaaccgg tgccgtctga aacaggcttt cagacggcat ttcccatatc atgaagcggc
    22621 aggctttctt caaaccgatg gcgtgtgcgg catttctgtc cgccgtttcg ctgcgcctcc
    22681 ccgtattggg cgcgtgttac gcaatattgt ccctctatgc gtttgcactt tacggcatcg
    22741 acaaacggcg tgccgtgcgg ggaaaacgcc gcattcccga acaccgcctg ctcctgcctg
    22801 ccttgttcgg cggttggacg ggcgcatact tgggtagtag gatgttcagg cataaaacgg
    22861 cgaaaaagcg ttttgttgtg ctgttccgtc tgactgtttc gggcaatgtc ctggcgacct
    22921 gcatcctgat tgattatttc gttccgcccg aactttttgt aaaactcggg caacatctct
    22981 gacaatccaa cccaacaaag gaatactatg tctttcgcat tcttcttccc cggacaaggt
    23041 tcccaaagcc tcggcatgat gaacggcttt gccgaacacg ccatcgtcaa aaacacattt
    23101 gacgaagcct ccgccatatt ggggcaggac ttgtgggcga tgattaacgg cagcgatgcc
    23161 gaaatcatcg gtcaaacagt caacacccag cccattatgc tcgccgccgg cgttgccgtt
    23221 taccgcgcct atttggaagt gggcggcaaa acgcctgccg ccgttgccgg acacagcctc
    23281 ggcgaataca ccgcgcttgt cgccgccgaa gcattggatt ttgccgatgc cgtcaaactc
    23341 gtccgcctgc gcgccgaact gatgcagtcc gccgtaccgc aaggcgtagg cgcaatggcg
    23401 gccattttgg gtttggaaga tgaacaggtc aggcagattt gtgccgaatc cgcacagggc
    23461 gaagtggtcg aagccgtcaa cttcaactcg cccggacaag tcgtgattgc aggcaacgcc
    23521 gccgccgtcg gacgcaccat ggctgccgcc aaagaagccg gagccaaacg cgccctgccg
    23581 ctgccggtat ccgttccttc ccattgcagc ctgatgaaac ccgccgccga caaacttgcc
    23641 gaagcactca aaaccgttga aatcaaacag ccgcaaatcc gcgtcatcca caacgccgac
    23701 gttgccgcct acgatgatgc cggcaaaatc aaagacgcgc tcgtccgcca gctttacagc
    23761 cccgtgcgct ggacggaaac cgtcaacgcc cttgtttcag acggcattgc cgaatccgcc
    23821 gaatgcggtc cgggcaaagt gttggcgggc ttggcaaaac gcatcaacaa ggccgccgct
    23881 tgcagcgcac tgaccgatgc cggacagatt accgccttta tcgaagcgca ctgacttcgt
    23941 tccgcaaaaa gcagcctgcc ctcttcaggc tgcttttcac gtccgaacgg caaacagccg
    24001 catatttgcg ctataattca tccctaccaa accaccgaca gcggctgccg ttgcagttcc
    24061 cgccctaccg atatgataga aaaactgact ttcggactgt ttaaaaaaga agacgcgcgc
    24121 agctttatgc gcctgatggc gtacgtccgc ccctacaaaa tccgcatcgt tgccgccctg
    24181 attgccattt tcggcgttgc cgccaccgaa agctacctcg ccgccttcat cgcccccctg
    24241 atcaaccacg gcttttccgc acccgccgcg ccgcccgagc tgtccgccgc cggcatcctt
    24301 tccaccctgc aaaactggcg cgaacagttt acctatatgg tttgggggac ggaaaacaaa
    24361 atctggaccg tcccgctctt cctcatcatc ctcgtcgtca tccgtggcat ctgccgcttt
    24421 accagcacct atctgatgac ttgggtctcc gtgatgacca tcagcaaaat ccgcaaagat
    24481 atgtttgcca aaatgctgac cctttcctcc cgctaccatc aggaaacgcc gtccggcacc
    24541 gtactgatga atatgctcaa cctgaccgaa cagtcggtca gcaacgccag cgacatcttc
    24601 accgtcctca cgcgcgacac gatgatcgtt accggcctga ccatcgtcct gctttacctc
    24661 aactggcagc tcagcctcat cgtcgtcctg atgttccccc tgctctccct gctctcgcgc
    24721 tactaccgcg accgtctgaa acacgtcatt tccgactcgc aaaaaagcat aggcacgatg
    24781 aacaacgtga ttgccgaaac ccatcaggga caccgcgtcg tcaagctgtt caacgggcag
    24841 gcgcaggcgg caaaccggtt cgacgcggtc aaccgcacca tcgtccgcct cagcaaaaaa
    24901 atcacgcagg caacggcggc acattccccg ttcagcgaac tgattgcctc gatcgccctc
    24961 gccgtcgtca tcttcatcgc cctgtggcaa agccaaaacg gctacaccac catcggcgaa
    25021 tttatggcat tcatcgtcgc gatgctgcaa atgtacgccc ccatcaaaag ccttgccaac
    25081 atcagcatcc ctatgcagac gatgttcctc gccgccgacg gcgtatgtgc atttctcgac
    25141 accccgcccg aacaggacaa aggcacgctc gcgccgcagc gtgtcgaagg gcgcatcagc
    25201 ttccgcaacg tcgatgtcga ataccgttca gacggcatca aagccctcga caacttcaac
    25261 ctcgacatca gacaaggcga acgcgtcgcc ctggtcggac gttccggcag cggcaaatcc
    25321 accgtcgtca accttctgcc ccgctttgtc gaaccgtctg ccggcaacat ctgcatagac
    25381 ggtatcgaca tcgccgacat caaactcgac tgcctgcgcg cccaattcgc cctcgtctcc
    25441 caagacgtat tcctgtttga cgacaccctg tttgaaaacg tccgatacag ccgtcccgac
    25501 gcgggcgaag ccgaagtcct gtccgccctc caagccgcca acctgcaaag cctgatcgac
    25561 gcatccccgc tcggactgca ccagcccatc ggatcgaacg gcagcaactt atccggcgga
    25621 cagcggcaac gcgtcgccat cgcccgcgcc attttgaaag acgcgccgat attattattg
    25681 gacgaagcca ccagcgcatt ggacaacgaa tccgaacgcc tcgtccaaca agcgctcgaa
    25741 cgcctgatgg aaaaccgcac cggcatcatc gtcgcccacc gcctgaccac cgtcgaatcc
    25801 gccgaccgca tcatcgtcat ggatggcggc aaaatcatcg aacaaggcac acacgatcaa
    25861 ctcatgttcc aaaacggcta ctacaccatg ctgaggaaca tctccggaaa agataccgcc
    25921 gccgttcaga cggcataaac aaaatgccgt ccgaaatggt ataatcgccc cgaccccttc
    25981 agacggcact atatccgccg acccatccga ttatcttcaa tcactgtaaa acccattatg
    26041 acccaagaca aaatcctcat cctcgacttc ggttctcaag ttacccggct gattgcccgc
    26101 cgcgtgcgcg aagcccacgt ttactgcgaa ctgcattcct tcgatatgcc tttggacgaa
    26161 atcaaagcct tcaaccccaa aggcatcatc ctttccggcg gccctaattc tgtttacgaa
    26221 tccgactatc aagccgatac cggtattttt gatttgggca ttccggtttt gggcatctgc
    26281 tacggcatgc agtttatggc gcaccacttg ggtggcgaag tgcagcccgg caaccagcgc
    26341 gaattcggtt acgcgcaagt caaaaccatc gacagcggac tgacacgcgg cattcaagac
    26401 gacgcgccca acacactcga cgtatggatg agccacggcg acaaagtgtc caaactgccc
    26461 gacggtttcg ccgtcatcgg cgacactccg tcctgcccga ttgccatgat ggaaaacgcc
    26521 gaaaaacaat tctacggcat ccagttccac cccgaagtta cccacaccaa acaaggccgc
    26581 gccctgttga accgctttgt cttggacatc tgcggcgcgc aaccgggctg gacgatgccc
    26641 aactacatcg aagaagccgt tgccaaaatc cgcgaacaag tcggcagcga cgaagtgatt
    26701 ttaggtctgt ccggcggcgt ggactcttcc gtagccgccg cgctgattca ccgcgccatc
    26761 ggcgaccaac tgacctgcgt gttcgtcgat cacggtttgt tgcgcctgaa cgaaggcaaa
    26821 atggtgatgg atatgttcgc ccgcaacttg ggtgtgaaag tgatacacgt cgatgccgaa
    26881 gggcagttta tggcgaaact cgccggcgtg accgaccctg agaaaaaacg caaaatcatc
    26941 ggcgcggaat ttatcgaagt atttgatgcc gaagagaaaa aactcaccaa cgccaaatgg
    27001 ctggcgcaag gcacgattta ccccgacgta atcgaatccg ccggtgcgaa aaccaaaaaa
    27061 gcccacgcca tcaaatccca ccacaacgtc ggcggcctgc ctgaaaatat gaagctcaaa
    27121 ctgcttgagc ccttgcgcga cttgttcaaa gacgaagtgc gcgagttggg cgtggctttg
    27181 ggcctgccgc gcgaaatggt gtaccgccac cccttcccgg gccccggttt gggtgtgcgc
    27241 atcttgggcg aagtgaaaaa agaatacgcc gacttgctgc gtcaggcgga cgatattttc
    27301 atccaagaat tacgcaatac taccgacgaa aacggcacgt cttggtatga cctgaccagc
    27361 caggcatttg ccgtgttcct gcccgtcaaa tccgtcggcg tgatgggcga cggccgcact
    27421 tactactacg tcgtcgcact gcgcgcagtc atcaccagcg actttatgac tgcacactgg
    27481 gcagagctgc catactcact gctcggccgc gtgtccaacc gcatcatcaa cgaagtcaaa
    27541 ggcatcaacc gcgtggtgta cgatgtcagc ggcaaaccgc ccgccaccat cgagtgggaa
    27601 taaacagcaa acagggctgc accgtccggc gcagtccttc gattatcgga aaaaaggaaa
    27661 aaatatgagc acacaagatt taagcggcaa aatcgctttg gtaaccggcg catcgcgcgg
    27721 catcggcgcg gcaattgccg acacactggc ggcagccggt gccaaaatca tcggtacggc
    27781 aaccggcgag agcggtgcgg cggcgattag caaacgtctg gcacaatggg gcggcgaagg
    27841 ccgcgtatta aattccgccg aacccgaaac cgtcgaaaac ctgattgccg acatcgaaaa
    27901 aacgttcggc aaactcgaca ttctggtcaa caacgccggc atcacccgcg acaacctgtt
    27961 gatgcgtatg aaagaagaag agtgggacaa catcatgcag gtcaacctca aatccgtgtt
    28021 ccgcgcttct aaagccgtct tgcgcggtat gatgaaacaa cgttccggcc gcatcatcaa
    28081 catcacctcc gtcgtcggcg tgatgggcaa tgccgggcaa accaattatg ccgccgcaaa
    28141 agcgggcttg atcggttttg ccaaatctat ggcgcgcgaa gtcggcagcc ggggcattac
    28201 cgtcaactgc gtcgccccgg gctttatcga taccgatatg acccgcgccc tgcccgaaga
    28261 aacccgccaa acatttaccg cccaaaccgc cttgggcaga ttcggcgacg cgcaagacat
    28321 cgccgatgcg gttctgttcc tcgcttccga tcaagcgaaa tacatcaccg gtcaaacgct
    28381 gcacgtcaac ggcggtatgc tgatgcccta acggacaggc ttttcaacca tgccgtctga
    28441 agccctttca gacggcattt gcattcccaa acaaaatgaa cactcaccac cacctgccct
    28501 gcccctgcgg ttcaggcaca agctatgccg gctgctgccg accgcttcat ctgcgccaaa
    28561 tcctgccgcc caccgccgaa gccctcatgc gttcgcggta cggcgcgtat gtgctgcacc
    28621 ttatcgacta catcatcgct actaccgttc cggcgcaaca aacattcctc gatgccgccg
    28681 aactgatgca gtggagcaga gaagccgaat ggctgggctt gaatgtcatc gcacaccgca
    28741 acctcggcaa acagcacgcc caagtcgaat ttgaagccta cttccaagac ggcggaaacc
    28801 gaacagtgca tcacgagctg tcggcattcg tgaaaatagc ggagcaatgg tatttcatcg
    28861 atccgactgt tccgctgcct accatgaaac agccctgcat ttgcggttcg ggcaaaaaat
    28921 tcaaagcctg ctgcggcaaa tatctgcaac ctgtcgcata aaaatgccgt ctgaacgttc
    28981 agacggcatt ttcaacgcgc aaaaaaaacc attcatacca agggtaagta tgaatggtca
    29041 atacattgcg ggaaaacatc ttacttgctg cactgccgaa aagggagaaa cggcagtgtt
    29101 aaccagcaaa agcattgtac ctttattaat gttaaaaaac attaattttg aaaatatatt
    29161 aacgaatata tctggaacct actggttttc ccgtatccac ccgacccagc gttcaaacag
    29221 cttcggttcg agcgcggcga cgaccgagcg tttgaacacg tgttcaccac tccaaaaccc
    29281 gtcgccttcc aaagtcgtca gcctgccgcc cgcctcctcg aaaatcaacg cacccgcagc
    29341 ataatcccac agcttctgcc cgccgtggac ataaacatca taacgcccgc acgccagata
    29401 acaccagtcc agcgtgctgc tgcccatact gcgtatcgtc ccgaaaggcg cgagcgtact
    29461 catgcggctg gaaagtttgc ccgaacgcag atatttgatt tccacgcccg caatcgcctc
    29521 attgagtttt ttatccacga gacgcaaagg caggcgtgtc ccattaagaa acgcaccctg
    29581 cccgcgttcg gcataaaaac attcgccgct gaccggattg tagattacgc ccaattcggc
    29641 gcgcccgttg cggacaaacg ccaccgacac ggcaaaatgc ggcagcccgt tgacaaaatt
    29701 gttcgtcccg tctatcggat cgacaatcca cagccccttt tcccccgaat attgttccca
    29761 caaagccgac tgttcctgcc gcgacatttc ctcgcccaac atcgggcaat cgatcagaag
    29821 cggcaacgcg gcggcaaatg ccgtctgcgc ggcaatgtcc gcctcgctca acatcgaacc
    29881 gtcttccttg cggcgggacg gcgtattcaa aaaacgcggc ataatttcgg tttgcgcgat
    29941 atggcgcacg actttctgca aacggtgtaa cacttcctac tgtcctcata ttttgaactt
    30001 gcggcgcgcg aacgtataat gtccgtttcc atcacgccgc tgcgacggat tataaccgtc
    30061 cgaaccgcca aaaactatgc ccagattcta cctgcccgaa aacctttccg tcggacaaac
    30121 cgtcgccctg cccgacaaca tcgtccgcca cctcaacgtc ctgcgcgtcc gccccaacga
    30181 aaacatcacc ctcttcgacg gcaaaggcaa ggcacatacc gcacggctga ccgttttgga
    30241 aaaacaccgc gccgaagccg aaatcctgca cgaagacaca accgacaacg agtccccgct
    30301 caacatcacg ctcatccaat ccatttcctc cggcgatcgc atggatttca ccctgcaaaa
    30361 aagcgtcgaa ctcggcgtaa ccgccataca gcccgtcatc agcgaacgct gcatcgtccg
    30421 cctcgacgga gaacgcgccg ccaaacgcct cgcacgctgg caggaaatcg tcatctccgc
    30481 gtgcgaacaa agcggcagga acaccgttcc ccccgtactg cccatcatcg gctaccgtga
    30541 agcactcgac aaaatgccgt ctgaaagcac caggctgatt atgagcatca accgcgcccg
    30601 caaactcggc gacatccgcc acccgtccgg cgcaatcgtc tttatggtcg ggcccgaagg
    30661 cggctggaca gaacaggaag aacaacaggc atttgaagcc ggctttcagg cggttacact
    30721 cggaaaacgg attttacgca cagaaaccgc cccactcgcc gccatcgccg cgatgcagac
    30781 gctttggggc gattttacct agcagatgaa aaaacacggg attttatccg aaaaagcaac
    30841 aatccccccg ccgtcattcc cgcgaaagcg ggaatctaga aatttaacgt tgcggtgatt
    30901 tatcg
//
LOCUS       DAWXHA010000008        30154 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.008, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000008 DAWXHA010000000
VERSION     DAWXHA010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30154
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.008"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(56..415)
                     /gene="rplT"
                     /locus_tag="AABD07_000312"
     CDS             complement(56..415)
                     /gene="rplT"
                     /locus_tag="AABD07_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HFB2354918.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(428..625)
                     /gene="rpmI"
                     /locus_tag="AABD07_000313"
     CDS             complement(428..625)
                     /gene="rpmI"
                     /locus_tag="AABD07_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HFB2354919.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(772..1293)
                     /gene="infC"
                     /locus_tag="AABD07_000314"
     CDS             complement(772..1293)
                     /gene="infC"
                     /locus_tag="AABD07_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HFB2354920.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(1311..3224)
                     /gene="thrS"
                     /locus_tag="AABD07_000315"
     CDS             complement(1311..3224)
                     /gene="thrS"
                     /locus_tag="AABD07_000315"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HFB2354921.1"
                     /translation="MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKL
                     VDACDPIVEDSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     EDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKDYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(3277..3353)
                     /locus_tag="AABD07_000316"
     tRNA            complement(3277..3353)
                     /locus_tag="AABD07_000316"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3317..3319),aa:Val,seq:gac)
     gene            3532..4647
                     /gene="tgt"
                     /locus_tag="AABD07_000317"
     CDS             3532..4647
                     /gene="tgt"
                     /locus_tag="AABD07_000317"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HFB2354922.1"
                     /translation="MLKFTLHKKDGLARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGETTREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEEFDFPGLAVGGLSV
                     GEPKPEMYRMLHAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMREAVEQGKFADWQAQFHENRARGVD"
     gene            4729..5739
                     /locus_tag="AABD07_000318"
     CDS             4729..5739
                     /locus_tag="AABD07_000318"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HFB2354923.1"
                     /translation="MLPFLPEPSLSYTQQNRTAVLLLNLGTPDAPTAQAVRPYLKSFL
                     TDRRIVELPKWLWYPILHGLVLTFRPKKSAHAYEKIWFKEGSPLEVYTARQAAALAER
                     MPDLIVRHAMTYGNPSIADVLAELKSQGVGRLLAIPLYPQYAASSSGAAVDKVCEQLL
                     LQRNQMSVRTISRFYDDAGYIDAMKNHILRYWAEHGRGKKLMLSFHGVPQKHYDLGDP
                     YPDECRHTAKLLAEALELTEDEYTVSFQSQFGRAKWVTPSTQDLFGKLPKQGVTELDV
                     FCPGFLADCLETMEEIALMGREQFYEAGGKNYRYIPCLNDNPDWIDALVALAEENLGG
                     WR"
     gene            5930..6397
                     /locus_tag="AABD07_000319"
     CDS             5930..6397
                     /locus_tag="AABD07_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c2"
                     /protein_id="HFB2354924.1"
                     /translation="MNTTRLPTAFILCCLCAAASAADNSIMTKGQKVYESNCIACHGK
                     KGEGRGTAFPPLFRSDYIMNKPHVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKNQTDKMPSETGNPASDGIQTKPF"
     gene            complement(6394..8124)
                     /locus_tag="AABD07_000320"
     CDS             complement(6394..8124)
                     /locus_tag="AABD07_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HFB2354925.1"
                     /translation="MDWMNSLFLLGGALLFLSVVSTTLSARLGMPLLLVFLAVGMLAG
                     EEGVGGIAFNNVVMANFISQLALAVILLDGGLRTQLSSFRIALKPASVLASWGVFATV
                     LPLGLFATFYLGLDWKFGVLMAAIVGSTDAGAVFSLLRNSGVRLNERVQATLEIESGA
                     NDPMAVFLVTALITMIMQPAESGAAAFVRMLALQIGFGLLTGWAGGKILAKLVRRLNL
                     AEGLYALMIVSGGLLVFAFTNTIGGSGFLAVYLAGIIVGNQRNRATEHVLRVMDGLAW
                     LAQATLFVMLGLLVSPAGVLDRAAEALAIAAFLMLVARPLAVFGGLWKFNYSLREKAY
                     ISWLGLRGAVPISLAMMPLVMGVPNSHLLFDVAFAVVVLSLLIQGTTIPVMARLLKVA
                     MPNKPEPKDTHDIWLAEKEIVRMSAFKVVAESEAEGHHPDTVEPISDSFDARCFALIR
                     NGSRIEMQSDTVLQAEDLAWYILADGKVDKMAKYFTETGIGVRENFDFFGEFVVSPAA
                     RSGDLALAYGLKLEAGEEGLSLAELFDKRSDSQEPVEGDRIDIGGFMLTAKEVDGGGN
                     IGSMGLKVPR"
     gene            8319..9036
                     /locus_tag="AABD07_000321"
                     /pseudo
     CDS             8319..9036
                     /locus_tag="AABD07_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519693.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
     gene            9128..10666
                     /gene="lnt"
                     /locus_tag="AABD07_000322"
     CDS             9128..10666
                     /gene="lnt"
                     /locus_tag="AABD07_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HFB2354926.1"
                     /translation="MFSKLDKYWQHPALYWPLLILFAAATPFAFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAASSAYLFGLTAYTAQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPQGIKTGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLAIDNTARSGKRLLPAILIAALLAAGYTAQQT
                     DFTRPDGSRSTVALLQGNIAQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPI
                     MRQNLPENILAQFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPLLTTPLYKMMDMPLSDFRKGGGKQSAMMMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANVSNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYIGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            10930..11793
                     /gene="rpoH"
                     /locus_tag="AABD07_000323"
     CDS             10930..11793
                     /gene="rpoH"
                     /locus_tag="AABD07_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HFB2354927.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNVLSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(11950..12426)
                     /locus_tag="AABD07_000324"
     CDS             complement(11950..12426)
                     /locus_tag="AABD07_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HFB2354928.1"
                     /translation="MESRAFVAARKGNVSSKISKTRTGYGFFAKMIFASRWLQVPIYA
                     GLTVVRAICAYKFLKSLKHLVMNLDVSDENAIMLAVLNLIDVVMIANLLTMVQIGGYE
                     SFVSRLRIDDHPDRPEWLSHVNAPVLKVRLSMSIIGIHPSICSKHLSIPPICRKSS"
     gene            12526..13410
                     /locus_tag="AABD07_000325"
     CDS             12526..13410
                     /locus_tag="AABD07_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HFB2354929.1"
                     /translation="MSSGNIRIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRHLENGIREQISSHLARGKVECKIQIQDAENGNQSLELNRVLVGQLAEINKNLR
                     KHYDLAKLGVADILRFPGVLASQKENTEALAKTIVELADKALKDFTAARRREGKKLGE
                     HLLQRIKNMEEIIDALSEIFPALVEAHKEKIRTRLAEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(13501..14016)
                     /locus_tag="AABD07_000326"
     CDS             complement(13501..14016)
                     /locus_tag="AABD07_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFB2354930.1"
                     /translation="MMILKTAPLKRRFAAILYEMLLVGAATCLAALLAGIAAIFLNPV
                     SIAVSALVTSILIMGAWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALVWLILPWGFALLNPDRQFLYDFLA
                     GTRLVDVKEQS"
     gene            complement(14092..14511)
                     /locus_tag="AABD07_000327"
     CDS             complement(14092..14511)
                     /locus_tag="AABD07_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354931.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(14632..15630)
                     /locus_tag="AABD07_000328"
     CDS             complement(14632..15630)
                     /locus_tag="AABD07_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HFB2354932.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEAVDALRAAAKKQGY
                     LNREAYTADASFDWNELLQTAGNAGLFADLKLLELHIPNGKPGKNGGEALQDFAARLP
                     EDTVTLVLLPKLEKTRLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIE
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHAVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVPRVCRLLDGLEEEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKQLVVSLAE"
     gene            complement(15632..16111)
                     /locus_tag="AABD07_000329"
     CDS             complement(15632..16111)
                     /locus_tag="AABD07_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354933.1"
                     /translation="MNKIFLTAAALVLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRILDYADNEILGKQEEEETLWAEMRQDVAEQIVRRLTFLKAE"
     gene            complement(16163..16942)
                     /gene="pgeF"
                     /locus_tag="AABD07_000330"
     CDS             complement(16163..16942)
                     /gene="pgeF"
                     /locus_tag="AABD07_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HFB2354934.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDDPETVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALDGTPDADAS
                     VDDTGKAVCAVMTADCLPVLFCDRAGTAVAAAHAGWSGLAGGVLQNTIAAMKVPPVEI
                     MAYLGPAISADAFEVGQDVFDAFCTSMPEAAAAFEPIGGGKFLADLYALARLILRREG
                     VGGVYGGTHCTVLERDIFFSYRRDGATGRMASLIWLDGNAV"
     gene            17127..17318
                     /locus_tag="AABD07_000331"
     CDS             17127..17318
                     /locus_tag="AABD07_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354935.1"
                     /translation="MLQQGTAHQAPHCVLPERGCPPIRFYRYKQTGFNRKGMGIKSIS
                     DTSRAIPSENQSPLSDGIV"
     gene            17536..18342
                     /locus_tag="AABD07_000332"
     CDS             17536..18342
                     /locus_tag="AABD07_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HFB2354936.1"
                     /translation="MFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLPSKL
                     LNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLM
                     LAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKPTDALPLVSVAAIVLII
                     GAVVGASKGKIMESGLLIFAVVALRNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQN
                     SGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(18495..19619)
                     /gene="rluD"
                     /locus_tag="AABD07_000333"
     CDS             complement(18495..19619)
                     /gene="rluD"
                     /locus_tag="AABD07_000333"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HFB2354937.1"
                     /translation="MQNTSFDNESDYSDDSDFASASGTENRIGLTVPPELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MDLDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAAVKFGGKPAVTHVKVLERYLAHSYIECSLGTGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            19618..20421
                     /locus_tag="AABD07_000334"
     CDS             19618..20421
                     /locus_tag="AABD07_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HFB2354938.1"
                     /translation="MKKILLTVSLGLALSACATQGTADKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEESL
                     AILELAYKKLDKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(20491..22710)
                     /locus_tag="AABD07_000335"
     CDS             complement(20491..22710)
                     /locus_tag="AABD07_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HFB2354939.1"
                     /translation="MFRRWFLPCWVVGVAVSFALSVVPHWPFWLAAFAVLAVLARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWRAEAVSGVPLTVEVTDMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGVGGV
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWRQADADGGLSDGIGLMRALSVGEQSALRP
                     GLWQAFRPLGLTHLVSISGLHVTMVAVLFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPLAVLGVG
                     TWLSFGLVAALIWACAGRLYEGKRQTAVRGQWAASVLSLVLLGYLFASLPLVSPLVNA
                     VSIPWFSWVLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLADVSPEFAVAAAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVSYRPEAVPENEAAVTVWDAGQGLSVL
                     VRTANRHLLFDTGTVAAAQTGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLRPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRVYKFYWQKKPFE"
     gene            22742..23017
                     /locus_tag="AABD07_000336"
     CDS             22742..23017
                     /locus_tag="AABD07_000336"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354940.1"
                     /translation="MIKQSHKTVITRFENDKNANEKPQYYPRQRQTFHRHSRKSGNPK
                     TKSRRNLSERTEPQKPASHLRLNNRTKKAEIKTSGFFFKLAIKHQNE"
     gene            23096..27694
                     /locus_tag="AABD07_000337"
     CDS             23096..27694
                     /locus_tag="AABD07_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HFB2354941.1"
                     /translation="MKAKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWSASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLNTYKDKNRFSSFVRIGAGRQLVYEKGVYHQEGNEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNKQYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADKIKQHDNAGTVKG
                     NGEHHWKTTGTNSHIGSTAVRLANNEGDANNGQNVTFEDNGTLVLNQNINQGAGGLFF
                     KGDYTVKGANNDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQG
                     QLKVGDGTVILNQKADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRL
                     DANGNDLTFEHIRNVDEGARIVNHNTGHASTITLTGKSLITNPNSLSVHSIQNDYDED
                     DYSYYYRPRRPIPQGKDLYYKNYRYYALKSGGNVNAPMPENGVAENNDWVFMGYTQEE
                     AKKNAMNHKNNQRISGFSGFFGEENEKGHNGALNLNFNGKSAQNRFLLTGGANLNGKI
                     SVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKAAEIAVNQ
                     SASFSSGRNVSDITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTGNLSDKALN
                     SFDATRINGNVNLNQNAALVLGKAALWGKIQGQGNSRVSLNQHSKWHLTGDSQVHNLS
                     LADSHIHLNNASDAQSANKYHTIKINHLSGNGHFHYLTDLAKNLGDKVLVKESASGHY
                     QLHVQNKTGEPNQEGLDLFDASSVQDRSRLFVSLANHYVDLGALRYTIKTENGITRLY
                     NPYAGNRRPVKPAPSPAANTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEALR
                     QQAKAEQVKRQQAAEAEKVARQKDEEAKRKAAEIARQQEEARKAAELAAKQKAEAERK
                     ARELARQKAEEASHQANAKPKRRRRRAILPRPPAPVFSLDDYDAKDNSESSIGNLARV
                     IPRMGRELINDYEEIPLEELEDEAEEERRQATQFQPKSRNRRAISSEPSSDEDASESV
                     STSDKHPQDNTELHEKVETAGLQPRAAQPRTQAAAQADAVSTNTNSALSDAMASTQSI
                     LLDTGASLTRHIAQKSRADAEKNSVWMSNTGYGRDYASAQYRRFSSKRTQTQIGIDRS
                     LSENMQIGGVLTYSDSQHTFDQAGGKNTFVQANLYGKYYLNDAWYVAGDIGAGSLRSR
                     LQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYSRLSSADYKLGDDSVKVSS
                     MAVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGVNVGGKSFAYKADNQQQYS
                     AGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
     gene            complement(27770..28972)
                     /gene="trpB"
                     /locus_tag="AABD07_000338"
     CDS             complement(27770..28972)
                     /gene="trpB"
                     /locus_tag="AABD07_000338"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HFB2354942.1"
                     /translation="MKNYHAPDEKGFFGEHGGLYVSETLIPALKELEQAYNEAKNDPE
                     FWAEFRRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     ARRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VIGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     AQMQEATGRQPDVAVACVGGGSNAIGLFYPYIEEENVRLVGVEAGGLGVDTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIEL"
     gene            complement(29055..29717)
                     /locus_tag="AABD07_000339"
     CDS             complement(29055..29717)
                     /locus_tag="AABD07_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HFB2354943.1"
                     /translation="MSAALPVGGLNVSENLLEIETHPFDPVLPPKAAVMMMGTFPPKE
                     DKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFRMPSHGEAAHSEKAFDAEKIKAFLHER
                     GIASCPTVLKAAREHGNASDKFLKVVETVDLAAVLAKIPDCRHICTTGGKATEILLDI
                     QGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAFFEMAGLCEK
                     QL"
     gene            29960..>30154
                     /locus_tag="AABD07_000340"
     CDS             29960..>30154
                     /locus_tag="AABD07_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase"
                     /protein_id="HFB2354944.1"
                     /translation="MKEHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRD"
BASE COUNT         7755 a         8585 c         7235 g         6579 t
ORIGIN      
        1 aatttccgca aacaaagaaa aaaggaagcc gcagcttcct tttcaatttt ttggattaag
       61 cagccaaagc agctttggct ttttcaacca attgtgcaaa agcggcttta tcgaacacgg
      121 ccaaatcagc caatactttg cggtcgattt cgatagaggc gcgtttcaga ccgttcataa
      181 atttgctgta agacaacccg ttttcacgcg cacctgcatt gatacgaaca atccacaatt
      241 gacggaattg gcgtttgcgt tggcggcggt cacggtatgc gtattgacca gctttcatta
      301 ccgcctgctt ggcaacgcgg taaacgtttt tacgacgacc acgatagcct ttggctaacg
      361 cgaagatttt ttggtgacgg gcacgggcgg taacaccgcg ttttacgcgt ggcatattct
      421 aaactcctta agcgtagggt aacattttag caacagaagc caaatcgcga tcatttacca
      481 tagaggtacc gcgcagttgg cgtttgtttt tggtggtctt tttagtcaag atgtggcgtt
      541 tgaacgcatg agcgcgtttc acaccgccgt tacccagtac tttaaagcgt tttttcgcgc
      601 tagacttggt tttcatttta ggcatgggaa aactccattc gttatcggat aaggcattag
      661 ggggttttaa aacatcggtt tcaaacactt gaacccacaa tgccacggtt ttttgccgca
      721 attgaaaact tactccgaag cggcaatcgg agtaagcgga aaattatagc tttatttttt
      781 cttcggcgca atcatcatca ccatttgacg gccttccatt ttgggaaagg actcgatttg
      841 cgccacttca gccaaatctt cttttacacg ttccaaaagt tgcgcgccga gttgctggtg
      901 agccatttca cggccgcgga aacgcaatgt cactttgact ttatcgccgt cggcaaggaa
      961 gcggttgatg ttgcgcatct tgatttgata atcgccctca tctgtacccg gacggaattt
     1021 gatttcctta atttgcacct gcttttggtt tttcttggct tcgtcgcgct tcttggcttg
     1081 ttggtatttg tatttaccgt aatccatcag tttgcacaca ggaggtttag cagttgggga
     1141 aatctctacc aaatcgacat cctgcccttc ggccatagcc aaagcttcac gaactgaaac
     1201 gacaccaagc tgttcgcctg actcactgat taaacgcact tctttggcgg taatttcacc
     1261 gttgattcgt gcttcgcgtt cttgagcgat gatgaatact cctataaaaa ttaatgattg
     1321 acgagggcat cagtgatttc ttgctgcaat tgcgcaatga aatcatccaa atccaaagaa
     1381 cccaagtctt ccgctttgcg gcgtaccgca actttgtttt cttgtttctc tttatcgccg
     1441 ataacgattt gataagggaa acggtattgg ctgttgtcgc ggattttgta accgattttt
     1501 tcattacgca aatccaactc ggcgcggaag cctgccgcct gcaatttggc agcaacttcc
     1561 cgacaataat ctgcctgatt ttcggtgatg ttcataatca ccatttgaac cggtgcaagc
     1621 cataacggga aagagcctgc atggttctca atcagaatgc cgacaaaccg ctccaaagaa
     1681 cctaaaatgg cgcgatgcaa cataacaggc cgcgctcggt cgttgttttc tgttacatat
     1741 tctgcatcca agcgttccgg caagacaaaa tccagttgta atgtaccgca ttgccaagaa
     1801 cgacccaagg catctttgac gtgatattcg attttaggcc cgtaaaacgc accctcgccc
     1861 ggcaattcgc cccattccac gccgcaggca gtcaatgcct cgcgcaaacc ctgctctgcc
     1921 ttatcccaca cgtcgtctga acctgcgcgt ttttcagggc gaagggaaag cctgacggat
     1981 acatcatgga aaccgaactg tttgtagatg cgaaccaaca attcattgaa cgcacgagcc
     2041 tcgctgacga tttgatcttc ggtacaaaaa atatgcgcat catcctgcac aaaaccgcga
     2101 accctcatca gaccgtgcag tgcgccgctc ggctcgttgc ggtggcaaga accgaattcc
     2161 gccaaacgca tcggcaaatc tcgatatgaa cgcaaaccgt tgttgaaaat ttgaacatga
     2221 cccggacagt tcatcggttt aaccgcatat tcgcgttttt ccgaactggt tacgaacata
     2281 ttgtctttgt agttgtccca gtggccggat ttttcccaaa aggttttatc cataatttga
     2341 ggcgttttga cctctttata accggcggcg ttcagctctt tacgcatatg ctgctcgata
     2401 gtctgccaca aagcccaacc tttgggatgc caaaacacca tacccggcgc ttcgtcctgc
     2461 aagtggaaca aatccagttg cttgcccaat ttgcggtggt cacgtttttc tgcttcttca
     2521 atgcgttgga tatagtcttt taattcgtct ttcgtcgccc aagcagtgcc ataaatacgt
     2581 tgcagcattt cattattgct gtcgccgcgc caatatgcgc ctgccagctt ggtcagcttg
     2641 aagtttttca ggaagcgggt gttcggaacg tgcggaccgc ggcacatatc gacatattcc
     2701 tgatgatgat acatacccat tgcttcaact tcgggcatat cttcaatcag gcgcagtttg
     2761 tattcttcgc cgcgctcttg aaaaatttta atcgcctccg cacgcggagt catgattttg
     2821 accacatcat aatcttgggc aatcaattct ttcatacgcg cttcaatggc ggcaacatct
     2881 tccggtgtaa acggtttttc cgtggcgatg tcgtaataaa agccctcttc aatgacgggg
     2941 ccgataacca tttttgcatt aggatagagt tgcttgacgg catgcccgac aagatgtgcg
     3001 caggaatggc ggatgatttc gatgccttcc tgatctttcg gagtaatgat ttgaacagca
     3061 gaatcctcaa caatcgggtc gcacgcatcg accaatttgc cgtttacctt gcctgccacc
     3121 gccgccttcg ccaaaccggc accgatagac gcagcaattt gagccacggt aacgggggat
     3181 tcgtattggc ggactgaaca gtccggcaag gtaatattca acatcaaacg ctccgaaaga
     3241 ttaaaaaata acggcataaa tgccgttatg ggaatttggt aggcacgatt ggattcgaac
     3301 caacgacccc caccatgtca aggtggtgct ctaaccaact gagctacgtg ccttcaaaga
     3361 atttttgtat tttatcgggt cgttttaatt tttgcaagag agatgtgcat ttctttatgc
     3421 aacattgtgg caagatttgg ggataccgtc tgaaaaaccg tgggaattca tttataatgc
     3481 cgtcttttaa aatatatttc gacccctgtc gcccaactta cattcaatct tatgcttaaa
     3541 tttactttac acaaaaaaga cggtctcgcc cgacgcggca cgctggagtt gaaccacgga
     3601 aaaatcgaaa cgccggtttt catgccggtc ggtacttacg gttcggtcaa agcgatgaac
     3661 ccgcaaaacc tgcacgacat caaggcgcaa attattttgg gcaacactta tcatttgtgg
     3721 ctgcgtccgg gtttggaggt cgtcgaacag tttggagggc ttcacggttt tatcggctgg
     3781 gacaaaccga ttctgaccga ctcgggcggt tttcaggttt tttctttgtc ggatatgcgc
     3841 aagctgaccg aagaaggctg tacgtttaaa agcccgatta acggcgacaa gctgttttta
     3901 tcacctgaaa tttccatgaa aatccaaacg gttttgaact cggatatcgc gatgcagttg
     3961 gacgaatgca cgccgggcga aacaacgcgc gaacaggcgc gaaaatccct gcaaatgagc
     4021 ttgcgctggg cggaacggag caaaaaagcc tttgaagatt tgaaaaaccc gaacgcgctg
     4081 ttcggcatcg tgcaaggcgc gatgtatgag gatttgcgcg aagaatcttt gcgcggtttg
     4141 gaggaatttg attttcccgg ccttgccgtc ggcggtttgt ccgtcggcga acccaagccc
     4201 gaaatgtacc gtatgctgca cgccgtcggc ccgattttgc cggaacacaa gccgcattac
     4261 ctgatgggcg taggcacgcc ggaagacctc gtgtacggcg tggcgcacgg tatcgatatg
     4321 ttcgactgcg tgatgcccac ccgcaatgcg cgcaacggct ggctgtttac ccgtttcggc
     4381 gatttgaaaa tcaaaaacgc caaacacaag ctcgacaagc gtccgataga cgaaagctgc
     4441 acctgctacg cctgccaaaa tttcagccgc gcctacctgc accatctgca ccgcgccggc
     4501 gaaatcttgg gcgcgcaatt gaacaccatc cacaacctgc atttctacca agtcattatg
     4561 gcggaaatgc gcgaagccgt cgaacaaggc aaatttgccg actggcaggc gcaattccac
     4621 gaaaaccgtg cgcgcggcgt ggactgattc ccggcaatgc cgtctgaagc cgcttcagac
     4681 ggcattttgc cgccttaccc tacctgcact atttttcaga aaccgatcat gcttccattc
     4741 cttccagaac cctccctttc ctatacgcaa caaaaccgta ccgccgtttt gctgttgaac
     4801 ctcggcacac ccgacgcacc gaccgcacag gcggtacgcc cttatctgaa atcctttctg
     4861 accgaccggc gcatcgtcga actgcccaaa tggctgtggt atcccattct gcatggcctg
     4921 gtactgacgt tccgccccaa aaaaagcgcg cacgcctatg aaaaaatctg gtttaaggaa
     4981 ggttcgcccc tagaagttta cacagcacgc caagctgccg cgcttgccga acgtatgccc
     5041 gacctcatcg tccgccacgc catgacttac ggcaatcctt cgatagcgga tgtattggcg
     5101 gagctgaaat cccaaggtgt aggcagattg cttgcgattc ccctgtatcc gcaatatgcc
     5161 gcttccagca gcggagcggc ggtagataaa gtgtgcgaac aactgctgct gcaacgcaac
     5221 caaatgagcg tccgcaccat ttcgcgcttt tatgatgatg ccggctacat tgatgcgatg
     5281 aaaaaccaca tcctccgata ttgggcggaa cacgggcgtg ggaaaaaact gatgttgagt
     5341 tttcacggcg taccgcagaa gcactacgac ctcggcgacc cctatcccga cgagtgccgc
     5401 cacaccgcca aactgcttgc cgaagcactg gaactgaccg aagacgaata taccgtatcg
     5461 ttccaaagcc aattcggcag ggcaaaatgg gttacaccga gcacgcagga tttgttcggc
     5521 aaactgccca aacagggggt aaccgagctg gacgtattct gcccgggctt tttggcagac
     5581 tgcttggaaa ccatggaaga aatcgccctg atggggcggg aacagtttta tgaagcgggc
     5641 ggaaaaaact accgctacat cccctgcctc aacgacaacc ccgactggat agacgcactc
     5701 gtcgcacttg ccgaagaaaa ccttggcggc tggcgttgaa actgtttgag ccatgtctaa
     5761 aatgccgtct gaacgccgtg ttcagacggc attttcccgc tactttagcg tatgatggca
     5821 tctatgccgg acagcacatc aagtgcaacc ttactaccga ttcggcaaaa aaacctttca
     5881 cccgctacgc aaaatcaaca acaaggtttc aaacattaag gaaacgccaa tgaacacaac
     5941 ccgactgccg accgccttca tcttgtgctg cctctgcgcc gccgcttctg ccgccgacaa
     6001 cagcatcatg acaaaagggc aaaaagtgta cgaatccaac tgcatcgcct gccacggcaa
     6061 gaaaggggaa gggcgcggca ctgcgtttcc tccgcttttc cggtcggact atattatgaa
     6121 caaaccgcac gtcctgctgc acagcatggt caaaggcatc aacggtacaa tcaaagtcaa
     6181 cggcaaaacc tacaacggat tcatgcccgc aaccgccatc agcgatgcgg acattgccgc
     6241 cgtcgccact tatatcatga acgcctttga caacggcggc ggaagcgtta ccgaaaaaga
     6301 cgtaaaacag gcaaaaggca aaaaaaacca aacagacaaa atgccgtccg aaaccggcaa
     6361 tccggcttca gacggcattc aaaccaaacc tttctaacgc ggtactttca gccccataga
     6421 cccgatattg ccgccaccgt caacctcctt cgcggtcagc ataaagccgc cgatgtcaat
     6481 acggtcgccc tcgaccggct cctgactgtc ggaacgctta tcgaaaagct cggcaaggct
     6541 caaaccctct tcgcccgctt ccagcttcaa accgtaagca agtgccaaat cgcccgaacg
     6601 tgctgccggc gaaacgacaa actcaccgaa gaaatcaaaa ttttcacgga cgccgatacc
     6661 cgtctcggta aagtatttcg ccattttatc gaccttgccg tcggccagga tgtaccacgc
     6721 caaatcctcc gcctgaagca cggtgtcgga ctgcatttcg attcggctgc cgttgcgtat
     6781 caatgcgaaa cagcgtgcgt caaacgaatc ggaaatcggt tcgaccgtat cgggatggtg
     6841 tccctccgct tcagattcgg caaccacttt aaacgccgac attctgacaa tttccttttc
     6901 cgccagccaa atatcatgcg tatctttcgg ttcgggcttg ttgggcatgg caaccttcaa
     6961 cagccgcgcc atcacaggaa tcgtcgttcc ctgaatcagc agcgacagca ccaccacggc
     7021 aaacgccaca tcaaacagca ggtgcgaatt gggaacgccc atcaccagcg gcatcatcgc
     7081 cagcgaaatc ggtacggctc ctcgcaagcc caaccaactg atatacgcct tttcacgcag
     7141 gctgtaattg aatttccaca aaccgccgaa cactgccagc ggacgcgcga ccagcatcag
     7201 gaacgccgca atcgccaagg cttccgccgc cctgtccaac acgccggcgg gagaaaccag
     7261 cagaccgagc atgacgaaca aagttgcctg cgccagccaa gccaaaccgt ccatcacacg
     7321 caaaacgtgt tccgtcgcac ggttgcgctg gttaccgaca atgatgccgg caaggtaaac
     7381 cgccaaaaag ccgctgccgc ctatggtatt ggtaaacgca aacacaagca gcccgcccga
     7441 cacaatcatc agcgcgtaca gaccttccgc aagattcaga cggcgtacca gctttgccaa
     7501 tatctttccg cccgcccaac ccgtcagcag accgaaaccg atttgcagcg caagcatccg
     7561 gacaaacgct gccgcacccg attccgccgg ctgcataatc atggtaatca gtgccgtaac
     7621 caaaaaaacc gccatcgggt cgttcgcacc cgattcgatt tccaaagtcg cctgcacccg
     7681 ttcgttcaaa cgcacgccgc tgttgcgcaa aaggctgaat accgcgccgg catcggtcga
     7741 accgacaatc gccgccatca gcacgccgaa cttccaatcc aaaccgagat aaaaagttgc
     7801 aaacagtccc agcggaagca cggtggcaaa cacgccccac gaagcgagta ccgacgcggg
     7861 cttcaacgca atccgaaaac tggaaagctg cgtccgcaaa ccgccgtcga gcagaataac
     7921 cgccaaagca agctggctga tgaaattcgc catcacgaca ttattgaagg caatgccgcc
     7981 aacgccttcc tcgcccgcca gcatgccgac ggcaagaaac accagcagca aaggcattcc
     8041 caaacgtgcg gacaaagtgg tcgaaaccac gctcaggaac aacagtgcgc cacccagcag
     8101 aaacaggctg ttcatccaat ccacgccaac ggctccccct taaaattcat gaaattagaa
     8161 tcgaaagatt gtaacacggc attttcttct cacgaaactt tatttcatgt ccgccaccgc
     8221 cttcagacgg cattttcctg tttcatgccg cctgataccg cccaaacccg cgttctccta
     8281 tataatgtcg gactttgcgc cgcatttcag gattttttat ggcatttgcc tcactattta
     8341 ctctgccgga ctacatcacc gccgttttgg acgatgttgc cctgatgacc aaagccgccg
     8401 caaagaaaac cgccggcgtg gccggcgacg atttggcacc caatgccaac cgggttacag
     8461 gcgtatcggc agaacgcgag ttgccgattg tttggccggt ggcgaaaggt tcttttgcca
     8521 acaagccggt tttggtgtct gcggctctgc tgctttccgc cttcctgccg caactcatta
     8581 cgccgctttt gacggcaggc gggatttatt tgtgctttga gggcgtggaa aagctgctgc
     8641 acaagtttct gcaccgacat gacgcgcacg atgacggcgg cgaaacggcg gttaacgagc
     8701 aggctaaaat caaaggtgca atccgtaccg actttatcct gtccgcagaa atcatcatca
     8761 tcgcgctgtg cgtggtcgaa caatacagcc tgatgacgcg ctcgctcgtg atggcggcaa
     8821 tcggcatcgg catgactgtt ttggtgtacg gaatcgtcgc cgtcatcgtc aaactcgacg
     8881 acttgggcat gctgctgatg cgccgcccac aacctcggcc ttttgcacga tttcctgcac
     8941 gcgcaacact ggaacgctgg ctggacagag tattccgcca acctcgttgt cgggccgctt
     9001 tccggttcga ttgcctgcgc cccgccttgt cgctgatgaa tcgtttcggc aggcattgat
     9061 tcctttttca aataccgatg ccgtctgaaa gacgttcaga cggcatattc cgaacagaca
     9121 gacgaatatg ttttccaaac tggacaaata ctggcagcac cccgccctct actggccttt
     9181 gctcatcctt tttgccgccg ccaccccctt cgccttcgca ccctactacc acttttggct
     9241 gatgcccttg attttcggcg ccttcgtccg cctcatcgaa ctgcgtccgc gttttgccgc
     9301 ctcttccgcc tacctgttcg gtctgaccgc atacacggca cagttctact ggatacacac
     9361 tgccctgcac gacgtttccg gcctgcccga cctctatgcc gtaccgctga ccttcctgct
     9421 gcccgcctac cttgcccttt atccggcact gtgtttctgg ctgtggaaaa aatttaccct
     9481 gccccagggc ataaagaccg gtctggtact gcccatcctg tggacgctga ccgagtttgc
     9541 ccgcgagcgt ttcctgaccg gattcggctg gggcgcaatc ggctactccc aaatcacccc
     9601 ggacagcccg ctggcgggtt tcgccccctt gggcggcatc cacatggtta cactggcaac
     9661 cgcctttctc ggtgtctggc tggttttggc gatcgacaac accgcacgtt cgggcaaacg
     9721 cctgcttccg gccattctga ttgccgccct gcttgccgca ggctacaccg cccaacaaac
     9781 cgacttcacc cgccccgacg gcagccgcag caccgtcgcc ctgcttcagg gcaacatcgc
     9841 ccaaaccctc aaatggcgtg aagaccaagt catcccgacc atacagaaat attacgaaca
     9901 ggtcggcaaa accactgccg acatcgtcat cctgcccgaa accgccattc ccatcatgcg
     9961 ccaaaacctg ccggaaaaca tactggcgca attcgccgaa caggcgcaaa acaacggcag
    10021 cgcgctcgcc gtcggcatca gccaatacac ttcggacggc aacggttacg aaaacgccgt
    10081 catcaacctg accggctatc aggaaaacaa tcaggacggc atcccttact acgccaaaaa
    10141 ccacctcgtc cccttcggcg aatacaaacc gctgcccctc ctgaccacac cgctttacaa
    10201 aatgatggac atgccccttt ccgacttccg caaaggcggc ggcaagcaat ccgccatgat
    10261 gatgaaaaac caaaaaatcg ccttcaacat ctgctacgaa gacggattcg gcgacgaact
    10321 gattgccgcc gccaaagacg ccacactgct tgccaatgtc agcaatatgg cgtggtatgg
    10381 aaaatccaac gccatgtacc agcacctcca acaatcgcag gcgcgggcta tggaactcgg
    10441 acgctatatg gtccgcgcca ccaacaccgg cgcaaccgcc atcatctccc ccaaaggcaa
    10501 catcatcgcc caagcccaac ccgatacgga aaccgtatta gaaggacaca tcaaaggcta
    10561 catcggcgaa acgccctata tgaaaaccgg cagttcatgg tggttgatgg gcatattgac
    10621 cctagccgca ctgattcttt tcatcttccg aaacaaagaa cactgatacc tgcacagtcc
    10681 gtccggacgg gctgtctttt ttcaaaccgg ccgtttacat acaaccacgt atgtaatata
    10741 attctaaaat cgaattgagc tatcaggttt acaaaatcaa tcaaacttgc cttacaaaat
    10801 tttcctgtct ttcaaacctt agcgtatatc tcctgccaaa catacaaaat acaagccaag
    10861 cagtgatata ctgcatccca acacaccaaa ccgccgatac gcagtttcag ccgaaaggaa
    10921 atgccccaaa tgaataacgc tttcgcatta cccgccatcc aaagcggcaa cggcagcctc
    10981 gaacaataca tccacaccgt caacagcatc ccgatgctgt cccaggaaga agaaacccgc
    11041 ctcgccgaac gccggataaa gggcgacctc aacgccgcca aacaactcat cctgtcccac
    11101 ctgcgcgtcg tcgtttccat cgcgcgcggc tatgacggct acgggctgaa tcaggccgac
    11161 ctgattcagg aaggaaatat cggtctgatg aaggcggtca aacgctacga gcccggtcga
    11221 ggtgcacgcc tgttttcatt tgccgtgcat tggattaaag cggaaattca cgaattcatc
    11281 ctgaggaact ggcgccttgt ccgcgttgcc accaccaaac cgcaacgcaa gctgtttttc
    11341 aacctgcgca gcatgcgtaa aaaccttaat gtcctgtctc ccaaagaggc acaagacatc
    11401 gccgacgatt tgggtgtcaa actttccgaa gttctggaaa tggaacagcg catgacggga
    11461 cacgacatcg ccatcatggc agacaacagc gacgacgagg acagtttcgc ccccatcgac
    11521 tggcttgccg accacgattc cgaaccgagc cgacaactat cgaaacaggc gcattacgcc
    11581 ctgcaaaccg aaggcctgca aaacgccttg gcgcaattgg acgacaggag ccgccgcatt
    11641 gtggaaagcc gctggcttca agacgacggc ggactgacgc tgcaccagct tgccgccgaa
    11701 tacggcgtat ctgccgagcg catccgccag attgaagcga aagccatgca gaaactgcgc
    11761 ggtttcctga ccgaagaagc cgaagcggtt tgaaatatac acaataaaat acccgacaaa
    11821 acaatttgtc gggtatttta tttggtaaac atcaatgcgg tttgtgcgtc gtgccgtaca
    11881 cgattttatc cgcccaagcc atcgcaatcg ccaaaatcaa aaagcagaca tgcaccagac
    11941 actgccacat cagctgcttt tccgacagat tggcggaatt gataaatgtt tggagcaaat
    12001 ggatggatga ataccgataa tcgacatcga cagccttacc ttcaataccg gtgcattcac
    12061 atggctcaac cactcgggcc ggtcaggatg gtcgtcgata cgcaaccggg atacgaacga
    12121 ctcatacccg ccaatctgca ccatggtcag caaattcgca atcataacca catcaatcag
    12181 atttaaaaca gcgagcatga tggcgttttc gtccgacaca tccaaattca tgaccagatg
    12241 cttcaacgat ttcaaaaact tataggcaca aatcgcccgt acaacagtca gccccgcata
    12301 aatcggcact tgcagccaac ggcttgcaaa aatcattttg gcaaaaaacc catagcctgt
    12361 tcgggttttg gagattttgc ttgatacatt tcccttcctt gcagcaacaa aagcgcgtga
    12421 ttccaatcta ccactgcgaa atcttcaatt tttcacaccc gaaaacgctt gccgccatac
    12481 agatgtgata tattgattcc attttaacga acttcggaga acgacatgag cagcggaaat
    12541 atccgcatcc acagcatgac cggctttgcc aacgcggcgg cagagtgcgg cagcaaacgc
    12601 atcaacctcg acatccgcgc cgtcaaccac cgctttttgg acattcaaat caggatgccc
    12661 gacgatttgc gccatttgga aaacggcatc cgcgagcaga tttcatccca tctggcgcgc
    12721 ggcaaagtcg aatgcaaaat ccaaattcaa gatgcggaaa acggcaatca gtctttggaa
    12781 ctgaatcgcg ttctggtcgg acagcttgcc gaaatcaaca aaaacctccg caaacattat
    12841 gatttggcaa aactgggcgt tgctgatatt ttgcgctttc cgggcgtatt ggcaagccaa
    12901 aaggaaaata cggaagcatt ggcgaaaacc attgtcgaac tggccgacaa agcactaaaa
    12961 gactttaccg ccgcacgtcg gcgtgaaggg aaaaaattgg gcgaacacct gttacaacgc
    13021 attaaaaaca tggaagaaat catcgatgct ttgagcgaaa tcttccccgc gctggtggaa
    13081 gcgcataaag aaaaaatccg cacccgcctt gccgaagccg tcggcagcat cgacaacgac
    13141 aggctgcaac aggaatttgc cctctttatc caaaaatccg acatcgacga agaattcagc
    13201 cgcctgcgca cccacattgc cgaagtgcgc cgtatcgtta ccgaacacaa aggcagcagc
    13261 ggcaaacggt tggacttcct gatgcaggaa ctgaaccgcg aagccaacac tttgggcagc
    13321 aaatccatcg ctaccgaatg cacccaagcc tcggtcgagc tgaaagtcct gatcgaacag
    13381 atgcgcgaac aggtgcagaa tatcgaataa ccctgccttt ctctccaaac atgacaatgc
    13441 cgtctgaaac ttttttcaga cggcattctt gatcggctga aaacctctgt tgcaagcaat
    13501 tcaagattgt tctttcacat ccaccaacct cgttccggca aggaagtcat acagaaactg
    13561 ccggtcggga ttcagcaggg cgaaccccca cggcaaaatc agccaaacca atgccgcgcc
    13621 ggccgcgccc ttgggcggaa tgccgaggaa gtggcgcaat ccggcataag caagcatagg
    13681 aatgaagacg atgaatatgc acgcccaaat aaagcgcagg cgcagcaggt gcaaagacgg
    13741 ctgtatgccg ttaaggtcgc acaagccgat tttccatgtc ctcatcgcca aggtctgccc
    13801 ctgaccgtgc cagttggcgc ggaaataaag ccaccatgct cccattatca ggatactcgt
    13861 taccaatgca gaaaccgcga tagaaacggg attcagaaaa atggcggcaa taccggcaag
    13921 caatgctgcc aaacaggtcg ccgcaccgac cagcagcatc tcatacagta tggcggcaaa
    13981 gcggcgtttg agcggggcgg ttttcagtat catcatcttt tcaatcggaa tatgccgtct
    14041 gaaacgccaa cagacttcag acggcatttg tgcaaagatg ccttgcggcg gttaacggtg
    14101 cggacgtttc tgaccgcgcg actgttttgc cgccatttga ttgatttcct gacgtgtcgg
    14161 gcgttttttg aacatagcgt gcgcctcgtc caccgaacat ttttgcgaca ggcagatcag
    14221 ggtaatcgca tctttctggt gttgtccgcc gctgtggtac atacggcgca ggtttgcctc
    14281 gttgattctg cctttttcgg gatcgatgtc gaattttttc agacgttcga taaactggcg
    14341 ttgctgtcgg cgggatgtcc aaacaaagcc gcccgcagcg gcggcgacga tgacggcggc
    14401 aagcaggatg gcaagcggcc aggaatcgac aatcaatacg ataatgaggc ttaaaacggc
    14461 ggtggtcagt aaaatcaggc cgcccaagcg cagtttggtc ttattgtcca tagggttgat
    14521 gttcctttat tgaggtggtc gtgccgtctg aaatgttttc ggacggattg gtgaatactt
    14581 ttcaggatta acggtatttt acagtatttt cggattttgg ggattaccgc tttattccgc
    14641 cagcgacacg acaagctgtt tgaataccgt ccatgcgtcg ccgtcttccg cgcctttgat
    14701 gattcggtcg atttgggcgc aggttttgag cgcgtcaagc aggcggacga cggaaatccg
    14761 cttgaccgca agcggtgcga gcgtctgttt gtcgccccaa agcctgaggc tgttgcggac
    14821 ggattggatg ctctgcccct gtttcagggc agcggcaagc cgaatcagcg tccgcacgtc
    14881 ttcggcaacc gcccacagaa gcagcaccgg ttcttcgcct tcttcctcca acccgtccaa
    14941 cagcctgcat acgcgcggga catcgccctt catccacgcg cctgccagtt ggaacgcgtc
    15001 gaagcgggca acattggcaa cggcggtttg cgcctcatcg atattgacgg catgcccttt
    15061 cggatacagc agcgcgagct tgtcgatttc ctgacgtgcc gccaacagat tgccttccac
    15121 gcgctcggca aacagtgcca atgcgtctgc ctcgataccc aaaccgattt tgtccagccg
    15181 tccgcgtatc cattggggca aagccgccgc accgaccggt ttggcttccc acacttcccc
    15241 ctttgccgcc aatgcggcaa accatttgga ctggagccgg gttttctcca gtttgggcag
    15301 caaaaccagc gttaccgtat cttccggcag tcgggcggca aaatcctgca atgcctcgcc
    15361 gccgtttttg ccgggttttc cgttggggat atgcaattcc aacagtttca aatcggcaaa
    15421 cagacccgca ttgcctgcgg tttgcagcag ttcgttccaa tcgaaagacg cgtcggcggt
    15481 ataggcttcg cggttgagat aaccctgctt cttcgccgcc gccctcaatg cgtccactgc
    15541 ctcgatacgc agcagttctt cctcgccgtg gatgacgtac agaggtttca aaggcgcgtc
    15601 cgtatcgatg cgtccgatat gtgccgccac gtcattccgc cttcagaaag gtcaggcggc
    15661 ggacaatctg ttcggcaaca tcctgccgca tttccgccca cagggtttct tcttcttcct
    15721 gtttgcccaa aatttcgttg tcggcataat ccaaaatgcg gcggacggac acggtcatcg
    15781 gtttgccgac cggctcgccg cgtttcaata cctgcgcttc aaccgtcaat atcaaaagat
    15841 attcgttgat gactgccgca cgggtaacgg tataggtttc cttgttttgg gaaacgctgt
    15901 ctatacgcag ggtcatctgc gcgccggcag catcgtccac cctgcccgaa gcctgataca
    15961 gcgcggtttc caaaggaaac tgcaatgcct gtccgccttc gatgtgccag ctccggtagg
    16021 tcagcggcgg agaaatgccg tctgcacctt tcaggtggaa accgcacgcg cccagcacca
    16081 aggctgcggc agtaaggaat attttgttca tcgcttgcct ttctcaaaaa cataaagtcg
    16141 gtagattata tcagcggcgt gttcagacgg cattgccgtc cagccaaatc aggctcgcca
    16201 tacgccccgt cgctccgtcg cggcggtagg aaaagaaaat atcccgttcc aaaaccgtac
    16261 aatgcgtgcc gccgtacacg ccgcccacgc cttcgcgcct cagaatcagg cgggcgagcg
    16321 cgtagaggtc ggcaaggaat ttgccgccgc cgatgggttc aaatgcagca gcggcttcgg
    16381 gcatggacgt gcagaacgca tcaaacacgt cctgcccgac ttcaaacgca tccgcactga
    16441 tggcagggcc gagatacgcc ataatttcga caggcggaac cttcatcgcg gcaatggtgt
    16501 tttgcaatac gccgcccgcc aaaccgctcc agcccgcgtg tgcggcggca accgccgtac
    16561 ctgccctgtc gcaaaataga acgggcagac agtctgcagt catcacggca cagacggctt
    16621 tacccgtgtc gtccacggaa gcgtcggcat cgggcgtgcc gtccaatgct tcggcagcat
    16681 tgacgacaat ggtgctgtgg atttgattga gataggcaac gggcaatccg acctgctgtt
    16741 gcacgatttc gcggttgcgg cgcacggttt cagggtcgtc gccgacgtgc gtaccgaggt
    16801 tcaaactctg atacgcacct tggctcacgc cgccgttgcg cgtggtaatc agggttttca
    16861 cattggcggg cgcgggccaa tcggcggtca ggaagttttt gcctttcggg gcgagattta
    16921 gggtttctgt gatggttttc attggatatt ggaataggtg tgcggcggaa agggttgatt
    16981 aactgccttc ggggcaaatg gatgcttgtt ttttcgtcat tcccgcacag gcgggaattc
    17041 ggagattcgg gattgttttc aaacgttcgg gtcggattct tgccggtgcg ggaatgatgc
    17101 ccttatatac tttctccgag ctttatatgc ttcaacaggg gacggcacat caagcaccgc
    17161 actgcgtgtt gcccgaacga ggctgccctc cgattagatt ctatcgctat aaacagacgg
    17221 gtttcaaccg aaaaggaatg gggataaagt ccatttccga cacctctcgg gctataccgt
    17281 ctgaaaacca atctccactt tcagacggca ttgtttaggc gcggtcattt tgcaaattaa
    17341 ggttaaggcg tgtatgcttg ccttcactta aaaacaaaca cgcaacgcat tattatgaat
    17401 atcctcagta aaatcagcag ctttatcgga aaaacatttt ccctctgaac ctcgctcttt
    17461 gccgccgccg cttttttcgc gcccgacacc ttcaaatggg cggggcctta tattccttgg
    17521 ctgttgggca ttattatgtt cggtatgggt ttgacgctca aaccttccga cttcgatatt
    17581 ttgttcaaac atcccaaagc cgtcatcatc ggcgtaatcg cacaattcgc cattatgccg
    17641 gcaaccgcct ggctgccgtc caaactgttg aacctgcctg ccgaaatcgc ggtcggcgtg
    17701 attttggtcg gctgctgccc gggcggtacg gcttccaatg tgatgaccta tctggcgcgc
    17761 ggcaatgtgg ctttgtcggt tgccgttacg tctgtttcca ccctgatttc cccattgctg
    17821 actcccgcca tcttcctgat gcttgccggt gaaatgctgg aaatccaagc ggccggtatg
    17881 ttgatgtcca tcgtcaaaat ggttttgctc cccattgttt tgggtttgat tgtccataag
    17941 gttttgggca gtaaaaccga aaagccgacc gatgcgctgc cgctggtttc cgttgccgcc
    18001 atcgtgctga ttatcggcgc ggtagtcggg gcaagcaaag gcaagattat ggaaagcggc
    18061 ctgctgattt ttgcggttgt cgcactccgc aacggcatcg gctacctgct cggcttcttt
    18121 gccgccaaat ggaccggcct gccttatgat gcacaaaaaa cgctggccat cgaagtcggt
    18181 atgcaaaact cgggcctggc cgccgcgctt gccgccgcac actttgccgc cgcgccggtc
    18241 gttgccgttc cgggcgcatt gttcagcgtg tggcacaata tctccggctc gctgctggca
    18301 acttattggg cggccaaagc cggtaaacat aaaaaaccct aaacgccttt catcataatg
    18361 ccgtctgaac ggggcaaccg aaaccggcgg tttctgcccg gccccttcag acggcctttg
    18421 tttgaaatcg gcggggacga ttgcccggct gctccggttc ggctgcctgc gttcgccccg
    18481 cctttcaagc cgcctcactc ccttacataa accacttcga catcgtagtc gtcttcgttc
    18541 caatcgtcat cgtcgtccgc gccgaatttg tcctgccatt cctcttcatt gctcaaagac
    18601 gaatccaaac cggcttcaag acggaggacg gacaacaaat gatatatgtc gtccggaatc
    18661 ggtgcctcaa acgaaacggt ttcgccgctt tccggatggg taaaactcaa gcggtaggcg
    18721 tgcaacgcct gacgcgcgcc caaactttta acggcttctt tcaccgtgtc gccgcacgga
    18781 tggcgcgggt tgccgtaaac cgggtcgccg gcaagcggat ggttggcctc gcgcatatgg
    18841 acgcggattt ggtgcgtcct gcccgttccg agcgagcatt cgatgtagct gtgggcaaga
    18901 tagcgttcca acactttgac gtgggttacg gcaggcttgc cgccgaattt gacggctgcc
    18961 attttcaggc ggttgtgcgg atcgcgtccg atttgggttt cgattttacc gtcgaagggg
    19021 acgatgccgt tggcgacggc gcggtagatg cgtttgaccg tgcgttcttg aagctgcctc
    19081 acgagggaat tttgcgccgg cagggttttg gcaaccacca tcagcccgct ggtttctttg
    19141 tccaaacggt gtacgatgcc cgcgcgcgga atttgggaca gctcggggca atgcgccaac
    19201 aggccgttga gcagcgtccc cgtccagttg cccgccgccg gatgcaccac cagtccggcc
    19261 ggtttgttga cgacgatgac ggtatcgtct tcgtaaacaa tatccaaatc cataggctcc
    19321 ggaacaaacg ccagattttc ctcactcgga cggacggtta cacaaatttg ctcgccgcct
    19381 atcattttgt ctttgggttg cgaaggttta tcgtttacaa taaccgcgcc ttctttaatc
    19441 catgatgtca ggcggctgcg cgaatagtcg ggcagaagtt tcgccaacac cgcatccaac
    19501 cgcccgccgg caagctcggg cggaacggtc agaccgatac ggttttcagt tccggaagct
    19561 gacgcaaagt ctgaatcgtc gctataatcg gattcattat caaaggaagt attctgcatg
    19621 aaaaaaattc ttttaacggt ttcattaggt ttggcactga gtgcctgtgc cactcaaggt
    19681 acggccgaca aagatgccca gattacccaa gattggagtg tggagaagct ctatgccgaa
    19741 gcccaggacg aattgaacag cagcaattat acgcgggctg tcaagttata cgaaatcttg
    19801 gaatcgcgct tccccaccag ccgccatgcc cggcaatccc aactggatac cgcatacgcc
    19861 tattataaag acgatgaaaa agacaaggct ctggcggcaa tcgaacgctt ccgccgcctc
    19921 catccgcagc atccgaacat ggattacgcg ctgtacctgc gcggcttggt gctgtttaac
    19981 gaagatcagt ccttcctgaa caaactggcc tcgcaagact ggtccgaccg cgacccgaaa
    20041 gccaaccgcg aagcgtacca ggcgtttgcg gaactcgtcc aacgcttccc gaacagcaaa
    20101 tacgccgccg atgcaaccgc acgcatggtc aaactggtcg atgctttggg cggcaatgaa
    20161 atgtcggtgg cgcgttacta catgaaacgc ggcgcatata tcgccgccgc caaccgcgcc
    20221 aaaaaaatta tcggcagcta tcaaaataca cgctatgtcg aagaatcact ggccatattg
    20281 gaacttgcct acaagaagtt ggacaagccc cagcttgccg ccgatacgcg ccgcgtattg
    20341 gaaaccaact tcccgaaaag cccgtttttg acgcacgctt ggcagcccga cgatatgccc
    20401 tggtggcgtt actggcatta agcccatcct cgaaatgccg tctgaagccc tttcagacgg
    20461 cattttccgt tccggcacca gccttcccgt tcactcaaac ggttttttct gccaatagaa
    20521 tttatacact ctcaaacgtt gagcctttac gcctccgcgt cccaagccga attgcagcgc
    20581 gcccgacaaa tccgtccgca acaacttgat gccgtgtgcg cggacacggt tctgcaccgc
    20641 ttcggtcgga tgcttgtagg cgttggcata accgcttgaa gcaacggcat attcgggcga
    20701 aacggcattg aggaacacgc ccgacgagga cgtattgctg ccgtgatgcc ccaacaccaa
    20761 cacctggctg tacaggttgc ctccatactt gccgaccagg ctttcctcgc ccttcgtatc
    20821 caaatcgccc gttaccagca gtgccgcacc gcccgccaca acacgcaaaa cacaactttt
    20881 cccattatca tcgatatttt tgcgttcaga cggcctcaaa aactcgaaat ccacgccgtc
    20941 ccattgccaa cgctgttccg cacaatgccg cgccccctca taaaattccg gctgtccggc
    21001 ataaatcccg ccgttcggta tcttgccgac tgcctgaaag ccgccgtcgt ggtcgctgtc
    21061 gtgatgcgac agaaccagct tgtccaaacg gcggacaccc gccgcattca aactcggcac
    21121 gatacccgtt tgtgccgccg ctaccgttcc cgtatcgaaa agcagatggc ggtttgccgt
    21181 ccgcacaagc accgacaagc cctgccccgc atcccaaacc gtaaccgcag cttcgttttc
    21241 aggtactgct tcaggacggt aggatacaaa ccctgccaac agcaacaccg cccacggacg
    21301 caaacccaag ccgcgcggca gcagcaacag caaagcggca cacaccgcca acaccagcag
    21361 cggcaaaggt gcggcggcaa cggcaaactc aggcgacaca tcggcaagcc acaccaaaaa
    21421 ccgcaaagtg tattccgcca aaaatgcccc cgcctgctga agcggcgcaa acggcacgac
    21481 cgaacccagc aacgccagcg gggtcaacac ccaagaaaac cacggtatcg acaccgcatt
    21541 gaccaaaggg ctgaccaaag gcagcgaggc aaacagataa ccgagcaaaa ccagagacaa
    21601 caccgaagcc gcccactgcc cgcgcacggc ggtttgccgt ttcccctcgt acaaacgccc
    21661 tgcacacgcc catatcaggg ccgccaccaa accgaaagac agccaagtac cgacacccaa
    21721 aaccgccaaa gggtcgaaca gcagcaccgc cgccaacgcc tgccaccacg tcgcccacgc
    21781 cgacagtctt cccctgcgcc acgcccacgc gaacgccgcc aacatcaaaa cactgcgctg
    21841 cgtcggcacg gaaaaaccgg caagcagcgc gtaaaacagc gcgcccgcac accccgccgc
    21901 caaaacccac gcgcgcggcc gggcgggaag gcgcggggaa caggcaagca gccgcttcgc
    21961 cagccacgca aacagcaccg ccaccatcgt aacgtgcaaa cccgagatac tgaccaaatg
    22021 cgtcagcccc aacggccgga acgcctgcca caatccgggg cgcaatgccg actgttcgcc
    22081 cacgctcaac gcgcgcatca gcccgatgcc gtctgaaagc ccgccgtccg catccgcctg
    22141 ccgccaattg cggctgatgc ggctgcgcca aaccgcaatc ccccaaccgc ttccgccatg
    22201 cagcaaaacc ctgtccgcac cgaccgtccc cacgccgcct accccgttgg ataatgccca
    22261 cgcctcacgg ttcaaaccgc gcaggttcaa ctccccgacg acggggtgca cgcgtgccgt
    22321 tatccgccat ctgctcccga ccgcccattc gcgccgtttg tagtccgaca gcagcaaatc
    22381 aaacgtccga ccgccgctgt ccacagcctt tgccgcaaac tgcacgcgcc gcccgtccga
    22441 cctcggcata tccgtcactt ccaccgtcaa aggcacgcct gaaaccgcct ccgcccgcca
    22501 ttgcgaagac agtgccgctt ccgttctgaa tacgccgtaa gccgcgcccg ccaacacgca
    22561 cagcatcaga ccggcaaacg caaaacgcct tgcaagcaca gccaaaaccg caaaagccgc
    22621 caaccaaaac ggccaatgcg gtacaaccga cagtgcgaac gaaactgcca cgccgacaac
    22681 ccaacacggc aaaaaccaac gacggaacac gtctccccac tcccgatata aaaaacaaac
    22741 gatgataaag caaagccata aaaccgtcat aacaagattt gaaaatgata agaatgcaaa
    22801 cgaaaagcct cagtattatc cgagacaacg gcaaactttc catcgtcatt cccgcaaaag
    22861 cgggaatcca aagacaaaaa gccgcagaaa tttatcggaa agaaccgaac cacaaaaacc
    22921 ggcttcccat cttcgcttga ataacagaac aaagaaagcg gaaataaaaa catcaggatt
    22981 cttttttaaa ttggcaataa aacaccaaaa tgaatgagtt acacaaaaaa atactcaaca
    23041 ccacccaacc ggcgtaaaat gcaaaacatt atcgctatta aaacggtaaa accttatgaa
    23101 agccaaacgt tttaaaatta acgccatatc cttatccatc tttcttgcct atgcccttac
    23161 gccatactca gaagcggcat tggtgagaga cgatgtcgat tatcaaatat tccgtgactt
    23221 tgcagaaaac aaaggcaaat tttttgtcgg cgcaaccgat ttatcagtga aaaacaaaca
    23281 aggtcaaaac atcggcaacg cgttatccaa cgtaccgatg attgatttta gcgttgcaga
    23341 tgtcaacaaa cgcatagcaa cggtagtcga tccccaatat gccgtcagcg tcaaacacgc
    23401 caaagcagaa gtccatactt tttattacgg ccaatacaac ggtcataatg atgtagccga
    23461 caaagaaaat gaataccgcg ttgtcgaaca aaataactat gaaccccata aagcttggag
    23521 tgcgagcaac ttaggccgcc tcgaagatta taatatggcg cgttttaata agtttgtaac
    23581 cgaagttgcg ccgattgcac caactgatgc cggcggcgga ttgaatacct acaaagataa
    23641 aaaccgtttt tcctcttttg tcagaatcgg tgcgggcagg caattagttt atgaaaaagg
    23701 ggtttatcat caagaaggaa atgaaaaagg ctacgatttg cgcgatcttt cacaagccta
    23761 tcgttatgcc attgcaggta cgccttataa agatattaat attgaccaaa caatgaatac
    23821 cgaaggtttg atcggctttg gtaatcataa taaacagtat tcggcagaag aacttaaaca
    23881 agcactttcg caagatgcgt taacaaatta cggcgtgttg ggcgatagcg gctctccgtt
    23941 atttgctttt gacaaacaaa aaaatcaatg ggtctttttg ggaacttacg attattgggc
    24001 aggttacgga aaaaaatcat ggcaagaatg gaatatctat aaaaaagaat ttgcagataa
    24061 aatcaaacaa cacgataacg ccggcaccgt caaaggtaat ggagaacatc attggaaaac
    24121 cacgggtaca aacagccata tcggttcgac agcggtaagg cttgccaaca atgaaggaga
    24181 tgcgaacaac ggacaaaatg ttacctttga agacaacggc actttggtat tgaatcaaaa
    24241 catcaaccaa ggcgcgggcg gcctgttttt caaaggcgat tacacagtca aaggtgcaaa
    24301 taatgacatc acttggttag gtgcggggat tgatgttgcc gacggcaaaa aagtcgtttg
    24361 gcaagtcaaa aatccgaatg gcgacagatt ggcaaaaatc ggcaaaggca ctttggaaat
    24421 aaacggcaca ggcgttaacc aagggcaatt aaaggtcggc gacggtacgg ttattctgaa
    24481 tcaaaaagcc gatgccgaca aaaaagttca ggctttctcc caagtcggca ttgtcagcgg
    24541 acgcggtaca ttggtattaa atagttcaaa tcagattaat cccgataacc tatatttcgg
    24601 tttccgtggc ggtcgtttgg atgccaatgg caatgacttg acttttgaac acatccgcaa
    24661 cgtggatgaa ggcgcgcgca ttgtcaacca caacacaggc cacgcctcca caatcacact
    24721 aacgggtaaa tctttaatta ccaatccgaa cagcctttcg gtacatagca tacaaaatga
    24781 ctatgatgaa gatgattata gttattatta ccgaccaagg cgacccatcc cacaaggcaa
    24841 agatctttat tacaaaaact atcgttatta cgccctaaaa tccggcggca acgtgaacgc
    24901 accgatgccc gagaacggtg tagcagaaaa taacgactgg gtctttatgg gatatacgca
    24961 agaagaagcc aagaaaaacg cgatgaacca caaaaacaat cagcgtatta gcggttttag
    25021 cggtttcttt ggcgaagaaa acgaaaaagg acataacggg gcattaaacc ttaatttcaa
    25081 tggcaaaagc gcgcaaaacc gtttcttgtt aacaggcggc gcgaatttaa acggaaaaat
    25141 aagcgtaact caaggcaatg tcttgttatc aggtcgtcca acaccacacg caagagattt
    25201 tgtgaacaaa tcttcagccc gaaaagacgc acatttctcc aaaaacaatg aagtcgtatt
    25261 tgaagacgac tggataaacc gcacattcaa agccgcagaa attgcggtta accaatccgc
    25321 atcattctct tccggaagaa atgtatccga catcaccgcc aacatcaccg caacagacaa
    25381 cgccaaagta aatttgggtt acaaaaacgg cgatgaggtt tgcgtgcgct cggactatac
    25441 cggttacgtt acctgcaaca caggcaactt atccgataag gctttaaaca gctttgatgc
    25501 gacacggatt aacggcaatg tgaatttgaa tcagaatgcg gcattggtct tgggcaaggc
    25561 tgcattatgg gggaaaattc aagggcaagg aaacagccgt gtcagcctaa accaacatag
    25621 caaatggcat ttgaccggcg acagccaagt acacaatctg tcattggcgg atagccatat
    25681 tcatttgaac aacgcttccg atgcgcaaag tgcaaataaa taccacacga tcaaaatcaa
    25741 tcatttatcc ggtaacgggc attttcatta tctgacggac ttggcgaaaa atcttgggga
    25801 taaagtgctt gtgaaggaat ccgcatccgg ccattatcag ctccatgttc aaaataaaac
    25861 aggcgaacct aatcaggaag ggctggatct ctttgatgca tcatccgtac aagaccgctc
    25921 ccgccttttt gtttccttgg caaatcatta cgtcgattta ggcgcattgc gttatacaat
    25981 caaaacagaa aacggtatta cccggttgta caatccttat gccgggaacc gccgcccagt
    26041 caagccggcc ccgtctcctg ccgcaaacac ggcttctcaa gcacaaaagg caacacaaac
    26101 ggacggtgca caaattgcca agcctcaaaa tatcgtcgtc gcaccgccta gcccgcaggc
    26161 aaatcaagcc gaagaagccc tccgccaaca agcaaaagcg gagcaagtga agcgtcagca
    26221 agcagcagaa gcagaaaaag ttgcacgtca aaaagacgaa gaggcaaaac gcaaagcagc
    26281 cgaaattgct cgtcagcagg aagaagcacg aaaagctgca gagttagccg ccaaacaaaa
    26341 ggcggaagca gagcgtaaag ccagagagtt ggcaagacaa aaagcagaag aggcaagtca
    26401 tcaagctaat gccaaaccaa aacgtcgtag acgtcgggct atattaccta gacctcctgc
    26461 gccagtattt tcattggatg attatgatgc aaaagacaat agtgaatcat caataggtaa
    26521 tttagctcgt gtaataccta gaatgggaag ggagttaatt aatgattatg aagaaatccc
    26581 cttggaggag ttggaagatg aagcggaaga agaacgtcgc caagcaacgc aattccaacc
    26641 caaaagtcgt aaccgtagag ctatatcatc ggaaccatca tctgatgaag atgcatctga
    26701 atcggtttcc acatcagaca aacaccctca agataatacg gaacttcatg aaaaagttga
    26761 gacggcgggt ttacaaccaa gagccgcgca gccgcgaacc caagccgccg cgcaagccga
    26821 tgcagtcagc accaatacta actcggcttt atctgacgca atggcaagca cgcaatctat
    26881 cttgttggat acaggtgctt cattaacacg gcacattgca caaaaatcac gcgctgatgc
    26941 cgaaaaaaac agtgtttgga tgtcaaacac cggttatggc cgtgattatg cttccgcaca
    27001 atatcgccgg tttagttcga aacgcacgca aacacaaatc ggcattgacc gcagcttgtc
    27061 cgaaaatatg cagataggcg gagtattgac ttactctgac agtcagcata cttttgatca
    27121 ggcgggcggc aaaaatactt ttgtgcaagc caacctttat ggtaagtatt atttaaatga
    27181 tgcttggtat gtggccggcg atattggtgc gggcagcttg agaagccggt tacaaacgca
    27241 gcaaaaagca aactttaacc gaacaagcat ccaaaccggc cttactttgg gcaatacgct
    27301 gaaaatcaat caattcgaga ttgtccccag tgcgggtatc cgttacagcc gcctgtcatc
    27361 tgcagattac aagttgggtg acgacagtgt taaagtaagt tctatggcag tgaaaacact
    27421 aacggccgga ctggattttg cttatcggtt taaagtcggc aaccttaccg taaaaccctt
    27481 gttatctgca gcttactttg ccaattatgg caaaggcggc gtgaatgtgg gcggtaaatc
    27541 cttcgcctat aaagcagata atcaacagca atattcagca ggcgccgcgt tactgtaccg
    27601 taatgttaca ttaaacgtaa atggcagtat tacaaaagga aaacaattgg aaaaacaaaa
    27661 atccggacaa attaaaatac agattcgttt ctaaaatact aaattcatag caaaataaaa
    27721 tgccgtctga actcaagctt cggacggcat ttttatcaga ctaacaaagc tacagctcaa
    27781 tgcctttgag tttcgccacg gtattgatgt ctttgtcgcc gcgacccgac aggttgacca
    27841 aaatcacttg gtctttaccc attttcggcg cgtttttcac cgcccaagca acggcgtggc
    27901 tggattcgag cgcggggatg atgccctcga atcggcagag caagtcaaag gcttcgagtg
    27961 cttcgtcatc tttggcaacg gtgtattcga cgcgcttgat gtcgtgcaga tggctgtgtt
    28021 ccgggccgat gccggggtaa tccaagcctg cggaaacaga gtgcgtcccc aagacttggc
    28081 cgttttcgtc ctgcatcaga tagctgcgga agccgtgcag tacgccaatc ggtgcgcccg
    28141 aagtaatcgg cgcggcgtgg tcaggcgtat ccacgcccaa accgcctgct tctacgccga
    28201 ccaaacgtac gttttcttct tcgatatagg gatagaacaa accgatggcg ttcgagccgc
    28261 cgccgacgca ggcaacggcg acgtcgggct gtctgccggt ggcttcctgc atctgcgctt
    28321 tggcttcgtt gccgatgacg cattggaaat cacgcaccat ttcgggatac ggcgcggggc
    28381 cggcggcggt gccgatgatg tagaacgtat cgtccactcg ggcgacccat tcgcgcatcg
    28441 cttcgttcat cgcgtctttc aaagtacggc tgccactgtc aacgccgatg acattcgcac
    28501 caagcagctt catacggaac acattcggca tttggcgttg aatatcgtcc gcacccatgt
    28561 acacgtcgca agtcatgccg aaacgtgcgg cgacggtggc agaagccacg ccgtgctgac
    28621 ccgcgccggt ttcggcgatg acgcgttttt tgcccatacg gcgggcaagc aatgcctgac
    28681 cgatggtgtt gttgaccttg tgcgcgccgg tgtggttcaa gtcttcgcgc ttcaaccaga
    28741 tttgcgcgcc gcccaaatgc tcggacaacc gcgcggcgtg gtaaacgggg ctgggcctgc
    28801 cgacataatg tttcaaatcg cggcggaact ccgcccaaaa ttcaggatcg tttttcgctt
    28861 cgttgtaggc ctgttccagc tctttcaaag cgggaatcag ggtttcggaa acataaagcc
    28921 cgccgtgttc gccgaaaaag cccttctcgt cgggcgcgtg gtagttcttc atcggattct
    28981 tccttatgct tcaggttttc agacggcatt tccgtttttt caaacatgcc gtctgaacgg
    29041 gaaattgtcg gcaattataa ctgcttttca cacaagcccg ccatttcgaa aaacgcccga
    29101 tacgccgctg cctttttcgc caaactcaaa ggataggcgc gcgaagtcga aggcaggcgc
    29161 gtcagtgtca aatcccgtcc ggcaaacgga aacggcacgg tttcgcccgt tttcggcatt
    29221 ttgatgccgc cgccctgaat atcgagcagg atttccgtcg ccttgccgcc tgtcgtacaa
    29281 atatggcggc agtctggtat tttcgccaac accgccgcca aatcgacggt ttcaactacc
    29341 tttaaaaact tgtcggacgc attgccgtgc tcccttgccg ccttcaacac ggtcggacag
    29401 gacgcaatcc cccgttcgtg caaaaacgcc ttgattttct ccgcgtcaaa cgctttttca
    29461 gagtgcgcag cctccccgtg ggacggcatc cggaaatgcg ccgcatcgtt aaaaaacacc
    29521 agcccgtaaa cgcgccacat atcgttttgg aaattcggat aatgaaactg catcgcgcgt
    29581 ttgtcttcct tgggcggaaa cgtccccatc atcatgaccg cagccttcgg cggcaacacg
    29641 ggatcgaagg gatgggtttc gatttcaagc agattttcag acacgttcaa tcctccaaca
    29701 ggcaaagcgg cagacagccg gtttgcacca aaccgccaaa cacggcaagc cttcaaacag
    29761 cattatcacg ccctgccgtt ttcggttaca atgccgacat caaacggata ctgtaaacac
    29821 atttatgttc caacacacag gacgacacat aaagcaccgc cctatgtgtc gtcctgattt
    29881 ggaaggggtt acgccccgcc caaacagagt ctgatcctgc cgccctaaag ggcggggttt
    29941 caaccgaaga ggaaacacga tgaaagaaca caaagcccgc aagcgtttcg ggcagaattt
    30001 tttgcaggac acgcggatta tcggcgatat tgtcaacgcc gtgcgcccgc aggcggatga
    30061 tgtcgtgatt gaaatcggcc cgggtttggc ggcaattacc gaacctttgg cgaaaaagct
    30121 gaaccgcctg cacgttgtcg aaatcgaccg cgac
//
LOCUS       DAWXHA010000009        30038 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.009, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000009 DAWXHA010000000
VERSION     DAWXHA010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30038
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.009"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(66..1208)
                     /locus_tag="AABD07_000341"
     CDS             complement(66..1208)
                     /locus_tag="AABD07_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2354945.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQAGSAPAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTVAITAKGK
                     ELLGGKLPENGWDLLFKPEYTRKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LTPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
     gene            1224..1406
                     /locus_tag="AABD07_000342"
     CDS             1224..1406
                     /locus_tag="AABD07_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354946.1"
                     /translation="MKEVGKKENPAPHKHPGARFGHCKVNLCKLKVYWTDFFENLTLL
                     RPKAEDVPDFAARARR"
     gene            1509..1772
                     /gene="rpsT"
                     /locus_tag="AABD07_000343"
     CDS             1509..1772
                     /gene="rpsT"
                     /locus_tag="AABD07_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009116575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HFB2354947.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            1932..3080
                     /locus_tag="AABD07_000344"
     CDS             1932..3080
                     /locus_tag="AABD07_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HFB2354948.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPTASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPFWYNNSPNYAPSSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAENLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDWDGI"
     gene            3222..3923
                     /locus_tag="AABD07_000345"
     CDS             3222..3923
                     /locus_tag="AABD07_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HFB2354949.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPQ
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPPEKAELPEQQ"
     gene            3981..5789
                     /gene="aspS"
                     /locus_tag="AABD07_000346"
     CDS             3981..5789
                     /gene="aspS"
                     /locus_tag="AABD07_000346"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HFB2354950.1"
                     /translation="MRTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQ
                     NGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTDAPNSVDDKQLRELSLRLRQKAVETKEA"
     gene            5939..6223
                     /locus_tag="AABD07_000347"
     CDS             5939..6223
                     /locus_tag="AABD07_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFB2354951.1"
                     /translation="MKKLLLAAVVSLNAATAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVYDVDADDYWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            6390..8282
                     /gene="speA"
                     /locus_tag="AABD07_000348"
     CDS             6390..8282
                     /gene="speA"
                     /locus_tag="AABD07_000348"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HFB2354952.1"
                     /translation="MPILTIREVCNINHWSIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPFLGFFMVGAYQEILGNMHNLFGDTATADVVVREDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            8381..9304
                     /gene="speB"
                     /locus_tag="AABD07_000349"
     CDS             8381..9304
                     /gene="speB"
                     /locus_tag="AABD07_000349"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HFB2354953.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSFGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLSAPKVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            9502..10968
                     /locus_tag="AABD07_000350"
     CDS             9502..10968
                     /locus_tag="AABD07_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007341442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFB2354954.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKVMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLSEMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFLAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFVMSVVNFLIFSVIGSIWWKVLGYW"
     gene            complement(11172..12206)
                     /locus_tag="AABD07_000351"
     CDS             complement(11172..12206)
                     /locus_tag="AABD07_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HFB2354955.1"
                     /translation="MNKTICRTAALLISGFSYANTVIPDVSPVAQGQHVFINIPQQRL
                     FLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKERGDGVKTIAA
                     GPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGIRSHGCVRMKSPDALEFAKTIATGS
                     PASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDTASLKKSIGQWAKTQGKTIAPEKV
                     DAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVIEQTEETNSAEVSET
                     RTPEVPDVHTPEAQAHLNTQSDGTPTAYTEPAADSSPQVESPDQAASEPVDVLFSIDV
                     IRQGNLRLGN"
     gene            12312..12449
                     /locus_tag="AABD07_000352"
     CDS             12312..12449
                     /locus_tag="AABD07_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HFB2354956.1"
                     /translation="MATETNIAEISALDYEGRGVAKVGGKTIFIKGALLDCLMLGCFR
                     L"
     gene            12471..13613
                     /gene="bioF"
                     /locus_tag="AABD07_000353"
     CDS             12471..13613
                     /gene="bioF"
                     /locus_tag="AABD07_000353"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HFB2354957.1"
                     /translation="MKVFRQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSETCIVPYILGGNEATLAK
                     AEYLQGQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAACL"
     gene            13623..14270
                     /locus_tag="AABD07_000354"
     CDS             13623..14270
                     /locus_tag="AABD07_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HFB2354958.1"
                     /translation="MKTKFYNHQGEHLILYFAGWGMPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRSKFERRICGDKASFEDYQQFPARPFDEIHQELTALFAMIGQDRR
                     TDLIRWTNALFGSGDKIFIPANQHRYWTPRCTVQETDGGHYLFSRFTHWSALWNH"
     gene            14258..15040
                     /gene="bioC"
                     /locus_tag="AABD07_000355"
     CDS             14258..15040
                     /gene="bioC"
                     /locus_tag="AABD07_000355"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HFB2354959.1"
                     /translation="MESLTAINKPRIRQAFQKALSDYDRHALIQQKMTINLIAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVRSRLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKTNGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQAWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFGMPSGKVRLTYHPLFFIARHSAAGRQ"
     gene            15282..16719
                     /locus_tag="AABD07_000356"
                     /pseudo
     CDS             15282..16719
                     /locus_tag="AABD07_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
     gene            16722..17820
                     /locus_tag="AABD07_000357"
                     /pseudo
     CDS             16722..17820
                     /locus_tag="AABD07_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            17832..18367
                     /locus_tag="AABD07_000358"
                     /pseudo
     CDS             17832..18367
                     /locus_tag="AABD07_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
     gene            18369..19011
                     /locus_tag="AABD07_000359"
                     /pseudo
     CDS             18369..19011
                     /locus_tag="AABD07_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
     gene            19032..19391
                     /locus_tag="AABD07_000360"
     CDS             19032..19391
                     /locus_tag="AABD07_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354960.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            19483..19558
                     /locus_tag="AABD07_000361"
     tRNA            19483..19558
                     /locus_tag="AABD07_000361"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19516..19518,aa:Asn,seq:gtt)
     gene            complement(20056..20967)
                     /gene="crgA"
                     /locus_tag="AABD07_000362"
     CDS             complement(20056..20967)
                     /gene="crgA"
                     /locus_tag="AABD07_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HFB2354961.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLEMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLNLTEEGAQYFRRAQRILQEMAAAETEMLAVHEVPQGVLRVDSAMP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSHFRVVASPEYLAKHGTPQSAEDLANHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSSCGIACLSDFLVDNDITEGKLIPLFAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVKELGKNMNRTNTK"
     gene            21206..21784
                     /locus_tag="AABD07_000363"
                     /pseudo
     CDS             21206..21784
                     /locus_tag="AABD07_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
     gene            complement(21992..23377)
                     /gene="pntB"
                     /locus_tag="AABD07_000364"
     CDS             complement(21992..23377)
                     /gene="pntB"
                     /locus_tag="AABD07_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HFB2354962.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKRGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIHKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIEPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLAAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     ISSSGSQEIEEYREVKAADVAEMLKGASSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     IEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDGILAELKK"
     gene            complement(23457..23840)
                     /locus_tag="AABD07_000365"
     CDS             complement(23457..23840)
                     /locus_tag="AABD07_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354963.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRGFLAHTQ
                     GAAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(23844..25382)
                     /locus_tag="AABD07_000366"
     CDS             complement(23844..25382)
                     /locus_tag="AABD07_000366"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HFB2354964.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLKEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFLQ
                     ESGGGGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVNL
                     TKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSARPQQTPSEKAAPAAK
                     PEPKPVPLWKKLAPAAIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYHVVWNVSHSL
                     HTPLMSVTNAISGIIVVGALLQIGQGNGFVSLLSFVAILIAGINIFGGFAVTRRMLNM
                     FKKG"
     gene            25671..26504
                     /gene="serB"
                     /locus_tag="AABD07_000367"
     CDS             25671..26504
                     /gene="serB"
                     /locus_tag="AABD07_000367"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HFB2354965.1"
                     /translation="MPQALVLQFPSAEALPSDFPSRLPEPDYADEKRMRFIVEEGFSL
                     SEKDAALLDSRQIDHAVLPNMAFGELGLIVSDMDSTLITIECIDEIAAGVGLKGKVAE
                     ITERAMRGELDFEQSLRSRVALLAGLDEQILADIYENVLKLSPGAEFLLDECKRHNVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANILEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPILKEAGIGVAYRAKPKARAAADACINFGGLERVRGLF
                     G"
     gene            26568..27791
                     /locus_tag="AABD07_000368"
     CDS             26568..27791
                     /locus_tag="AABD07_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HFB2354966.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIRHTAYGYDADGAY
                     ISFREGVAQAFGMRRVAMLTLCGAIAGGGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEGEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLAV
                     NTSLLWFSAVIGPILGATAVFFRRTAQKFPFIKRDNIKIIPLAVCMFVLIGVIAVWFP
                     EILGNGKAGNQLTFGGLTGWQYSLELTAVKWAVVLMALAAGAYGGLITPSMVLGSTIS
                     FAAAAAWNSVFPEMPSESAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            27952..29532
                     /gene="purH"
                     /locus_tag="AABD07_000369"
     CDS             27952..29532
                     /gene="purH"
                     /locus_tag="AABD07_000369"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HFB2354967.1"
                     /translation="MSVIKRALISLCDKAGAVEFAQTLHKLGVEILSTGGTAKLLAGA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPGCTLEDAIENIDIGGPAMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     AGNGALSDKTRFNLSRKAFSHTAEYDGMISNYLTSLSDGVLSGEPEIGEFPSRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIHPAAGSLSAYNQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLAAYKLAYATDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLKAGANRFELKRVGGGLLVQTPDINR
                     INRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDAGLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMAVTGIRHFRH"
BASE COUNT         7336 a         7329 c         7882 g         7491 t
ORIGIN      
        1 tctatttcca tccaatataa aatgccgtcc gaacatcgtt cggacggcat ttttaatgct
       61 tcgaatcagt tggtgccgac tttgattttc tgccacaggc tgaccgacag ttttttcgca
      121 tccgtgctca tttgcggcat gacgaaaccg tctttcatat cctgctcgtt cgggaagatg
      181 gaacgggtgt tcaccaactc ggcaggcatt ttttcgcgcg ccggtttgct ggcgggggcg
      241 aaggttacgg cgatgccgtt tttcgccgcg atttcggggt cgagcgtgta gttgatgtat
      301 ttgtgggcgt tggcgacgtt tttcgcatcg gcgggaatca gccaagactc aatccagaag
      361 cccatacctt tcggtgtcag cacttcgatg ccgacgttgt ttttcacttc ttcggaacgc
      421 gctttcgcca agttcaaatc gccgccgttg cctgccgcca ggcagatgtc gccgcgcgcc
      481 agctcgtcga tgatggacgg gctgaaacgt ttgacgtccg gacggataga cttcaacact
      541 tccgccgccg ccttcaaatc ttcaggattc gaacctttgg ggtctttgcc caagtagttc
      601 agcaaaatcg ggaacatttc gctcggggtg tcccacaagg cgatgccgca ggatttcagc
      661 ttgcgggtgt attcgggttt gaacagcaaa tcccagccgt tttcgggcag cttgccgccc
      721 aaaagctctt tgcccttcgc cgtaatcgca accgtgttca cgccggagaa ataggggacg
      781 gcatactggt tgcccgggtc ggcggtttcc agcattttca agagttcggg atcgatgttt
      841 ttatagttgg gaatcaggtc tttgttgact ttttgatacg cgcccgcctc gatttggcgc
      901 ggcaggaagg cgatgcccgg cacaaccaaa tcgtaaccgg atttgccggt cagcattttg
      961 gcttccagcg tttcgttgtt ttcgtacaag tcgtaagtca gcttcagatt gttggctttt
     1021 ttaaagtctt cgaccgtact ctcgtcaaca taattcgacc agttgtagat gttcagagta
     1081 tcggtggcag cggcttcggc attggcagca ggtgcgctgc ctgcttgagg ctgcacggcg
     1141 tttttttcgc tgccgccgca ggctgccaga gacagcgcgg ccaaaacggc taatacggat
     1201 tttttcatac gggcagattc ctgatgaaag aggttggaaa aaaagaaaac cccgcgcccc
     1261 ataaacaccc cggcgcaagg tttgggcatt gtaaagtaaa tttgtgcaaa ctcaaagtat
     1321 attggactga tttttttgaa aatttgacac ttttgcgccc aaaggcggag gatgtgccgg
     1381 attttgccgc ccgcgcgcgc cggtaaaacg gcttatggga aaataaaggg aaaaggcttg
     1441 catataatgc aaaccccctt taaaattgcg cgtttacaga atttattttt ctttcaggag
     1501 attccaatat ggcaaacagc gcacaagcac gcaaacgtgc ccgccagtcc gtcaaacaac
     1561 gcgcccacaa cgctagcctg cgtaccgcat tccgcaccgc agtgaaaaaa gtattgaaag
     1621 cagtcgaagc aggcgataaa gctgccgcac aagcggttta ccaagagtcc gtcaaagtca
     1681 tcgaccgcat cgccgacaaa ggcgtgtttc ataaaaacaa agcggctcgc cacaaaagcc
     1741 gtctgtctgc aaaagtaaaa gcactggctt gatttttgca aaaccgccaa ggcggttgat
     1801 acgcgataag cggaaaaccc tgaagcccga cggtttcggg gttttctgta tttcgggggt
     1861 aaagttcgaa atggcggaaa gggtgcggtt ttttatccga atccgctata aaatgccgtt
     1921 tgaaaaccaa tatgccgaca atgggggcgg agatgaatac acgaaatatg cgctatattc
     1981 ttttgacagg actgttgccg acggcatccg cttttggaga gaccgcgctg caatgcgccg
     2041 ctttgacgga caatgttacg cgtttggcgt gttacgacag gatttttgcg gcacagcttc
     2101 cgtcttcggc agggcaggaa gggcaggagt cgaaagccgt actcaatctg acggaaaccg
     2161 tccgcagcag cttggataag ggcgaggcgg tcattgttgt tgaaaaaggc ggggatgcgc
     2221 ttcctgccga cagtgcgggc gaaaccgccg atatctatac gcctttgagc ctgatgtacg
     2281 acttggacaa aaacgatttg cgcgggctgt tgggcgtacg cgaacacaat ccgatgtacc
     2341 ttatgccgtt ttggtataac aattcgccca actatgcccc gagttcgccg acgcgcggta
     2401 cgactgtaca ggaaaaattc ggacagcaga aacgtgcgga aaccaaattg caggtttcgt
     2461 tcaaaagcaa aattgccgaa aatttgttta aaacccgcgc ggatctgtgg ttcggctaca
     2521 cccaaagatc cgattggcag atttacaacc aaggcaggaa atccgcgccg ttccgcaata
     2581 cggattacaa acctgaaatt ttcctgaccc agcctgtgaa ggcggatttg ccgttcggcg
     2641 gcaggctgcg tatgctcggt gcgggttttg tccaccagtc caacggacag agccgtcccg
     2701 aatcgcgttc gtggaacagg atttatgcca tggcaggcat ggaatggggc aaattgacgg
     2761 tgattccgcg cgtgtgggtg cgtgcgttcg atcagagcgg cgataaaaac gacaatcccg
     2821 atattgccga ctatatgggg tatggcgacg tgaagctgca gtaccgcctg aacgacaggc
     2881 agaatgtgta ttccgtattg cgctacaacc ccaaaacggg ctacggcgcg attgaagccg
     2941 cctacacgtt tccgattaag ggcaaactca aaggcgtggt acgcggattc cacggttacg
     3001 gcgagagcct gatcgactac aaccacaagc agaacggtat cggtatcggg ttgatgttca
     3061 acgactggga cggcatctga ataccgtttc aaacggcata tcaagttgcc gtgccgtctg
     3121 aagccgccgg cggtttggcg gggcgggata aaaaattcgt ttgaatccgg gcaaacgcgt
     3181 ataatgtgcg gtttgtacgg actttgtcgg aatcaagcaa gatgacggaa cctgcggccg
     3241 aaggcggcaa agctgccaag gcgttaaaaa aatatctgat tacaggcatt ttggtctggc
     3301 tgccgattgc ggtaacggtt tgggtggttt cctatatcgt ttccgcgtcc gaccagcttg
     3361 tcaacctgct gccgaagcaa tggcggccgc aatatgtttt ggggtttaat atccccgggc
     3421 tcggcgttat tgttgccatt gccgtattgt ttgtaaccgg gttatttgcc gcaaacgtgt
     3481 tgggccggca gattcttgcc gcgtgggaca gcctgttggg tcggattccg gttgtcaaat
     3541 ccatctattc gagtgtgaaa aaagtatccg aatcgctgct gtccgacagc agccgttcgt
     3601 ttaaaacgcc ggtactcgtg ccgtttcccc aatcgggtat ttggacaatc gcattcgtgt
     3661 ccggtcaggt gtcgaatgcg gttaaggccg cattgccgca ggatggcgat tatctttccg
     3721 tgtatgtccc gaccacgccc aacccgaccg gcggttacta tattatggta aagaaaagcg
     3781 atgtgcgcga actcgatatg agcgtggacg aagcgttgaa atatgtgatt tcgctgggta
     3841 tggtcatccc tgacgacctg cccgtcaaaa cattggcagg acctatgccg cctgaaaagg
     3901 cggagttgcc cgaacaacaa taaagccgcc gttcagacgg cattttccgt tttcagttta
     3961 aatcaataaa aggtgatttt atgcgtacca actattgcgg cctgatcagc gagcaatact
     4021 taggccaaac cgttaccgtc aaaggctggg tacaccgccg gcgcgaccac ggcggtgtga
     4081 tttttatcga cctgcgcgac cgcgaaggca tcgtccaagt cgtgatcgat cccgacacgc
     4141 ccgaagcgtt tgccgctgcc gattccgccc gtaacgaata cgttttgggc attaccggcc
     4201 gcgtacgcaa ccgtcccgaa ggcacgacca acgacaaaat gatttccggc aaaatcgaga
     4261 ttcttgccaa agaaatcgaa gtgttgaacg ccgccgctac gccgccgttc caaatcgacg
     4321 acgaaaacat cagcgaaaac gtgcgcctga ccaaccgcgt tatcgacctg cgccgccctg
     4381 tgatgcagcg caacctgcgc ctgcgttacc aagtcgctat gggcgttcgc cgttatctgg
     4441 acgcacaagg cttcatcgac atcgaaacgc cgatgctgac ccgctccact ccggaaggcg
     4501 cgcgcgacta cctcgtaccg agccgcgttc atccgggcga gtttttcgcg ctgccgcaat
     4561 cgccgcaatt attcaaacaa ctgttgatgg tggcgggttt cgaccgttac taccaaatca
     4621 ccaagtgctt ccgtgacgaa gacttgcgcg ccgaccgcca acctgaattc actcaaatcg
     4681 acttggaaac ctcgttcctg aacgaggatg aaatcatgga catcactgaa ggcatggcca
     4741 aacaagtctt caaagatgct ttgaacgtag atttgggcga cttcccacgc atgccttatt
     4801 ctgaagccat gttctactac ggctctgaca aaccggacat gcgcatcaac ttaaaattca
     4861 ccgagttgac cgacctgatg aaaacggaag aattcaaagt cttccgtggc gcagccgaca
     4921 tgaaaggcgg ccgcgtagtc gctctgcgcg tgcctaacgg cgccaaattc agccgcaaag
     4981 aaatcgacga atacactaaa tttgtcggca tctacggcgc gaaaggtctg gcatacatca
     5041 aagtaaacga tgcgggcaac ctctccaacg gcgaagacag cggcctgcaa tctccaatcg
     5101 taaaattctt gtctgaaaac gccctgaaag aaatcatcga gcgtaccgcc gcgcaaaacg
     5161 gcgacatcat cttcttcggt gcggacaaag ccaaagtcgt gaacgaagcc gtcggcgcat
     5221 tgcgtatcaa agtcggcttg gaacacggca aagacaacgg ctacttcaca gacgaatgga
     5281 aacctttgtg ggttgtcgat ttcccgatgt tcgaatacga cgaagaagcc gaccgctacg
     5341 ttgccgtaca ccatccgttt accgctccta aagaaggtca tgaagacctg atggtttccg
     5401 atcctgcaaa ctgcctggcc cgtgcctacg atatggtatt gaacggctgg gaaatcggcg
     5461 gaggctctat ccgtatccac cgtgcagacg tacaagagaa agtgtttgcc gcgctgaaaa
     5521 tcagccctga agagcaacaa gagaaattcg gcttcctctt ggacaacctg aaattcggtg
     5581 cgcctcctca cggcggcctt gcattcggcc tcgaccgtct ggtaacgctg atgaccggtg
     5641 ccgaatccat ccgcgacgtg attgccttcc cgaaaacaca acgcgcccaa tgcctgctga
     5701 ccgatgcgcc caacagcgtg gacgataagc agttgcgtga attgagcctg cgtctgcgtc
     5761 aaaaagcagt tgaaacaaaa gaagcataag gaaaacagag ccgtttgacg gctctgtttt
     5821 ttcagacggc atttacgctt cttgacttcc ctctaattca aacctaattt tgctgtgttt
     5881 taatggcggt attgaaaaac acatcttgtt caatcaaccg ataaaaaaag gactgaaaat
     5941 gaaaaaactg ttattggccg ccgttgtttc cctaaatgcc gcaaccgcat ttgccggcga
     6001 ctctgccgag cgtcagattt acggcgatcc ccattttgaa caaaaccgca caaaagccgt
     6061 gaaaatgttg gaacagcgcg gttatcaggt ttacgatgtc gatgccgacg actactgggg
     6121 caaacctgtt ttggaagtgg aagcctataa agacggccgc gaatacgaca tcgtgttgtc
     6181 ttaccccgac ctgaaaatca tcaaagagca gctcgatcgc tgactccttt gatggaaaga
     6241 tgaaccaaaa tgccgtctga agcgttcaga cggcattttg cctgttcctc atcaggtatg
     6301 aggcaggctt ttcttattaa aaaaatgaca tttcacgctg atttgttata atcattcctt
     6361 ttcaacacga cagacggagc aggtttatta tgcctatcct taccatccgt gaagtgtgca
     6421 acattaatca ttggagcata ggttattatg atgttgacga ttccggcgaa atcatcgtcc
     6481 gccccaatcc ctcgcaacac aatcaaactg tttcactgca aaaactgact gaagccgtgc
     6541 aacaaaaaca tcaggcgcgc ctgcctgttt tgttttgttt tccgcaaatc ctcgaacacc
     6601 gcctccgcga cattaaccgc gcctttcaga cggcacggga agagtgcggc tataagggcg
     6661 gttattgttt ggtttaccct atcaaggtca accaacaccg ccgcgtcatc gagtcgctta
     6721 tgtcaagcgg acaaccgcat ggtttggaag ccggttctaa agccgaactg atggcggttt
     6781 tggcacacgc cggcacccgg caaacattaa tcgtctgcaa cggctataaa gaccgtgaat
     6841 atatccgttt cgccttgatg ggcgaaaaac tggggcatca ggtttatttg gtgattgaga
     6901 agctgtccga aatacaaatg gtattggaag aggcggaaaa actcggcatc aagccccgtt
     6961 tgggtgtgcg cgccagactg gcttcccaag gttcgggaaa atggcagtct tcgggtgggg
     7021 aaaaatcaaa attcggcttg tcggcttccc aagttttgca actggtcgat attttgaaac
     7081 aaaaaaacag gctggactgc ctgcagcttt tgcatttcca tttgggctcg cagcttggga
     7141 acatccgtga tgttgccaca ggtgtacacg aatcggctcg gttttatgtt gagttgcaca
     7201 aactgggggt aaatatccgc tgttttgatg taggtggcgg gcttggcgtg gattacgaag
     7261 gaaaccgcac acaatcggat tgttccgtta attacagcct gaacgaatat gccgccacag
     7321 tcgtatgggg catcagtcag gcttgtctcg aacacgggct gccgcatccg acaatcatta
     7381 ccgagagcgg gcgcggcatt accgcacatc acgccgtttt ggttgctaat gttataggcg
     7441 ttgaacgtta caaaccgcgt cggctggatg cgccatcgcc cgaagcaccg cgtgtgttgc
     7501 acagtatgtg ggaaacttgg acggatattt ccgcctcgcg ggaaaaacgt tccttacgca
     7561 gctggataca cgaagggcag tttgatcttg ccgatgtgca taatcagtat aatgtcgggc
     7621 tgttgagttt ggcgcaacgt gcgtgggcgg agcaactgta tttaaatatc tgtcatgaag
     7681 tcggcgaatt gtttaatgaa aaacaccggt ctcaccgaac cattattgac gaattgcaag
     7741 aacgttttgc cgataagctg tatgtcaatt tctcactctt ccaatctttg cccgatgctt
     7801 ggggcataga tcaacttttc cctgtttgtc ctattaccgg tttgaatgaa ccgattgcgc
     7861 gccgcgccgt gttgttggac attacctgcg attcagacgg tacgattgac cactacatcg
     7921 acggcgacgg catcgccggt acgatgccta tgcctgatta tcccgaagaa gagccgccgt
     7981 ttttaggctt ttttatggtg ggagcatatc aggaaatact cggcaatatg cacaatcttt
     8041 tcggcgacac tgccactgct gatgttgttg taagggaaga cggacaattt accgtcatcg
     8101 attacgatga aggaaacacc gttgccgata tgctcgaata cgtttatcaa gatccgaaag
     8161 agctgatgaa acgctatcgc gaacaaatcg aacattcaga ccttcctgcc tcgcaggcta
     8221 tgtctttctt aaaagaactc gaagcggggc ttaatggtta tacctatttg gaagacgaat
     8281 agacgcatca aggtatcgga tatgtcgtct gaagcccgat tttcttactc aaacaccaat
     8341 catcacgacc gattgaaacc aattacaagg aatcattacg atgcaataca gcacactggc
     8401 aggacaaacc gacaactccc tcgtttccaa taatttcggg tttttgcgcc tgccgcttaa
     8461 ttttatgccg tatgaaagcc atgccgattg ggttattacc ggcgtgcctt atgatatggc
     8521 ggtttcaggg cgttccggcg cgcgtttcgg tcctgaagcc atccggcgcg cctccgtcaa
     8581 cctcgcttgg gagcaccgca ggtttccgtg gacatttgat gtgcgcgaac gcctgaacat
     8641 tattgattgc ggcgacttgg ttttttcttt tggcgacagc agggattttg tcgaaaaaat
     8701 ggaagcgcac gccggcaaat tactttcttt cggcaaacgc tgtttgagtt tgggcggcga
     8761 ccatttcatt accctcccgt tgttgcgcgc ccacgcccgc tatttcggca aactcgcact
     8821 gattcatttt gacgcgcaca ccgacaccta cgacaacggc agcgaatacg accacggcac
     8881 gatgttttat accgccccca aggaaggcct catcgacccg tcccgttccg tacaaatcgg
     8941 catacgcacc gaacacagta aaaaattgcc ttttactgtg ttgtccgccc ccaaagtcaa
     9001 tgaagacagt gttgaagaga ccgtccgtaa aatcaaagaa accgtcggca atatgcccgt
     9061 ttacctgact ttcgacatag actgtctcga cccgtcgttc gcccccggga ccggtacgcc
     9121 cgtatgcggc ggcttgagca gcgacagggc attaaaaatc ctacgtgggc tgacggatct
     9181 cgacatcgtc ggtatggatg ttgtagaagt tgccccctct tacgaccaat ccgacattac
     9241 cgctttggcc ggcgccacaa ttgccttgga aatgctttac cttcaaggtg cgaaaaagga
     9301 ctgaacgtcc ggcatccccc gggttttcgc cgtgccgttc aaacggcgta ttcagtctaa
     9361 tgaaaattca aatactgaaa caaaagttgc ccggagccgc atatcggaaa gacggtgaaa
     9421 tatcgtaata taacttataa aacaattagt taaatattat ttttccgatt tttcgggacg
     9481 gtctttttta cggaggtcaa tatgatgaaa ttgggtttca aaccgatacc cctcgccatt
     9541 gccgcagtat tgtgcgccct ggttttggca ctgcccgtac ccgacggggt caagcctcag
     9601 gcttggacgc tgctggctat gtttgtcggt gtgattgccg ccattatcgg caaggttatg
     9661 ccgttgggcg cgctgtcgat tattgccgtc gggttggtcg cagtaaccgg cgtaaccgcc
     9721 gacaaaccgg gcgcggcgat gagcgatgcg ttgagtgcgt tcgccaatcc gttgatttgg
     9781 ctgattgcca tcgcagttat gatttcgcgc ggtttgctca aaacagggct ggggatgcgt
     9841 atcggatatt tgtttatcgc cgtttttgga agaaaaacgc tgggcatcgg ttacagtctc
     9901 gctctttccg aactgctgct ggctcccgtt accccttcca ataccgcgcg cggcggcggc
     9961 attatacatc cgattatgca gtcgattgcc ggcagttacg gctccaatcc cgcaaaaggc
    10021 acagaaggca agatgggtaa atatttggct ttggtcaatt atcattccaa tcccatttcg
    10081 tcggctatgt ttattactgc aactgccccc aaccctttaa tcgtcaactt gattgccgaa
    10141 aatttaggca gtagtttccg tctttcttgg ggggcgtggg cgtgggcaat ggctgttccc
    10201 ggcgttatcg cctttttcgt tatgcctttg attttatatt ttttgtatcc gcctgaaatt
    10261 aaagaaacgc ccaatgctgt tcaatttgcc aaagaccgtc tgagcgagat gggtaaaatg
    10321 tcggcagacg aaatcattat ggcggtcatt ttcggtatct tgctgctgtt gtgggcagat
    10381 gttcccgccc ttattaccgg caatcacgct tttagtatca acgccaccgc caccgcattt
    10441 atcggattaa gcctgctttt gctttccggt gtattgactt gggacgatgt tttgaaagaa
    10501 aaaagcgcgt gggatacgat tatttggttt ggcgcattga ttatgatggc cgcattttta
    10561 aataaactcg gactgattaa atggttctcc ggagtgttgg cggaaagtgt cggcggtttg
    10621 ggcgttagcg gcacggctgc gggcgtaatc ctcgtgcttg cttatatgta tgcgcattat
    10681 atgtttgcca gtactactgc acatattacc gctatgttcg gcgcatttct cgctgctgcc
    10741 gtttcactga atgccccggc gatgccgacc gcgctgatga tggcggccgc atccaacatt
    10801 atgatgaccc tcactcatta tgcgaccggt acttcacctg tgattttcgg ctcgggctac
    10861 accacaatgg gagaatggtg gaaggcgggt tttgtcatga gcgtagtcaa ttttctgatt
    10921 ttttccgtta tcggcagcat ttggtggaaa gttctgggat attggtaaag ggaaaaataa
    10981 atttccaatc tgtgtttatt tgattgggcg actattatcg tgaaatatgc cgtctaaagc
    11041 cttcagacgg catatttgtg cgcttggatg ttgcagaaag cggcagggcg gcggtgtagg
    11101 aaaagccaaa caaaaaccaa accgcctgtc aacttctgat aaacataagt attaaataat
    11161 cagaaggtta ttcaattacc taaacgcaaa ttcccctgcc gtatcacatc tattgaaaat
    11221 aatacatcaa ccggctcgga agcagcctga tcaggtgatt ctacttgcgg cgatgaatcg
    11281 gcagccggtt cggtataggc agtcggcgtg ccgtcggatt gggtatttaa atgcgcttgt
    11341 gcctcgggcg tgtgtacatc aggcacttcg ggcgtgcgtg tctcggatac ttcggcagag
    11401 ttggtttcct cagtttgttc aatgacttca gcttggctgt atgaggaaga accctgtatc
    11461 cacgccagcg atttgagcgg catcttcatc ttgccgtttt tgccgcaggt cagacagacg
    11521 gccgatccgg tgcggtcttt gagtacggca tcgactttct cgggcgcgat ggttttgccc
    11581 tgtgtttttg cccattgccc gatgcttttt ttcagggagg cggtgtcaag gttgttctta
    11641 ccgtaagggt cgcggaaggc ggcaagccac aggttgcgat ccgcatcttc attgaggccc
    11701 gccatttgat agatgacgga ggcgggcgag ccggtggcga tggttttggc aaactcgagc
    11761 gcgtcgggcg atttcatgcg gacgcagccg tgactccgga tgcccgggac gctggccggt
    11821 gcattggttc cgtgtatgcc caaaccgagt ttcgggtctc ctaagcggac aaaaaccggc
    11881 cccaaagggt tgtccgggcc ggcggctatg gtttttacgc cgtcgccgcg ttctttctgt
    11941 atggattttg ggatgtgcca aacagggtta taggctttcg ccccgatttt atgttcgcct
    12001 agattggttt gtgtcatcgc ccgacctact gcaacgggat aaaccttggt cagtttgccg
    12061 tcggtgtaga ggaacaggcg ttgctgaggg atgttaatga agacatgttg accttgtgcg
    12121 acgggggaga catcgggaat gacggtgttt gcgtatgaaa aaccgcttat caatagtgcg
    12181 gcagtgcggc agattgtttt attcatatca aaatatggtg tgtgtccgat aggttttcgg
    12241 caaatcatac ctgaaaccgt accaatttgt gcgaaaatat gcgcttcggt acagtgcgga
    12301 cggattgggt aatggcaacg gaaacaaata tcgcggaaat ttccgccttg gattatgaag
    12361 gcaggggtgt ggcaaaggtc ggcggcaaaa cgattttcat taaaggggca ttacttgatt
    12421 gtttgatgct gggttgcttc aggctttaac tcaggaatat ttacatcata atgaaagttt
    12481 ttagacaaca gcttgaacaa ctcggcgcgc aaaatcaata tcgttcgatt ccggatttga
    12541 ttcatcaagg gcggtatatt acgcgggaaa accgcaaaat gctgaatatg tcgtctaatg
    12601 attatttggg gttggcatca gatgaaaact tacgccggtc ttttttgcag caatacggcg
    12661 gtaattttcc ctcttttacc agttcttcat cacgtttatt aacgggcaac tttcctattt
    12721 ataccgattt ggaagagctt gtcgcacaac gtttccaacg ggaaagcgcg ttattgttca
    12781 acagcggcta tcacgccaat ctcggtattt tgcctgcttt gacgacgacg aaaagtttga
    12841 ttttggcaga taaattcgtt cacgccagta tgattgacgg catccgtttg agccggtgtg
    12901 cgtttttccg ttatcgtcat aatgattatg aacatttgaa aaatctgctt gaaaaaaacg
    12961 tcggaaaatt tgaccgcact tttatcgtta ccgaatctgt tttcagtatg gatggcgatg
    13021 tggcggattt gaaacagctt gtccaattaa aaaaacagtt tcccaatact tatctttatg
    13081 tggatgaagc ccacgcaatc ggtgtttatg ggcaaaacgg attggggatt gccgaacggg
    13141 ataatctgat tgccgagatt gatttattgg tcggcacttt cggtaaagcc ttagcctcgg
    13201 tgggggcgta tgccgtctgc aaccaagtat tgaaagaatg tttgattaat caaatgcgcc
    13261 cattgatttt ttcaaccgca ttgccgccgt ttaatgtggc ttggacttat tttatttttg
    13321 aacgattgcc gcaattctca aaagaaagaa gtcatcttga gcagttaagc gcatttttac
    13381 ggcgggaagt ggcgcatcgg acgcaaataa tgccgagcga aacctgtatc gtcccctata
    13441 ttttaggcgg gaatgaagcc acccttgcca aagcggaata tctgcaaggt cagggttatt
    13501 attgcctgcc catcagaccg ccgacagtac caaaaaacac atccagaatc cgcctgtctt
    13561 taactgccga tatgacaacg gatgaagttc ggcagtttgc ggcgtgcctg taaggatatg
    13621 atatgaaaac aaaattttac aatcatcaag gcgaacattt aatcctgtat tttgcaggtt
    13681 ggggaatgcc gcccgatgct gtaaatcatt tgattttgcc ggaaaatcac gatttattga
    13741 tttgctatga ttatcaagat ttaaatttgg attttgattt ttccgcctat cggcacatcc
    13801 gtttggtggc gtggtcaatg ggcgtttggg cggcagagag ggcattgcaa ggaataagat
    13861 taaaatccgc aacggcagtg aatggcacag gtttgccttg cgatgataat ttcggtatcc
    13921 cttgcgccgt ttttaaaggc acattggaga atctcacaga aaatactcgt tcaaagtttg
    13981 aacgtagaat ctgtggcgat aaagcatctt ttgaagatta ccaacaattt cccgcccgtc
    14041 cgtttgacga aattcatcaa gaacttaccg cactttttgc gatgatcggg caagataggc
    14101 gtacagatct tatccgctgg acaaacgcct tgttcggatc gggcgataaa atttttattc
    14161 ctgccaatca gcaccgatat tggacaccgc gttgcaccgt tcaagaaaca gacggcgggc
    14221 attacctgtt ttcaagattt acccattggt cggcactatg gaatcactga ctgccataaa
    14281 taaaccgcgc attcggcagg ctttccaaaa agcattaagc gattatgaca ggcacgcctt
    14341 aatccaacaa aaaatgacga ttaatctaat cgcgcatttg caagattatt tgccggatat
    14401 gccattggaa aacgtgttgg aattgggctg cggctcagga atgttgagtg ccttgctgca
    14461 aaaacagatt tcagcgaatt attggttatt taatgatttg tgcgatgtac gaagccgact
    14521 ggctgaaaaa ttgcctcaat cctttgattt ttattgcggc gatgcggaaa actttccttt
    14581 tcaacgacaa tttgacttaa tcgcaagcgc atctgccgtg caatggtttc accaacccga
    14641 cgcttttatc gcccattgca aaacaggctt gaaaacaaac ggattattgg cggttgcgac
    14701 ctttggcaaa gacaatttaa aagaagtccg ccaaatcaca aatataggct taaattaccc
    14761 gactttatcc caatggcagg cttggttagc caaagatttt gagcttttat ggtgtgagga
    14821 ttttaaggta atactagact ttgatacgcc gttagatgta ctcaaacacc ttaaatatac
    14881 aggcgttacc gccacgaacc aaaaaaattg gacaagaaaa aatctcaatg gatttattgg
    14941 cgattacttg tcggcgttcg gtatgccgtc gggcaaagtg cgcctgactt atcatccgtt
    15001 attttttatc gcgcgccact ctgcggcggg caggcaataa ggcagcttat gggcaaagtt
    15061 atttttatat cgggtattga tactgatgtg ggtaaaaggt aatatggcga gccttatgca
    15121 gaaggcatat tgtcaaacgt taaattatgg tatgatttaa aatttacaag tctatttcag
    15181 taaatcgtta ataataaaag cggacaattt aataataaaa gcggataatt ggccgttgca
    15241 ggcggtcagc tatccgctcg ttacggtatc gggggtttcc tttggaaaac tcattaatta
    15301 tcggtctggc actggcggta ttgctgatgc ttttggttat gcgtgcgaag cagggtaaga
    15361 aaacaccgaa gcgcaaatcc caaggtgtcg gcaatacgca ggggcagccg cccggaagca
    15421 atgattcgga ctgggtcgat cagacttggt caatcggttt cagacggcac gcaactcgac
    15481 tggtcttgga acgaaagtgc cgagaccgca tccgccgccg tatccgcgca agaagtcgat
    15541 ccgcttacgg agtatcaggt ttataagcaa ttcggttatc agggcaaggc tgccgaatct
    15601 ttggctgcct atctggacgg cattccggat ggtgaagcga aacctgagaa ccttatccgc
    15661 gagctgatcg atatcaatct cgaagtgggg gatgtcgatg ttttggcaga caatctgcaa
    15721 aaatacggca gactgattcc tttcgaactt ttggcaaaat atatcgaaca ggcattacag
    15781 cgagattcaa accatttgcg tatccgcgtc ttggcggaag aaggtttggg atagggcact
    15841 caggagattg aaaaacgtgc ggaaggcggt tctgcgacgg cagcttccgc atcgcccccg
    15901 ccggatgtcg gcggtaaggc ttatggagcc gaagaaatca agcgcatccc gattgtgcgg
    15961 ggcaaaaaag acgtgtccgg aatcagccaa gagaaaatcg gtgcgattgc cggcctggtc
    16021 cgcgccgatc aaggtgcgaa aatccttaaa gacaaagtca gccacgaaac ggcatcgaaa
    16081 caatacgacc gtgccatcca aacttccgaa aaacctgcaa acctgattat cgatgcgttg
    16141 aaactcgatt accaacacgc ggacataggc cgttttgccg gacatttgtg gaaactttac
    16201 caaacgttgg gcaactacgg caggcaggtt aaagagcgga tgctgggtta ggggtacagc
    16261 ctgggttacc atgaagtttt cgatgatttg gaaaaggggg cgaacgatcg gcaaatcaaa
    16321 gacatcggta tgaggcacgg gtatctgccg aaaaatatac agaaattcaa agcgcaacat
    16381 cgggatttgg tgcttcaaga ttcttcgttg atcaacactg gttcgtctcc ggcagacgat
    16441 gcggttaaag aagtagagtc gttgctgatg tatggtcaga ttgaagcggc aatggatgtg
    16501 ttggagcagg cggtattgaa atatcccgac gaatcccagc tttatattac gttgatcgat
    16561 atttatgaac gtactgaaga ttgggatagg ttggggcagt ttttaagggt attgagggaa
    16621 cgtgcggaca ggcttcctga agaggtcgtt atgctgatga gccggctgct gcagcgtatg
    16681 aatcaaaata ttaaaaaaat aaaacggtac ggaaaataaa aatggaagtt caactgccga
    16741 aaattaaaac agtacgcgta atgttggcgg ggatgacggc gcagcaggaa tccgttttca
    16801 aaatggcatt caaaatgcac aataccaccc gttatgaaac agtatcccct tcagacggca
    16861 gtgccgtgcc cgatttggtt ttggcggata ccgatgccga gggcggtttt gaactttgga
    16921 aagagcttgc cgggcgttat aaggctatac ccgtcgccgt ctgttcggag aaagttcccg
    16981 attctgaagt tccctacctg cccaaaccga ttcggtttga aacattgttt cctatgctcc
    17041 gcaagttatt gcagggcgag aatgtttatg ggaaatcgtt tattgcaccc gcagaccggt
    17101 cggcgaaaaa caacgggaat gtgcagcgta cggttacgat acgccagttt aacccgaata
    17161 aaggattatt gggggcgttg cggtttgcgg aaaagaacag gcaggacatc gctatcttgc
    17221 atggaaataa gccggtcctt aattgttttc ccctcgatac aacgggtttt gctgacagaa
    17281 agtgtgtaaa aactcgaaga attgtgcaaa gacgaaaatt tgcaggtcag ttgcaagact
    17341 gttcccgata actcgcaatg gcgcgaaaag gctaaagtag gcattatgtc ctgtatgtgg
    17401 cagttttcca tttggacggc gcaggacagg ttgatttatc cgatttttcc cgatactccg
    17461 tttacgttga aatcttggcc aaacctgacc cggtaggcaa atgtgccggg gtcgatacgc
    17521 ttgtcggcat ttttgaccaa ggcatccgtc aaccttaacg tgttgtataa agtgatgcct
    17581 ttaaacctca atgatattct gaattatctt gcggcaacct atacaaccgg gtttttgtcg
    17641 gtagatttga aaacggtttc acaacaggca tactccgata tggcggataa aataaatatc
    17701 ggggccgatt ctgcttctga tagtgaaatg atgaaaaaag cggaaaaaat cacgacacca
    17761 tcccaatccc agtcgcgcgg ccttctgcaa agactgatga aaaaactgtt gggcagctaa
    17821 gaggcggaga gatgagagaa aataaaatta ttttcacagg acctgtcggc gtagggaaaa
    17881 ccactgccat tgcggctatt tcggacgaag cactcgtcca gaccgatgct tccgcatccg
    17941 acatgacttt ggataggaaa aggaatacga cagtggcgat ggactacggg ccatcagctt
    18001 ggatgaggat accaaagtcc atttatatag tacgcccggt caggaacggt tcaactttat
    18061 gtgggaaatc ttaagccaag gcagtatggg tttggtattg cttttagata atgcccgaac
    18121 caacccgttg aaagatttgg aattcttttt acattcgttt cgagggctgc tggagaaggc
    18181 atccgtcgtt gtcggtatta ccaagatgga tatacgctct cagcccggta tcgacgtgta
    18241 tcacaaatat cttgcaaaac ataatcttaa tgttccggtt tttgaaattg atgcccgtaa
    18301 ggaagatgac gtaaaacaat tggttagcgc aatgttattt tctattgatc cgggactgga
    18361 ggtttaatat ggaatcaaca ctttcactac aagcgaattt atatccctgc ctgactcctg
    18421 ccggtgcatt ttatgccgta tccagcgatg cccccagtgc cggtaaaact ttgttgcgca
    18481 gcctgttgaa agcggatgcg gacgaagtgg tcagcagtga gaagctgctc gcgggcggac
    18541 accgccgaca tcgataccgc tttgaacctg ttgtaccgtt tgcaaaaact cgaattcctc
    18601 tatggcgatg aaaacggtca ttcagacggc atcaatttgt cggacgagca attgccgttg
    18661 ctgatggaac aattgtccgg cagcggtaag gcattattgg tcgatcggaa cggtctgtat
    18721 cttgccaacg ccaatttcca tcatgagtcg gcggaagagt tggggttgtt ggcggcagaa
    18781 gtcgcacaga tggaaaagaa ataccggctg ctgattagga acaacctgta tatcaacaat
    18841 aacgcttggg gcgtttgcga tccttccggt cagagcgaat tgacattttt cccattgtat
    18901 atcggttcaa ccaaatttat tttggttatc gccggcattc ccgatttgag caaagaggca
    18961 tttgttactt tggtaaggat tttataccgc cgttacagca accgcgtgta aaacttggga
    19021 caggagggat tatgcagcaa ttattgattt caatccttga agatttaaat aatacatcta
    19081 cggatattat cgcgtctgcc gttatctcaa ccgacggatt gccgatggcg acaatgcttc
    19141 cttcacattt gaattcggac agggtagggg cgatttctgc cactttgctt gctttgggga
    19201 gtcgctcggt gcaggaactc gcctgcgggg aattggaaca agtgatgatt aaaggaaaat
    19261 caggctatat ccttttaagt caggcgggta aagatgccgt gttggtgctg gtggcaaaag
    19321 aaaccggcag acttggttta atcctattgg atgccaaacg tgcggcaagg catattgcgg
    19381 aagccatata acatataaag attgcgggct tgcagataag tgcaatcgat tgtcaattta
    19441 tattgacacg ttcggtattt ctgttttatt attcgcgttt actccccgat agctcagtcg
    19501 gtagagcgac ggactgttaa tccgcaggtc cctggttcga gcccaggtcg gggagccaaa
    19561 ttccaaaacc ctctaagtat tttcttagag ggttttgttt taccggcggt cagaaacgca
    19621 tttttgagat gattgttttg agatggaata aaatctttgc aaaattcctt tcgtgatggt
    19681 tatgaaaaat aaatttctaa agatttaatt ggttattttt ataattttga aatttatcgg
    19741 ttttgtaaag gtctcgggat aagcaatttc ggtcttcggc gcgtctttta cgccaaaccc
    19801 ataagaattt tgagggtaat cttcatcgtt ttgcctgaat tgccgacgca aagcgattta
    19861 tcggcggttg tgtttgagcg tttgattgca gcttgcccaa tctcaaatat ttctaaatac
    19921 caattgaaat tcaatatttt ataaaaacac tgatttggaa cgaacagatt tataaaaatt
    19981 ccgtgtatcc ttgagtaagg gagttgattg aaaagacttg tttgattgat gatgaagaat
    20041 aagttaatta atgtcttatt tggtattcgt tctattcata ttttttccca gttccttcac
    20101 taaaaaatcc aaaaatacgc gtaagcggag gttgacggct ttatcgctgt aataaacagc
    20161 attaaagggg tgtgttttat tggaggtttg ttcggcgaat aggggaatta actttccttc
    20221 agtgatgtcg ttgtcaacca aaaaatctga taagcaagca ataccgcaac ttgaaaggca
    20281 caacgagcgt aagatttcac cgctgctggc ggtaaagtgc ggtgaaattt tatagggatt
    20341 tccctgcgca tctaaaaccg cccatgtatt tagagaaccg ggttctgtga agcctaaaca
    20401 ttgatggttg gcaagatctt ctgcagattg tggcgtgccg tgttttgcta aatattcagg
    20461 actggcgact acgcggaagt ggctgtcaaa cagatggcgt gcacgcagcc cggaatcgtc
    20521 caattctccg gcccgtaagg caatatcgac tttgcgttca atcagattga tatagccttc
    20581 ggaagaaacg agcgaaagtc ggatatgcgg atagcgttcg ttgaattttg ctgccagcgg
    20641 cgccagcaga tgcagcacca tcggcatcgc ggaatccacg cgcaacacgc cttgcggtac
    20701 ttcgtgcact gccagcattt cggtttccgc cgctgccatt tcttgcagga ttctctgcgc
    20761 gcggcggaaa tattgcgcgc cttcttccgt cagattgagt tgccgcgtgg tgcggttgag
    20821 caggttcacg cccaactttt cctccagccg tttgacgatg cggcttacgg cagaatttgc
    20881 catctccaac tgctccgccg cacggctgaa gctgccgctt tccaccactt gaacaaatac
    20941 ggtcagttct tctgaattgg ttttcatcgt gtttcctttt cggttggaac cccacccttt
    21001 agggcggcag gatcagactt tatttgggaa gggcgtaacc cattcccaat caggacggca
    21061 catagggaga cgatttatgt gtcatcccgt gtgttgaaac atctgattat tccatttgac
    21121 gcaaaagtgt tttcttattt ttgcactttt aaatcataaa gtaaaacggt acaatacatt
    21181 catcaattca caaacgaggt aacaaatgaa tattttatta ttagacggcg gcaaagcgtt
    21241 cggacattct cacggcgggt taaaccacac gcttcacaaa aaagcgaaag aagttttgac
    21301 cgcgctcgga cacaatgttt aagaaaccgt gattgatgcc ggctatgatg ttgaggcgga
    21361 aatcgaaaaa ttcgtttgga tggatgctgt gatttggcag atgccgggct ggtggatgca
    21421 cgagccttgg acagtgaaaa aatatatgga cgaagtcttt accggcggac acggcaaact
    21481 ctaccaaagc gacggcagac accgcgtcaa tccgactgag ggctacggca caggcggctt
    21541 gttgcaaggc aaaaaacata tgctttcact gacttggaat gcgccgattg aagcctttac
    21601 ccgcgaaggc gatttctttg aaggcaaagg cgttgatgtt ttgtatatgc acttccacaa
    21661 agccaacgag ttcatcggct tgagccgcct gccgacattc ttatgtaacg atgtggttaa
    21721 aaatccgcaa gtggaaaaat acttggcaga ttatcaggca cacttggaaa aagtgttcgg
    21781 ctaattaaaa atccatcttc aacacggaga tggattttgt ttgtttcgtt gattttgtgt
    21841 cagtttcaga tgtgggtgct tatccggacg ggtcgtctga aaatgtttgc cccaatgcaa
    21901 aaaaatcact gcaaaccttc acaaacgggg ctggtagtga ttttttcaaa tcaaacagat
    21961 tgaaaacctg cgccgaattg ttcagacggc attatttttt caattccgcc aaaatcccgt
    22021 caacggtttt cttcgcgtcg ccgaaacaca tcacgctgtt ttcgttgaag aacagcgggt
    22081 tttgtacgcc tgcgtagccg gtgttcatcg agcgtttgaa tacgacgact tcttttgcct
    22141 tccatacttc taaaaccggc atacctgcaa tcgggctgtt cggatcggtt tgggcggcag
    22201 ggttgacggt atcgttcgca ccaatcacca agaccacatc ggtttcgggg aagtcgtcgt
    22261 tgatttcgtc catttccaaa acaatgtcgt aggggacttt ggcttcggcg agcagtacat
    22321 tcatatgacc gggcaggcgg ccggcgacgg ggtggatgcc gaagcgtact tcgatgccgt
    22381 ttttacgcaa aagctcggtg atttcggcaa cggggtattg tgcctgcgcc actgccatgc
    22441 cgtagcccgg ggtgataatg acgctgcttg cgcctttcag catttcggca acatcggcag
    22501 ctttgacttc tcggtattcc tctatctctt ggctgccgga agacgatatg ccgctgtcgc
    22561 tgccgaaacc gccggcaatc acggaaacaa acgaccgatt catggctttg cacataatgt
    22621 aggacagaat tgcgccgctt gagccgacca gcgcgccggt aacgatgagc aggtcgttgg
    22681 agagcataaa gcctgccgct gcggccgccc agccggagta ggagttgagc atagatacga
    22741 ccacgggcat atccgcgccg ccgatggagg caaccaagtg ccagccgaat gcgagggcga
    22801 tcagggtcat aatcagaagg atgaagccgc tgccgtcaat gccgacaaat acgagcagca
    22861 acacaaacga tacggcgagc gccagtgcgt tgagcttgtg tttggcgggc agttgcagcg
    22921 ggctgctgct gattttgccg ttgagtttgc cgaatgcggc cagtgagccg gtaaaggtta
    22981 ccgcgccgat gaaaatgccc aaatagactt cgaccagatg gatggtgtgc atatcgtgcg
    23041 aaacgttgcc cggctcgatg tagctgttga agccgaccaa aacggctgcc aagccgacga
    23101 agctgtgcag aagtgcaatc agttcgggca tttcggtcat ttctactttt ttggctttgt
    23161 ggatgccgat tgccgcgccg atgagcatgg cgatgataat ccagcccagt ccgtgggtat
    23221 tgtcggaaaa gaccgttacg aagagggcga ccgccatacc ggcgataccg gaatagcagc
    23281 cccgtttggc ggtttcctgt ttggacagcc ccgccagtga gaagatgaat aaaattgcgg
    23341 caacgatata cgccgctgtt acgagtcctg aagacatgga aattctccga ttttcgatga
    23401 tttgttttca atgccgtctg aaaaattgac gttcgtgttt tcagacggca tctgtttcaa
    23461 gcagccgcga caaacagtcc gacggtgcag gcaaatccgc ccgcccacat cagcgagcgc
    23521 aatgctgctt tgtctgcgat gtagcaccag ataaaggcga ggcggaacag gatgaacaat
    23581 ccggcaagcg tgttgacggt tgcttgtccg gcattgccgg ttgcgtgtgc cgtcaaaacg
    23641 gcggcggcaa acggtgcaaa ggcttcaaaa ccgttttgct gcgcggcgtg ggcacgggcg
    23701 gctgcgcctt gcgtatgtgc cagaaaaccg cgaggattgt ggttgtcttt aaaccggaat
    23761 ccgcctgctt ttttggcata cgccgcacaa aaaagcggca ataggcaggc aatcagaatg
    23821 caccaatagg cgaaagtcat ggcttaccct ttcttaaaca tattcagcat acgccgtgta
    23881 accgcaaagc cgccgaagat attgatgccg gcaatcagga tggcaacaaa cgacagcagc
    23941 gaaacgaagc cgttgccctg accgatttgc agcagcgcgc cgacgacgat gatgccggag
    24001 atggcgttgg ttaccgacat cagcggtgtg tgcagcgagt ggctgacgtt ccaaacgaca
    24061 tggtagccga tgacgcaggc gaggacgaag acgataaagt ggttcaagaa tgctgcgggt
    24121 gcgaccgcgc cgacccacag caccaatacg gcggcgatgg cggcgggcgc gagttttttc
    24181 cacaggggaa caggtttcgg ctcgggcttg gcggcaggcg cggctttttc agacggcgtt
    24241 tgctgcggcc gggcggaaac ctgaatcggc ggaggcggga aggtgatttc gccgtcgcgg
    24301 gtaacggtca tattgcggat aatcacgtct tcgaagtcca gcgtgatttc gccgtctttg
    24361 ttcgggctta acagcttggt caggttcacc aagttggtgg cgtaaagctg ggaagactgt
    24421 ccggcaaggc ggtttgccat gtcggtgtag ccgatgattt tcacgccgtt gccggttacg
    24481 gacaattcgc ccggtcgggt gagttcgcag ttgccgcccg tcgccgccaa atcgacgatg
    24541 acggatccgg atttcatgct ttccaccatt tctttggtaa tcagcttggg agcgggtttg
    24601 cccggaatgg cggcggtggt gatgatgatg tccacttctt tcgcctgttc ggcaaagagc
    24661 ttcatttcgg cggcgataaa ttcgtcgctc atcactttgg cgtagccgtc tccgccgccg
    24721 cccgattctt gcaggaagtc gagtttcagg aacttaccgc ccatcgattc gatttgttcc
    24781 gccacttcca agcgggtatc gaacgcgcgc accactgcgc cgagcgaatt tgccgtaccg
    24841 attgccgcca aacccgccac acctgcacca atcaccaaaa cctgcgcagg cggcactttg
    24901 ccggcggcag tgatttgacc ggtgaagaaa cggccgaagg cgttggcggc ttcaatcacg
    24961 gcgcggtagc cgctgatgtt tgccattgaa gacaaagcgt ccaaggcctg agcgcgggaa
    25021 atgcggggaa ccatgtccat cgccagcgcg ttgactttct tggcgcgcaa ggcctcgacc
    25081 aaagcctcgt tttggcgcgg ccacaggaag ctgacgatgg tttgaccttc tttgagcagc
    25141 ggcagctcgc cttcggacgg cgcgttgacc ttataaatta aagggcaggc ccaaaccgcc
    25201 gctttgtcgg caacggttgc gcctgctgtt tggtaagcgg catcgtccaa acttgccgcc
    25261 aaacctgcac cgctttcgac aacggtttca aagcctagtt tgcccagcag ggcaacggtg
    25321 gcgggcgtgc aggcgacgcg ggtttcgccg gataatgact cgcgtgggat accgattttc
    25381 atctctgaat cctttttcgg gttgttcata tgtatcgtgg gttaaattta aatcggtgca
    25441 gggcggagca acgccgtacc ggtttaaaac cgattcactt caaatgttaa tatattttag
    25501 ataatcccct tataacgaat tttcatcagg ctggcaatag ttgcgcattt tcccgtgttg
    25561 tccgacacat actgccgttt gcgtttgaag tcgttttccg attgcaggca cgcccgccgt
    25621 aacattcttt gccgtttcac tatataatcc gcattttttg agccgccgtt atgccgcaag
    25681 ccctcgtcct ccaatttccc tccgccgaag ccctgccttc cgacttcccc tcacgcctgc
    25741 ccgaacctga ttatgctgat gaaaagcgta tgcgttttat tgttgaagaa ggattttctt
    25801 taagcgaaaa agacgcggcg ttactggaca gccgtcaaat cgaccacgcc gttttgccca
    25861 atatggcgtt tggcgaactc gggctgattg tcagcgatat ggattcgacg ctgattacca
    25921 tcgaatgtat cgatgaaatt gcggcaggtg tgggtttgaa aggcaaagta gcggaaatta
    25981 ccgagcgcgc catgcgcgga gagttggatt tcgaacagtc tttacgcagc cgcgttgcgt
    26041 tgttggcggg attggacgaa cagattttgg cggacattta tgaaaacgtt ttgaagctct
    26101 cgcccggtgc ggaatttttg ttggacgaat gcaaaaggca caatgtgaaa ttcctgctgg
    26161 tgtccggcgg gttcacgttt tttaccgaaa ggctgcaaca acggctcggc ttcgaatacc
    26221 aacacgccaa tattttggaa attgaaaacg gcaggttgac cggccgtctg aaaggcagaa
    26281 tcatcgacgc gcaggcaaag gcggatttat tgcgcgaata ccgcagccgc ctcggattgc
    26341 agccgcatca ggtgttggcg atgggcgacg gtgcgaacga tattccgata ctcaaagaag
    26401 cgggcatagg cgtggcttac cgcgccaaac cgaaagcgcg ggccgccgcc gatgcctgta
    26461 tcaacttcgg cggtttggag cgtgtacgcg gcctgttcgg ataggcggat aggaaacgga
    26521 tgccgtctga aaggttttca gacggcattt gaacggcagg aacgacagtg ggacgcagaa
    26581 aactttggtt tgccctggcg gcagcaggcg ttatcggcgg tttggtcggc attgtgctga
    26641 cggaactgat gcacttcata cggcatacgg catacggtta tgacgcggac ggtgcgtaca
    26701 tctcgttccg cgaaggtgtg gcacaggctt tcggtatgcg gcgcgttgcc atgctgacgc
    26761 tgtgcggcgc gatcgcaggc ggcggctggt ggctgctcaa acgtttcggc aagccgcaaa
    26821 tcgaaatcaa agccgccttg aagcagccgt tgcaggggct gccgtttctg acgacggttt
    26881 tccatgttct gctgcaaatc ataacggtcg gactcggttc gccgctcgga cgcgaagtcg
    26941 ccccgcgtga aatgactgcc gcgtttgctt ttgccggcgg caggcggttg ggtttggacg
    27001 aaggcgaaat gcgcctcttg attgcctgtg cgtccggagc gggtttggcg gcggtgtata
    27061 acgtgccgct cgcctccacg ctgtttatcc tcgaagcgat gttgggcgtg tggacgcagc
    27121 aggcggttgc cgccgcattg ctgacttccg tcatcgccac cgccgtcgcg cgcatcggct
    27181 taggcgacgt gcagcagtat catcccgcca accttgccgt aaatacttca ttgctttggt
    27241 tttccgccgt catcggcccg atacttggcg caaccgccgt ctttttccgg cgcaccgccc
    27301 aaaaattccc cttcatcaag cgcgacaata tcaaaatcat tcccttggcc gtctgtatgt
    27361 ttgtactcat cggtgtgatt gccgtttggt ttcccgaaat tttgggcaac ggcaaagcag
    27421 gcaaccaact gacttttggc ggtttgaccg gctggcaata cagccttgag ttgaccgctg
    27481 tcaaatgggc ggtcgttttg atggcgctgg cggcaggcgc atacggcgga ctgattacgc
    27541 cgtctatggt gctcggcagc accatttctt ttgcagccgc cgccgcgtgg aacagcgtct
    27601 tccccgaaat gccgtctgaa agcgcggcag tcgtcggagc ggcggtgttt ctcggcgtat
    27661 cgctcaaaat gccgctgacc gccattgtgt tcgtattgga actgacctac gcgccgctgt
    27721 ccctgctgct gcctttgtgc atcggcatgg cgggggcatt gggaacatcg ggaaaaatgg
    27781 gcttcaaatg aatgccgaca aatgccgtct gaaaggtttc cagacggcat ttctttgcaa
    27841 attgtcaaca atatctgcaa aaacctactg ccaaaaaact gaaaatagcg gataataccg
    27901 ccccgaaaaa gatccccttt caccatccaa ccgtcagaaa aggaagcccc aatgtccgtc
    27961 atcaaacgcg ccctgatcag cctgtgcgac aaggcaggcg cggtcgaatt tgcccaaacc
    28021 ctgcacaagc tcggtgtcga aatcctctcc accggcggca cggcgaagct gcttgccggt
    28081 gcgggcgttc ccgtgattga agtcgccgac tacaccggtt ttcccgaaat gctcgacggc
    28141 cgcgtgaaaa ccctgcatcc gaaaatccac ggcggtattt tgggccggcg cgatttggac
    28201 gaacacgtcg ccaagatgga agagcacggc atcggcaaca tcgaccttgt gtgtgtcaat
    28261 ctttacccct tcgccgccac catcgccaag cccggctgca cactggaaga cgcaattgaa
    28321 aacatcgaca tcggcggccc ggccatggtg cgttccgccg cgaaaaactg gaaacacgtc
    28381 gccatcgtta ccgataccgc cgacttcccc gccattgccg ccgaactcga agccggcaac
    28441 ggcgcgttga gcgataaaac ccgcttcaac ctctcacgca aagcgttcag ccacaccgcc
    28501 gaatacgacg gcatgatttc caactattta acctcgcttt cagacggtgt tttgagcgga
    28561 gagcctgaaa tcggcgaatt tccgagccgg ttcaaccaaa gctggattaa agtgcaagat
    28621 atgcgctacg gcgaaaaccc tcaccaacgc gccgcgttct accgcgatat tcatcctgcg
    28681 gcaggcagcc tttccgccta caatcaactg caaggcaaag aattgtctta caacaacatc
    28741 gccgatgccg atgccgcttg ggaagccgtc aaatccttcg acgcgcccgc ctgcgtgatc
    28801 gtgaaacacg ccaatccgtg cggcgtagcc gttgcagccg ataccttggc cgcctacaaa
    28861 ctcgcctacg ccaccgacac caccagcgcg ttcggcggca tcatcgcctt caaccgcgaa
    28921 gtcgacggcg aaaccgtcaa acagattacc gacaaccaat ttatggaagt cctcatggcg
    28981 ccgaagttta ccgccgaagc ccttgaaatc gccgccgcca agaaaaacgt gcgcgtattg
    29041 gaagtgccgc tcaaagcagg tgccaaccgc tttgaactca aacgcgtcgg cggcggactg
    29101 ttggtacaaa cgcccgacat caaccgcatc aaccgcgccg atttgaaagt cgtctccaaa
    29161 cgccaaccga ccgagcagga atggaacgat ttgctgtttg tctggaacgt cgcaaaatac
    29221 gtcaaatcca acgccatcgt cttcggcaaa ggcggccaaa cctacggtat cggcgcaggc
    29281 caaatgagcc gcgtggacag cacccgcatc gccgcccgca aagcgcaaga tgccggtctc
    29341 gacctcaacg gcgcatgtgc cgcttccgat gccttcttcc cattccgcga cggcgtggac
    29401 gtgattgccg aacagggcat caaagccatc atccatccgg caggctcgat gcgcgatcag
    29461 gaagttttcg acgcggcgga cgaacacggc atcgccatgg cggtaaccgg catccgccac
    29521 ttccgccatt aaggcagacg aacaaggcaa tgccgtctga agggttttca gacggcattt
    29581 ttgcgctatt taccgtaatc ctgaaatccc gtcattccca cgcaggcagg aatctagatg
    29641 agaatccatc ctgtcagaaa tacccgaatc gtcaggaata cccgtgtcat cattcccgat
    29701 acaccgtaat cctgaaaccc gtcattcccg cgcagacaga aatccggatt tgtccgcgcg
    29761 gaaacttatg cgccgccatt cccgcgaagg cgggaatccg gaccgttcgg tttcggttat
    29821 ttccgataaa ttcctgctgc ttttcattcc tagattccca ctttcgcggg aatgacgaag
    29881 gagtgggaat ccggtttttg agttccggcc atttccgaca aattgctttg gcattggata
    29941 tttcctattt taatccacta tagtggatta actttaaacc agtacggcgt tgcctcgcct
    30001 tagctcaaag agaacgattc cctaaggtgc tgaagcac
//
LOCUS       DAWXHA010000010        28126 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.010, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000010 DAWXHA010000000
VERSION     DAWXHA010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28126
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.010"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(155..2017)
                     /gene="hscA"
                     /locus_tag="AABD07_000370"
     CDS             complement(155..2017)
                     /gene="hscA"
                     /locus_tag="AABD07_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HFB2354968.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDADGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRFIELHTRQGVKTPVEVSAEILKTLKLRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNRLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATFSDGMAIDTSISRAEFHNLTQHLVMKTFEPVKQALKDAGVGKNEVK
                     GVVMVGGSTRMPHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDDTITQMLKDSMGNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAEEFAQI
                     QRDIADLQGRLKDGKAEDIRAAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            2188..3060
                     /gene="hpnD"
                     /locus_tag="AABD07_000371"
     CDS             2188..3060
                     /gene="hpnD"
                     /locus_tag="AABD07_000371"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="HpnD is found regularly in a locus responsible for
                     the biosynthesis of squalene from farnesyl diphosphate,
                     and is now recognized to function as a presqualene
                     diphosphate synthase (EC 2.5.1.103); Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HFB2354969.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKQDAVTVLYVFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDNAFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCRRVAGVVGCLIARILGFSDGKTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            3135..4448
                     /locus_tag="AABD07_000372"
     CDS             3135..4448
                     /locus_tag="AABD07_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HFB2354970.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNTLPDGKVLVNGEAFDAAILATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGIADGTAQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFANRAWADKAHADLRRILPHLGEPEAVRVITEKRATTATDAPPPDL
                     SWLHRHRIFPAGDYLHPHYPATLEAAVQSGFASAEACLQSLNDAV"
     gene            4530..5249
                     /locus_tag="AABD07_000373"
     CDS             4530..5249
                     /locus_tag="AABD07_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFB2354971.1"
                     /translation="MPTLTDKTILVTGASQGLGEQVAKAYAAEGATVILVARHQKKLE
                     KAYDAIVEAGHPEPFAIRFDLMSAEEKEFERFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAGSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            5415..6086
                     /locus_tag="AABD07_000374"
     CDS             5415..6086
                     /locus_tag="AABD07_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354972.1"
                     /translation="MKTVSAAIAFAAAAVSLTGCATESSRSLEVAKVASCNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDSEDRLGSQAKTILVTHLQQTNRFNVLNRTNLSALKQE
                     SGISGKAQNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQTAYAKVALNIVNVN
                     TSEIVYSTQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVDNLVQAVDNGA
                     WQSNR"
     gene            6096..6463
                     /locus_tag="AABD07_000375"
                     /pseudo
     CDS             6096..6463
                     /locus_tag="AABD07_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
     gene            6460..7107
                     /locus_tag="AABD07_000376"
     CDS             6460..7107
                     /locus_tag="AABD07_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFB2354973.1"
                     /translation="MKPLILGLAAVLALSACQVRKAPDLDYTSFKESKPASILVVPPL
                     NESPDVNGTWGMLASTAAPISEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSRNGILKGPRFVEEQPK"
     gene            7611..8681
                     /locus_tag="AABD07_000377"
                     /pseudo
     CDS             7611..8681
                     /locus_tag="AABD07_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236971.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            8718..9266
                     /locus_tag="AABD07_000378"
                     /pseudo
     CDS             8718..9266
                     /locus_tag="AABD07_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225253.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            9370..10038
                     /locus_tag="AABD07_000379"
     CDS             9370..10038
                     /locus_tag="AABD07_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HFB2354974.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLQHKHDPFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     NMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            10035..10703
                     /locus_tag="AABD07_000380"
     CDS             10035..10703
                     /locus_tag="AABD07_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFB2354975.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKLHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCRLFGIANMIGTQLETGPDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVSEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            10708..10995
                     /locus_tag="AABD07_000381"
     CDS             10708..10995
                     /locus_tag="AABD07_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-activating enzyme"
                     /protein_id="HFB2354976.1"
                     /translation="MPSEARFGVQTALRLKSQKPKATGIHPEKQKTQEFIGKNNNLST
                     VIPTKVGILIRPHGNLYFVIPPIPHHPYRFKSAQKSTSRHSHESGNLGRKI"
     gene            complement(11293..12189)
                     /gene="argB"
                     /locus_tag="AABD07_000382"
     CDS             complement(11293..12189)
                     /gene="argB"
                     /locus_tag="AABD07_000382"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HFB2354977.1"
                     /translation="MEFENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKETMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLVDTPEQNSVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDGLIADGTLYGGMLPKIASAVEAAANGVKATHIIDGRLPNA
                     LLLEIFTDAGIGSMILGRGEDA"
     gene            12359..13489
                     /locus_tag="AABD07_000383"
     CDS             12359..13489
                     /locus_tag="AABD07_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HFB2354978.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDMKI
                     WITARQHPGETMAEWFVEGLLGRLLDSQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVRGKMLETGVDLFLDIHGDEGLPFVFVAGTEGV
                     PNYNPRISALEAQFKTALLNASPDFQDEYGYEKDAPGKANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAVLSAILNVAGDLR"
     gene            13563..14414
                     /locus_tag="AABD07_000384"
     CDS             13563..14414
                     /locus_tag="AABD07_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HFB2354979.1"
                     /translation="MIIHHQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFSRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRITDINAFWA
                     MGFPQAHYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKP
                     RPTGQTAALFLGGYGVFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(14499..15164)
                     /locus_tag="AABD07_000385"
     CDS             complement(14499..15164)
                     /locus_tag="AABD07_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HFB2354980.1"
                     /translation="MMDSRKFTEASKRRLGELLDAKSEQGNTMRCDEVQGFMTALLSG
                     PDKLAPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYDDGE
                     GGSDFYTWCNAYLYGLDIVPTDWFEAADDEAFEELFYPVMALGGIYDEEENGAIRLQF
                     TEGELAELASELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACC
                     GKN"
     gene            complement(15360..17153)
                     /locus_tag="AABD07_000386"
     CDS             complement(15360..17153)
                     /locus_tag="AABD07_000386"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003778014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HFB2354981.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKRHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGADIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGKAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSQIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWSANRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGNMNAESYKFISQKISTETGEEPRADIVFGIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVANGQGADTD
                     ILAATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            17399..18508
                     /gene="proB"
                     /locus_tag="AABD07_000387"
     CDS             17399..18508
                     /gene="proB"
                     /locus_tag="AABD07_000387"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HFB2354982.1"
                     /translation="MKYKRIVFKVGTSSITRSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIAAESGVPVYICSSLKPDSLAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     SVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            18521..19783
                     /locus_tag="AABD07_000388"
     CDS             18521..19783
                     /locus_tag="AABD07_000388"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HFB2354983.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADAEEKNRALLAMADSLEAAAEDI
                     LAANRLDLKAAAGKIPDSMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPEAVQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTGRPSVCNSMEVLLVHEGIAADFLPKLER
                     LLVRGRIEAGLPPVRFRLDPQAARYIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIEARGTHHSDGIVTENRHAADYFTTHIDSAAVYINASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPIGLKELTSYKYIVQGTGQVRE"
     gene            complement(19959..23003)
                     /locus_tag="AABD07_000389"
     CDS             complement(19959..23003)
                     /locus_tag="AABD07_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HFB2354984.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPEFSLMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMQSESKTSPVRPVFKEITLEEATRALSSAALRETKKRYIDAFEKNGTAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQEKGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSAEA
                     RISRLIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIHIEEPAAPDA
                     WVVEPPEVPEVAVPEIDILPPPPVSEIYNRTYEPPAGFEQAQRSRIAETDHLAADVLN
                     GGWQEETAAIADDGSEGAAERSSGQYLSETEAFGHDSQAVCPFEDVPSERPSCRVSDT
                     EADEGAFQSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVK
                     VKVVDSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGL
                     ELPNPKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTG
                     SGKSVGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGITHLLAPVVTDMKLAANA
                     LNWCVNEMEKRYRLMSFMGVRNLAGFNQKTAEAAARGEKIGNPFSLTPDDPEPLEKLP
                     FIVVVVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANI
                     PTRIAFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRV
                     VEYLKQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGV
                     QRALRIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            23168..23848
                     /locus_tag="AABD07_000390"
     CDS             23168..23848
                     /locus_tag="AABD07_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354985.1"
                     /translation="MIFQTVWFSDVVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASVGGGQLAQMNYHLLAVNLVTLMVDTSAALWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     IGILDAANAFPSEILWTAALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSERGIWL"
     gene            23877..24236
                     /locus_tag="AABD07_000391"
     CDS             23877..24236
                     /locus_tag="AABD07_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome condensation protein CrcB"
                     /protein_id="HFB2354986.1"
                     /translation="MLSNILPLSIGAIFGTTARWLLNLAVPASLSPATGNLFANWTGA
                     LLIGIFAETVSHPQWKLLLITGFFGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGTAVK"
     gene            complement(24841..25377)
                     /locus_tag="AABD07_000392"
     CDS             complement(24841..25377)
                     /locus_tag="AABD07_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HFB2354987.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLSNDEDEITETVLMSKDEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(25411..25767)
                     /gene="folB"
                     /locus_tag="AABD07_000393"
     CDS             complement(25411..25767)
                     /gene="folB"
                     /locus_tag="AABD07_000393"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HFB2354988.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVHVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            25823..26425
                     /gene="plsY"
                     /locus_tag="AABD07_000394"
     CDS             25823..26425
                     /gene="plsY"
                     /locus_tag="AABD07_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HFB2354989.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALVATTAAPLAALFF
                     MPHPSWIFATLAIAILVLLRHKSNILNLIKGKEGKIGEKR"
     gene            26517..27362
                     /locus_tag="AABD07_000395"
     CDS             26517..27362
                     /locus_tag="AABD07_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HFB2354990.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGLYNLEGSEAQKVGEYRQGIALLRQAQNLPAELSDFAAHIQKILPSPELYCGSPWLA
                     QSLIRIGDKLRLFELHPADFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     AVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLYAELHVHAPKTDGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            complement(27470..27802)
                     /locus_tag="AABD07_000396"
     CDS             complement(27470..27802)
                     /locus_tag="AABD07_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354991.1"
                     /translation="MKNLKNISVVAVCAVLLAACASENSVANYAIGDDSAVIKAGRNR
                     AEARISRAELAQHRRQRKNVSEELALEREKRANKHDAIRQGMGTAAGGLMLLNGVVGT
                     VGVMKSVF"
     gene            complement(27852..28100)
                     /locus_tag="AABD07_000397"
     CDS             complement(27852..28100)
                     /locus_tag="AABD07_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2354992.1"
                     /translation="MKMKKLILLSVAAMLVTACTYADRRFVTQESAAEIQAKSRAIQI
                     SERAERAEYRKERREEMMDAARAIKKANENSPNIYFIR"
BASE COUNT         6393 a         8211 c         7136 g         6386 t
ORIGIN      
        1 gtaccggttt aaatttaatt cactatacac gcccttgatg acggttttca tcgaatagac
       61 aatgcctgac ttttccatat cgatgttttt caagtgtttt cgatccttca gacggcatca
      121 ggttatatct atgccgtctg aaaccgttta agtatcaaat attatcgaca ctctgacctg
      181 tcagcgcacg ttggatgttg cggttcatgc gcttggcggc gaaattgtcg gtgctgcggc
      241 tgagtttggc gacagctgca cggatgtctt cagctttacc gtctttcaga cggccttgca
      301 aatcggcgat gtctcgctgg atttgtgcaa actcttcggc atccagcaaa tcgctgtcca
      361 actcgagggc ggcgttgacg gcatcggtca ggctttcggc ttcgaccacg gcttcggcgc
      421 gggcgcgtgc cgccatatct tcggcggcgt tgcccatgct gtctttgagc atttgggtga
      481 tggtgtcatc gtccaaaccg taggagggtt tgacttcgat ttgcgcctgt acgccggtgc
      541 tttgttcttg ggcggaaacg gacagcaaac cgtcggcatc gatttggaag gtaacgcgga
      601 tacgcgccgc acccgccgcc ataggcggaa tgccgcgcag ggtaaatttg gcaaggctgc
      661 ggcagtcgga aacgagctcg cgttcgcctt gcacgacgtg tatcgtcatc gcggtctgac
      721 cgtctttgaa ggtggtaaag tcctgcgcgc gcgcggtggg gatggtggaa ttgcgcggga
      781 tgattttttc cgccaagccg ccgtaggttt ccaaaccgag cgacaagggg gtaacgtcca
      841 acagcagcca ttcgccgtcg gctttgttgc ctgcgaggac gtttgcctgt atggctgcgc
      901 cgagcgcgac gacttcgtcg ggattgaggt tgttcagcgg ggtttgtccg aaaaaggtgg
      961 cgactgcctg ttggacgtgc ggcatacggg tcgaaccgcc gaccataacc acgcctttga
     1021 cttcgttttt accgacaccg gcatctttca acgcctgttt gaccggctcg aacgttttca
     1081 tcaccaaatg ctgcgtcagg ttgtggaact cggcgcgact gatgcttgtg tcgattgcca
     1141 taccgtctga aaacgtcgcc tgaatgcgcg cttcggtttg cgtggtcaat tgttctttgg
     1201 cggcgcggac gagcgagagc aggagttggc tgtcttgttc gttgagttgg gagagtctgt
     1261 tttgttcgag caggtagcag aacaaacgat ggtcgaagtc atcgccgccc aacgcgctgt
     1321 tgccgccggt ggctttgact tcaaacagtc ctttggtcag ttgcaacacg gatacgtcga
     1381 atgtgccgcc gcccaaatcg tacacgacaa acgtgccttc cgaggcgttg tccagcccgt
     1441 aggcgattgc ggcggcggta ggttcgttga gcaggcgcaa tacgttcaaa ccggccagac
     1501 gcgcggcatc tttggtggcc tggcgttgcg cgtcgtcgaa ataggcgggg acggtaatca
     1561 ccacgccgac caaatcgccg cccaaggttt cttcggcacg caatttgagg gttttgagga
     1621 tttccgccga cacttcgaca ggcgttttca ccccctgccg cgtatgcagt tcgataaagc
     1681 gttgattgtc gccgaaacgg taaggcaggt aatgcgtatt ttgatgcaga tcggcaagag
     1741 tccgcccgat aaggcgtttg gcggagctga cggtgttcag cgggtcggtt ttttgggcgg
     1801 acagggcggt tttgccgact tcaatgccgc cgttttccag atagcggacg acggaaggca
     1861 gggtaacgcg cccgtcggca tcgggcaggc aggcggcact gccgctgcgg acggtggcga
     1921 ccaagctgtt ggtcgtaccc aaatcgatgc ctgccgccaa acggtgccgg tgcggggcgg
     1981 cggacatacc cggttctgaa atctgcaaaa gagccataaa ttttgcctgt cggtgcggtg
     2041 tgtaaaggaa ggaaggcggc attttaacag aatttgcgcc gatagttgag caaaccgcta
     2101 aggattgggc cgtgccgccg aaattgccct ctaccgccaa ataccgataa aatccgcctt
     2161 tcccgcccat cattaggaat ataaatcgtg aaaggactcg actattgccg ccaaaaagca
     2221 gaggaaagcc gctccagttt tttgtcgggc ttccgtttcc tgactcagga aaaacaggat
     2281 gcggtaacgg ttctgtatgt cttttgccgc gaattggacg atgtggttga cgaatgttcc
     2341 aaccccgatg ttgcacaggc aacattgaac tggtggcgcg gcgatttgga caatgcgttc
     2401 ggcggcgcga tgccggaaca ccccgtcaat caggccttgc ggcaggttaa ggaaaccttc
     2461 aagctgccga aatatgaact ggaagcctta atcgacggga tgcagatgga tttggttcag
     2521 gcgcgttacg gcagttttga ggaattgaaa ctgtattgcc gccgcgtcgc gggcgtggtc
     2581 ggctgcctga ttgcgcggat tttggggttt tcagacggca aaacgctgga atacgcggat
     2641 aaaatgggtc ttgcgctgca actgaccaac atcatccgcg atgtcggcga agatgcgcgc
     2701 aggggacgga tttacctgcc gatggaggaa atgcagcggt ttgacgtacc cgcaagcgtg
     2761 attttgcaat gcagcccgac gggcaatttt gccgaattga tggcgttcca aatcaaacgc
     2821 gcccgtgaaa cctaccgcga agccgtatcg ctgctgcctg atgccgataa aaaagcccaa
     2881 aaagtcggac tggttatggc ggcggtttat tacgcgctgt tgaacgaaat cgaccgagac
     2941 ggcgcgcaaa acgtcctcaa atacaaaatc gccctccctt cgccgcgcaa aaaacgcatt
     3001 gccctgaaaa cctggttatt cggattcaaa ccgcgccccg gcacgccgga acgggcataa
     3061 ggcgcatact gcccttcagg aaaacccaac ccccgccgcc ccgaaaaacg gggtttcaac
     3121 cattggagga ataaatgatg aacacgccgc atccgcgccc gaaaatcgcc gtcatcggcg
     3181 caggctgggc cggcttgtcc gccgccgtca ccttggcgcg gcacgccgac gttaccctgt
     3241 ttgaagccgg ccggcaggcg ggcggaaggg cgcgcacact ggccggaaat accgacggtt
     3301 tcggtttttt ggacaacggg cagcacattt tgctcggcgc ataccggggc gtgttgcgcc
     3361 tgatgaaaac catcggttca gacccccgtg ccgccttttt gcgcgtaccg ctgcactggc
     3421 atatgcacgg cggtttgcag ttccgcgccc tccccctgcc cgcgccgctg catattttgg
     3481 gcggcgtgct gcttgcccgg cgcgtaccgt ccgcattcaa agccaaactg cttgccgata
     3541 tgtccgattt gcagaagtcc gcacgcctcg gacagcccga cacgacagtt gcacaatggc
     3601 tgaaacagcg gaacgtgccg cgtgccgccg taatgcagtt ttggcagccc ttggtctggg
     3661 gcgcgctcaa cacgcctttg gaaaccgcaa gcctgcgcgt gttgtgcaac gttttgtccg
     3721 acggcgtgct gacgaaaaaa tccggcagcg actatctcct acccaaacag gatttgggcg
     3781 caatcgtcgc cgaacccgcc ttggcggagc ttcaacggct cggcgcggac atccgcctcg
     3841 aaacgcgcgt atgccgtctg aacaccctcc cggacggaaa agtcctcgtc aacggcgaag
     3901 ccttcgatgc cgccatactt gccaccgcgc cctaccacgc cgccgcgctc ctgcccgaag
     3961 gcacgcccga acacgttcag acggcatatc aaaaccttcg ctaccacgcc attaccaccg
     4021 tctatctgcg ctacgccgaa cccgtccgcc tgcccgcccc gctgaccggc attgccgacg
     4081 gcacggcaca atggctgctt tgccggggca ggctcggact gcccgaaaac gaagtctccg
     4141 ccgtcattag cgtttccgac cgcgtcggcg cgtttgcaaa ccgggcgtgg gcggacaaag
     4201 cccacgccga cctcagacgc atccttccgc atttgggcga acccgaagcc gtgcgcgtca
     4261 tcaccgaaaa acgcgccaca accgcaaccg atgccccgcc gccggatttg tcgtggctgc
     4321 accggcaccg tatcttcccc gccggcgact acctccaccc gcactacccc gccacgctcg
     4381 aagccgccgt acaatcaggt ttcgcgtcgg cggaagcctg cctgcaaagc ctgaacgatg
     4441 ccgtctgaaa acgccggccg gcatcgggac gctttacaag gtgcggcaaa acgctaaaat
     4501 acattaaccg tcaaacccaa aggacaacca tgccgacact gaccgacaaa accatcttag
     4561 ttaccggcgc atcgcaaggc ttgggcgaac aggtcgccaa agcctacgcc gccgaagggg
     4621 cgaccgtaat tctggtggca cgccatcaga aaaaactgga aaaagcctat gacgcgattg
     4681 tcgaagccgg acaccccgaa cccttcgcca tccgtttcga cctgatgagt gcggaagaaa
     4741 aagaattcga acggtttgcc gccaccattg ccgaagccac gcaaggcaaa ctggacggca
     4801 tcgtccactg cgccggctat ttttacgccc tctcgccgct ggatttccaa accgtcgccg
     4861 aatgggtcaa ccaataccgc atcaacaccg tcgccccgat ggggctgacc cgcgccctgt
     4921 tcccgctgct gaagcagtcg cccgacgcgt ccgtcatctt cgtcggcgaa agccacggcg
     4981 aaacacccaa agcctactgg ggcggcttcg gcgcgtccaa agccgcgttg aactacctgt
     5041 gcaaagtcgc cgccgacgaa tgggaacgct tcggcaacct gcgcgccaac gtcctcgtcc
     5101 ccggccccat caattccccg caacgcatca aatcccatcc gggcgaagcc ggaagcgaac
     5161 gcaaaagcta cggggacgta ctgcccgcat ttgtctggtg ggcaagtgcc gaaagcaaag
     5221 ggcggagcgg cgaaatcgtt tacctctaaa tccggaaaag gcaggcatcc cgcccgcgcc
     5281 gcgcttccgt tttgaaaaat atccgtacct tccgcgcgca tccgtcccgc acagacaaac
     5341 accttgactt aaatttacat aaggacaata atgataaccc gttatttccc taactggacc
     5401 ttagggtaaa ttttatgaaa accgtttccg ccgccatcgc ttttgccgcc gctgccgttt
     5461 cactgaccgg ctgtgcgacc gagtcctcac gcagcctcga ggttgcaaaa gtcgcctcct
     5521 gcaatacgca atatcacggt gttcgcaccc cgatttccgt cggaacattc gacaaccgct
     5581 ccagcttcca aaaaggcatt ttctccgaca gtgaagaccg tctgggcagc caggcaaaaa
     5641 ccatcctggt aacacacctg caacaaacca accgcttcaa cgtactgaac cgcaccaacc
     5701 ttagcgcatt gaaacaggaa tccggcattt ccggcaaagc gcagaacctg aaaggcgcag
     5761 attatgtcgt taccggcgat gtaaccgaat tcggacgcag agatgtcggc gatcatcagc
     5821 tcttcggcat tttgggtcgc ggcaaatcgc aaaccgccta tgcaaaagtg gctctgaata
     5881 tcgtcaacgt caatacttcc gaaatcgtct attccacaca gggcgcgggc gaatacgcac
     5941 tttccaaccg cgaaatcatc ggtttcggcg gcacttccgg ctacgatgcg actttgaacg
     6001 gcaaagtttt agacttggca atccgcgaag ccgtcgacaa cttggttcag gctgtcgaca
     6061 acggcgcatg gcaatccaac cgttaaggag aaatgatgaa tccgaaaacc ttgggccgtt
     6121 tgtcgctgtg tgcggcggtc ttggctctga ccgcctgccg gcggcgggca taaaaacctg
     6181 tattattacg gcggttatcc cgataccgtc tatgaaggtt tgaaaaacga cgacacttcg
     6241 ttgggcaagc agaccgaaaa gatggaaaaa tactttgcgg aagccgccaa caaaaaaaat
     6301 gaatgccgcc ccgggtgcgc acgcccattt gggactgctg ctttcccgtt cgggagacaa
     6361 agagggcgcg ttccgccaat ttgaagaaga gaaaaggctg tttcccgaat cgggcgtatt
     6421 tatggacttc ctgatgaaaa ccggtaaagg aggcaagcga tgaaaccttt gattttaggg
     6481 cttgccgccg tgttggctct gtctgcctgc caagttcgaa aagctcccga cctcgactac
     6541 acgtcattca aagaaagcaa accggcttca attttggtgg ttccgccgct gaacgagtcg
     6601 cctgatgtca acggcacttg ggggatgctg gcttcgaccg ccgcgccgat ttccgaagcc
     6661 ggctattacg tctttcccgc cgcagtcgtg gaggaaacct tcaaagaaaa cggcttgacc
     6721 aatgccgccg atattcacgc cgtccggccg gaaaaactgc atcaaatttt cggcaatgat
     6781 gcggttttgt acattacggt taccgaatac ggcacttcat atcaaatttt agacagcgtg
     6841 acgaccgtat ccgccaaagc acggctggtc gattcccgca acgggaaaga gttgtggtcg
     6901 ggttcggcca gcatccgcga aggcagcaac aacagcaaca gcggcctgtt gggggctttg
     6961 gtcggcgcag tggtcaatca gattgccaac agcctgaccg accgcggtta tcaggtttcc
     7021 aaaaccgccg catacaacct actgtcgccc tattcccgca acggtatctt gaaaggtccg
     7081 agattcgtcg aagagcagcc caaataagca tatgccgtct gaacctctcc gagcttcaga
     7141 cggcatatgc gaatcttgat acttgcaagc cgcaccgccc aaaatcaggc gaccggtttc
     7201 aatatccgaa caaggttcgg gttctgtatt ttgcagaacc cgaacctttt attcaaattt
     7261 aaacttaatt ccggcgtggt tgtatggtaa attatagtgg attaaattta aaccagtacg
     7321 gcgttgcctc gccttgccgt actatctgta ctgtctgcgg cttcgtcgcc ttgtcctgat
     7381 ttttgttaat ccactataac aagcaatatg ccctgaccgg caaaacttcc ccaaacttca
     7441 tcaaaaaatc aactgtaccc gtctttttca gacggcattg ataccgtaag agatttccca
     7501 tgcaaaaccg gcaaaccgag ctttattcca cgccgtcttg gctgttgcag accttattga
     7561 tgattaccgc cgcctcggcg gtgattctgt ttttcgcgcg caacacgcgc ttggggcggg
     7621 agtttgccta tatcctgcgc ctttgcctga caccgaaaag cacggtcaaa gtattgctgc
     7681 tgattacggc aatggttacg ctgctgttaa ccgaagtgcg gttgaatgtg ttgagtacct
     7741 tcatgtccaa aggactttac gattcgatgc aggatttgaa tgcttcggca ttttggatgt
     7801 ttgcagcgat gaacgccggc gtggtactga tacgggcgtt taacaacgtc gttaacgact
     7861 ttctcgatta aggcttggcg attaaatggt cggaacggct caatgaagtt ttgacttcgc
     7921 gctggcttgc cgacaaaaac tactaccgcc tgcaaatgcg ccgccacgcg ccggacaaca
     7981 tcgaccagcg tatccaacag gatgcgcagg aattcatcgc ttcgaccatc gaatttgtgc
     8041 gcggcatggt caattcggtc gttacttctc tggaatttgc cgttgttttg tagggcttgg
     8101 caggcatcct gaccgtgttc ggcttcgaca ttccgcacgg cattgtttgg tttgtcttta
     8161 ttttcatgat tttggcgatc tttatcgcca tgtggatagg caaccctttg attcgttaca
     8221 attatgaaaa caaaaaactc aacggcgact accgttattc cctcatcctc gtacgcgacc
     8281 acgccgaaag cgtggcgttt tacagcggcg aacaacacga acacggccgg ctttccgacc
     8341 gctttaaagc cattatccgc aaccgttggc gcatcgcgcg gcaaagcgtc tgcttaagcg
     8401 gctttaacga tatgttcacc aacggcatca aactcttcct gattattttg caagctccgc
     8461 gcctgtttgc cggacaaatc aaaatcggcg acatccagca gaccgtccaa gccttcgcgc
     8521 gactgcaaaa cgcgctgtct ttcttccgaa tgttctacaa caaattcacc gcctgccacg
     8581 cccgactgga gcgtctgtac gtctttttgc tgagtaccga agaacaacac ggcgcgcagc
     8641 aacccgagat tagcgaagtt tcagacggca ttgcactgga aaacgtcgcc ctgttccgcc
     8701 acaacggcga agttttattg gacggcatca acatcaaact caaaagcggc gattccctgc
     8761 tgatacgcgg cccgagcggt tgaggcaaaa cctcgctgct gcgcgcgctg gcggggcttt
     8821 ggccgttcgg cagcagcggc aaagtcagcc gtccgccgca tcaaggcatc ctcttcctgc
     8881 cgcaacgccc gtacacggca caaggcagcc tgcgcgacgc ggtttgttac cccgatatcg
     8941 acaaacagca tcccgagtta gccgaagcca tgaacacctg ccgcttgggt tatctgattg
     9001 acaaattgga taaaacagac ggctggcagc acaaactctc ccccggcgaa ctgcaacgcg
     9061 tcgccttcgt ccgcgccctg ctctccaagc ccaaaatcgt cctgctcgac gaagccgccg
     9121 ccgccttgga cgaaccggcc gaagcctagc tctaccgcgc cttaaagcaa aaactgcccg
     9181 acagcatcat cagtatcgga caccgaagta cgctcaacgc gttccgcaat atgcacctcg
     9241 atgtcggcaa cgctgcctgc ggctgaacga tgccgtctga agccgttttc agacggcatc
     9301 gttcaaattg gaaagacacg cgaaaacaac gtacaataaa cccgattcca acccatccgg
     9361 tatgcctttg tgaaccagct tattttcgac tttgccgcac acgactatcc gagtttcgac
     9421 aaattcctcg gcacggaaaa tgccgaactg gtctatgtgt tacagcataa acacgacccg
     9481 tttatctacg tctggggcga agaaggcgcg ggcaaaagcc atctgttgca ggcgtgggtc
     9541 gcacaggcgc tcgaagccgg caaaaacgcc gcctatatcg atgccgcctc catgccgctg
     9601 accgatgccg cgtttgaggc agaatacctc gccgtcgatc aagtcgaaaa actgggcaac
     9661 gaagaacaag ccctgctttt ttccatcttc aaccgcttcc gcaacagcgg caaaggcttt
     9721 ttgctgctcg gttcggaata cacgccccag cagctcgtca tccgcgaaga tttgcggacg
     9781 cgtatggcat actgcctcgt ttacgaagtc aagccactaa ccgaccaaga aaaaatcgac
     9841 gcgctcgcca atatggcggc ggcacgccaa gtaaccgtcg attccgaaat tttcgaatac
     9901 ctgctcaaac actggcggcg cgatatggac agcctgatga tgatgctcga cacgctggac
     9961 aactacgccg taaccatggg caaacgcatc accctgccgc tgcttcgcca gcttttgaaa
    10021 caacaggaaa cccaatgaaa aacctcgcca tcttcgacct cgacaacacc ctcatcaaca
    10081 ccgattccga ccacgcctgg ccgcaatacc tcatcaaaaa agggttggtt gacgctgccg
    10141 aaaccgaagc gcaaaacgaa aaattctacc gcgactacca aaacggctgc ctcgacatcg
    10201 acgcattcct caaactccac ctcgccccgc tcgcccgtta cagcaaagaa gagctggcgg
    10261 agtttcaccg cgaatttatg gcggaataca tcatccccca catctcgcct atgcagcgta
    10321 tgctggtgca gagccaccaa atggcaggcg acgaaaccct cgtgatttcc tcaaccaacg
    10381 agttcatcat cacccccgtc tgccgccttt tcggcatcgc caacatgatc ggcacacaac
    10441 tcgaaaccgg tcccgacggc cgctacaccg gcaattacat cggcacgccc agcctcaaag
    10501 aaggcaaaat cacccgtctg aaccaatggc tcgccgaacg cggcgaaacg ctcgaaagct
    10561 acggcaaaac ctatttttac agcgactcca aaaacgacct gccgctgctg cgcctcgtca
    10621 gcgaacccgt cgccgtcaac cccgatgccg aactggaaaa agaagccaaa gaaaaaggct
    10681 ggccggtttt gaatttcaaa tgacgcaatg ccgtctgaag cccgattcgg cgttcagacg
    10741 gcattgaggc tgaaatccca aaaacccaaa gccacaggaa ttcatccgga aaaacaaaaa
    10801 acacaggaat tcatcgggaa aaacaacaat ctttccaccg tcattcccac gaaagtggga
    10861 atcttgatcc gtccgcacgg aaacttatat ttcgtcattc caccaatccc acaccaccct
    10921 taccggttca aatccgcaca aaaatccaca tcccgtcatt cccacgaaag tgggaatcta
    10981 ggacgtaaaa tctaaagaaa ccttttttcc cgataagttt ccgtgccgac aggtctggat
    11041 tcccgcctgc gcgggaatga cgaaatttca aagttatggc gttatcggaa aaacagaaaa
    11101 tcaaagccgg agaatttatc caaaacaacc ggatttcaaa aaaaccaaat tcccggcggg
    11161 aatgacggat tttaggtttc tgttgtggtt tctgtttgct cgggaataac aacttagaaa
    11221 ttgcccgaaa ccccaaaaac agaaaccgga caaacaggtt ttccgccaaa gccggcattt
    11281 tccgactttg cttcaggcat cttcccctct gcctaaaatc atcgacccga taccggcatc
    11341 ggtaaagatt tccagcaaaa gcgcgttggg caacctgccg tcgatgatgt gcgtggcttt
    11401 cacaccgttg gcggcggctt cgaccgcaga agcgattttc ggcagcatac cgccatacag
    11461 cgtgccgtcg gcaatcagcc catcaatccg tttcggcgtg agtttggtca gcagattgcc
    11521 cgttttgtcc atcacaccgg cgatattcgt catcatcaag agtttttcgg cgttcaattc
    11581 ttccgccaat ttgcctgcca ccaaatcggc gttgatgttg aacgcttcgc ctttttcacc
    11641 tacgccgacg ggggcgacga cgggaatgca gccgcgttct atcagccctt taaccaaacc
    11701 ggtatcgatg ctttccaccg taccgacctg tccgatgtcc acgctattct gttcgggcgt
    11761 atcgaccaaa agtttcttcg ccttaatgaa atggtcgtcg cgcccgctca cgccgaccgc
    11821 gtgccctcca tatgtgttaa tcatcgacac gatttccttg ttgacgtgcc cgcccaatac
    11881 catttcgaca atatccatcg tctctttgtc ggtaacgcgc attccttgga caaattcgcc
    11941 ctttttgccg actttttcaa gcatcgcatt gatctgcggc ccgccgccgt gaacgatgac
    12001 gggatgaatg ccgaccagct tcagcagcac gacatcgcgg gcaaaccctt ctttcaaggc
    12061 aggttcggtc atcgcgttgc cgccatactt gatgacggcg accgaaccgg aaaaccggcg
    12121 gatgtaaggc agtgcttcgg caaggatacg cgccttgtcg gcggcggaaa taatgttttc
    12181 aaactccata acggctccat attgttgaca atttcggctt atgttaacgc caaacgccgt
    12241 ctgaaacaat cttcagacgg cgtttggcac accttcgggc aggttgaagc cttgcgatac
    12301 gggcggtaaa atcgcggttt atccggttcg agaaaccggc gacagcaagg actttcccat
    12361 gattaaaatc agcacccgct tcgatgccgg ctcggtcgtc gtcaaagacc tgaccgaccc
    12421 ttccaacatc cgcctcgccc tgcgtcccga caacgcctcc gatttcgcac aatggttcta
    12481 cttccggctg caaggcgcgg cctatcaaaa ctgcatcatg cattttgaaa acgcggcaga
    12541 agccgcctac ccgaaaggct gggaaggcta tcaggcgtgt gcctcatacg accgccgcaa
    12601 ctggttccgc gtaccgactt cctacgaaaa cggcgtactg accgtcaatc atacgccgct
    12661 gtccaacagc gtgtattacg cctatttcga accctattcc gaagagcagc acctcaacct
    12721 cctcggcgac gcacaaggca gcggcctgtg ccgcatcgac gacttgggca gcaccgtgca
    12781 aggtcgcgac atcaatctgc tgaccatagg caaccaagtc gaaagcgaca tgaaaatctg
    12841 gattaccgcc cgccagcacc cgggagaaac catggcggaa tggtttgtcg aagggctgct
    12901 cggcaggctg ctcgattcgc aagacccgac agcacgcacc ctgctcgacc gcgccacgtt
    12961 ctacatcgtc cccaatatga atcccgacgg ttcggcactg ggcaaccttc gtaccaacgc
    13021 cgccggtgcg aacctcaacc gcgaatggga aaacccgact ttggaaaaaa gccccgaagt
    13081 gttcttcgtg cgcggaaaaa tgctggaaac cggcgtggat ttgtttttgg acatccacgg
    13141 cgatgaaggt ctgccctttg tctttgttgc aggaacggaa ggtgtgccga actacaatcc
    13201 gcgcatttcc gcgttggaag cgcagttcaa aaccgccctt ttgaacgcca gccccgattt
    13261 ccaagacgaa tacggttacg aaaaagacgc gccgggcaaa gcgaatatga ccttggcgac
    13321 caactgggtc ggcaaccgtt tcaactgcct tgcctacacg ctggaaatgc cgttcaaaga
    13381 caacgccaac ctgcccgacg acgacttcgg ctggaacggc cagcgttctt tgcggcttgg
    13441 ggaagcggtg ctttccgcca ttttgaacgt cgccggcgat ttgcgctgac actccccact
    13501 gaaaatgccg tctgcaagcc cttttgcgtc tttcagacgg catttgaaaa cgaaagcccg
    13561 ttatgattat ccatcaccaa ttcgatcccg tcctcatcag tatcggcccg cttgccgtcc
    13621 gctggtatgc cttaagctac atcctcggat ttattctttt tacctttctc ggcagaaggc
    13681 gcatcgcgca aggcttgtcc gtttttacca aagaatcgct cgacgacttc ctgacatggg
    13741 gcattttggg cgtgattttg ggcggacgct tgggctatgt cctgttttac aaattctccg
    13801 actacctcgc ccatccgctt gatattttca aggtatggga aggcggaatg tcgttccacg
    13861 gcggcttttt gggtgtagtt attgccatat ggttgttcag ccgcaagcac ggcatcggct
    13921 tcctcaaact gatggacacg gtcgcgccgc tcgttccgct gggtctcgct tcgggacgta
    13981 tcggcaactt tatcaacggc gaactttggg gacgcattac cgacattaac gcattttggg
    14041 caatgggctt cccgcaagcg cattacgaag atgccgaagc cgccgcgcac aatccgcttt
    14101 gggcagaatg gctgcaacaa tacggtatgc tgccgcgtca tccctcgcag ctttatcagt
    14161 ttgcccttga aggcatctgc ctgttcgccg tcgtttggct gttttccaaa aaaccgcgcc
    14221 cgaccgggca gactgccgcg ctttttctcg gcggctacgg cgtgttccgc tttattgccg
    14281 aatttgcgcg ccaacccgac gactatctcg ggctgctgac cttggggctg tcgatggggc
    14341 aatggttgag cgtcccgatg attgttttgg gtatcgtcgg ctttgtccgg ttcggcatga
    14401 aaaaacagca ctgaccgcct gtgaaaaata ccgtctgaaa catggaaatc cggtttcaga
    14461 cggcattttt acgtttggtt cagatgaaaa caaacgcttc aattcttacc gcaacacgcc
    14521 ttgtatttcc tgccgctgcc gcacggacag ggatcgttcc tgccggtttt ttccccttcc
    14581 ctgcggacgg tttgcggttt gttgatgacc gcctgccagt agcggtagat gtctgccagc
    14641 gcgtaaggca gttcggacgc aagttccgcc agctcgcctt cggtgaattg caggcggata
    14701 gcgccgtttt cctcttcgtc gtaaatgccg cccaatgcca tcacggggta aaacagctct
    14761 tcaaacgctt catcatcggc ggcttcaaac caatcggtcg gcacaatgtc caaaccgtaa
    14821 agataggcgt tgcaccaagt gtaaaaatcg ctgccgccct cgccgtcgtc gtagagccac
    14881 aaatcgggca gctttttatc cgacatcgcg gcggttgttt ccatcgccat tgccaaaacc
    14941 agccgttcga tttcggaacg ttcggcggcg gtaaattgcg attcgtcgcc caacacttcg
    15001 ggcagccagt cgagcggtgc caatttgtcc ggcccgctca acagcgccgt cataaaacct
    15061 tgaacctcgt cgcaacgcat cgtgttgcct tgttcgcttt tggcatccaa caattcgccc
    15121 aaccgccgtt tggatgcttc ggtaaatttt cgggaatcca tcattttcct tttcaaatgg
    15181 gttttgcgcc ctattatagt ggattaaatt taaatcagga caaggcggcg agccgcaggc
    15241 agtacaaata gtacggcaag gcgaggcaac gccgtaccgg tttaaattta atccactata
    15301 tcgccgcaat gccgtctgaa gcctttttat gcttcagacg gcatcgtctg ttttcacgct
    15361 caaatcgtac cgctgccctg cgccttcggt ttggcggcac taaattccag cttgctcaaa
    15421 gcggaaaggt aagctttggc ggtcgccgcc aaaatgtcgg tatccgcgcc ctgaccgttg
    15481 gcgacgcggt tgccgcgcgc caaacggacg ctggtttcgc cttggctttc cgtaccttgc
    15541 gtgacggcgt tgacggaata aatctgcaaa gtcgcgccgc tttgcgccac gctctcaatc
    15601 gctttgaaaa ttgcatcaac agggccggag ccggttgcgg aagcgcgttt ttcttcgcct
    15661 ttgatgccga acacgatgtc ggcgcgcggc tcttcgccgg tttcggtgct gattttttga
    15721 gaaatgaatt tatagctttc ggcattcata ttgcccattt cgtccgacac cagcgcgtgc
    15781 aggtcttcat cgaagatttc gcgttttttg tcggcgagtt ctttgaagcg tgcaaatgcc
    15841 gcgttcagtg cctcttcgct ttccaactcg atgcccaaat ccgccagctt ggttttgaag
    15901 gcgttgcggc cggacaattt gcccaagctc aatcggtttg ccgaccaacc gaccgattcg
    15961 gcagacataa tctcgtaagt ttcgcggtgt ttcagcaccc cgtcctgatg gatgcccgat
    16021 tcgtgcgaaa aggcattcgc gccgacaatg gctttattgg gctgcacggg atagcccgta
    16081 atggtggaca ccagtttgga cgaaggcacg atttgcgtgg tatcgatgcc ggtttccaag
    16141 ccgaacaagt cgtggcgcac cttcaacgcc atcacgattt cttcaaccga agcattcccc
    16201 gcgcgttcgc ccaaaccgtt aacggtacat tccacctgac gcgcgccgcc ttttaatgcg
    16261 gcaagcgaat tggcaaccgc caagcccaaa tcgttgtggc agtgtgccga ccagacgact
    16321 ttgccgccgt tgggcgtttt ggcaatcagt tcgcggaaaa attcttcggt tttgtacggg
    16381 atggaatagc cgacggtatc gggaatattg atggtggtcg cgcccgcttc aatcaccgcg
    16441 ccgcagattt cggcaaggaa atcgatttgc gaacgcaacg cgtcttcgca ggaaaattcc
    16501 acatcgtcgg tgtattcacg agcgattttt accgctttga ccgccgcctc aatcacctgc
    16561 ttcggcttca tcttcagctt gtactccata tggatggggc tggtggcgat gaaggtgtgg
    16621 atgcgttttt tcggcgcggg cgcaacggcc ttacccgcct gacggatgtc ccgctcgatg
    16681 gcgcgggaca atgaacagac cgttgatttg gtaatggttt tcgcaatcgc attgaccgcc
    16741 tcgaaatcgc ccgggctggc ggcggcaaaa cccgcttcga tgatgtccgc gcccaatttt
    16801 tccaactggc gggcaacgcg gattttttcc tctttggtca tagcggcgcc gggcgattgt
    16861 tcgccgtcgc gcagggtggt gtcgaaaata ataacgcggt tggcctgtgt catttctgtt
    16921 ctctccagag attcgttttt ttgtaaaaaa gcattcaaat ccagcggtct tccttgcgat
    16981 tcggcaagcg cggtcaattt ttgcagttgc gccaaaggca gcgagccgcg tgtgcgccat
    17041 ttgtagatgg cggcggtcgt cgcggcattt tcaggatcgt gccgtttcaa cgcttcggca
    17101 agcgcgttca cgccgccgaa ataggcgacc agacggtcta tatctaattg catggtagtc
    17161 cttgtctaaa ataaatcagc ccgcagcaga aatatggaca ggattatacg cattttggac
    17221 aaaacggcaa tattaatttg aaaaaatctc aataagttgc tataaatttt attaatttta
    17281 tacattttgt ctattttatt gcagatgcgg cgtgattgtt gacaattgca acagaacagg
    17341 gcaaattcgg cggtacaagg cggcaacgag acaggacaaa ccaacaagga cggaaacaat
    17401 gaaatacaaa agaatcgtat ttaaagtcgg cacatcttcg attacccgtt cggacggcag
    17461 cctctcgcgc ggcaaaatcc aaaccatcac ccgccagctt gccgcattgc atcatgcggg
    17521 acacgagctg gtcttggtgt cttccggcgc ggttgctgca gggttcggcg cgctgggttt
    17581 caaaaaacgt ccggtcaaaa tcgccgacaa acaggcttcc gccgccgtcg ggcaggggct
    17641 gctgatggaa gaatatacgg caaacctgtc ttcagacggc atcgtgtccg cacaaatcct
    17701 gctcagccgt gccgactttg ccgacaaacg ccgctaccaa aatgccggcg gcgcactttc
    17761 cgtgctgctg caacgccgcg cgattcccat catcaatgaa aacgacacgg tttcggttga
    17821 ggagttgaaa atcggcgaca acgacacatt gagtgcgcaa gtggcggcga tgatacaggc
    17881 agacctcttg gtgctgctga ccgacataga cggtctttac accggcaacc cgaacagcaa
    17941 tcccgatgcc gtacggctgg acaaaatcga acacatcaac catgaaatca tcgaaatggc
    18001 gggcggctcg ggttcggcaa acggcacggg cggtatgctg accaaaatca aagcggcaac
    18061 catcgccgcc gaatccggcg taccggtgta tatctgttcc tcactcaaac ccgattcatt
    18121 ggccgaagcc gccgaacatc aggcggacgg ctcgtttttc gtcccccgtg ccaaaggttt
    18181 gcggacacag aagcaatggc tggcgttcta ttccgaaagc cggggcagcg tttatgtgga
    18241 cgaaggtgcg gaacacgctt tgtccgaaca agggaaaagc ctgctgatgt cgggcattgc
    18301 cggaatcgaa gggcattttt cccgtatgga caccgtaacc gtgtacagca aggcaaccaa
    18361 acagcccctg ggcaaagggc gcgtcctttt cggctccgcc gccgccgaag acctgctcaa
    18421 atcgcgtaag gcgaaaggcg tgttcatcca tcgggacgat tggatttcca tcacgcccga
    18481 aatacgcctg cttctgaccg aattttagaa aaggaaaccc atgtcaaaca cacaaaaaca
    18541 gcttgccctt gccaaagcgg caaaaaaatc cgtcaacacg gcggatgcgg aagaaaaaaa
    18601 ccgcgcgctg cttgctatgg cggacagtct ggaagcggcg gcggaagata ttttggcggc
    18661 aaaccgtttg gatttgaaag cggcggcagg caaaattccc gacagcatga ccgaccgcct
    18721 tttgttggac ggcaaacgca tttgcgcgat ggcggacggc atcagggcgg ttgccgcgct
    18781 gcccgacccc gtgggcgaaa tactggaaac ctcgactctg cccaacggct tggaaatcgt
    18841 caaaaagcgc gtggcgatgg gcgttatcgg cattatttac gaaagccgcc cgaacgttac
    18901 ttccgatgcg gcggctttgg cactgaaaag cggcagcgcg gtcgtactcc gcagcggcaa
    18961 agatgcattt caatccgcac gcgccatcgt tgccgccctg aaaacggggt tggcacaaac
    19021 ccgcatcgac cccgaagccg tacagctcat cgaagacaca gggcgtgagg gcagttacga
    19081 aatgatgagg gcgaaagatt atctagacct gctgattccg cgcggcgggg cagggctgat
    19141 acgggcggtg gttgaaaatg ccgtcgtgcc ggtcattgaa acggggacgg gcatcgtcca
    19201 catttatatc gacaaggacg cggattggga caaggcactc cgtatcgtgt acaacgccaa
    19261 aaccggccgc ccgtccgtgt gcaactcgat ggaagtgctg ctggtgcatg aaggcattgc
    19321 tgccgacttc ctgcccaagc tcgaacggct gttggttcgc ggccgtatag aagccggact
    19381 gccgcccgtc cgcttccgtt tggatccgca ggcggcgcgg tatatcggcg gcgaagcggc
    19441 gggtgcagac gatttcgata ccgagttttt agactacatc ctcgccgtga aaaccgtcgc
    19501 ttcggttgaa gaggcagtcg ggcacatcga agcccgcggc acgcaccatt cagacggcat
    19561 cgttaccgaa aaccgccacg ctgcggacta tttcacgacc catatcgatt ctgccgccgt
    19621 gtatatcaac gcgtccacgc gcttcaccga cggcggcgaa ttcggcttgg gttgcgaaat
    19681 gggcatctcc acgcaaaaac tccacgcccg gggcccgata ggtttgaaag agctgacgag
    19741 ttacaaatac atcgtacaag gcacgggaca ggttagggaa taatccgaat tcaaacgtct
    19801 gatatagtgg attaaattta aaccggtacg gcgttgcctc gccttgccgt actatctgta
    19861 ctgtctgcgg cttcgccgcc ttgtcctgat ttttgttaat ccactataaa aattccgtct
    19921 gaaacagtct tcagacggca tttttatttg caaaaaaatc aagcattgtc caaggggacg
    19981 agaatcgtac ggttgccgtt gtgttccggt gcggacacaa tgccttccgc ttccatttgg
    20041 tcaatcagac gcgcggcgcg gttgtagccg atacgcaagg cgcgctgtac gcccgaaatg
    20101 ctggctttgc gcgttttcag gacaacggat acggcctcgt cgtacatcgg atcggtttcg
    20161 ccgtcgccgc tgcgcccgat gccgggcagc tcttcgctgc cgccgccgct caaaatatcg
    20221 tcaacatagt ccggctcgcc aaactgcttc agatattcga ccacgcggtg cacctcttca
    20281 tccgaggcaa acgcgccgtg aacgcgctgc ggataggcag tacccggcgg caggaacagc
    20341 atatcgccct gaccgagcag gttttccgcg cccatttggt cgagaatcgt gcggctgtcg
    20401 attttgctgg acacttggaa cgcgatacgc gtcgggatgt tcgccttaat cagacccgtg
    20461 atgacatcga cgctggggcg ttgtgtggca aggataaggt ggatgcctgc cgcgcgggct
    20521 ttttgggcga ggcgcgcaat cagttcttcg attttcttgc ctgccgtcat catcaaatcg
    20581 gcaaactcat cgaccacgac cacgataaac ggcagttttt ccaaaggttc gggatcgtcg
    20641 ggcgtgaggc tgaacggatt gccgattttt tctccccttg ctgcggcttc ggcggttttt
    20701 tggttgaagc ccgcaagatt gcgcacgccc ataaagctca tcaggcggta gcgtttttcc
    20761 atttcgttaa cacaccagtt cagcgcgttt gccgccagct tcatatcggt aacgacaggg
    20821 gcgagcaggt gcgtgatgcc ttcgtaaatg ctcaattcca gcattttcgg atcgatcata
    20881 atcatacgca cgtcttccgg cgcggctttg aaaagcatag acagaatcat cgcgttgaca
    20941 cccaccgatt tgcccgaacc ggtcgtgccg gcaaccagca aatgcggtgc tttgcccaag
    21001 tcggttacga cgggctgtcc ggtaatgtcc tgaccgagcg cgagcgtcag cttggatttg
    21061 gattcggcaa actcgggcga attgaaaatt tcgctcaggc gtatcatttg gcgtttcggg
    21121 ttcggaagtt ccaaacccat gcaggttttg ccggggatgg tttcgacaac gcggatggaa
    21181 gccacgccga gcgaacgcgc caagtctttt tccaaattca gaacggaatt gccgcgcacg
    21241 ccgacatcgg gttcgatttc ataacgcgta atcacggggc cggaataaga atcgacaacc
    21301 ttgaccttga ctttgaactc cgccaatttt tcttcgatgg tgatgctgtt ttccaacagt
    21361 tcttcttcgg tttgcgtcgc ctcgggattg aacagcggag gcagaagcag gtcggttgtc
    21421 ggcaggtgtt cggataccgc accggtctct tccgattgga acgccccttc atccgcttcc
    21481 gtatccgata cccggcagga cgggcgttca gacggcacat cttcaaacgg acaaaccgcc
    21541 tgactgtcat gcccgaacgc ttcggtttcc gacagatatt gcccgcttga ccgctctgcc
    21601 gcaccctcac tgccgtcatc tgcaatagcg gcggtttcct cctgccaacc tccattcaaa
    21661 acatcagcgg caagatggtc ggtttcggca atgcggctgc gttgcgcctg ctcgaatcct
    21721 gccggcggct cataggtacg gttgtagatt tccgatacgg gaggcggcgg cagaatatcg
    21781 atttcgggta cggctacctc cggcacttcg ggtggttcga ccacccaagc atcgggcgcg
    21841 gcaggctctt caatatggat atcggcagct tcatcataaa ccggaccgcc gtatcccaca
    21901 gacgaaacgg tttccgtgaa aacattttcg gtttcagacg gcatttcgac atcccgtttc
    21961 ccgacaaccg tccgactttc cggaatcagg cgcgaaatcc gcgcctccgc agaaaccgtt
    22021 gccttgttcg gttctttcaa attgacggaa acgcggcggc gggcatcgcg gacggctgtg
    22081 ccgtctgaaa cggactgccc ttgggaaaca tccggggatt ttgcctccgc ctgccctttc
    22141 tcctgccctg catgacggcg gaacggcgca ttccgtgcat tttcggcttt gactgcagaa
    22201 aaggcagacg gatgctgctt ctcaaaatac ggctcaaatc cgtaatccgc agactcggaa
    22261 aacgcttctt tgtccgcatc aaacatacgg gaatacgtgc gttgaagcac agggtcgtcc
    22321 aaaccgataa tctgcagccc ttccatcggg gtatcggaca cgcgtacttt ggggacggct
    22381 gttccgtttt tctcaaatgc atcgatatag cgttttttcg tttcccttaa agccgcgctg
    22441 cttaaagcac gcgttgcttc ttccaaagtg atttccttaa aaaccggacg gacgggcgaa
    22501 gttttgcttt cagactgcat caacccttca gcaatactcc ggtcgaatgg gatgcggcgg
    22561 ttgtcgatta cggcagttgc aatgtcttcc gtatcggcag cctcttcctc cgcagcttct
    22621 gctgcttccg tttccgcttc ttccgtcccg tttccactgt ctgaataccc gtcggatgcg
    22681 gtcggaacat ccgcacggtt tgcagaagca ggcggaacgg gcctgtccgg ttcggattcg
    22741 tgcgccagat agtttcggca gaaacggacg acaccgacaa acagccaata cactgccgtt
    22801 ttgacggcat ggaaaagcat cagggaaaac tcgggaaaat cgggcatacc gtctttgatt
    22861 tcaggcagct ccgcctgttt ttcccctttc ttttcctgcc acgcagaaac ctcgcgcatc
    22921 cactcgcgtt cggattgtgc gcggacaaaa aacaggccgg caagcgcaag caacaaaata
    22981 acgatcaaaa ctatccaaaa catatgccgt ttcccgcaag acaaacgatt aaccgagttt
    23041 attttaacgt gtttccagcc caaaaaaaac aaccggccgg caattctgcc gaaaccgatt
    23101 cggctttcgg tttgcccccg ccgacagtat aatagccgcc ccttccctta atctttgcgg
    23161 cattaccatg attttccaaa cagtctggtt ttcagatgtg gtactgtcgg tttcgtggat
    23221 tgtccttatc ctgatactgg cagcttccgc gccgtcggca ttccgttcgc ttgcccgcta
    23281 ccgttccgcc cttcccctgt gtaccgtaat tttttccgca gcatggtgtc tgaacgcctc
    23341 tgtcggcggc ggacagcttg cccagatgaa ctaccacctg cttgccgtca atctggttac
    23401 actgatggtg gatacctccg ccgccctttg gcttgccgcg ctgctgatgc tgccctactg
    23461 cctgctgttt gccggttctg ccggcgcata tccgccgaac gctttggtgc tgatactgcc
    23521 cgcgcttgtc gtcaaccgcc tgtcgcgtat gctggtcaac cgtctgccgc ccaatatttt
    23581 catctttatt ttcgtcaacg gctttctcgc ttccgccgcc ggcattctgc tgaccgggct
    23641 ggtgctgatc ggtattttgg atgccgcaaa cgcttttccg tccgaaatat tgtggacggc
    23701 cgccctgccc gtctttattc tgctggcgtg ggcggaagcc ttcctcagcg gcatttcaac
    23761 tgccattttc gtggcactga agccccattg gatcaacact ttcgacgaca accgctatct
    23821 gaagtccgag cgcggcatat ggctgtagcc ttcagacggc ataggcagac aaaaccatgc
    23881 tttccaacat cctccccctt tccatcggtg caatattcgg cacaacggcg cgttggctgc
    23941 tcaacctcgc cgtccccgca tcgttgtctc ccgccacagg caacctgttt gccaactgga
    24001 cgggcgcgct gctcatcggc atctttgccg aaaccgtcag ccatccgcaa tggaagctgc
    24061 tgctgattac cggttttttc ggcagcctga ccacgctttc cggattttca ctggaaaccg
    24121 taaccctgct ccaatcgaac cgtcccgctt cggcacttgc caatattttc ctacacacgg
    24181 caggttcgct gctgctgact tggctcgggc tgaagatagg gactgcagtc aaataaccgc
    24241 aaaaaattgc ttcctttggt tttgacataa tctataaatt ggcttcgctt gtttaaatac
    24301 tgcctgtgcc aattatagtg gattaaattt aaatcaggac aaggcggcga gccgcagaca
    24361 gtacagatag tacggcaagg cgaggcaacg ccgtaccggt ttaaatttaa tccactatac
    24421 cgttctcaaa ttcaaattgg gcttttaggt ctataacaaa gaaaaagcct tgggaggata
    24481 aacctaccaa ggctttttct taaaaaacgc tctatcactg tgcctaaaaa tgcaaaaaag
    24541 taaccgtcat aatccttttg ccaaaatcaa tatcatcatc cgatgaatga acggacggta
    24601 tataagaaag cgttaataaa ctcataaacc agtaagaaaa atcagtaacg aagatattca
    24661 ttattaccca ttcttaaaaa ttatcacgtt cgtttgggta attatcatac ccttttccct
    24721 cttattacta aagcacgaat tactttaaag tacgcaccca gagacaagcc gaaaaggcat
    24781 atccgatccg ccaaacaaaa tgcccgccga cttactccgg cgggcggttc caacatcctg
    24841 tcaatccttc atcagccagt attgcaaacc gattaatgtt ttaccgtctt taatttcatc
    24901 gtttgccaat gcctgacgga cttcatcttt cgacatcagc acggtttccg ttatttcatc
    24961 ttcatcatta gaaagcgtac tgcccaagcg cacgccttcc gcctcgaaca gatacatttt
    25021 ttcattgcaa aaaccgaccg ccgtataaaa actgtacagc aggcgcacgc tgtcggcaac
    25081 ataaggcgtt tcctccgcca attctcgcag cgcacacgct gccatatcct cgcccgccac
    25141 atccagcttg cccgcaggaa gttccaatgt cgcctgattt gccgcataac gccactgccg
    25201 caccaaaacg accttttcgt catccgttac cgccaacacg cacgccgcgc ccggatgccg
    25261 gatgacgatg cgctgccctt cattgccgtt gggcagcctg accttatccc tgctgatact
    25321 gacgaaaccg ccctcgtaaa tggtttcgcc gcctaatttt acttccctca aatccacttc
    25381 atatctcctt tccgtttcct attctgccgt tcaatcttca cgcttgccgc gctcgatttc
    25441 cactccaacc tcgcgcacgc cttccaaaat acccggcttg acgattttca cgtgcaccca
    25501 caccgcgccg aaatatccca aaaccaaatc ggcaatatat tccgccaacg cttccaaaag
    25561 caggaaatcc tgttctttca gatgtcggcg cagcgtttcg catacctcgg cataatgcac
    25621 cgtattggca atatcgtcgt ccgaacccgc tttctcggga acgccgatgt ccaaatcgac
    25681 aatcagggtc tgcaaccgtt cgcgttccca gccgtacacg ccgataagcg tatccgcctt
    25741 catgccgtgc aaaaagattt tatccataat ccgccccgtt ttttgctaaa ataaccgcac
    25801 cattctaagt aaagtaccgc aaatgttcaa cataccggcc gtcgccgttt cctatttaat
    25861 cggttcactt tctttcgccg tcatcgtttc caagtattac gggatggacg acccgcgcac
    25921 ctacggatcg ggcaatcccg gcgcgaccaa tgttttacgc agcggcaaaa aaaaggcggc
    25981 cgcgctgacg ctcttgggcg atgccgccaa aggtttggtt gccgttttgc ttgcacgcgt
    26041 gcttcaagaa ccgctcggtt tatccgacag cgcaatcgct gccgtcgcac tcgccgcgct
    26101 ggtcgggcat atgtggccgg tgtttttcgg atttaagggc ggcaaaggcg tggcaacggc
    26161 attgggcgtg cttctggcac tctctcctgc aactgccttg gtctgcgcgt tgatttggct
    26221 tgtgatggca ttcggcttca aagtatcctc ccttgccgcg ctggtcgcca caaccgccgc
    26281 cccccttgcc gcactgtttt ttatgcccca cccttcttgg attttcgcaa ccctcgcaat
    26341 cgccatattg gtgttgctcc gccataagag caacatcctc aacctaatta aaggcaaaga
    26401 aggcaaaatc ggcgaaaaac gctgattcgg catttgtttt ccattacgtc atgccgtctg
    26461 aaaccatgtt cccgcgttca gacggcattt ccgcacaaac ggctttcata cataccatgc
    26521 tcagttacag acacgcattc cacgccggca accacgccga tatgctcaaa cacttcacct
    26581 tgtttttagt gctgcaatat ttcaaccgca aagacaagcc ctactggtac atcgacacgc
    26641 acggcggcgc gggtttgtac aatctcgaag gcagcgaggc gcagaaagtc ggcgaatacc
    26701 ggcaaggcat cgccctgctc cgacaggcgc aaaacctgcc tgccgaactc tctgactttg
    26761 ccgcgcacat acaaaaaatc ctaccctcgc ccgaacttta ctgcggctct ccgtggctgg
    26821 cgcaatcgct gatccgcatc ggcgacaaat tgcgcctgtt tgagctgcac cctgccgact
    26881 ttgtccatct gcaaaacaat atgggcgaag cgggattggg caaacgcgga caagtgttgc
    26941 gcgaagacgg ttacaaaggg ctgatttccc tgctgccgcc cccgccgcgc cgcgccgccg
    27001 tcctcatcga cccgccctat gaggaaaaac aggactaccg gcgtgtaacg gaaacgctga
    27061 aagccgcttt aaaacggttt gagtccggct gttatctcat ttggtatccc tgcctcagcc
    27121 gcgaagaaag ccgcaagctg ccggaagaat tgaaaaaact cctgcccgac aactaccttt
    27181 acgccgaact gcacgtccac gcgccgaaaa ccgacggttt cggtatgcac ggcagcggaa
    27241 tgttcgtgat taatccccct taccttttag ccgaacaatt ggcggcaaac ctccccgccc
    27301 tgacgcggct gcttgcgcaa gacgaaggcg cgcgctacct tttggacagc aaaatccgct
    27361 gaccccgatg ccgtctgaac ccttcagacg gcatcttccg tcaaacaaac aaaaccgggc
    27421 gatacacact ccatatcgtc cggttctgca taaaaccagt attcaaaaat cagaacacgc
    27481 ttttcattac acccacggta ccaaccacac cgttcagcag catcagacca ccggcagccg
    27541 tacccatacc ttgacggatt gcgtcatgct tattggcacg tttttcacgt tccaaagcca
    27601 actcctcaga aacattttta cgttgacggc ggtgttgcgc cagttccgca cggctaattc
    27661 gcgcttcggc acggttacga ccagccttga ttacggccga atcgtcgccg atagcatagt
    27721 tggctacaga attttcagaa gcgcaggcag caagcaaaac ggcacacaca gcaacaacgg
    27781 aaatattttt caagtttttc atacctgtcc tattatctca aaataaagaa aaaactaatc
    27841 caactggagt tttatcggat aaaataaata ttgggtgaat tttcgtttgc ctttttgatg
    27901 gcgcgtgccg catccatcat ttcttcccgg cgttctttac ggtattcggc acgctcggca
    27961 cgctcgctta tctgaatggc acgacttttc gcctgtattt ccgctgcaga ttcttgagtt
    28021 acaaaacggc ggtctgcgta agtacatgcc gtcaccaaca tcgcagccac cgacaacaaa
    28081 atcagtttct tcattttcat ctacctatat ttaagtttat ttgtaa
//
LOCUS       DAWXHA010000011        28051 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.011, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000011 DAWXHA010000000
VERSION     DAWXHA010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28051
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.011"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(97..2139)
                     /gene="recG"
                     /locus_tag="AABD07_000398"
     CDS             complement(97..2139)
                     /gene="recG"
                     /locus_tag="AABD07_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HFB2354993.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLGRLKLPRLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRVSGTAAALRGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPEPNIG
                     LVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQARETAPMLIEQNPEIVEAHLARWFSGREGYLGV"
     gene            complement(2225..2668)
                     /gene="secB"
                     /locus_tag="AABD07_000399"
     CDS             complement(2225..2668)
                     /gene="secB"
                     /locus_tag="AABD07_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HFB2354994.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGDPEVDMRVST
                     GSQKLEDGYYDVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(2689..2946)
                     /gene="grxC"
                     /locus_tag="AABD07_000400"
     CDS             complement(2689..2946)
                     /gene="grxC"
                     /locus_tag="AABD07_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HFB2354995.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQRLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            3165..4658
                     /gene="rng"
                     /locus_tag="AABD07_000401"
     CDS             3165..4658
                     /gene="rng"
                     /locus_tag="AABD07_000401"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HFB2354996.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSGHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNIEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(4693..5943)
                     /locus_tag="AABD07_000402"
     CDS             complement(4693..5943)
                     /locus_tag="AABD07_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HFB2354997.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVGPDSKSET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLRADGDDDYYRAYIRTTEQGRIAV
                     MQENEYREDLAEDAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRING
                     LPALSVYNIPSEIRGFVTAINLLLKRVDEDIRRRQRFVADAAHELRTPMTALSLQAER
                     LNNMPLPPDAGRQSAVLQQSIRRNKHLLEQLLALARSQSDETPLTKTTFGLQSRFRQV
                     LQELMPLVLEKRQDIGVAVGGDVEVSADETEIYTLVKTFADNAVRYTPNGGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESECARVLDPFYRILGTEQQGAGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(6025..6654)
                     /locus_tag="AABD07_000403"
     CDS             complement(6025..6654)
                     /locus_tag="AABD07_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFB2354998.1"
                     /translation="MSASLKDGGYAVDWVKNGAQVAAAAAAQPYDLMLLDLGLPGRDG
                     LDVLSEIRAAGCTVPVLIVTARDDLYSRLNGLDGGADDYIVKPFDMAEFKARMRAVLR
                     RGSGQAQACLSNGALSLNPATYQVEIIAEGRQVALSNQEFSVLQALLARPGVILSRSD
                     SEDKVYGWGGEVESNAVDFLIHGLCKKLGKESIQNVRGVGWLMPRQDAV"
     gene            complement(6922..8235)
                     /locus_tag="AABD07_000404"
     CDS             complement(6922..8235)
                     /locus_tag="AABD07_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HFB2354999.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLIGALLAGFDVS
                     QLKEFYSGGTKSVTQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLSVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPRGGPI
                     GRVASVLGADVGELYKPLLTVQIIGVVFILVLSLFLGVREKRRIVRELGALPAVADLI
                     KPAPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDLVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILISSIAAGIVPLP"
     gene            complement(8604..9170)
                     /locus_tag="AABD07_000405"
     CDS             complement(8604..9170)
                     /locus_tag="AABD07_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFB2355000.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPEVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
     gene            9335..10744
                     /gene="dacB"
                     /locus_tag="AABD07_000406"
     CDS             9335..10744
                     /gene="dacB"
                     /locus_tag="AABD07_000406"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HFB2355001.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRAGIPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLRDKGIRNITGRLMLDHSLWGEVGSPDHFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAAGSTDILTDPPLPHIFAQNNLKITASQAACPSVKKLMRASF
                     SGNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNRWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVAKNI
                     ISGGDGWLDAKLMCKERRA"
     gene            complement(10809..11978)
                     /locus_tag="AABD07_000407"
     CDS             complement(10809..11978)
                     /locus_tag="AABD07_000407"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HFB2355002.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPAISHEELSKAVIEQIIKPVLPP
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALV
                     CEHFDLRPKGIVQMLDLLRPIYGKSAAYGHFGREEPEFTWERTDKAASLKAAAGL"
     gene            12369..13217
                     /locus_tag="AABD07_000408"
     CDS             12369..13217
                     /locus_tag="AABD07_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFB2355003.1"
                     /translation="MHILLTALLKCLSLLSLSCLHTLGNRLGHLAFYLLKEDRARIVA
                     NMRQAGLNPDTQTVKAVFAETAKCGLELAPAFFKKPEDIETMFKAVHGWEHVQQALDK
                     GEGLLFITPHIGSYDLGGRYISQQLPFHLTAMYKPPKIKAIDKIMQAGRVRGKGKTAP
                     TGIQGVKQIIKALRAGEATIILPDHVPSPQEGGGVWADFFGKPAYTMTLAAKLAHVKG
                     VKTLFFCCERLPDGQGFVLHIRPVQGELNGNKAHDAAVFNRNTEYWIRRFPTQYLFMY
                     NRYKTP"
     gene            complement(13262..14326)
                     /gene="tsaD"
                     /locus_tag="AABD07_000409"
     CDS             complement(13262..14326)
                     /gene="tsaD"
                     /locus_tag="AABD07_000409"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HFB2355004.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRSHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYELLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNNICRAFQDAVVEVLEAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPMAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWSLSEIVK"
     gene            complement(14442..15629)
                     /gene="ccsB"
                     /locus_tag="AABD07_000410"
     CDS             complement(14442..15629)
                     /gene="ccsB"
                     /locus_tag="AABD07_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HFB2355005.1"
                     /translation="MTEHYKTLPEHELLIQKSLIRNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAVQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEEKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(15622..17574)
                     /locus_tag="AABD07_000411"
     CDS             complement(15622..17574)
                     /locus_tag="AABD07_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HFB2355006.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWTRIFDF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVRGFQGKTVSREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLAGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGMLVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLRDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPILQDKDYFWLTGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKGQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWRQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVFMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(17852..18475)
                     /locus_tag="AABD07_000412"
     CDS             complement(17852..18475)
                     /locus_tag="AABD07_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HFB2355007.1"
                     /translation="MRRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            18682..19311
                     /locus_tag="AABD07_000413"
     CDS             18682..19311
                     /locus_tag="AABD07_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HFB2355008.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRH
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(19431..21827)
                     /locus_tag="AABD07_000414"
     CDS             complement(19431..21827)
                     /locus_tag="AABD07_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HFB2355009.1"
                     /translation="MIKKILTTCFGLFFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRRELYE
                     KYGEDAYTQGFKVYTTVRTDHQKAATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVALDRRALGFAARAVDNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLPQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRPSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRAGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLM
                     LDNSGIAPQPSRRAKEDDEAAVENEQQGRSDETRQDVQETPVLPSNTDSKQQQLDSLF
                     "
     gene            21979..23094
                     /locus_tag="AABD07_000415"
     CDS             21979..23094
                     /locus_tag="AABD07_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HFB2355010.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIVASVPQ
                     NLATIEQLTYTAKDAELDLQGFVESSISEASSISLEEANYDYQVLSQSAVGEAVLSVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELADEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSAEQLNQLIQRTYQVTAEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAVRQKGIAQTVASQTNADVQ
                     CVHPARYFANDLKTDEQQFELDAPTLTKAFGLAVRGL"
     gene            23097..23696
                     /locus_tag="AABD07_000416"
     CDS             23097..23696
                     /locus_tag="AABD07_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HFB2355011.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQEKDAFLIKKNKIGELQIKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            23697..24344
                     /gene="pilO"
                     /locus_tag="AABD07_000417"
     CDS             23697..24344
                     /gene="pilO"
                     /locus_tag="AABD07_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HFB2355012.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLVVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKKLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            24362..24907
                     /locus_tag="AABD07_000418"
     CDS             24362..24907
                     /locus_tag="AABD07_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HFB2355013.1"
                     /translation="MKHYALLISFLALSACSQNSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            24926..27121
                     /locus_tag="AABD07_000419"
     CDS             24926..27121
                     /locus_tag="AABD07_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HFB2355014.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPFTESVV
                     SVSAPFSPAKQQAAASAKQQAATPAKQTNIDFRKDGKNAGIIELAALGFAGQPDISQQ
                     HDHIIVTLKNHTLPTALQRSLDVADFKTPVQKVTLKRLNNDTQLIITTTGNWELVNKS
                     AAPGYFTFQVLPKKQNLESGGVNNAPKTFTGRKISLDFQDVEIRTILQILAKESGMNI
                     VASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQ
                     AEKDIADLGALYSQNFQLKYKNVEEFRSILRLDNADTTGNRNTLVSGRGSVLIDPATN
                     TLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVEAADGFSRDLGVKFGATGRKKLK
                     NETSAFGWGVNSGFGGGDKWEAQTKINLPVAAAANSISLVRAISSGALNLELSASESL
                     SKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTASGGGNSTNTELKKAVLGLTVTPNI
                     TPDGQIIMTVKINKDSPAQCASGNNTILCISTKSLNTQAMVENGGTLIVGGIYEENNG
                     NTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPRIIDTAGNSLRY"
BASE COUNT         7108 a         8093 c         6755 g         6095 t
ORIGIN      
        1 ctgcggcttc gccgccttgt cctgattttt gttaatccac tataaaaaat cagatttccg
       61 ttacactttt ttctaatatt tcagacggca ttttgctcac acacccaaat aaccttccct
      121 gccggaaaac caccttgcca aatgcgcttc gacgatttca gggttttgtt caatcagcat
      181 cggggcggtt tcgcgcgctt gttccaaaag gtgtaagtct tcttcgagct tggcgaagcg
      241 cagcataggc acgccgcttt ggcgcgcgcc gagaaattcg ccggggccgc ggatgttgag
      301 gtcttggcgg gcgatttcga agccgtcggt gtgttcgtag atgactttca gccgcgcttt
      361 ggcgagttcg cccaagggtt cggcaaacag gaggacgcac acgctttccg ccgcgccgcg
      421 ccctacccgt ccgcgtaatt ggtgaagctg cgccaagccc atgcgctcgg cgtgttcgat
      481 caccatcagg gcggcgttgg gcacatctac gccgacttcg atgacggtgg tggcaaccaa
      541 gacgttcaga cggcctgcgg caaattccgc catgacttca gccttttcgg cggccttcat
      601 gcgcccgtgt accagtccga tattgggttc gggcaatgcc gtctgaagcc gggcgagggt
      661 ttcggcggcg gtttgcagtt gcagggtttc gctttcttca atcaatgggc agacccaata
      721 tgcctgccgc ccttttcggc aagtgccgag gacgaagcct tcgacttcgg cgcggcggac
      781 gttgttgacg aggcgcgttt taatcggcgt gcgcccgggc ggcaattcgt cgatgacgga
      841 tacgtccaag tcagcgaaga aactcatggc gagcgtgcgc gggatgggtg tggcggacat
      901 catcagctga tggacttcgc gccctttgtt tttgagtgcg aggcgttgtg caacgccgaa
      961 acggtgctgt tcgtccacaa tgctcaagcc caaattgtga aacgccacgc cgtctgaaaa
     1021 cagggcgtgc gtgccgacgg cgattttgac gctgccgtcg gcgagtttgg ctttggcttc
     1081 gtctttggct tttttgcgca aactgccaaa aaggcagaca acttcaatgc ccaaaggttc
     1141 gagccattgt ttgaacttga tgaagtgctg ttcggcaagg atttcagtgg gcgccattac
     1201 agccacttgc gcgcctgatt cgatggcggt cagcgcggat aaggcggcga cgatggtttt
     1261 gccgctgccg acatcgcctt gcagcaggcg gtgcatgggg tgggtttgcg ccatatcgcg
     1321 gcagatttcg gaaacaactt tttcttgtgc atcggtcagg gcaaacggca gggcttggcg
     1381 cagggcttgg gtcaatgtgc cgtcgccgcg caatgccgcc gccgtgccgc tgacgcgctt
     1441 ctgccgcgcc aaacgcatgg acaactgttg cgccaaaagt tcgtcgaatt tgagccgctg
     1501 ccacgccggc agcgtgccgt ctgaaagttg atgaatagtg aaactcggcg gcggcgaatg
     1561 caaaaggcgc aggctttcgg caaggcgcgg cagcttcaga cggcctaata aagcatcagg
     1621 caaggtgtcg tgcagcggcg taacgtccaa cgccgtctga atgatgcggc gcaaagtggg
     1681 ctggttcaaa ccgtttacgg tcgggtaaac cggcgtgagg ctttccgcca aaccgccgcc
     1741 ctcggcatcg cggattttgg gatgaatcat ctcgtcgccg taaaatccgt gtttgatttc
     1801 gcccacggcg cggatgcgtt tgccgaccgc cgtctgcttc tgatggctgg cgtaaaagtg
     1861 gatgaagcgc agaaaaagga cgctgccgga accgtcggca atttgaacaa tcagctgctt
     1921 gcgcggtttg aacgttactt cctgatggat aacctcgccc tcgacctgac acggcacgcc
     1981 aatcggcgcg tccttaatcg gcataatgtg cgtctcgtcc tcgtaacgca gcggcaggtg
     2041 caacaccaaa tcccacgcgg tatggaggtt gagtttgtcg agcttcttgg cggaaacatc
     2101 ggtgattttg agctgtttct gggtttcggg cgacatcata ggcagattcc tttggacgcg
     2161 cctattttat ccgaaaacaa aaatgccgtc tgaaacggat tcagacggca tcggcaggca
     2221 ggaatcaagc cccggcggct tcggcttcct gctgttgttg gtaaatcgct tcaaaattaa
     2281 tcggcgcaag caggacgggc gggaagccgg cgcgcgttac cgtaccggaa accgcttcgc
     2341 gcgcgtaagg gaagaggatg ttcggacacg ccacgcccaa cagcagctgc acatcttctt
     2401 cggggatgtt ttccagacgg aaaataccgc tttgggttac ttcgttcaaa aacatcgtgc
     2461 gctcgttatc caatttggcg gtaacggtta cggtaacgtc cacgtcgtag tagccgtctt
     2521 ccagcttttg actgccggtg gaaacgcgca tatccacttc gggatcgccc tgttccaaaa
     2581 agatttgcgg cgcgtgcggc acttccaaag acaagtcttt gacatacagt cgctcgatgc
     2641 tgaatacggg ttgcagttct tcgctcattt tgttttccta gttgtgggtt aagggttcag
     2701 cagtccgtcc agcccgcctt cctgctgaag gcggtagagg tcggtaaatc cgccgacgtg
     2761 cgtttcgccg atgaaaatct gcggcacgct gcgctgtccc gaaagccgct gcatttcggc
     2821 aaaggcttcg gggcttgcat cgacacggat ttcgtcgata tgtccgacac ctgccgcgtg
     2881 cagcagcctt ttcgccatcg cgcagtaggg gcaaaacgga cctgtgtaca tggtaacggt
     2941 ctgcatattg gttttccgaa agttttgcaa tgataatcaa tataggggca atcgctccgt
     3001 ttggcaagtg cggaacagat gcacgttcag acggcatgtg cggagtgtgt caaagtttct
     3061 tttttaaagt atgataggca ttgtgaaaaa tatttttgca cccgctctgc gcggcggggc
     3121 ggaacggatg caaaaatatt tttattacat tttcaggaaa aaccatgttg tcaggactcc
     3181 ccatccccaa agacatcgcg cgcccgcccg aaacgatatt ggtcaacatc acgccgcagg
     3241 aaacgcgcgt ggcggtgttg gaggaaaaca atatctgcga gctgcacatc gagcgcaaca
     3301 gcgggcacag cctggtcggc aatatctatc tgggcgtggt gcgccgcgtg ctgcccggga
     3361 tgcagagcgc gtttatcgac atcggcttgg aacgcgcggc atttttacac atcgtcgatg
     3421 tcctcgaaca acgccgcaac cccgaagaaa cccagcgcat cgaacatatg ctgtttgaag
     3481 ggcagtcggt tttggtgcag gtcatcaaag acccgatcaa caccaaaggc gcgcggcttt
     3541 ccacccaaat ctcgctggcg gggcgtttcc tcgtccacct tccgcaagaa gaccacatcg
     3601 gcgtgtccca acgcatcgaa gacgatgccg aacgcagcag cctgcgcgaa cgcctcgaca
     3661 aactcctgcc ggaaaatgcc tgccggggct acatcatccg caccaacgcc gaaaacgcca
     3721 ccgacgaaca gctccagtcc gacatcgact acctgaccaa agtgtgggaa cacatccaag
     3781 aacaggcgaa aatccggccg ccggaaaccc tgctttatca ggatttgcct ttaagcctgc
     3841 gcgtgttgcg cgatatggtc ggctgcgaca cgcagaaaat cctcgtcgat tccaccgtaa
     3901 accacgggcg catgacgcgt tttgccgaac aatacgtcca cggcgcattg ggcaggatag
     3961 aattgttcaa aggcgaacgc ccgctgtttg aaacccacaa catcgaacag gaaatcagcc
     4021 gcgccctgca accgcgcgtc aacctcaact tcggcagcta cctgattatc gagtccaccg
     4081 aagccatgac caccatcgat gtcaacaccg gcggcttcgt cggcgcgcgc aatttcgacg
     4141 aaaccatctt ccgcaccaac ctcgaagcct gccacaccat cgcccgcgaa ttaaggctgc
     4201 gcaaccttgg cggcatcatc atcatcgact tcatcgatat ggcgcaggaa agccaccgcg
     4261 aagccgtgtt gcaggagctt gccaaagccc tcgccttcga ccgtacccgc gttaccctgc
     4321 acggttttac cagcctgggg ctggtcgagc tgacgcgcaa acgctcgcgc gaaaacttaa
     4381 accaagtcct ctgcgaaccc tgcccttcct gccaaggcag gggccgcctg aaaacgccgc
     4441 aaaccgtatg ctacgaaatc cagcgcgaaa tcgtccgcga agcgcgccgt tacgatgccg
     4501 aaagtttccg catcctcgcc gcccccaacg tcatcgattt gtttttggac gaagaatcgc
     4561 aatccttggc aatgctgata gatttcatcg gcaaaccgat ttctttggcg gtcgaaaccg
     4621 cttacacgca ggaacaatac gatattgtgc tgatgtaaaa aatgccgtct gaagccttca
     4681 gacggcatct gtctatttca gggtttcctt gtccaacagc gcgcgtatca acagcccgtg
     4741 tccgaaacgt cggctgtcgg tcagttccaa atatccgccg tattttttgg ccagcgtgtc
     4801 ggcaatcgac agccccagcc ccgccccctg ctgctccgtt cccaaaatac ggtaaaacgg
     4861 atcgaggacg cgggcgcatt cggattcggg aatgccgttc ccgttatcct ccacccacac
     4921 ggcgagatat ttcccttcgt ccgtgaaacc caaatctatc ctgcccccgt tcggcgtgta
     4981 acgtaccgcg ttgtcggcaa aggttttaac cagcgtatag atttccgttt cgtcggcaga
     5041 cacttcgaca tcgcctccga ccgccacacc gatgtcctga cgtttttcca aaaccagcgg
     5101 catcagttcc tgcaacactt ggcggaaacg gctttgcaga ccgaatgtcg ttttcgtcaa
     5161 aggggtttcg tccgactgcg aacgcgccag tgccaaaagc tgttcgagca ggtgtttgtt
     5221 gcgcctgatg ctctgctgca aaacggcgga ctgccgcccc gcatcgggtg ggagcggcat
     5281 attgttgagc cgttccgcct gaagggaaag ggcagtcatc ggcgtacgca attcgtgtgc
     5341 cgcgtcggcg acaaaccgct gacggcggcg tatatcttca tcaacacgtt tcaaaagcag
     5401 attgatggcg gttacgaacc ctctgatttc actgggaata ttgtacacac tcaaagcagg
     5461 caggccgttg attcggcgtt gttcgagact ttgcgacaat ttgcggacgg ggcgcatggc
     5521 tttgtgcgta atccacacag tcagcagtat catcagcggc agtgccgcca acaggggcaa
     5581 cacgctttgc cgtgccgcat cctccgccaa atcttcacgg tattcgtttt cctgcatgac
     5641 ggcaatccgt ccctgttcgg tcgtgcggat ataggcgcgg taataatcgt cgtccccgtc
     5701 cgcccgaagc gtgtgcagac cgtccgccag atgcgcgggc aggctgacaa cagggtcttc
     5761 ctgctgcggc atctgtacca aaatacgcgt atcgccgtcg ccttcgggca aagtttcgga
     5821 tttggaatca gggccgacat acaatgccgc ctgacggagc aggtcgtcct gcaacgcttc
     5881 cgtttcgtgg aaggtttcgt agtaggaaaa catacctgca agcattgcca gcggaacaaa
     5941 catccaaatc agggcaaggc tgattctgac ctgaagcgaa tgttttaaaa ttttaaaaaa
     6001 acggtccggc atcttcgttc ctgttcagac ggcatcttga cgcggcatca gccagccgac
     6061 accgcgcaca ttttgtatgc tttccttacc caatttcttg cacagcccgt gaatcagaaa
     6121 atccaccgca ttgctttcga cttccccgcc ccaaccgtaa accttgtcct ccgaatccga
     6181 gcgcgacaaa atcacacccg gcctcgccag caaagcctgc aataccgaaa actcctggtt
     6241 gctcaatgcc acctgcctcc cctcggcaat aatttctacc tgatacgttg caggattgag
     6301 ggataacgca ccatttgaca gacacgcctg cgcctgtccg ctcccgcgcc gcaacaccgc
     6361 ccgcatccgc gccttaaact ccgccatatc gaacggcttg acgatatagt catccgcacc
     6421 gccgtccaaa ccgttcagcc ggctgtacaa atcatcccgc gccgtaacga tcagcacggg
     6481 gacggtacag cctgccgcgc gtatttccga caaaacatcc aaaccgtccc gcccaggcaa
     6541 acccaaatcc agcagcatca agtcataagg ctgggcagcg gcagccgccg caacctgcgc
     6601 gccgtttttg acccaatcca ccgcatagcc gccgtctttc aaacttgccg acaccgctta
     6661 cgcaatcatc gcattgtctt ccaccagcaa aacacgcatc aactttccct tcaaaataaa
     6721 ccgtgcctat tctaacaccc caaaattagc cgcaatttag cggcctttac gcttgccggt
     6781 atttttcaaa actgcggcac aaaaaaaccg cgccggcaac tgccttcaga cggcattggg
     6841 gcgcgattgc aacacacgga caggcaggca aagcctgcga cagatcacag gaacgattcg
     6901 ggcttcaggc ggcttcgccg tttacggcag aggcacgatt cctgccgcta tcgaactgat
     6961 caatatcgcc agcgacaaac cccacgccca gaaaaacgaa taacggatgt gtttgcccat
     7021 cgacaatttc gccaaaccca aacccatcca caaagccggc gaaagcggcg taacaaaagt
     7081 accgacgata ctgccgatca acatcgcata gcctgccgct tcgggtgcaa cgcccgcctg
     7141 cgaggtaatc tgttccacaa tcggaaacag tccgaaataa taagcgtccg tactcaaaac
     7201 caactcaagc ggaataccca acacaccgat ggcaatatgc agataaggca gcaacgcgtc
     7261 cggcaggata tgcacaaggt ctttggaaat cgcgtccaac atccccgcgc ccttcaaaat
     7321 ccccaaaaac gtacctgccg ccaaaataat ggacgccatc atcaccgcgc cgccggcgtg
     7381 ggcataaatc cgctccatct gttcctgcgg gctgcggtaa ttcaaaagca acgccgccgt
     7441 tgcagccagc ataaatacat aacccggcgg gaagatgccc gaaaaaagca ggctcatcgc
     7501 cgccaaaaac agcaggacat tccaccaaaa cagtttcgga cgcgccaatt tttgttcttc
     7561 ttccgacaaa ggcgccggct ttatcaaatc cgccacggcg ggcaacgcgc ccaactcccg
     7621 gacaatccgc cttttttcac gcacacccaa aaacagggac agcacaagga taaacaccac
     7681 accgataatt tgcaccgtca acaaaggttt atacaattcg cccacatctg cgcccaacac
     7741 gcttgcaacc cgcccgatcg gcccgccccg cggcaaaagg ttgattagcc ccgcgctgga
     7801 agtcagcagc aaaaacagca ggtaaggatt catatgcaga cgcttgtaaa gcggcaaaag
     7861 ggcggggacg accgataaaa acgtcgtcgc gcccgccccg tccaactgtg ccaccaccga
     7921 caccaagacc gtccccacac tcactgccac gatattaccc cgagtcagct taatcaaacc
     7981 gcctatcatc ggacggaaca gccccacatc gttcatgatt ccaaaaaaca aaatggaaaa
     8041 cataaacata atcacaatct gcgtcaccga tttcgtgccg cccgaataaa attcttttaa
     8101 ttgggataca tcaaaccccg ccagcaacgc cccaatcagc ggcaccaaga ttaatgcgat
     8161 gatgggcgac actttttccg tcagcaacag ccatacgatg accccgataa tcagcaatcc
     8221 gataaacgtc agcattattt ctctttattt tattttgaac ataaaaccgc ccgtgcaggc
     8281 aaaaccgcca acatatgcgg gataagcctt gcattccatt cacgcctgcc gacatttctg
     8341 catccgtccg tcatttcacg gcggcaaccg atacggaaca accggtatcg ggacggcgcg
     8401 ggggcatccg tcccggtgcg ccgattcaaa cgaaactgcc ccctatcatt gcggagcgcg
     8461 gggcgtgccg tacacgcggg attttaaaca cgccgatcat ttgccgcgca ttatccggca
     8521 aacggcaaac cttgacgctg cccggcccat ataaaaaagc cgcaaaaccc gaaccggttt
     8581 tgcggctttt cgatttggtt tgtttatttg gcatttcttt caatcaaacc gacaaactga
     8641 ttgatatatg actgaacaaa atcccttgcc gagtcaatca acttaccgtt ttcatcaaac
     8701 agcgtcggcg aattgcccaa aaatacttcc ggctgtccgg ttacgggcat atcaaaatac
     8761 gacagggcaa ggcgcaggtt tttttgggaa ctgtaaccgc ccatcttgcc gacggaatgg
     8821 ctgatgatgc cggccggttt gtttttccaa gccacgtcgg cattcggttt cgagccgatg
     8881 tccaccgcat ttttcaaaca ggcgggaatg gtgcggttgt tttcggacgt aacgaacaaa
     8941 atgccgtccg aagccttaat cgtttcgcgg aaagccgtgt agctttcggg cagcggcaca
     9001 tcttccacct cagggtcgtc ataatcgaaa ttgtaaagcg gcagatgtcc gatttcgacg
     9061 atttccgcct gccagccttc ggggaacatc tccgccgcat tcaatgccac tttgcgcgca
     9121 aacgaagcac ggcgcaggct gcccaccaaa atactgattt tcttagccac aatcattcct
     9181 cctgaatatt aagtttgtgc gtttcaatca tttcataatg gtaacgatta ttatatatgt
     9241 gatttcccct gcaaacaagc cggtccgccg ccccggcgtt cccacttatc cggctttgcc
     9301 ttataattgc tttttttatg taacagattc acctatgaat ttccccaaaa cagcggcctc
     9361 cctgctgctg cttctcgcct ccctcgccgc acacgcgctc gataccggcc gcattccgca
     9421 aaacgaaatc gctgtatatg tccaagagct tgacagcgga aaagtcatca ttgaccaccg
     9481 tgccggcata cccgtcaatc ccgcgtccac gatgaagctc gttaccgcgt ttgccgcctt
     9541 caaaaccttc ggcagcaatt accgctgggc gaccgagttt aaaagcaacg gtacggtaaa
     9601 cgacggcacg cttgacggaa acctgtattg ggcgggcagc ggcgaccccg ttttcaatca
     9661 ggaaaacctg cttgccgtcc aacgccagtt gcgcgacaaa ggcatccgca atatcacggg
     9721 gcgcctgatg ctcgaccaca gcctgtgggg cgaagtcggc agtcccgacc attttgaagc
     9781 cgacagcggt tcgccgttta tgacgccccc aaatccgact atgctgtctg ccggtatggt
     9841 tatggtgcgc gccgaacgca atgccgccgg cagtaccgac atcctcaccg atccgccttt
     9901 gccgcatatt tttgcccaaa acaacttgaa aattaccgcc tcccaagctg cctgcccttc
     9961 ggtcaaaaaa ctgatgcgcg catctttttc gggcaatacg ctgaaattgc gcggcaatat
    10021 tcccgaaagc tgtttgggca agcctgtcgg tgtccggatg ttcgcgcttg acgaactgat
    10081 ccgccaaagt tttaccaacc gctggctgct cggcggcgga cggatttcag acggcatcgg
    10141 catagccgac acaccggaag gcgcgcagac gcttgccgtt gcacacgcca aaccgatgaa
    10201 ggaaattttg acggacatga acaagcgttc ggacaatctg attgcgcgtt ccgtcttcct
    10261 caaactcggc ggcgacggca aactgcccgc cgtttccgaa caggcggcgt ctgccgtccg
    10321 gcgagaactt gccgtatcgg gcatcgatgt tgcggatttg gttttggaaa acggttcggg
    10381 tctgtccaga aaagaaaggg taacggcgag aatgatggcg caaatgttgg aaacggctta
    10441 tttcagcccg tttgcacaag atttcatcga cacgctgccc atcgccggca cagacgggac
    10501 tttacgcaac cgcttcaaac aaagcggcgg gctgttgcgc ttaaaaaccg gcacgctcaa
    10561 caatgtccgc gcccttgcag gttattggct gggcgacaaa ccgatggcgg tggtcgtcat
    10621 catcaacagc ggccgcgccg tttccctgct gcccgacttg gacaacttcg ttgccaaaaa
    10681 catcatctcc ggcggcgacg gctggctgga tgcgaaactg atgtgcaaag aacgccgcgc
    10741 ctgaatcggg aaaatataaa aatgccgcct gaactgttcg gacggcattt ttgattttca
    10801 aaccggaatt acagccccgc tgccgctttc aatgaggccg ctttgtcggt gcgctcccaa
    10861 gtaaactcgg gttcttcgcg gccgaaatgt ccgtaggcgg cagattttcc gtaaatcggg
    10921 cgcaagaggt cgagcatttg gacgatgcct ttgggacgca ggtcgaaatg ttcgcaaacc
    10981 agcgcaatca gtttttcctc gctgatttta cccgtaccga aagtatcgat ggaaatcgaa
    11041 gtcggttcgg caacgccgat ggcgtaggaa acttggattt ggcattgggt tgccaagcct
    11101 gcggcgacga tgtttttcgc cacataacgg caggcgtagg cggcggaacg gtccactttg
    11161 gacgggtctt tgccggagaa tgcgccgccg ccgtgcggag ccgcgccgcc gtaggtatcg
    11221 acaatgattt tgcggccggt caaaccgcag tcgccttgcg ggccgccgat gacgaagcgg
    11281 ccggtcgggt tgatcaggta ttttgtttcg tcggtcagca gttcgggcgg caaaacgggc
    11341 ttgataatct gctcaatcac ggctttactc agttcttcat ggctgatggc aggatcgtgc
    11401 tgggtggaca ggacgacggt atcaatgcgt ttcaccttgc cggtttcgct gtcgtaaacc
    11461 acggtcagtt gggcttttgc gtcagggcgc agccaaggca ggcggccgtc tttgcgcaat
    11521 tcgctttgac gctgcatcag gcggtggctg taatagatgg caaacggcat cagggtcggg
    11581 gtttcgtcgc aggcgtagcc gaacatcaag ccttggtcgc ccgcgccttg gttcaggtcg
    11641 atgccttcgc cttcgttcac gccttgggcg atgtcggggg attgttggtc gtagtacacg
    11701 ccgaccgcgc agccgttggc gtcaaagccc agctcggagg agttgtagcc gatgcgtttg
    11761 atggtttcgc gtgcgacttt gatgtagtcc acttgggcgg tggtggtgat ttcgcccgcc
    11821 aatacgcaca agcctgtgtt gaccaaagtt tccgccgcga cacgcgcttt ggggtcttgc
    11881 gccaagatgg catccaaaat cgcatcggat acttggtcgg ctactttgtc cggatggcct
    11941 tcggaaaccg attcggaagt aaacagatat tcgctcattg aaattttcct tgaaaaacaa
    12001 accatcttct tcagacagca tgttgtatga acataatgtc gacagcggga aatatagcaa
    12061 aatttcccta ttcgtgccat tcagttgaga aatattccta tttaaacggc gctttggaat
    12121 ctctgtccgt acgtttcgta caggcaaaaa aattcccgca tcaagcgggt ttggattgct
    12181 ccggcgagcc acatcggttt ttcaaccgtc caccttacct ttccgtttga aaagcaggtt
    12241 ggcatggaat tcccaactct taatgcagcg cgcatcgtag cagaaaaggc atattgccgc
    12301 aatacttccc tttttcagac ggcatgtttc gtttacaatt caggctgttt ccccctttgc
    12361 gaaccgccat gcacatcctg ttgaccgccc tgctcaaatg cctctccctg ctgtcgcttt
    12421 cctgtctgca cacgctggga aaccggctcg gacatctggc gttttacctt ttaaaggaag
    12481 accgcgcgcg catcgtcgcc aatatgcggc aggcgggttt gaaccccgac acgcagacgg
    12541 tcaaagccgt ttttgcggaa acggcaaaat gcggtttgga acttgccccc gcgtttttca
    12601 aaaaaccgga agacatcgaa acaatgttca aagcggtaca cggctgggaa cacgtgcagc
    12661 aggctttgga caagggcgaa gggctgctgt tcatcacgcc gcacatcggc agctacgatt
    12721 tgggcggacg ctacatcagc cagcagcttc cgttccacct gaccgccatg tacaagccgc
    12781 cgaaaatcaa agcgatagac aaaatcatgc aggcgggcag ggtgcgcggc aaaggcaaaa
    12841 ccgcgcccac cggcatacaa ggggtcaaac aaatcatcaa ggccctgcgc gcgggcgagg
    12901 caaccatcat cctgcccgac cacgtccctt ctccgcagga aggcggcggc gtgtgggcgg
    12961 attttttcgg caaacctgca tacaccatga cactggcggc aaaattggca cacgtcaaag
    13021 gcgtgaaaac cctgtttttc tgctgcgaac gcctgcccga cggacaaggc ttcgtgttgc
    13081 acatccgccc cgtccaaggg gaattgaacg gcaacaaagc ccacgatgcc gccgtgttca
    13141 accgcaatac cgaatattgg atacgccgtt ttccgacgca gtatctgttt atgtacaacc
    13201 gctataaaac gccgtaacga aaataaaaat gccgtctgaa caggtttcag acggcatctt
    13261 gtcatttgac gatttcggac aacgaccaac gcggacggac gttgaacgca ccgacctccc
    13321 tgcccttgcc caggtgcatc gcaccggcaa aggcaatcat ggcaccgttg tccgtgcagt
    13381 atgccatcgg cgggaaaaac acgctgactt tttcggacgg atgtttcggc ttgcctttgg
    13441 gggtcgggat ttgtaccgtc atgttgccga aagtttcacg gagtttgcgg tttgcaccga
    13501 ccccgccggc gaccactacg gttctgaacc ctgtctgcaa cagggctttt ttcacttttg
    13561 cctccaacac ttctactacc gcatcttgaa acgcacggca aatattgttg cgggtttgct
    13621 cgggtatggt ttccgaaccg tttgcctcac gcactttttc aacggcagtc aaaacagcgg
    13681 ttttcaatcc cgaaaaactc atctgcaaat cgtcggaatg aatcatcggg cgcggaaaaa
    13741 caaacgcttc gggcctgccc gattccgcaa gttccgacag tttcgcaccg cccggatacg
    13801 gcaaacccag cagtttcgcc gttttgtcga atgcctcgcc cgccgcatca tcgacgctct
    13861 cgcccaaaag ctcgtaatcg cctatgcccc tgaccgccat aatctgcgta tgcccgcccg
    13921 aaaccaacag cgcgacaaaa ggaaagtcgg gtttttcctc cgccaacagc ggcgacagca
    13981 gatgtccttc caaatgatgg acggggatga cgggcttatc caacgctaaa gccagcgcgt
    14041 tggcgtagct cgaacccgcc agcagcgcac cgcccaaacc gggcccctgc gtaaaggcaa
    14101 ccgcgtcaat atcgccatac gatgcgcctg cctgcgccaa acagccttca gtcaacggaa
    14161 caaggcggcg gatatggtcg cggctcgcca attccggcac gaccccgccg tattccgcgt
    14221 gcattgccat ttgagtgtgc aggcagtgcg accgcaatcc tcgttcggtg tcgtacagcg
    14281 caacgccggt ttcgtcgcaa gaagattcga ttcctaatac caacatggtc tgatgccgtt
    14341 aaaaactgaa aaacgtattc tagcgaattt cggcacgact gccgtatccc caaaacggaa
    14401 catgccgtct gaagcccttc agacggcatc gtcgcaccgt atcaaagcgt tccgtaagaa
    14461 tgcagcccgc tcaaaaacat attcacgccg ataaaggcga atgcggttac gaacaaaccg
    14521 ataatcgccc accacgccag cactttgccg cgccagcccg ccaccagccg caaatgcagc
    14581 cacacggcgt aattcaacca aacgatgaac gcccaagtct ctttcggatc ccagctccaa
    14641 tagcgtcccc aagcgtccgc cgcccacaac gcgcccaaaa tggtggcaat ggtaaagaac
    14701 aaaaagccga cggcaatcgc cttatacatc acctcgtcga tcaatgccga cggcggcagc
    14761 cacagttttc cgcctttttc ttccgcacgc agggaaacca gttcggcaat accgagcatc
    14821 gcggaaatgc agaacgcgcc gtaaccgata aagtttgccg gaacgtggat tttcatccac
    14881 caggactgga gcgcgggaat cagcggctgg atggtatgcg cctcacgcga cacgctgtac
    14941 cacaacacaa agccgaccac gaccgccata aagccgaaca cgaagccgcc caatttctgc
    15001 acggcaaatt taccctcgta atacaaatac atcagcgcgg taatgaccaa aaacagaatg
    15061 aacacttcat aaaggttgga cacggggata tgccctgcat cgggacggag cagatagctt
    15121 tcgtgccaac gtaccagcag accggtaaag cctgctacgg cagacaccca tgcaaacacg
    15181 gttcccatac ccaacagcgt gttggtcggc acatttttta cgcttgccaa aaccgcgccc
    15241 gaaatatagg cgaacagggc gaagaagaca aaagcacact gccacatgat cgccgattgg
    15301 ctgctgagga aataccgcaa caggaaaatc tctgccgatt taatgttgcc gccatacaga
    15361 ccgacggcgg cataggcaag caatacgctt aaaggaacaa accagcgcat cggtttgaaa
    15421 aaccaaccca aaaacacggc aataccggca ctcgcccaca acatgaccgt ttcgtaaatg
    15481 tccatatgca taccggaacg ggtctgcacg aaaaccgtag ccgcaaaaac cagcacggca
    15541 aatacccaat cccaaagatt cagattgcgg atcaaagatt tctgaatcag cagctcgtgt
    15601 tccggaaggg ttttatagtg ttcagtcatg attcaagtcc ttgccgagcc gttgcaggct
    15661 ctcgacgtgt tttggaaatt ccttctgcaa atcccgttcg ctgcgggccg aagacatagc
    15721 aaaacggatt ttgccgtctg aaaacaatac ccacgcccgt ttttcgcgca cataaaacat
    15781 aaataccgta cccaaaacca acaataccga gccgagatag accaaaagcg cacccggcga
    15841 acgggtcatc tgcaaacctg aggaacgcac ctcggaaaac ccgtcaagct ggagcagcat
    15901 gggcgcggga tattccgtca gccccgtata ggcatccata ctgtgcagca ggaaacggtt
    15961 ccgcgcttca tcctgccgcc attcgggcaa gccgtaccgg cgtatggttt catccaaagc
    16021 agcgttcatc acgccgtaaa gcatttcgta gaaatagccc tgcatcttat cctgctgccc
    16081 tttcgggata ttggacgtaa taaattcgtc caatcccaaa tagccttttt gcgcaaagat
    16141 attcagcgtg ttttccgcag ccagcatgaa ttgttcgcgg atttcggcag gtgcgtcttt
    16201 ggttgcgtcg gcaaccagac gtttgcgccc ttccccatct ttcaaaaact cacgcaatgc
    16261 cataaaggtg tccgctttca actgcttgtc caaggggata cgcagccagc ggtattgctg
    16321 ctgcaagccg ctgcgcgtgc cggtcagcca aaaataatct ttgtcctgca aaatcggcag
    16381 catatagttt ttatattcga ccgcctgccc tgccgcatca cggatgcggt acacgatgga
    16441 agggccgata ttggtgtatt ttttaccttc ctgagtaacg gcgcggacat cgttcagagt
    16501 ggatttcagg cttttttccc gttccgcacc ctcgctcatg tcctccacat tcatagaagt
    16561 gaactgatcg aactcaagac gatatttgtg tttgccgatt tccaacggaa actggtgtat
    16621 ggaggttgcc ttcaacacga caggttcgcg cgaagcatcc ctcaaattcc acgccttgaa
    16681 tgtcaaatcc gaaccgccgt cggcaaaact cgcctgataa atcgtgatgc cgtgcaaggt
    16741 caaaggatgg ttcacgcgga tggtgcgctc gagtttctca ccggttgcct tgtccgttac
    16801 ttcaatatcg ctggcaaaat cgcgcggcat acccgtattg taaaaatcga tatggaattt
    16861 tttcagtttg acttcaaaag gcaagtcctg aaccaacatc ccgttgtcgg cattcaggaa
    16921 aaccacatcc gcactttgcc cctcggaaat attgacgttg cccctaaatg agagattgga
    16981 cgcacccaaa atactttcgg gcttgaaatc cttggcataa accgcctgat tgtccggaac
    17041 aatccgaccg gccagcatac ccagcttcag cagcaggtta ctgtctatca acccgcccag
    17101 gcaaatgaca atcaaagcaa catgggcaaa gatatagccc catttgttca tcgtgccttt
    17161 tttggcggca atcagaaccg acccgtcctc acggctgacg gtttttccct gaaaaccccg
    17221 cacctccaga taacgtttgg caacttcggg ggcaattttt acatccaaca gcgaagaatg
    17281 gcgcatcgcc gccagagatt tttctttaac cttttcccgg aaagacttca tttcgcgcca
    17341 aaacggcgga acgttacgga ttaaacacaa actggtagaa accaccagaa acatcatgat
    17401 aacgacaaac catgccgaag catagacatc gtacaaaccc aaaaaatcaa aaatccgagt
    17461 ccaaaacggt ccgaatttga ccaaataatc cgtctgcggc tggttttgct gtaacaccgt
    17521 gccgataacc gatgcaatac ccagcagact gagcaaagcg accgcaaagc gcatggagct
    17581 gaaaaaagcg aaccacggac gggaaagaag tgtgggggat atacgggatt tactcattgt
    17641 gtgtttattc cgccatcagg aatatgggaa agcagaattg ggcagacaga aaacaacgtc
    17701 ccgattctac tgtcttgatg ctttttattt caagacaatg aagacagcct gcatcgattc
    17761 caacggttgc gattgaaaaa acttatcgca aaattttcag aagccgtctg aaaacctttt
    17821 cagacggctt ctgaagcaga cccttggatg attaacgcaa accctggata aagttagcaa
    17881 ctgcttttaa atcttcttcg gacatacggt ttgcaatatc ttccatgatg gtatttttac
    17941 gctgaccgga cttgtaggca ttcatctgtt caacaatata tgcctggtgc tggccgccca
    18001 aacgcggata agcctgaatt tcgcttccgc ctcccggcat acccgcaccg ctcggaccgt
    18061 ggcaggacat acacgccggc acttttttat cgctcaaacc gccgcgatag attttcgcgc
    18121 ccaattcggg attttcctta ggattggctt cgccggattt gggctgctgt ttggcataga
    18181 atgcggatac gttcaaaata tcctgatcgc tcaaattcat taccaccggt ttcatcacag
    18241 ctgccgaacc gtgggtgcgt ttgccgtcgc ggatgccgat agtttgatga tagatgtaag
    18301 cagtatgctg tgccgccaaa cgcggataca tcgcaatgcc gctgttaccg tctgctgcat
    18361 ggcaagccgc acaaaccgtt gcggcaacct gtttgccttt ttccacgtct gctttgggag
    18421 atgcggaaac cgcaccggca gccaaaacaa aggccaataa agtcaatcgt ctcatggagt
    18481 gctcctgatt acagcattgg ataacgcaac aatgctcttt tttatattca aatatgggat
    18541 ttttgacccg attaaaaccg atgattctgt aaacgtgtta ttctatacta aatttacatt
    18601 aaattaccac tgtgtttcac ataaaaccaa ccgcatattt ttgctgtcgg acaaacggcg
    18661 gcggaaaaca aggatatgcc catgaacctt tttcaaaacg ccaaattctt cacgacggta
    18721 aaccatctca aagacctgcc ggacacaccg ctcgaaattg cctttgtcgg caggagcaat
    18781 gccggaaaat ccagtgccat caataccctg accaaccatg tccgtcttgc ctacgtttca
    18841 aaaacaccgg gacggacaca gcatatcaac ttcttcgagc tgcagaacgg caattttatg
    18901 gtcgatttgc ccggctacgg ttatgcccaa gtccccgaag cggtacgcgc acattgggtc
    18961 aatctgctcg gcgactacct ccgccatcgg aaacagctta tcgggctggt tttgattatg
    19021 gatgcccgcc atcctttaaa agaactcgac atccgtatgc tggacttttt ccacacgacc
    19081 ggcagaccgg ttcacatcct gctgtcaaaa gccgacaaat tatccaaaaa cgaacagata
    19141 aaaaccctgt cccaagtcaa aaaactgctc aaaccttatt ccgacaggca aaacatcagc
    19201 gtacagctgt tttccagcct gaaaaaacaa ggtattgacg aggccaaccg aactgtcgga
    19261 agctggtttg acgcagcaga tgccgccgct tcctctccag aggaaaactg acctcaatta
    19321 tacggaaacc gtatcccccc acttgaccgg ccgcaaacat ttaaaaaatt gccactgcca
    19381 aatctaaaat gccgtctgaa agacttttca gacggcattt tgcggagtct ttaaaacagg
    19441 gaatccaact gctgctgttt ggaatccgta ttgctcggaa gcaccggcgt ttcctgtacg
    19501 tcctgacgcg tttcgtcaga ccttccctgc tgttcgtttt ctactgccgc ttcatcatct
    19561 tcttttgccc gtcgggaagg ttgcggcgca ataccgctgt tgtccagcat caagcccgga
    19621 tcggttacca tacgttcctt catatagtat tcgccattgc tgctgaccac accttcaggc
    19681 attttcatcc ctttgccctg ctttcctttc aacgcaaaac gcatatagtc cacccaaacc
    19741 ggcaccgcaa tcgtaccgcc gtagccggca cgccccatac tcttaggttt gtcgaagccg
    19801 atatatacgg cagtaaccac atcagggtta aaaccgacaa accacgcatc tttattgtcg
    19861 ttggtcgtac ccgttttacc ggcaatatcc gttcttccca acgcagctgc cccccttgcc
    19921 gtaccgacac ggaccacatc ctgcataatc ttatacataa tataggcatt gcgcggatcg
    19981 attgcctgag gcgcattttg ccctgccacc aaaggttgca tttgggcgcg caacctgccg
    20041 tctctgtcat aaatcttatc gatcacgtgc gaagaaaccc tatatccgcc gttcgcaaat
    20101 acactatatg cctccgccac tttcaacggc gtcgtctcgc ccgtacctaa agccatagac
    20161 aggcttgccg gcagctcgga cggcctgaag ccgaaacgcc ggatatactg ttgcgcgtaa
    20221 ccgacaccga tagacatcaa aatacggatg gaaaccatat tcttggaagc cgtcagagcc
    20281 tgtctcaaag taatgtagcc ggaatatctg ccgtctgaat ttttaggtgt ccaaaccgaa
    20341 ccgttcggcc ctttccccgg cagggaaatc ggcgcatcgt taaccactgt ggacgcggtc
    20401 atccccttag ataatgccgc cgaatagaca aacggcttaa aggtcgaacc cggctgccgc
    20461 attgcctgaa cggcacgatt gaatgttttg ctgtgaaaat cataaccgcc gaccagcgcg
    20521 cgcacagctc cggtttttgc atccagcgaa accaaagccc cctgcggcaa cggctcttga
    20581 accaccgccc aacgcccgcc gttgtttttg acacggatga ccgcgcccct gcggatacgg
    20641 tcctccccca ttttctcatt atcgaccgct cgggccgcaa aacccaaggc gcgcctgtca
    20701 agcgcaaccc gcctgccgcc gggcagctgt atgacgacat ttttcttttt agtaacatcc
    20761 aacacaacgg cgggaaccat tttatcgacg gtatagagtc ccgacagata ctggctgaca
    20821 gtctcctcga catcttcact cttactcaaa tcgatatagt tttccgcacc gcggtagctg
    20881 ctgccgcgat cgaaattccg tagagccttg cgcaatgcct cggttgccgc cttctgatga
    20941 tcggtgcgga ccgtggtata aaccttaaaa ccctgcgtat aggcatcttc accatatttc
    21001 tcatacagtt cccgacgcac catttccgcc acatataaag cactctgatc gattttccga
    21061 acaaaccgct cataatgcag ttcctcattc aatgcctgat cgcgctgttg cacggtaatc
    21121 atcttctcct cgagcatatt gttcaaaata tacttctggc gcaacttggc acgctccgga
    21181 ttaacaatcg gattataggc agacggagcc ttgggcagtc ccgcaagcat ggcggcttcc
    21241 gccaaagtca aatctcggac attcttattg aaatagattt gcgcggcaga tgcaaaacca
    21301 taggcgcgct gaccgaggta aatctgattg aaatacaact caaggatttt gtctttgctt
    21361 aaagactgct cgattttata ggcaagcaac acctcattga atttgcgtgt gaacgttttt
    21421 tcactgctca aataaaaatt tttcgccacc tgctgtgtaa tcgtactcgc acccgactgc
    21481 acgctgccgg acacgacatt gccgacggca gcgcgggcaa caccccaaac atccaccccc
    21541 caatgccggt aaaagcgttt atcctcggcg gcaataaccg cattccgcaa cacctcgggg
    21601 aaatcgccga tttttgtaaa ttcgcgccgc tgctccccat acataccgat gacttctcca
    21661 tccgccgaat aaatagtcaa cggcatttta ggctggtaat gctgcaaaga atccaaagac
    21721 ggcagtttcg gatacgttac caaaatagca atggcaacca gacccactcc aaatacacaa
    21781 aaaccaaaaa acaaaccaaa acaagtagtt aaaatctttt taatcatagc tgaataataa
    21841 tttaccatta ttggtattaa ataaagtaaa atagcaaccg atttctacaa agcacggttt
    21901 caatgtgcaa agaacaagga atccattacg gataccgaaa cggttactca ctgtacaaat
    21961 aaagcaggaa ctttcatcat gcgcttgttt aaaagcttga aaaaccctaa aaaaacagat
    22021 gccaagctcc ctaaaaaatc ttcgggactc aataaccgcg cggcaatcgg catcgatatc
    22081 gaccagcatt ccatcaaaat ggtacaattg tcaggacgta gtttaaacca aattcaattg
    22141 gaaaaatacg tcattgccaa attaccaaag aatatcattc aaggcaataa agtccaaaat
    22201 tacgatcaac ttgttacata tttgcaacaa gcctatgcca aactgggtac ttcgtgcaaa
    22261 aacatcgtcg cgtccgtccc gcaaaatctg gcaaccatcg aacaattgac ctacacggcc
    22321 aaagatgcag aattggacct gcaggggttc gtggagtcct ccatctccga agccagctcg
    22381 atatcgctcg aagaagccaa ttacgactat caggtcttgt cccaatcggc cgtcggcgaa
    22441 gctgttttgt ccgtcgcatc gagaaaggat gaaatcgaac ccctgattga cgcattcaac
    22501 gcagccggta tgaaattatc cgcgcttgat gtggacattt tcggacaata caacgcctac
    22561 gcgctgtgga taaaccattt tgcccccgag cttgcggacg aaaaagtggc cattttcggc
    22621 gtatatgccg cacagaccta cgccctggtc atccaagacg gaaaaatcct atacaaacag
    22681 gaaacctccg tcagcgcaga acagctcaac caactcatcc agcgcaccta tcaggtaaca
    22741 gcagaaaaag cggaagagat catcaactcc ccgcaaaaac cttccgatta ccaagaaagc
    22801 gtggcaaact atttcaacca gcagattacc caagaaatac aaagggtctt gcagttttat
    22861 tacaccacgc agaccgcaga cgatatgacc gacatcaagc atatcctgct gacgggggaa
    22921 gcggtgcgcc agaaaggcat cgcccaaacc gtcgcctcgc aaaccaatgc ggatgtacaa
    22981 tgcgtccatc ccgcgcgtta ttttgcgaac gacctcaaaa cagacgaaca acaattcgaa
    23041 cttgatgcgc cgacactgac caaggcgttc ggtttggcgg tacggggatt ataattatga
    23101 acaatttaat caaaatcaac ctcctcccct acagggaaga gatgaacaaa cgcaaacagc
    23161 agcagtttaa aacgctgatg tacggcgccg tgctgacggg cgttgccgcc gttgcggcaa
    23221 cctacctgtt tatcgacaat atgatcaata aacagtcgga aaaaaacacg ctgctggaaa
    23281 tctccatcgc acacttggat accgagctgt cggaaataca aaagctcaaa caggaaaaag
    23341 atgccttcct gattaagaaa aacaaaatcg gggagctcca gatcaaacgc ctccaagccg
    23401 caaaaatcct cgacagcctg aatgaggccg tccccggaag cacctaccta acctcgctgg
    23461 atgccgttac cgccgactct tatcggctca gcggcaggac atccagcgac aaccgcgttg
    23521 ccgccatgat gagggcgatg cccaataccg gcatattcaa gcaacccgaa ttgttaagca
    23581 tcaagaaaaa caattcgcat caagaattta cccttcaggc aacattacaa cctatcgtaa
    23641 aggcggccga atccaaagag aatccggctt cgggaaacgc acaggaggca aactgaatgg
    23701 cttctaaatc atctaaaacc aacttggatc tcaacaacct tcacctgctc aaccttcctg
    23761 ccaggctttt tatcgccctg ctggtcgttg ccgccgtgct ggggctcggt tatgccggat
    23821 tgttcaaaag ccagatggaa tcccttgagg aatatgaagc aaaagaaacc gaactgaaaa
    23881 acacctacaa acagaaaagt atcgacgcgg ccagcctgaa caaccttagg gacgaacttg
    23941 cctcaatccg ctctgccttc gatatcatgt tgaaacagct gccgacagat gcagaaattc
    24001 ccaatttggt tcaagagctt catcaggcgg gttcgagcaa cggtctgcgc ttggacagcg
    24061 ttatgcccca acctcccgta gatgacggtc ccatcaaaaa attaccctat tccatttcca
    24121 ttaccggaaa ttacgaacag atcagccaat ttacccgcga tgtcggcagt ctctcccgaa
    24181 tcattaccct tgagtcgctg aaaatcgccc aatctccgga aaacggcggc aatcctgacg
    24241 gcaagagcag tatcctgaac ctcagcgcca ttgccaccac ctaccaagca aaatccgtag
    24301 aagagcttgc cgcagaagcg gcacaaaatg ccgagcaaaa ataacttacg ttagggaaac
    24361 catgaaacac tatgccttac tcatcagctt tctggctctc tccgcgtgtt cccaaaattc
    24421 tgaagaccta aacgaatgga tggcacaaac gcgacgcgaa gccaaagcag aaatcatacc
    24481 tttccaagca cctaccctgc cggttgcgcc ggtatacagc ccgccgcagc ttacagggcc
    24541 gaacgcattc gacttccgcc gcatggaaac cgccaaaaaa ggggaaaatg cccccgacac
    24601 caagcgtatt aaagaaacgc tggaaaaatt cagtttggaa aatatgcgtt atgtcggcat
    24661 tttgaagtcc ggacagaaag tctccggctt catcgaggct gaaggttatg tctacactgt
    24721 cggtgtcggc aactatttgg gacaaaacta cggtagaatc gaaagcatta ccgacgacag
    24781 catcatcctg aacgagctga tagaagacag cacgggcaac tgggtttccc gtaaagcaga
    24841 actgctgttg aattcttccg acaaaaacac cgaacaagcg gcagcacctg ccgcagaaca
    24901 aaattaagaa gaggattact ccattatgaa taccaaactg acaaaaatca tttccggtct
    24961 ctttgtcgca accgccgcct ttcagacggc atcggcagga aacattacag acatcaaagt
    25021 ttcctccctg cccaacaaac agaaaatcgt caaagtcagc tttgacaaag agattgtcaa
    25081 cccgaccggc ttcgtaacct cctcaccggc ccgcatcgcc ttggactttg aacaaaccgg
    25141 catttccatg gatcaacagg tactcgaata tgccgatcct ctgttgagca aaatcagtgc
    25201 cgcacaaaac agcagccgtg cgcgtctggt tctgaatttg aacaaaccgg gccaatacaa
    25261 taccgaagta cgcgggaaca aagtttggat attcattaac gaatcggacg ataccgtgtc
    25321 cgcccccgcc cgcccagccg taaaagccgc gcctgccgca ccggcaaaac aacaggctgc
    25381 cgcaccgttt accgagtccg tagtatccgt atccgcaccg ttcagcccgg caaaacaaca
    25441 ggcagcggca tcggcaaaac aacaggcggc gacaccggca aaacaaacca atatcgattt
    25501 ccgcaaagac ggcaaaaatg ccggcattat cgaattggcg gcattgggct ttgccgggca
    25561 gcccgacatc agccaacagc acgaccacat catcgttacg ctgaaaaacc ataccctgcc
    25621 gaccgcgctc caacgcagtt tggatgtggc agacttcaaa acaccggttc aaaaggttac
    25681 gctgaaacgc ctcaataacg acacccagct gattatcaca acaaccggca actgggaact
    25741 cgtcaacaaa tccgccgcgc ccggatactt taccttccaa gtcctgccga aaaaacaaaa
    25801 cctcgagtca ggcggcgtga acaatgcgcc caaaaccttc acaggccgga aaatctccct
    25861 tgacttccaa gatgtcgaaa tccgcaccat cctgcagatt ttggcaaaag aatccgggat
    25921 gaacattgtt gccagcgact ccgtcaacgg caaaatgacc ctctccctca aagatgtgcc
    25981 ttgggatcag gctttggatt tggttatgca ggcgcgcaac ctcgatatgc gccagcaagg
    26041 gaacatcgtc aacatcgcgc cccgcgacga gctgcttgcc aaagacaaag ccttcttaca
    26101 agcggaaaaa gacattgccg atctgggcgc gctgtattcc caaaacttcc aattgaaata
    26161 caaaaatgtg gaagaattcc gcagcatcct gcgtttggac aatgccgaca cgaccggaaa
    26221 ccgcaacacg cttgtcagcg gcaggggcag cgtgctgatc gatcccgcca ccaacaccct
    26281 gattgttacc gatacccgca gcgtcatcga aaaattccgc aaactgattg acgaattgga
    26341 cgtacccgcg caacaagtga tgattgaggc gcgtatcgtc gaagcggcag acggcttctc
    26401 gcgcgatttg ggcgttaagt tcggcgcgac aggcaggaaa aaactgaaaa atgagacgag
    26461 cgcattcggc tggggcgtga actccggctt cgggggcggc gataaatggg aggcccaaac
    26521 caaaatcaac ctgccggttg ccgctgccgc aaacagcatt tcgctggtgc gcgcgatttc
    26581 ctccggcgcg ttgaatttgg aattgtccgc atccgagtcg ctttcaaaaa ccaaaacgct
    26641 tgccaatccg cgcgtgctga cccaaaaccg caaagaggcc aaaatcgaat ccggttacga
    26701 aattcctttt accgtaacta cagcctcggg cggcggcaac tctaccaaca cggaactcaa
    26761 aaaagccgtc ttggggctga ccgttacgcc gaacatcacg cccgacggac aaatcatcat
    26821 gaccgtcaaa atcaacaaag actcgcctgc acaatgtgct tcaggcaaca acacaatcct
    26881 atgtatttcg accaaaagcc tgaatacgca ggctatggtt gaaaacggcg gcactttgat
    26941 tgtcggcggt atttatgaag aaaacaacgg caatacgctg accaaagtcc ccctgttggg
    27001 cgacatcccc gttatcggca acctctttaa aacacgcggg aaaaaaaccg accgccgcga
    27061 actgctgatt ttcattaccc cgaggattat agatacggcc ggcaacagcc tgcgctattg
    27121 atgcgtcaaa ataagggcat atgttttaca gcatatgccc tttctttatg ctttttgccg
    27181 cgaccgaaat gccgtcattc ccgcgcaggc gggaatccaa cttgtccggt ttcggttgtt
    27241 tttcgtctcg taacttttga gccgtcattc ccgcgaaatc ggaaatccag tccgttcagt
    27301 ttcggtcatt tccgataaat tcctgttgct tttcatttct agattcccac ttttgtggga
    27361 atgacggcgg aagggataaa tcctcgcaat ccaaagcctc gtcatttcca caaaaaacag
    27421 caacccgaaa caccccgtca ttcccgagca ggcgggaatc taggtcttta aacttcggtt
    27481 tttttccgat aaattcttgc ctcattgaaa ttctagattc ccgctttcgc gggaatgacg
    27541 ggatatgggt ttccgtgcgg acgtgttcgg atttccgcct gcgcgggaat gacgattcgg
    27601 gtattactga cgattcatcg ggccgtaggg tgggcttcag cccaccaatt tcaccgcatc
    27661 aagggttttg gggaataggc gtaactcggc ggtttcggtt tttggcgaag ttggttggaa
    27721 tcggcgggct gaagcacacc ctacagtcca ccctacaacc catcttacgc atctgcctta
    27781 cgcatttatc cttcgcctgc cgatatgccg tcattcccgc acaggcggga atctagaacc
    27841 gcaacgcggc aggaatctgt cggatacggc tgaaaccgaa cggactggat tcccgcctgc
    27901 gcgggaatga cggctgcaga tgcccgacgg tctttatagc ggattaacaa aaatcaggac
    27961 aaggcggcga agccgcagac agtacggata gtacggaacc gattcgcccg gtgcttcatc
    28021 accttaggga atcgttctct ttgagccggg g
//
LOCUS       DAWXHA010000012        27954 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.012, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000012 DAWXHA010000000
VERSION     DAWXHA010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27954
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.012"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            752..1144
                     /locus_tag="AABD07_000420"
     CDS             752..1144
                     /locus_tag="AABD07_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355015.1"
                     /translation="MQKKRHSRRHLFIPTSSKHISGLNIHSIPVLKGTGSHSVKKSGM
                     SSAQQANYPQNLFPTKNNPQVCTKGNPPYRHPFKTAIQMILKIKKSYPQKIPHINIII
                     VLLFKPYILFITLQGNGTAKRKGIFSKN"
     gene            1224..2672
                     /gene="gnd"
                     /locus_tag="AABD07_000421"
     CDS             1224..2672
                     /gene="gnd"
                     /locus_tag="AABD07_000421"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HFB2355016.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKETGIIGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFVEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAGKGILFVGAGVSGGEEGARRGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGKDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLAEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTATPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLGNIRDAYEANPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2735..4006
                     /locus_tag="AABD07_000422"
     CDS             2735..4006
                     /locus_tag="AABD07_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HFB2355017.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPHP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRRRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMKECRRAGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEDMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLAVVPRHPEHFQTTFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVGSGCQNII
                     EPLSCGVTTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKNLSGEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            4047..4496
                     /locus_tag="AABD07_000423"
     CDS             4047..4496
                     /locus_tag="AABD07_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HFB2355018.1"
                     /translation="MSIYAVAHIIHLYCATAFVGGVFFEVLVLSVLHTGRVSREARRE
                     VEKAMSYRAVRVMPFAVGLLFASGIVMAANRYLPISGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            4529..5503
                     /locus_tag="AABD07_000424"
     CDS             4529..5503
                     /locus_tag="AABD07_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HFB2355019.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGIKET
                     LAWSGLWVAVSCLFAGWLYFELAGNPGYGAAAAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEEDLANSRLLNAVKKVVPVGTAFHGEKFFTVENGKKIATPLFLVLIMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            5572..5647
                     /locus_tag="AABD07_000425"
     tRNA            5572..5647
                     /locus_tag="AABD07_000425"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5605..5607,aa:Lys,seq:ttt)
     gene            5868..7121
                     /gene="murA"
                     /locus_tag="AABD07_000426"
     CDS             5868..7121
                     /gene="murA"
                     /locus_tag="AABD07_000426"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HFB2355020.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVATTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVNQHLKGLEAMGAEIAIEHGYVKAKGKLKGARVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGA
                     GELYGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVERIY
                     HLDRGYENIEKKLGSVGANIERVSG"
     gene            7202..8395
                     /locus_tag="AABD07_000427"
     CDS             7202..8395
                     /locus_tag="AABD07_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HFB2355021.1"
                     /translation="MAFLKLTEQNVRGKTVLIRADMNVPFKGGKISDDTRIRASLASV
                     KYCLDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYAALCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALEKTRR
                     VNGLI"
     gene            complement(8447..8695)
                     /locus_tag="AABD07_000428"
     CDS             complement(8447..8695)
                     /locus_tag="AABD07_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HFB2355022.1"
                     /translation="MLTPEQVKALIAGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(8788..9705)
                     /gene="ftsX"
                     /locus_tag="AABD07_000429"
     CDS             complement(8788..9705)
                     /gene="ftsX"
                     /locus_tag="AABD07_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HFB2355023.1"
                     /translation="MSIIHYFSLHVESARSALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLTRDKRLDNIRFIGKEDG
                     LAELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSIFSAAVSLGLCGWLLSAVHPLVDAIFKPYGLNIGWRFFYVGELG
                     LVFGFVIALGVFGAWLATTQHLLCFKAKK"
     gene            complement(9702..10352)
                     /locus_tag="AABD07_000430"
     CDS             complement(9702..10352)
                     /locus_tag="AABD07_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HFB2355024.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSMGKVLFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILNDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(10546..11028)
                     /locus_tag="AABD07_000431"
     CDS             complement(10546..11028)
                     /locus_tag="AABD07_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HFB2355025.1"
                     /translation="MKRLNLAAIALAATFAAHTASADELAGWKDNTPQNLQSLKAPVR
                     IANLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKSYGNNVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            11152..11505
                     /gene="arsC"
                     /locus_tag="AABD07_000432"
     CDS             11152..11505
                     /gene="arsC"
                     /locus_tag="AABD07_000432"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HFB2355026.1"
                     /translation="MSEIKIFHNPRCSKSRAAVSLLEERGIAAEAVKYLDTPPDLSEL
                     KDIFNKLGLESARGMMRVKDDLYKELGLDNPDLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            11502..12158
                     /locus_tag="AABD07_000433"
     CDS             11502..12158
                     /locus_tag="AABD07_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HFB2355027.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            12274..13668
                     /locus_tag="AABD07_000434"
     CDS             12274..13668
                     /locus_tag="AABD07_000434"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HFB2355028.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNADNVVYQTRRFDRYKEVIAELLAKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCAVVDDYDMGVTHIIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTTEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPDGKLTELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAERLEGLEDWNAKAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALISKEEVLKRIRA"
     gene            13689..14084
                     /locus_tag="AABD07_000435"
     CDS             13689..14084
                     /locus_tag="AABD07_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355029.1"
                     /translation="MPSDVGMRLQTAFRRKLNMKKILYFLMFVFSTSVWAGGAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQAAQADIARLEAEIPAAMAQKARQ
                     AEEMRQIGVRLDHAWNAVYGAGERKRRGN"
     gene            14088..14579
                     /locus_tag="AABD07_000436"
     CDS             14088..14579
                     /locus_tag="AABD07_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFB2355030.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIR
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSAAVKRHDMENFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDV
                     DKV"
     gene            complement(14855..17449)
                     /gene="mutS"
                     /locus_tag="AABD07_000437"
     CDS             complement(14855..17449)
                     /gene="mutS"
                     /locus_tag="AABD07_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HFB2355031.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYELFLDDAVEAA
                     KLLDITLTTRGQMDGVPIKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTADK
                     LNDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDSKEHAVSIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRARQEAVTALESQYEPL
                     QCHLKSIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSATGSSLLETLKAVFP
                     ETLPVAETLKAAVMPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQDQALALEKQLFDGVLKNLRTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVVHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSI
                     VLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGRDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKAAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVDCFVDKAEEKHFEGILAAALENLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            17880..18884
                     /gene="gap"
                     /locus_tag="AABD07_000438"
     CDS             17880..18884
                     /gene="gap"
                     /locus_tag="AABD07_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFB2355032.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHGIEVAAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGREIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPATKEEINAAMKAASSESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(19036..19716)
                     /gene="tsaA"
                     /locus_tag="AABD07_000439"
     CDS             complement(19036..19716)
                     /gene="tsaA"
                     /locus_tag="AABD07_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HFB2355033.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEACIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGSDLLDGTPIVDIKPYIPFIESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     INLSPTPL"
     gene            19981..20163
                     /locus_tag="AABD07_000440"
     CDS             19981..20163
                     /locus_tag="AABD07_000440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355034.1"
                     /translation="MRSEILGNKIGLQLLARSTLGIAKMEEVDMTYHIHLDGLCSLNK
                     EGKSFVIRKIENDDLK"
     gene            20176..20802
                     /locus_tag="AABD07_000441"
     CDS             20176..20802
                     /locus_tag="AABD07_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HFB2355035.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMAAKWLVGNPVDMLKPTGLSDADLTWVAHAMVGTRGYELLDGLPSVKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTNMVIVGGLATDYCVKTTVLQL
                     LKGGRWQVIVNEAACRGIAPDTIEAAWQEMRSSGAIILKNAEKIKKIY"
     gene            20849..21817
                     /gene="waaC"
                     /locus_tag="AABD07_000442"
     CDS             20849..21817
                     /gene="waaC"
                     /locus_tag="AABD07_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HFB2355036.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCSDVELHWLCEAGFAGI
                     ARLHPFVKKVHVMKWRQWRKHLFQAETWREMGRLKQALLQEAFDFVLDSQGLIKSACF
                     AKMAKSPIYGLDKHSAREGVAALAYDKKYVVPKGRNAVWRNRDLFAQVFGYAMPETQV
                     FGLSVPEASRLKNLAQPYYAALHATSRDSKLWPMENWRELLQKLNQKQQCNVYLPWGN
                     EAEKVRAEQIADGLPFTIVCAKMNLLQAAYLLKHAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSAIAKNVGNIGQIPTADLVYQTLMDCVSADKG"
     gene            22043..22792
                     /locus_tag="AABD07_000443"
     CDS             22043..22792
                     /locus_tag="AABD07_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HFB2355037.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHIETDVKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFVSKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLDSADLATDISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            22803..23738
                     /locus_tag="AABD07_000444"
     CDS             22803..23738
                     /locus_tag="AABD07_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HFB2355038.1"
                     /translation="MSVLIIAEHDNKQLNPATLHAVAAAAKLGKVDLLVVGNGASSVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYRYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRVTAFDAVAAQGGN
                     AEVINVKTTPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSVEKFSEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLIELLKN"
     gene            23801..24412
                     /locus_tag="AABD07_000445"
     CDS             23801..24412
                     /locus_tag="AABD07_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HFB2355039.1"
                     /translation="MITTYKTITSPTQAEFKDKGSRFIAFAYPIRTLADVKKYLNLLK
                     EEHYKARHWCYAYRLGVNGMQFRGNDDGEPPGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGALLGVPGLIHAYKEATAQALAIAEVVEKNIEKTVWLKCEYPFLNEAICIAKQYQAD
                     ILEQDLQLDCRLTVSLSLANYEACVAAWKNTRQVEVNTEKPFE"
     gene            complement(24464..24769)
                     /locus_tag="AABD07_000446"
     CDS             complement(24464..24769)
                     /locus_tag="AABD07_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HFB2355040.1"
                     /translation="MDEIQSKYREWCHLLLQLEENIRRWKYAVALIRDMDNFYTHEYQ
                     VRHQTIEDGVELNLQTEGEYSIMSEDALWNAPGEFHQLAWLYLCSSVDTLDRYTQEN"
     gene            24939..26210
                     /gene="purD"
                     /locus_tag="AABD07_000447"
     CDS             24939..26210
                     /gene="purD"
                     /locus_tag="AABD07_000447"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HFB2355041.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIESKLQ
                     NIALTAYQDLIEFCRKENIVFTVVGPEAPLAAGIVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMVKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLVAGKGVIVAMTLD
                     EAHAAIDDMLLGNKMGNAGERVVIEDFLQGEEASFIVMVDGNHVLPMATSRDHKRLLD
                     GDKGPNTGGMGAYSPAPVVTPAVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLADLVEAAIDGRLDSVKAEWNPQTAVGVVL
                     AAQNYPETPKKGDVISGLDDVNRIGKVFHAGTTVNEKGDVLTNGGRILCVVGLGDDVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            26244..26846
                     /locus_tag="AABD07_000448"
     CDS             26244..26846
                     /locus_tag="AABD07_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFB2355042.1"
                     /translation="MTDALQTAFYIMLFSRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQLEQLQPLLQMPSENIQTMLRNEWPA
                     PKTFLLLAKSGVLPALRGKRRSKLAVRVPDHTGARRLCQALGMPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            26861..27376
                     /locus_tag="AABD07_000449"
     CDS             26861..27376
                     /locus_tag="AABD07_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355043.1"
                     /translation="MKTFLYTQRKNFLDGISLHDCYRTAIKVEGRNVCFDFEDGFVVL
                     DNNPNNQAGKHLKTDFSRVVLTHENRNAEDDYLVDIFEDIVFLGKRLFTVRKFLDFSE
                     LLEMINAQGYFLEFLYLYECIGVKTSDYFLEAVLVTGRSRECKKCFIKIMRASSFVYQ
                     WNNLRLNSEIV"
     gene            complement(27528..27950)
                     /locus_tag="AABD07_000450"
     CDS             complement(27528..27950)
                     /locus_tag="AABD07_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355044.1"
                     /translation="MRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNIHTYINK
                     DSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSSLQLFDT
                     KNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         6695 a         6421 c         7882 g         6956 t
ORIGIN      
        1 gtatggcgga aaacccgcct ttttaaagtt ttattcatat tttattcctt aagtttgcct
       61 tcgcgggacg gcgcgccgcg aacgccgggg ttcggtaaac cgcccgattc cgcgcccgcc
      121 ggattgctga ttgaaaagct tacctcccca ttttaacttt gcgcacttat cacggtaaag
      181 cgttttttag caaaccgccg cagatgcccg accggtccgg attcccgcct gcgcgggaat
      241 gacgaatcca tccatacaga aacctgcacc gcgtcattcc cgcgaaccta catcccgtca
      301 ttcccacgaa agtgggaatc cagaatctct aaagcttcag ctaacctttg aatattgctg
      361 ttgttccacg ttctagattc ccgcctgcgc gggaatgacg gcatcggttt gacggtattt
      421 aattgaattg tggaaattga cggattcagt gagattggcg ggatgaagcc taccctatag
      481 cccgcctttt atagcggatt aacaaaaacc ggtacgggtt gccccgcccc ggctcaaagg
      541 gaacggttcc ctaaggcgcc caagcaccgg gcggatcggt tccgtaccat ttgtactgcc
      601 tgcggcccgc cgccttgtcc tgattttcgt taatccgcta tgcttataca caaccagcca
      661 aaagccatct tattgaaata tcataagatt tactcaaaaa tcttattttc tccaccactt
      721 atgcacaaac tcggatacac actctgccaa tatgcagaaa aaaagacatt cgcgccgaca
      781 ccttttcatc cccacaagtt ccaaacacat ttccggctta aatatccaca gcattcccgt
      841 tcttaaaggc accggcagcc attcggtaaa gaaaagcggg atgtcgtccg cacaacaagc
      901 aaactatcca caaaacctat tccccacgaa aaacaatcca caggtatgca caaaagggaa
      961 tcctccttac cgacaccctt ttaaaacggc aattcagatg attttaaaaa taaaaaaaag
     1021 ttacccacag aaaattcccc atatcaatat aatcatcgtt ttattattta aaccttatat
     1081 tttatttata acccttcagg gaaacggcac ggcaaagcgt aaaggcatct tttcaaaaaa
     1141 ttaaaaagtt aaggattgtt aaacaagtgt aaatcaggta gagttgcagc cgataaatta
     1201 aatctataac ggagcttcct gcaatgaaag gcgatattgg cgtaatcggt ttggcggtta
     1261 tgggtcaaaa cctgattttg aatatgaacg attgcggatt taaggttgtc gcctacaacc
     1321 ggacaatcgg taaagtggac gaatttttaa acggtgcggc aaaagagacg ggcattatcg
     1381 gcgcgtattc cctgcaagac ttggtcgata agctggcaaa accgagaaaa atcatgatga
     1441 tggttcgcgc aggttcggtg gttgacgact ttgtcgaaca actgcttccg ctgttggaag
     1501 aaggcgacat cattatcgac ggcggcaatg ccaattaccc cgacacgaca cggcggacac
     1561 attaccttgc cggaaaaggg attttgtttg tcggcgcggg ggtatccggc ggcgaagaag
     1621 gcgcgcggcg cgggccgtcc atcatgccgg gcggggataa gcgcgcttgg gaagcggtca
     1681 agccgatttt ccaggcgatt gccgccaaaa cgccgcaggg cgaaccgtgt tgcgactggg
     1741 tcggcaagga tggcgcggga cattttgtca aaatggtgca caacggcatc gaatacggcg
     1801 atatgcagct gatttgcgaa gcgtaccagt ttatgaaaga cggtttgggg ctgtcctacg
     1861 acgaaatgca ccgcgtgttt gccgagtgga acaaaaccga gctggattct tatctgattg
     1921 aaatcacagc ggcaattttg ggctataagg acgaaggcgg cgaaccgctg gccgagaaaa
     1981 tcctcgatac ggcagggcaa aaaggcacgg gcaaatggac gggcatcaat gccttggatt
     2041 tgggcattcc gctgacgctg atttccgaag ccgtattcgc ccgctgtgtt tcgtcgttca
     2101 aagaacagcg cgtgcagacc ggcaagctgt tcgcccgaac cgccacgccc gtcgaaggcg
     2161 gcaaacaaga atgggtcgag gcgttgagac aggctttgct tgcctccaaa atcatttcct
     2221 acgcacaagg ctttatgttg atccgcgaag cgggcgaaag ttacggctgg gatttggact
     2281 acggcaacac tgcgctgctg tggcgcgaag gctgcatcat ccgcagcgcg tttttgggca
     2341 atatccgcga cgcgtatgag gccaatcccg atttggtgtt cttgggtgcg gatccgtatt
     2401 tcaaaaatat tttggaaaac tgcctgccgg catggcgcaa ggtggttgcc aaggcggtcg
     2461 aatgcggcat ccctatgccc tgcatggctt cggcgattac gttcttggac ggctatacga
     2521 ccgaacgcct gcctgccaac ctcttgcagg cacagcgcga ctacttcggc gcgcacactt
     2581 acgagcgcac cgacaaaccg cgcggcgaat ttttccatac caactggacg ggcaagggcg
     2641 gagataccgc ttcgacaacc tacgatattt gattccgttg ccgaaatgcc gtccgaaccg
     2701 ttcggacggc atttgttttg caggaaatag aaagatgttc caatggcttt atgatgtatt
     2761 gtggctgctt gcgccgatat ggatacggcg ttatttggac aaacgctccg gaagtgcccc
     2821 ggcataccgg gcgcataggg acgagcgttt cggcaagccg catccgaatc ccgttaccgg
     2881 cgcggtttgg atacacgccg tttcggtcgg agaaacgcgt gccgcccagc ccttgatacg
     2941 cgagttgcgg cggcgttttc ccgatgcgcc gctgctgatg acgcagatga ccccgacggg
     3001 acgggaaacc gcgcaagttc tgtttcccga tgcgcaatgc cgctatcttc cgtatgacaa
     3061 aaaaacgtgg gtacggcagt ttttgcgcga acaccgcccg atgttcggca ttttgatgga
     3121 aaccgaaatc tggcccaatc tgatgaagga atgccggcga gcgggtgtgc cgctgttttt
     3181 ggcgaatgcg cggctgtcgg aaaaatcgct gaacggttat ctgaaagtcc gccgcctgat
     3241 ccgtcccgca gccgcttcgc tgacgggctg tctggcgcag acggaggcgg atgctgcgcg
     3301 gttggcgaaa ttgggcgcgg catccgtgca ggtgtgcggc aataccaaat acgacctgat
     3361 gccgtctgaa gacatgaaaa cgctggcggg gcagtttgaa aaacgcatcg gaggccggcc
     3421 ggttgccgtg tgcggcagca cgcgcgttta tcggggcgaa gacgaggcgg aaaaactgct
     3481 ggcggcgtgg caacaatatc gcggcgatgc cctgctggcc gtcgtgccgc gccatcccga
     3541 gcattttcag acgacatttg aaacggcgaa acgcttcggg tttaaggttc agcggcgcag
     3601 cgacggtttg ccggtcgaac ccgatacgca ggtgtggata ggcgacagta tgggcgagct
     3661 gtatgcgtat tacctgtgcg ccgatgtcgc ttttgtcggc ggcagtctgg tcggttcggg
     3721 ctgtcagaac atcatcgaac cgctttcctg cggcgttacg acgatattcg gcttttcgac
     3781 ctacaatttt tccgaagcct gccggcacgc cttggcatcg ggtgcggcgg ttcaagtcga
     3841 atcggcggac gcgtggcgtg aagccgttga aaaaaactta tctggcgagg ggggcggaat
     3901 gcagatgcag gcgcgcgtgg acggctttat cgcacaacat cgcggagcgg gcgcgagaat
     3961 cgccgaggcg gtgcgggaag cggtatgcgg acatcggggg cgatagtgat acaatccgta
     4021 tccgagtttt ccggttggag catcgtatga gtatttatgc cgtcgcgcac atcatccacc
     4081 tgtattgcgc caccgccttt gtcggcggcg tgttttttga agtgctggtt ttgtccgtcc
     4141 tgcatacggg acgggtgtcg cgcgaggcgc ggcgcgaagt ggaaaaggca atgtcttacc
     4201 gcgccgtcag ggtgatgccg tttgcggtcg gactgctgtt cgccagcggc atcgtgatgg
     4261 cggcaaaccg ctaccttcct atatcgggcg aaccgtttgc cacttccttc ggtacgatgc
     4321 tgacgctgaa aatcctgttg gcgttcagcg tgttggcgca cttcgccatc gccgtcgtca
     4381 aaatggcgcg ttccacgctg acggtcggct ggtcgaaata catacacgcc gtcgtcttta
     4441 cccatatgct gctgattgtc tttttggcaa aagcgatgtt ttatatcagc tggtaacaca
     4501 actacatttc aaatcaggag attgaaccat gacagaatat cccggcatcg ggtcgccgtt
     4561 gttttacggc gttttttttg cggcagtgct ggtcatgatt gccttggata tgttttcgct
     4621 gaagaaaaac ggcagccata aagtcggcat caaagaaacc ttggcatgga gcggcttgtg
     4681 ggttgccgta tcctgcctgt tcgcaggctg gctgtatttc gaactcgccg gcaatcccgg
     4741 ctacggcgcg gcagccgcaa aagaaaaagt attggaattc tttaccggct acattttgga
     4801 aaaatcgttg gcagtcgaca atattttcgt gttcctgatg atattcggct acttcaaagt
     4861 cgcaccgcag tttcaacacc gcgtgctgct gtacggcgta ttgggcgcat tggtattgcg
     4921 caccgtcatg attttcgtcg gcgcggcact ggttcggcag ttcgagtgga ttctgtatct
     4981 gttcggcgcg ttcctgctct ataccggcat acacatgatg aagcccgaag gagatgagga
     5041 agaggatttg gcaaacagca ggctgctgaa tgccgtcaag aaagtcgttc cggtcggcac
     5101 ggcgtttcac ggcgagaaat tttttaccgt cgagaatggc aaaaaaatcg ccacgccgct
     5161 gtttttggtg ctgattatga ttgaattgag cgatgtcgtt tttgccgtgg acagtatccc
     5221 cgccgtcttt gccgttacca ccgatccgtt tatcgtgctg acttccaata ttttcgctat
     5281 tttgggtttg cgggcgatgt atttcctgct ggcggatgtg gcggaacgct ttatcttcct
     5341 gaaatacggc ttggcattcg tgttgggttt tatcggtgtg aaaatgctgg tgatgcattg
     5401 ggtacacatc ccgatttccg tttcgctgtc ggtcgtgttc ggcgcgttgg gtgcatcgat
     5461 actgacctcg ttaatttata cgaaaaaaca gcctgataaa taaaacgccg tctgaacgcc
     5521 gacaaaatgg ttgacagcat caggcttgat gtataaactt tcaaattttt cgggtcgtta
     5581 gctcagtcgg tagagcagcg gacttttaat ccgttggtcg agcgttcgaa tcgctcacga
     5641 cccaccaggt aaagcaaaaa agctgagttt tcaaaactcg gctttttttt gttttccgac
     5701 aatccttgtt cggaaagcgc ggcatttcgt caaattcttt ggtgcggctt ccgtattttt
     5761 cccgaaaatc ccttataatt ccgcctctgc aaccttcatc gggtgatgct ttatgcattg
     5821 tcccgagtat tgaaatatta gcaagtaccc accaggaggg aacaaacgtg gacaaactga
     5881 aaatctccgc aaacggcccg ctcaacgggg aaataacggt ctcgggcgcg aaaaacgcgg
     5941 cattgccgct gatgtgcgcg ggtttgctga cgtcgggtac gttgcgcctg aaaaacgtcc
     6001 ctatgctggc agatgtcgca accacgcaaa agctgcttca gggcatgggc gcgcgcgttc
     6061 tgaccgacaa tatcagcgaa tttgaaatca acggcggtac ggtcaacaat acctgcgccc
     6121 cttacgaatt ggttcggacg atgcgcgctt cgattttggt gcttggcccg acgctggcgc
     6181 gtttcggcga ggcgcaagtc agcctgccgg gcggctgcgc catcggttcg cgccccgtca
     6241 atcagcattt gaaaggcttg gaagcgatgg gggcggaaat cgccatcgaa cacggttacg
     6301 tcaaagccaa aggcaaactc aaaggtgcgc gcgtggcgat ggatgtcgtt accgtcggcg
     6361 gtacggaaaa cctgctgatg gcggcgacgc tggcggaagg tacgacggtt ttggaaaact
     6421 gcgccatcga gcctgaagtg gtcgatttgg cggaatgcct ggtcaaaatg ggcgcgaaaa
     6481 tcagcggcat cggaacatcg accatgattg tggaaggtgc gggcgagctg tacggctgcg
     6541 aacacagcgt cgtccccgac cggattgaag cggggacgtt cctgtgtgcg gtggcgataa
     6601 ccggcggcag ggtggttttg cggaatgccg ccccgaaaac gatggaagtg gtgttggaca
     6661 aactggtcga ggcaggtgcg gtgattgaag cgggcgacga ttggatcgcc atcgatatgc
     6721 ggcagcgtcc gaaggcggtg gacatccgca cggtcgtcca tcccggcttc cccacggata
     6781 tgcaggcgca gtttatggca ttgaatgctg tggcggaagg aagctgccgc gtggtggaaa
     6841 cgatttttga aaaccgcttt atgcacgttc cggagttgaa ccggatgggg gcgaacatta
     6901 caaccgaggg caatacggca tttgtgcagg gtgtggaacg gctttccggc gcggtcgtca
     6961 aggcgacgga tttgcgcgcg tccgccagcc tcgttatcgc cggtttggcg gcgcgcggcg
     7021 aaaccgtggt cgaacggatt taccacttgg atcgcggtta tgaaaatatt gaaaaaaaac
     7081 tcggcagcgt cggtgcgaac atcgagcgcg tatccggctg atcgggttgc gatgccgtct
     7141 gaaggcttca ggcggcatca attgtttctg tatcgcaaac actgattgaa aaggactgat
     7201 tatggcattt ttaaaactga ccgaacaaaa cgtgcggggc aaaaccgtcc tcatccgcgc
     7261 cgatatgaac gtgccgttca aaggcggcaa aatcagcgac gacacccgta tccgcgcctc
     7321 gctcgcgtcc gtcaaatact gcttggacaa cggcgcgtcc gttattgtga tgacccactt
     7381 gggccgcccg accgaaggcg agttccaccc cgaagacgac gttgcgcccg ttgccgcgca
     7441 cttgggcggc ctgttgggca aagacgtgaa agtattgaac gactggcgcg aaaacaaacc
     7501 ggctttgaac gcgggcgatg tcgtgatgtt gcaaaacgtg cgtatcaaca aaggcgagaa
     7561 gaaaaacgat ttagaactgg gcaaagccta cgccgccttg tgcgacgtgt tcgtcaatga
     7621 tgcgttcggc accgcacacc gcgcccaagc ttcgaccgaa gccgttgccc aagccgcgcc
     7681 cgtcgcctgc gccggcgtat tgatggcggg cgaactcgac gctttgggca aagccttgaa
     7741 acagcccgcg cgcccgatgg tggcgattgt tgccggcagc aaagtgtcca ccaagctgac
     7801 catcctcgaa tcgttggcgg acaaagtcga tcagcttatc gtcggcggcg gcatcgccaa
     7861 cacattcctg ttggcggaag gcaaagccat cggtaaatcg ctggcggaac atgatttggt
     7921 ggaagaatcc aaaaaaatta tggcgaaaat ggcggccaaa ggcggttctg tgccgctgcc
     7981 gaccgatgtc gtcgttgcca aagcctttgc cgccgatgcc gaagcggtgg taaaagacat
     8041 cgccgacgtt gccgaagacg agatgatttt ggacatcggc ccgaaatccg ccgccgcgct
     8101 tgccgatttg cttaaagccg ccggtacggt cgtttggaac gggccggtcg gcgtgttcga
     8161 gttcgatcaa ttcgcaggcg gcacaaaagc ccttgccgaa gccatcgccc aaagcaaagc
     8221 gttctcgatt gcgggcggcg gcgacacgct ggcggcgatt gccaaattcg gcgttaccga
     8281 acaaatcggc tacatctcca ccggcggcgg cgcgttcctt gagttcttgg aaggcaaaga
     8341 gctgcctgcc gtagccgctt tggaaaaaac gcggcgagta aacggtttga tataaaaaaa
     8401 tgccgtctga aacgaaatgg tttcagacgg catttttgtg tggcggttat tgtgctttgg
     8461 cagcccattc cgccggagtg gcggcaaccg aaatggaaag tgcgtgcagt tcgttgcttt
     8521 ccagttgggc tttgagtccg tctttaatca ggcggtggcg cgcgaggcgt gccttgcctt
     8581 caaattctga tgaaacgatg acggcgaaaa aatggtgtcc gtcgccttct acttcgatgt
     8641 gttcgcattt tgccacgcct gcaatcaggg ccttgacttg ttcgggtgtc agcatagtgg
     8701 ggagtcctta ttggggaaat gcgccattat actggcaaat cgaaattccg tctgaaaacg
     8761 gcttcagacg gaatttttga cggtgtttta ttttttggct ttgaagcaga gcaggtgttg
     8821 tgtggtggca agccacgcgc cgaatacgcc caacgcgatg acgaagccga acaccagccc
     8881 gagttcgccg acgtagaaga aacgccagcc gatgttcaag ccgtagggtt tgaagatggc
     8941 atcgaccaag gggtgcacgg cagagagcag ccaaccgcaa agccctaagc tgacggcggc
     9001 ggagaagata ctctgccaca tagcctgata aaggaagggg cggcggataa acgacgcggg
     9061 cgcacccagg agtttggtga tttcgatttc ttctttgcgg ctgaggattt gcagtcggat
     9121 ggtgttgtgt gcgacaagga cgaaagccat acccagcgtc agggaaagaa accataagat
     9181 tttgcggatg aactcgttga tttggtacag cgtttgcacc cattcggtat ccatagacgc
     9241 ggattcgacc ataggcagct tggtaatgtc ccggtagatt gcctgcattt gggcgggcgt
     9301 ggttgccggg tcgggggtaa cgataaagac atccggcagg gggttgccgt caagcatgga
     9361 aatcagattt tggtcgaggt tggactgtaa ttccgccaaa ccgtcttcct tgccgatgaa
     9421 gcggatgttg tcgagccgtt tatcgcgcgt cagcaggctg cgtacggtat cgctgtcgct
     9481 ttgtgcggcg gcggtttcca tatagacggt gatttgcggc gactcgttga gtttgcccaa
     9541 cacgctttgc ccgctttgga tgcccagata cataaacagc ggcagggtca tcgcgacggc
     9601 aagcattatg agggtaagca gtgtgccgaa gggttggcgc agaagctgtt tgagtgcgga
     9661 gcgcgcggat tcgacgtgca gcgagaagta gtggatgatg ctcatgcgag tcgtcctttc
     9721 gagaggcgca ggatgcggtg tccgtagtcc gccatcaggg tttcgtcatg tgcggcgacg
     9781 atgacggtgg ttcccgcttc gtggaaggtt ttgaacaatt ccataatatc gagcgcgtag
     9841 gcacggtcga ggttggcgga gggttcgtcg gcaatcagca ggccgggctg gtggacgacg
     9901 gcgcgggcga tgcacaggcg ttgttgttca ccgcccgaga gggttacggg atcgtccaat
     9961 tctcgtcctt tcaagccgac tttttcgatg gcgatgcggg cgcgttcttc ggctttgcgc
    10021 ggcggatagc cgataatccg caggggcagg atgacgtttt gcaggacatt gcggtcgttg
    10081 aggattttgt ggtcttggaa cacgatgccg atgtgttggc gcataaagcc gatttggttg
    10141 tcggacaatg tgccgaggtc ctgcccgtta aacaggactt tgcccatgct cggcttggtg
    10201 atgcccgaaa tcagcttgag gacggtggat ttgcccgaac cggagtgtcc cgcgataaaa
    10261 atcatctcgc ctttgttgat ttggaagctg acgtttttca gggcttcaaa accgccggga
    10321 taggttttgg aaacttgttc gaaacggatc ataggaggtc ctgtaaggaa gggcggcata
    10381 tcgtttcggg cggttgcgtc cgcagggata tgccgtctga acaataggta agacagtacc
    10441 gattataaag attccgcctg tttttagata gtggataagt ttggcggata ccgaaggccg
    10501 ggcgggaaaa tgccgtctga agcggcttca gacggcatcc ggcgtttaac ggcattttga
    10561 atgggcgagt ttgacggctt cggtcaggct tttctcgttc acctctcctg taatggtctg
    10621 cctgtatccg catttcgggg cttcgacgac ggtaaagggc agtacgccga cattgtttcc
    10681 gtaggatttc ataaagtttc ggctgttcgc cccggtgtaa cgccaaatcg ggtagctgac
    10741 cggggtctgc ttgagaaagt tgccgatatt gtcggatgtg tcgagcgcga tgccgaccat
    10801 atcgacgctg ccttttttct gcgctttgta ccatttggac atggcgggca tctcttttcg
    10861 acacggaccg caccaagtcg cccataggtt ggcgatgcgg acgggggctt tgagcgattg
    10921 caggttttgc ggggtattgt ctttccatcc ggccagttcg tctgccgagg cggtatgtgc
    10981 ggcaaatgtg gcggcaaggg cgattgcggc gagattcaag cgtttcatcg ttttgtcctt
    11041 tgtatgtcga ttcgggtatt gtaaaccgtt tggtacggtt ggaggcgggg tattgagtaa
    11101 aaccctgcgt aagccgataa taaggggatt gtcgagaagt agggaaatgt catgtctgaa
    11161 atcaaaattt tccacaatcc gcgttgcagc aaatcgcgtg ccgccgtgtc cctattggaa
    11221 gaacgcggca ttgctgccga agcggtcaaa tatttggata cgccgcccga cttgtccgaa
    11281 ttgaaggata ttttcaacaa attgggcttg gaatcggcgc gcgggatgat gcgcgtgaaa
    11341 gatgatttgt acaaggaatt gggtttggac aaccccgatt tggacaatga cgcgctgctg
    11401 cgtgccatcg ccgatcatcc cgccctgttg gagcgtccga ttgttttggc aaacggtaag
    11461 gcggctgtcg gcagaccgtt ggaaaatatc gaagcggtat tgtgaacaaa cggctgtttt
    11521 gcagccgcaa cggcttgcgc tattacctgt tgggcggttt ctgtttgagt gtttttccgc
    11581 ttttgctggt gtttgcctca tccgtttggg cggtttatcg gacgggcggg caggttttgc
    11641 cgccgtatgt ccgggcggat gccgcgctgg tgttgggcgc agccgcgtgg gacaaacgcc
    11701 cttccccggt ttttcgggaa cgcatcaacc acgccatcgc gctttaccaa agccgcaggg
    11761 taggcaaaat cgtgtttacg ggagggcgaa ccaaaaaagg ctatatgacc gaagccgagg
    11821 tcgggcggcg gtacgcgctc aaacaggggg ttccggcgcg caacatcctg tttgaaaaca
    11881 cttcgcgcaa cacttatgaa aacctgaaca acatccgtcc ggttttgcgt gccaacggta
    11941 ttgccagcgt ggtgattgtc agcgatccct accatttggc gcgggcggcg gaaatggcgg
    12001 aggatttggg tgtccgcgtt tatatgtctg ccacgccgac cacgcggttt gatgcgggaa
    12061 ataagaaaaa aatctttatg ctgcaagagg ggtatgcgtt atccctctac cgtttggaaa
    12121 aatggggcag ccgctttttg ggatggctgt ctgattgaag cggtagaaaa tgccgtctga
    12181 aacttatccg caggcagggt tcggacggca tttttgatgc ctaagcacgg taaaaacagt
    12241 aaaataaacg ctttcaaaga tttcggagcc attatgaccg tcaaaacccg tttcgccccc
    12301 agccccaccg gttacctgca catcggcggc gttcgcaccg ccttgttttc gtgggcgttt
    12361 gcccgccatc ataaaggcga atttttattg cgtatcgaag acaccgactt ggcacgttcc
    12421 accgccgaat ccgtcaacat catccttgac ggcatgaaat gggtcggtct cgattacgac
    12481 aacgccgaca acgtggtgta ccaaacccgc cgtttcgacc gttataaaga agtcattgcc
    12541 gaactcttgg caaaaggcga tgcctactac tgctattgca gcaaagaaga attggaagcg
    12601 atgcgcgaga aagccgaaaa agaaggcacg gcgacttacg accgccgctg gcggccggaa
    12661 gcaggcaaaa ccctgcccga aattcctgca ggcgtgcaac ccgtcgtccg cttcaaaacg
    12721 cctttggacg gcgttaccaa atggacagac ttggtcaaag gcgaaatctc catccccaac
    12781 gaagccctag acgacctgat tattgcccgc gccgacggta cgccgaccta caacttctgc
    12841 gccgtggtag acgactacga catgggcgtt acccacatta tccgcgggga cgaccatgtg
    12901 aacaacaccc cgaaacaaat caacatcttg aaagccatcg gcgcgaacct gcccgaatac
    12961 gggcatctgc cgatgattct caacgaacaa ggcaaaaaaa tctccaaacg cagcggcgat
    13021 accgtcgcca ttaccgattt cggcgcaatg ggcattctgc ccgaagcgat gctcaactat
    13081 ttggcgcgtt tgggctgggc gcacggcgac gatgagtttt tcacgacgga acaattcatc
    13141 gaatggtttg atttgaaaga cgtttccccg tccccaagcc gtatggattt gaaaaagctc
    13201 tattggatca acggcgaaca catcaaaatc acacccgacg gcaaacttac cgaactcgtc
    13261 aaaccgcgcc ttgcgctgcg cgatattcat gaaaccgaaa aacctgcgtt ggaagacgtg
    13321 ttggcactgg tcaaagaccg cgcccaagat ttgaacgcct tggcagacga atgcctgtat
    13381 ttctacaaaa aacaagtccc tgccgaagcc gatgttgcca aacactggga cgacgaagcc
    13441 gccgcccgta tgctgcgctt cgccgaacgc ctcgaagggc tggaagactg gaacgccaaa
    13501 gccattcacg acctcttcaa acctttctgc gacgaagaag gcatcaaaat gggcaaactc
    13561 ggtatgcccc tgcgccttgc tgtctgcggt acggcaaaaa ccccgagcgt cgatgccgtg
    13621 ttggcattaa tcagcaaaga ggaagtgttg aaacgcatcc gtgcttaagt tatccacagg
    13681 tgcgggcaat gccgtctgat gtcggaatgc ggcttcagac ggcattcaga cggaagttga
    13741 acatgaaaaa aatattgtat tttctgatgt ttgttttttc tacaagcgta tgggcagggg
    13801 gtgcggaaga caatttgctc agcatccaat ccggttaccg tgctttactg caaaagcaaa
    13861 acaatctgga cggaaaaatc atcgggatgc agtcggattt ggaagatgcg cgccggcgtt
    13921 tgcaggcggc tcaggcagac atcgcccgtt tggaagcgga aattcctgca gcaatggccc
    13981 aaaaagcccg gcaggctgaa gagatgaggc aaatcggagt gcgtttggac catgcttgga
    14041 atgcggttta cggcgcaggg gaacgaaagc gtcgggggaa ttgaccgatg aattccctct
    14101 ttgtggacaa cactgttttt attacacggc tgaaagccgg gcatatcggc aggttggttc
    14161 aggcgttgtt tgaggagtgg cacggatttg aaccgtggtc ttctgtggat aagattcgtg
    14221 cctattacgg cagatgtttg aaggatgacg aactgccgct ggcttttgcg gctgtggatg
    14281 attccggaac cctgttgggt tcggctgcag tcaagcggca tgatatggaa aattttccac
    14341 agtatgaata ttggttgggc gatgtctttg ttttacctga atatcgcgga aaaggcattg
    14401 gcaggaggct ggtcgcccac tgcataggcg cagcgcgttc gctggggata aagttcttgt
    14461 atctttatac gcctgatgtg caaatatttt atgaatcatt cggctgggcg gttgtcgggc
    14521 gacatttcca taacggggaa tgggttacgg ttatgcgttt ggatgtggat aaggtttaag
    14581 ccgaatgggc agatgccgtc tgagctgttc ggacggcatt ttttatgttt ggaaatttcc
    14641 tgtcagatat agtggattaa caaaaaccgg tacggcgttg ccccgccccg gctcaaaggg
    14701 aacgattccc taaggtgccc aagcaccggg cggatcggtt ccgtaccatt tgtactgcct
    14761 gcggcccgcc gccttgtcct gatttttgtt aatccgccat aaagtttatc cacagatttt
    14821 tccatatggt ttgatgctgc tccgccaacg gaaattaaga tacggatttg cacaaatctt
    14881 tcagacggta cagttctgac aatgcttcgc gcggggtcag gctgtcggga tcgaggtttt
    14941 ccagggctgc tgccaatata ccttcaaaat gtttttcctc tgctttatcc acaaagcagt
    15001 ccacattcgg ttcatctcct ttttcagacg gcatggtact gaaaatatcc agttggggac
    15061 ggtttgcggc ggcttggttt tccagtccgt tcaaatgctt ttgggcggct ttcaatgcgc
    15121 gcacaggcag gccggcgagt ttggcgacgg cgatgccgta gctttttccg gcgggaccgg
    15181 gttggatttg gtgcaggaac acgatgtccc gtccctgttc gagcgcggaa aggtgcatat
    15241 tgacggcggc ggcgtgggct tcgggcaggt aggtcagctc gaaatagtgg gtggcaaaca
    15301 ggctgaagga tttgtttttt tgcagcaggt gttcggcgat tgcgtgcgcg agggcgaggc
    15361 cgtcgaaagt ggaagtacca cgtccgactt cgtccattaa aacaatgctt tgttcggtgg
    15421 cgtgatgcag gatgtaggcg gtttcgctca tttcgaccat gaaggtggag cggttggagg
    15481 cgaggtcgtc cgatgcgccg atgcgggtga agatttgatc gacaggcccg attgtggcgg
    15541 catcggcagg cacgaaacag ccggtgtgtg ccaataaaac aatcagcgcg acttggcgca
    15601 tataggtgga tttgccgccc atattggggc cggtgagcag catgaggcgg tgtttgtggt
    15661 cgaggtcggt gtggttggct gtgaagtggc gtacctgctg ttcgacaacg ggatggcggc
    15721 cgttttcgat gtggacaacc ggatagtcgg caaactcggg acggacaaag ttccgctctt
    15781 ttgccaaggc tgaaaatgtg gacaacacgt ccagcgcggc ggcggctttg gcggcttttt
    15841 gaagctgcgg caatgccgtc cgaaggtttt tcaatacgcc gtcaaagagt tgtttttcta
    15901 aggcgagggc ttggtcttga gcagtcagca ctttgtcttc aaaggctttc agttccggcg
    15961 tgatgaagcg ttcggcgttt ttgagggttt gccggcgttg gtagtcggca ggtgcttgtt
    16021 cggcttgggt tttggacaat tcaatgtaaa agccgtgaac gcggttgaac tcgactttga
    16081 gtgtggacaa accggtacgt tcgcgttcct tggcttccaa atccagcaaa aattcgtcgc
    16141 catggttttg aatgcggcgc aattcgtcca gttcgggatg aaaaccgtgg ttgatgacat
    16201 tgccgtcttt cagccagacg gaaggttcgg gcatcacggc ggctttgagg gtttcggcaa
    16261 ctggcagggt ttcggggaaa acggctttaa gggtttccaa caggctgctg ccggttgcgg
    16321 acaagtcgat ttgtgccaac tcgaacagac tgtcgcgtaa agatgccaaa tcgcgcgggc
    16381 gggcattgcc gacggcgatg cgggcggcga tacgttcgat gtcggcaatg ctcttcagat
    16441 ggcattggag gggttcgtat tggctttcca gcgcggttac ggcttcttgg cgcgctcgga
    16501 tgtgggcgcg gttgcgtaaa gggtggtgaa gccacaatgc caacaggcgg ctgcccatgt
    16561 gggtggcgca gccgtcgagt atggaaaaca gggtcggcgt ttttttaccg gagagggttt
    16621 gcgtgatttc gagattgcgg cgcgtggcgg catccatgcc gatatattgg ctgtcggttt
    16681 cgagcgacag gccgtccaaa tgttgcggca tcaggttttg cgtcaggcgg atatagttca
    16741 acagcgcacc tgccgcgcca atcgaaacgg cgtgttcttt gctgtccaaa ccgaagccgc
    16801 gcaaatcttg gcagccgaaa tattccgtca gcagtttttc ccccgcgtcg gcggcaaact
    16861 gccacgcgtt caggcgtgta acacccgatg ccgtctgaag ttgcggtgcg tttttactgt
    16921 ccggcagcaa aatttccgcc gcctgcaggc gcgccagttc gtcgttcaat ttatccgcag
    16981 ttgtcagctt ggttttgaat tcgccgcttt gcagcgatgc ccacgccaaa ccgatgtatt
    17041 ttttgtcggg agacacggca acgatgcggt tggtttcctt gtcttccagt aatgcggaat
    17101 cggttagcgt gccgggcgtt acgatgcgca cgactttgcg ctccaccggc cctttgcccg
    17161 cgccgacttc gccgacctgt tcgcaaatcg ccacgctttt gcccaacttg accaggcgcg
    17221 ccagatactg ttccgccgcg tgaaacggaa cgcctgccat tttaatcggc acgccgtcca
    17281 tctgcccgcg tgtggtcagg gtgatgtcca acaatttcgc cgcttccacc gcgtcatcca
    17341 aaaacagctc gtaaaaatca cccatacggt aaaacactag tttgtcggta tgttgcgctt
    17401 ttatgccgag gtattgctgc atcattgggg aaacggcgga tttggacatg gggctgcctt
    17461 attattagga aaacggtatt gtagcaaaag gttttgtctt cgacggaatg agactgaccg
    17521 taagcctgtc aataaagttg tggagacaaa taggaaaacg gcaaagttat ccataagaat
    17581 attattaagt caaaaaacat ccacgcttat ctgtcttata cggcaagcct taaactcaaa
    17641 tttatttaac aaaaaggtaa tgaaaatatt ggatatttgc tacttataca caagcaggtc
    17701 ggcaatcatc aaaatcatca ttaaaatttt aaaatcaaat attgaatgcg cgtttttgaa
    17761 atagcgaaat tcacctgcgt caaacaaaac gcaagtaatt ttatgtaata gtggaatgta
    17821 gttttatttc agaatacaat acaggcatcg gactttattt cacaaccggg agacaaaata
    17881 tgagcatcaa agtagcgatt aacggtttcg gccgcatcgg ccgcctcgca ttgcgtcaaa
    17941 ttgaaaaagc ccacggcatc gaagtcgccg ccgtcaacga cctgacccct gccgaaatgc
    18001 tgctgcacct tttcaaatac gacagcacac aaggccgttt ccaaggtact gccgaattaa
    18061 aagacgatgc catcgtggta aacggcagag aaatcaaagt tttcgccaat ccgaatcccg
    18121 aagaattgcc ttggggcgag ttgggtgtgg atgtcgtcct cgaatgtacc ggtttcttta
    18181 ccaacaaaac caaagccgaa gcacatatcc gtgccggcgc gcgcaaagtc gtgatttccg
    18241 cacccggcgg caatgatgtg aaaaccgtcg tatatggcgt aaaccaagac atcttggacg
    18301 gtagcgaaac tgtcatttcc gccgcttcct gtaccaccaa ctgccttgcc ccgatggcgg
    18361 cagtcctgca aaaagagttc ggcgtagtcg aaggcctgat gaccaccatc cacgcctaca
    18421 ccggcgacca aaacaccctt gacgcgccgc accgcaaagg cgatttgcgc cgcgcccgcg
    18481 ccgccgcgct caacatcgtg cccaacagca ccggcgccgc caaagccatc ggtctggtta
    18541 tccccgaatt gaacggcaaa ctcgacggct ccgcccaacg cgtccctgtt gccaccggct
    18601 cgctgaccga attggtttcc gtcctcgaac gccctgcaac caaagaagaa atcaacgccg
    18661 cgatgaaagc cgcctccagc gaatcttacg gctacaacga agatcaaatc gtttcttccg
    18721 acgttgtcgg catcgaatac ggctcgctct ttgacgcaac ccaaacccgc gtgatgaccg
    18781 tgggcggcaa acaactggtg aaaaccgttg cctggtacga caacgaaatg tcctacacct
    18841 gccaactcgt ccgtactttg gaatacttcg caggcaaaat ctaaggcttg aacaaacctg
    18901 tggataagta aatgccgtct gaacacattg cgttcagacg gcattgttta tctgtaactt
    18961 gatattgcgg cttatggcga acaaacaaca gccgtttgtt caactgctat gcggcaaaac
    19021 cggattttgc ccgatttaaa gcggggttgg ggaaagatta ataaccgtcg cgcggttttc
    19081 ctcgatttga aacctgactt cgtaatccgc aatattcatc acataaatcc gttcgggaat
    19141 attctgatag gcggggcgcg gatcttgggc aatgctttgg ctgatgaggt ttttggtgtt
    19201 tgcagataaa ttttccgcgc cgatgttttc ctgccaaacg acttccaact ctacgggttt
    19261 gccgctgacg aaaccggatg ctgcatcggg tttggattcg ataaagggga tataaggctt
    19321 gatgtccaca atcggcgtgc cgtccagcag gtctgagccg ctgcaataga ggcggacggg
    19381 tttgccggtt tcgatgcgtt cgagtttaag gagagagagt ccgagatggt tggggcggtg
    19441 ggggctgcgc gtggcgaaca cgcccatttt ttgtttgccg ccgagccgtg gcgggcgcac
    19501 catttgcgcc caaccttcat ccaatacgcc gtggaagata aaacttatcc acacataatc
    19561 gaaatcttcc aacccgcgca cgctgtctgc ggtaaattcg ggattcagct cgatgcaggc
    19621 ttctgcggcg gagaccaaac cgggctggcg ggcgatgccg aatttctgtt tgtagggcga
    19681 gcgggcggtg ccgatggggg taatggtata agtcataaga ttgtggataa gttttttgga
    19741 aaaaccttat cttatcacag ccggttttac cgctttcggg tagtaatttg ttataataca
    19801 gggcatttaa atcgcgttga aataaagtag cacagaatcc ttgtgtccaa gacgctctta
    19861 aaaaggcatt ggagtattga taaaaaagaa gcataacggt tcgttataac gaagagggaa
    19921 tcccgtatat tacacccaag tcaggttgtt atctttcctt tcagatctca cctacaggag
    19981 gtgagatctg aaattttggg taataaaatc ggattacagc ttttagcaag gagcacctta
    20041 ggtatagcta aaatggagga ggtggatatg acatatcata tccacctaga tggattgtgc
    20101 tccttaaata aagaaggtaa gagttttgtt attcgtaaaa tagagaatga cgatcttaaa
    20161 tgaagaagta atgagatgat tgtttccatt gatgttgatg cacaaaaaac ttttacgcct
    20221 ttgtgtcctg acgaactgcc cgtgaacgag gggcatttga ttgtcgagga gttaaatgcc
    20281 caagccgctt tggcggattt gcgtgtgatg acgaaagatg cgcatcatat ggcggcgaaa
    20341 tggcttgtgg gtaaccctgt tgatatgttg aagccgacag gtttgtccga tgcggatttg
    20401 acttgggtgg ctcatgcgat ggtcggtacg cgcggctatg aattgttgga cggtctgcct
    20461 tccgtcaagg aatacgatta ttgcgtttgg aaaggtgtcg atcccgaatt gcatccttac
    20521 ggcgcgtgtt ttcacgatat tgaggaaaaa ctgagcactg gattgattga gtggctgcgt
    20581 tgtcaaaata cgaatatggt cattgtcggc ggcttggcta cggattattg tgttaaaaca
    20641 acggttttgc agttacttaa aggcggtcgt tggcaggtta tcgtgaatga agcggcttgt
    20701 cggggtattg cgcccgatac cattgaagca gcgtggcagg aaatgcgttc ttcgggtgcg
    20761 ataattttga aaaacgccga aaaaattaaa aaaatatatt aataatcaat aacttataat
    20821 tgtttcacgt gaaacaccct gtctacatat gaaaattttg cttgtccgtt tgtccagtat
    20881 gggtgattta attcacactt tgcccgcaat cgaagatttg gcgcgacaat gctctgatgt
    20941 agaactgcat tggctatgtg aagccgggtt tgcgggtatt gcacggttgc atccgtttgt
    21001 aaaaaaggtc catgtaatga agtggcggca atggcgcaaa catctctttc aggctgaaac
    21061 ttggcgggag atgggtcgtc tgaaacaggc tttgctgcag gaagcatttg attttgtatt
    21121 ggacagtcag ggtctgatta aaagcgcgtg tttcgccaaa atggcaaaat cccctattta
    21181 tggtttggat aaacacagtg cgcgtgaggg ggtggctgct ttggcgtatg ataaaaagta
    21241 tgtcgtaccg aaaggtagaa atgccgtttg gcgcaaccgt gatctgtttg cccaggtgtt
    21301 tgggtatgca atgcctgaga cgcaggtatt tggtttgtcc gttcctgaag caagccgtct
    21361 gaaaaattta gcgcagccgt attatgcggc tttgcacgcg accagtcggg acagtaagtt
    21421 atggcctatg gaaaattggc gggagttgct gcagaaactg aatcaaaaac aacaatgcaa
    21481 tgtttatctg ccttggggaa acgaggctga aaaagtgcgt gcggaacaga ttgcagacgg
    21541 gctgccgttt accatagtgt gcgctaaaat gaatttatta caggcggcgt atctgttgaa
    21601 acacgcggtt ggaatagttg gtgtagatac cggtttgctg catttggcaa atgccttgga
    21661 aaaacctgtg gtcggcattt ataccgatac cgatccgatt aaaacaggcg ttcaagtttc
    21721 ggctattgca aaaaatgtgg gcaatatcgg gcagattccg accgcagatt tggtttatca
    21781 aacgctgatg gattgtgttt cagcagataa aggctaaagg gtcgtctaaa actgatatgg
    21841 cggcatgata ttttccaatt tattagatac aggaatgtat atccgccagc ctgagtaaat
    21901 actttaaaaa tggtatgatc ggtaaaatta tccgaaagat tgctaaataa attcgttttt
    21961 aaggaaaacg gatttgattt tataaagaag aaggtttggt ttcgctggat ggtgaaagca
    22021 gcgttctttt taggagaatt caatgaaagc actggtcgca gtaaagcgcg tagtggacta
    22081 caacgtcaaa gtccgtgtga aagccgatgg ttcggatgtg gacatcggca atgtcaaaat
    22141 gtcgatgaac ccgtttgatg aaatcgctgt ggaagaagcc gtccgtttga aagaagccgg
    22201 gaaagtaagc gaaattgtag cggtttcttt gggtgaaaag aaatgcgaag aaaccttgcg
    22261 taccgctttg gcaatgggtg ccgaccgtgc cattcatatt gaaaccgatg tgaaattaga
    22321 gccgctggca gttgccaaac tgctgaaagc tgttgcggac aaagaaaatc cgcaaatttt
    22381 ctttttgggc aaacaagcga ttgatgacga tgccaatcaa gtggcgcaaa tgctggcagc
    22441 tttgttgaat gcggcgcaag gtacatttgt ttcaaaagta caaattgaag gtgatgaagt
    22501 acagattgtg cgcgaaattg atggcggcga agaaacgatt gcgttgaaac tgcctgcagt
    22561 catcagcgca gatttgcgtt tgaacgagcc gcgctttgtc aaactcccca atattatggc
    22621 ggcaaagaaa aaacctctgg aaaaactgga ttctgccgat ttggctaccg atatttcgcc
    22681 tcgtctgaaa acggtgaaat ttgccgaacc taaggcgcgt caggcaggcg taaaagtagc
    22741 aagcgttgcc gaattggttg aaaaattgaa aaacgaagcc aaagtgattt gaggaggctg
    22801 aaatgagcgt attgattatt gccgaacacg acaacaaaca gttgaatcct gccactttgc
    22861 atgctgttgc cgctgccgcc aaactgggca aggtcgattt attggttgtc ggaaacggcg
    22921 catcgtccgt cgtggaattc gcgaagcaag tagcgggagt ggaaaaagtt ttggttgcag
    22981 atgctgctca ttatgctgaa ggtttggctg aagagttggc tccgctggtt gtcaaattgg
    23041 cggcggatta ccgctatgtt gcagcaacgg caaccacatt cggtaaaaac cttttgcccc
    23101 gcgtagccgc cttattagac gtaccgcaaa tttctgattt gaccgagatt gtagataaca
    23161 cgacttttgt acgtccgatt tatgcaggta atgcatttga aaccgtgcaa gccgattcag
    23221 aaaaattggt gctgaccttc cgtgtgacgg cttttgacgc agtggcggcg caaggtggta
    23281 atgctgaggt aattaatgtt aaaacaaccc ctgcccaaaa cctgagtcgt tttgttaacc
    23341 gtcaactttc ccattccgat cgtcccgaac tgactcaggc aaaagtgatt gtttccggtg
    23401 gtcgtgcgtt gggtagtgtg gaaaaattca gtgaagtgct gacaccgttg gcggatgttt
    23461 taggtgcggc aatcggtgca tcccgtgcgg cggttgatgc cgagtatgca ccaaacgatg
    23521 ctcaagtcgg acaaaccggt aaggtggttg cgccgcagct ctattttgca atcggtattt
    23581 caggtgcgat tcaacacgtt gccggtatgc aggacagtaa ggtgattgtt gcaatcaaca
    23641 aagatgccga tgcgccgatt ttcaatgtag ccgattacgg attggttggc gatttatttg
    23701 aaattgttcc acaattaata gaattattga aaaattgatg tttcacgtga aactttcagg
    23761 cgactttgtt attaatgagg tcgtctgaaa acatttcagc atgattacga cttataaaac
    23821 cattacttcc ccgacgcagg ctgagtttaa agataaaggc agccgtttta ttgcatttgc
    23881 ctatccgatt cggacattgg ctgatgtgaa aaaatacctc aatctgttaa aggaagagca
    23941 ttataaagcg cggcattggt gctatgccta tcgtttaggt gtgaacggga tgcagtttcg
    24001 cggcaacgat gatggagagc caccaggaag tgctgggcgg ccaattttgg gacagattga
    24061 ttcggtgggt atcactgatg ttttggtcgt ggtcgtccgc tatttcggtg gtgctttatt
    24121 gggcgttccc ggcttgattc acgcatacaa agaggcaacg gctcaggcgt tggcgatcgc
    24181 ggaagtggtt gaaaagaata ttgaaaaaac cgtttggttg aaatgtgagt atccgttttt
    24241 gaatgaagca atatgcattg ccaaacaata tcaggcggat atattggagc aggatttgca
    24301 gttggattgc cgattgacgg taagtttgtc gttggcaaat tatgaggcct gtgttgcggc
    24361 ttggaagaat acacggcagg ttgaagtaaa tacggaaaag ccttttgaat gaaaggttgt
    24421 atgaaatgct ttgtaatggt atttcaggca acctcttcgc tgattaattt tcttgtgtat
    24481 atctgtctaa ggtatcgacg ctggagcata aatatagcca agccaattga tggaattcgc
    24541 ccggcgcgtt ccataatgca tcttcactca taatgctata ttcgccttct gtttgcaaat
    24601 tcagttctac cccgtcttca atagtctgat ggcgcacctg atactcgtgg gtatagaaat
    24661 tgtccatatc gcgaattaaa gcgacggcat atttccaacg gcggatgttt tcttccagtt
    24721 gcagtagtaa atgacaccat tcgcggtatt tgctttggat ttcatcaata cgtttttgcg
    24781 tgtttgcttg ttatttttta atttgtgaat aagttgaata ggttgcagag tggaatgaag
    24841 tggtcttttg tttgattcta ctaaaatttc ttcagatggg acaaaagttc ctttgtatcg
    24901 agttttcgtt aaaagtacat atttgtcaag gagatggcat gaaactgctg gttatcggta
    24961 atggcggtcg cgaacacgcg ctggcttgga agttggcgca gtcgcccaaa gtggaaacag
    25021 tatttgttgc gcccggtaat gccggtacgg cgattgaatc caagctccaa aacattgcct
    25081 tgaccgcgta tcaggatttg attgaattct gccgtaaaga aaatattgtt tttaccgtcg
    25141 tcggccctga agcgcctttg gcggcaggta ttgtggatga ttttcgtgcc gcagggctga
    25201 aaatatttgg tccgacacaa tatgcggcgc agttggaaag ttctaaagat ttcgccaaag
    25261 catttatggt gaaatacaat attccgaccg cgcaatacca aacctttgaa aatgccgatg
    25321 ccgcacatga ttacgtcaat cagaaaggtg cgcctatcgt tatcaaagcc gatggtttgg
    25381 tggcaggtaa aggcgtgatt gtggcaatga ctttggatga agcgcatgct gcgattgacg
    25441 atatgttgtt gggcaataaa atgggcaatg ccggcgaacg cgttgtgatt gaagattttc
    25501 tgcaaggcga agaagcgagc tttatcgtta tggttgatgg caatcatgta ttacctatgg
    25561 cgaccagtcg agaccacaaa cgtcttttag acggagataa aggcccgaat acgggcggta
    25621 tgggtgcgta cagtcccgcg cctgtggtaa cgcctgctgt gtacgagcgt gcgatgaacg
    25681 agattatttt gccgaccgta gcgggtatga aagcggaggg gcacgagttc accggctttt
    25741 tgtacgcagg tttgatgatc gatcaaagcg gtgcacccta tacgattgag tttaactgcc
    25801 gtttcggcga tcccgaaacc cagccgatta tgagccgtct aaacagcgat ttggcggatt
    25861 tggttgaagc ggcaatagac ggcagactgg acagcgtcaa agcggaatgg aatccgcaaa
    25921 ctgccgtggg tgtggtactg gcggcgcaaa attaccccga aacacccaag aaaggcgatg
    25981 ttatttccgg tttggatgac gtcaaccgaa tcggcaaagt attccatgcc ggcacaacgg
    26041 taaacgagaa aggcgacgtg ttgaccaacg gcgggcgcat attgtgtgtt gtaggattgg
    26101 gcgacgatgt ggcgcaagcg aaagccaagg cgtatggcgc gttggaaaaa atcagcttcg
    26161 acgggatgca ataccgtaaa gacattgccg ataaagcgat taaccgttaa ttagaaagag
    26221 gatgatgccg tctgaagcca agtatgactg atgcgcttca gacggcattt tatattatgt
    26281 tattttcgag aattatcgca gcatcagcgc aacgtaagtt aagcgtttat ttgaaaaaag
    26341 gcggtttggt tgcttatccg accgaatctt gttatggctt ggggtgtctt ccgacattag
    26401 ccaaagcact cggtaagttg gcgcatttga aaaaaaggcc gcaacacaag ggtatgattg
    26461 tcatcgggaa tcaacttgaa caattgcagc ctttacttca aatgccgtct gaaaacattc
    26521 aaaccatgct tagaaacgaa tggcctgctc ctaagacttt cctattgttg gctaaatctg
    26581 gcgtattacc tgcgttgcgc gggaagaggc gcagcaagct tgcggtcaga gtgcccgatc
    26641 atacaggtgc aaggcgtttg tgtcaggcat tgggtatgcc tttggtttcc acttcatgta
    26701 atcgggcggg taaacgcgcg tgtcggacgg agagggaagt cagaaggcag ttcggacgcg
    26761 atgtgtggat tgtcggtggg agaatcggca ggcagaaatc gccgagtcag attatcgatg
    26821 gggaaacagg taaacgtttg cgttagatat ggatgcttga gtgaaaactt ttttgtatac
    26881 acaaagaaaa aattttttgg atggtatttc tctacatgat tgttatcgca cggcgataaa
    26941 ggtagaagga cgcaacgtct gctttgattt tgaggacggt tttgtcgttc tggacaataa
    27001 tccgaacaat caagcgggca agcatctgaa aacagatttt tcccgtgttg ttttaaccca
    27061 tgaaaataga aacgccgaag acgactattt ggtcgatatt tttgaagaca tcgtcttttt
    27121 agggaaacgt ttgtttacag tcagaaaatt tcttgatttt tctgaattgc ttgaaatgat
    27181 caatgcacaa ggctattttc ttgaatttct gtatctgtat gaatgtatcg gtgtcaaaac
    27241 aagcgattat tttttagagg ctgtgttggt tacgggacgg agccgggaat gtaaaaaatg
    27301 ctttatcaaa attatgaggg caagcagttt tgtgtatcaa tggaacaatt tacgtttgaa
    27361 tagtgagatt gtatagcggg tttatatttc ggatggaagc cggtttaaaa aaataatgtg
    27421 gataatttca gggaatggca aaatgtcgtc tgaaatgctg atatttcagt attccagacg
    27481 gcatttttat aataaggctt atggataaat ttgtgtataa gttgaaatca gagttttttc
    27541 ccgcatacgg tttcatattg tttttcagtt aatgtcccgg acaggatgct catcgggcgg
    27601 agggaagagg ctgtgtagtt ttgtgtggaa atttccgtgt tttttgtatc aaataactgt
    27661 agcgaactta agcggtatgt tttgttgttg cagtggattt cccactcggc aatggcagtc
    27721 ttgtatgcgg gggtgttggc aaaacgttct tgtttcagat tggtaacaac ttttttatct
    27781 tggaaaatca tcagatttcc gttttttctc acactgtctt tattaatata tgtatgaata
    27841 ttgccgtttg agattgtgcc gatattttcc catcgggcag acttgtccgg tgtgctgcag
    27901 gcggttatca aaatagggag taaaacgaaa gataggaaga ttgggcgcat tagg
//
LOCUS       DAWXHA010000013        24451 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.013, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000013 DAWXHA010000000
VERSION     DAWXHA010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24451
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.013"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(438..523)
                     /locus_tag="AABD07_000451"
     tRNA            complement(438..523)
                     /locus_tag="AABD07_000451"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(487..489),aa:Leu,seq:gag)
     gene            complement(537..887)
                     /gene="secG"
                     /locus_tag="AABD07_000452"
     CDS             complement(537..887)
                     /gene="secG"
                     /locus_tag="AABD07_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HFB2355045.1"
                     /translation="MEAFKTLIWIINIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNIRQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(894..1667)
                     /locus_tag="AABD07_000453"
     CDS             complement(894..1667)
                     /locus_tag="AABD07_000453"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HFB2355046.1"
                     /translation="MYRQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEERETGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            1826..2353
                     /locus_tag="AABD07_000454"
     CDS             1826..2353
                     /locus_tag="AABD07_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HFB2355047.1"
                     /translation="MYANMGDMMHALHFSASDKAALYREVLPQIESVVADEADWVANL
                     ANTAAVLKEAFGWLWVGFYFVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGET
                     VVVKDVNAHPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDEADALYLGEL
                     AKILERRFEASRQAA"
     gene            2456..3112
                     /locus_tag="AABD07_000455"
     CDS             2456..3112
                     /locus_tag="AABD07_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HFB2355048.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALEEIPRELFADESLQG
                     LAYADMELPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAERQKRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVTLVPEVL
                     KEQLKDGGRMAVIVGRRPVQRALLITRRGDVFEEKVLFDTLVAHLDDKDAHPFDSFNF
                     "
     gene            3193..3516
                     /locus_tag="AABD07_000456"
     CDS             3193..3516
                     /locus_tag="AABD07_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HFB2355049.1"
                     /translation="MDIVQLPSAALKAWMDEGRMFCLLDVRTDEEAAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLAEAGFENLYNLQGGIDAWAVEVDA
                     EMARY"
     gene            complement(3779..5946)
                     /locus_tag="AABD07_000457"
                     /pseudo
     CDS             complement(3779..5946)
                     /locus_tag="AABD07_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768939.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            complement(6209..6532)
                     /locus_tag="AABD07_000458"
     CDS             complement(6209..6532)
                     /locus_tag="AABD07_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFB2355050.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGNMTIREGEMAVVPKSVSHRPRSENGCSVVLIDLPD
                     PSEAA"
     gene            complement(6565..7536)
                     /locus_tag="AABD07_000459"
     CDS             complement(6565..7536)
                     /locus_tag="AABD07_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2355051.1"
                     /translation="MKPRFYWAACAVLPAACSPEPAAEKTVSAASQAASTPVATLTVP
                     TARGDAVVPKNPERVAVYDWAALDTLTEPGVNVGATTAPVRVDYLQPAFDKAATVGTL
                     FEPDCESLHRHNPQFVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLSR
                     IFGKEARVAELNAQIDALFAQKREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHSD
                     IGLPPVDESLRNEGHGQPVSFEYIKEKNPGWIFIIDRTAAIGQEGPAAVEVLDNALVC
                     GTNAWKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFEKAEPVAAQ"
     gene            7772..8728
                     /locus_tag="AABD07_000460"
     CDS             7772..8728
                     /locus_tag="AABD07_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2355052.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLKM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDSGGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAGTLTAAACPLLQRPFESDGFGLLADEADALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILNSEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGRLRRLRLEHAL
                     ALIKSGSTIQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            complement(8841..10856)
                     /locus_tag="AABD07_000461"
     CDS             complement(8841..10856)
                     /locus_tag="AABD07_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HFB2355053.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARALS
                     DGILNQMQDTRQIPFCQEHRARMYHFHQNAEYPKGVYRMCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLNKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPAYQIDKGAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSSEGGAKPLNLPNDCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADSKWQEAELPHLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRLQPQQFVSDGIEVRQFWAVSSDGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGIPELPHYLGSVGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGMSSPKHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEACKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQRESADKLACVLLFLKEFLG"
     gene            complement(10952..12262)
                     /gene="argA"
                     /locus_tag="AABD07_000462"
     CDS             complement(10952..12262)
                     /gene="argA"
                     /locus_tag="AABD07_000462"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HFB2355054.1"
                     /translation="MNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLA
                     ADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNPHILVRRLHR"
     gene            complement(12259..12687)
                     /locus_tag="AABD07_000463"
     CDS             complement(12259..12687)
                     /locus_tag="AABD07_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355055.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTHAISKKQISRDEIADILNGGTTLHDTPPATAAAA
                     PAAAPQVSVPPARQEGLNWTIATLFALIVLIMQLSYLFIL"
     gene            complement(12755..13396)
                     /gene="pyrE"
                     /locus_tag="AABD07_000464"
     CDS             complement(12755..13396)
                     /gene="pyrE"
                     /locus_tag="AABD07_000464"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HFB2355056.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGA
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DRGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GKLSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRTYRRQYGVE"
     gene            complement(13458..14195)
                     /locus_tag="AABD07_000465"
     CDS             complement(13458..14195)
                     /locus_tag="AABD07_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFB2355057.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAATIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMP
                     SEQAVADALGQIAGELDGCRAPAVLFLGQAFVNLERQAMIETLCGSRPFFIIDHPARL
                     LRQPELKARNWQVLKQLKRALRQGGGS"
     gene            complement(14189..14629)
                     /gene="rimI"
                     /locus_tag="AABD07_000466"
     CDS             complement(14189..14629)
                     /gene="rimI"
                     /locus_tag="AABD07_000466"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HFB2355058.1"
                     /translation="MNIRPALPSDCAALAALDTVCNPSAWTQRQFESALVSPSEQVFL
                     TEKDGRIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWYAHLPEGTQRLLLE
                     VRAGNAAAQALYTKHGFSIAGRRKNYYCAADGQTEDAVLMEKIC"
     gene            complement(14626..15303)
                     /gene="tsaB"
                     /locus_tag="AABD07_000467"
     CDS             complement(14626..15303)
                     /gene="tsaB"
                     /locus_tag="AABD07_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HFB2355059.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGEIRLFHQEVGIRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIALPEGYVFSDG
                     IGSAFALENRPPFSGKPDMPTAADFLALALGGGYPATGAAHAELLYVRNKIALTAKEQ
                     AERKART"
     gene            complement(15442..16299)
                     /locus_tag="AABD07_000468"
     CDS             complement(15442..16299)
                     /locus_tag="AABD07_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355060.1"
                     /translation="MTRSKPVNRTTFCCLSLTAGPDSDRLQQRRGGGGGVAADIGTGL
                     ADALTAPLDHKDKGLKSLTLEASIPQNGTLTLSAQGAEKTFKAGGKDNSLNTGKLKND
                     KISRFDFVQKIEVDGQTITLASGEFQIYKQDHSAVVALRIEKINNPDKIDSLINQRSF
                     LVSDLGGEHTAFNQLPDGKAEYHGKAFSSDDAGGKLTYTIDFAAKQGHGKIEHLKTPE
                     QNVELASAELKADEKSHAVILGDTRYGGEEKGTYRLALFGGRAQEIAGSATVKIGEKV
                     HEIGIADKQ"
     gene            complement(16438..17502)
                     /locus_tag="AABD07_000469"
     CDS             complement(16438..17502)
                     /locus_tag="AABD07_000469"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HFB2355061.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAAGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLGKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMASRYAKGELNQIVK"
     gene            17696..18613
                     /gene="xerC"
                     /locus_tag="AABD07_000470"
     CDS             17696..18613
                     /gene="xerC"
                     /locus_tag="AABD07_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HFB2355062.1"
                     /translation="MVLDGFAAYFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQDLSRRDFTAALRRLSQRGLDGRTLARKLSAWRQYCAWLVKRGLMRADP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLESWAAQYGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            18698..20611
                     /gene="dxs"
                     /locus_tag="AABD07_000471"
     CDS             18698..20611
                     /gene="dxs"
                     /locus_tag="AABD07_000471"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HFB2355063.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGGDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGEKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTEHGDPKKLLDDLGLSAEAVER
                     RVREWLPDRDAAN"
     gene            complement(20676..20840)
                     /locus_tag="AABD07_000472"
     CDS             complement(20676..20840)
                     /locus_tag="AABD07_000472"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355064.1"
                     /translation="MPPEAFQTAFCLVSADGTAAVIRTSGINFQTRNGTPSTARKPPP
                     EPFLPPAGFQ"
     gene            complement(20858..22186)
                     /gene="miaB"
                     /locus_tag="AABD07_000473"
     CDS             complement(20858..22186)
                     /gene="miaB"
                     /locus_tag="AABD07_000473"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HFB2355065.1"
                     /translation="MKKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKIVEA"
     gene            22383..22457
                     /locus_tag="AABD07_000474"
                     /pseudo
     CDS             22383..22457
                     /locus_tag="AABD07_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
     gene            22721..22894
                     /locus_tag="AABD07_000475"
     CDS             22721..22894
                     /locus_tag="AABD07_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HFB2355066.1"
                     /translation="MKSERRHWEWCADYDGEGVVRDYRFTHKVEKDERSVIRDTVGVI
                     RKEAGKSLSQPEK"
     gene            22958..24238
                     /gene="hemL"
                     /locus_tag="AABD07_000476"
     CDS             22958..24238
                     /gene="hemL"
                     /locus_tag="AABD07_000476"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HFB2355067.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAEI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGDEIACVIVEPFVGNMNLVRPTEA
                     FVKALRGLTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIQREGFYENLTALTQRLANG
                     IAAAKAHGIEFAADSVGGMFGLYFAAHVPRNYADMARSNIDAFKRFFHGMLDRGIAFG
                     PSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
BASE COUNT         4709 a         6400 c         7643 g         5699 t
ORIGIN      
        1 tcgccgcctt gtcctgattt aaatttaatt cactatattt catatactta tttatctaac
       61 ttttccccgg taacaaggta acaactaagg gtatcgcttc ctagtatagg ttttttccaa
      121 aaacccaaaa aaaccgctct gcatcttgga cggtttcccc ctcgttccct acggttcgtc
      181 agtattcccc gcaagctctt ttccgcttgg cattcctgat ttggtggtcg ttcagcttta
      241 tttttgcggt atttttcgga taccgtaaaa aatcaggtta gttcaattag ggcggattgg
      301 acgggattgc acagtcagga aggggacggc aggataacaa tcagcctgaa atccttgtat
      361 tgattgggat tggttgatgg catcagacag gattaaacga aaaaaaacgc ctagaatttc
      421 taagcgtttt tgtgtgttgg tgccgacagc gagatttgaa ctcgcacagc ctacggccac
      481 taccccctca agatagcgtg tctaccaatt tcaccatgtc ggcatttgaa aaactgttat
      541 ttctgctgct gaggaacagg ggcagaaggt tcggtattgc ttacgggttt gggtgcttgc
      601 tgagtctgtc gtatgttgct gaagtccaaa ccgtgttttg tcgtgtgggt gtgaatatac
      661 accatagcca tgcaggttgc gaagaaaaat gttgctgcaa cggcggtcga gcggctgagg
      721 aagttggcgt tgccggcaga gccgaatacg ccttgcgcgc tgccgcttcc cgatccgaag
      781 gtcgcgccgg catccgcgcc tttgccgtgt tggagcaata ctaacacgat gacggccaaa
      841 gcggaaataa tattaataat ccaaattagg gttttgaagg cttccatatt tttctacgca
      901 ttttgtgcgg cactgatgat ggcggtaaag gagtcgtacg acaatgacgc gccgccgacg
      961 agtgcgccgt ccacataagg tactgcgaag atgtcggccg cgttgtccgc tttcacactt
     1021 ccgccgtaaa ggacgcggat tttaacatcg cttccgcaca aagacaagat ttctttgtag
     1081 atgaatgcgt gcatatcggc aatctgttcg acggtggcga ctttgcctgt gccgattgcc
     1141 cagacgggtt cgtaggcgac ggcgatgttt ttggtatcca gcccttgcag gatggaaagc
     1201 tgatgggcga tgacttcgtg ttctttgccg gtttcgcgct cttcgaggct ttcgccgacg
     1261 cacaataatg ggatgagtcc gacgttgagg acgttttcca ttttgcggcg ttggatttcg
     1321 tttttttcgc cgaaataaag gctgcgttcg gagtgtccga tgaggacgat gtctgtgccg
     1381 gtgtcggcga gcatttcggc ggacacttcg ccggtgtacg cgccgttgtc ggggaagcgg
     1441 ctcacgtctt gggcgcaggt gaggatgcgg ttgtttaaga cgatttgcat ggcgttgtgc
     1501 agttgcagca ggtaaacggt cggggcggcg agtccgatga ggacgcgttc ggcggtgggg
     1561 aggatgcgga agcggtgcat cagtgcgttg ttgttttgga gccggccgtt cattttccag
     1621 ttgccgatga cccatttttg atcccacatt ccgatttggc gatacatctt ttttgctccg
     1681 tgtcgtgttt ttctgtctgc cgcgtgtggc gcgttgcaat gtgaagttta gtggatatgc
     1741 ggcgggttcg caacttgggg cgggcggctg cgggggcggt ttggaatgtt gtttcgggca
     1801 ggatgtttta taatggctgc ctgatatgta tgcaaatatg ggagatatga tgcacgcgct
     1861 tcatttttcg gcttcggaca aggccgcgct ttatcgtgag gtgttgccgc agattgagtc
     1921 tgtggtggcg gacgaggcgg attgggtggc gaatttggcg aacacggcgg cggttttgaa
     1981 ggaggcgttc ggctggttgt gggtgggttt ttattttgtc gatacgcgtt cggacgaatt
     2041 ggttttggca ccgtttcagg gacctttggc gtgtacgcgg attccgttcg ggcgcggggt
     2101 gtgcggtcag gcttgggcga agggtgaaac ggtggttgtt aaggatgtga acgcgcatcc
     2161 cgaccatatt gcctgttcgt ctttgtcgcg ttcggagatt gtcgtgccgc tgttttcaga
     2221 cggccgctgt atcggcgtgt tggacgcgga cagcgaacat ttggcgcagt ttgatgaggc
     2281 agatgctttg tatttgggcg aactggcgaa gattttggag aggcggtttg aggcttcgcg
     2341 tcaggcggct tgagactggc aaaacgggcg ggcttcgcgt gccgaagttg gcgcggcggt
     2401 agtgtggttt tataatgcct gccattgata aaacaattat ttgacggagc actaaatgga
     2461 ttttgaaaaa gcgcggttca atatggtcga acagcagatc cgtccttggg atgtattgga
     2521 ttttgacgtg ttggacgctt tggaggagat tccgcgcgag cttttcgcgg atgagtcttt
     2581 gcagggtttg gcgtatgcgg atatggagct gccgcttgcc aacggtcata agatgctcga
     2641 gccgaaagtc gtggcgcggc tggcgcaggg cttgaagctg acgaaaaacg atacggtttt
     2701 ggaaatcggc acgggttcgg gctatgcgac ggctctgttg gcaaaactgg ctggccgtgt
     2761 ggtttcggac gacatcgatg ccgaacggca aaagcgcgcc aaagcggttt tggacggctt
     2821 gtctttggaa aacatcgatt atgtgcaaaa taacgggttg accgaacttt ccgcaggtgc
     2881 gccgtttgat gcggtttacg tcggcggcgc ggtaaccctt gtgcctgaag tgttaaagga
     2941 acagttgaag gacggcgggc gtatggcggt tattgtggga cgcaggccgg tgcagcgcgc
     3001 gcttttgatt acgcgcaggg gcgatgtgtt tgaagagaag gtgctgttcg atactttggt
     3061 ggcgcatttg gacgacaagg atgcccatcc tttcgacagt tttaattttt gatgttcgga
     3121 ttgtgatgcc gtctgaaagc gggtttgggg cttcagacgg cattttgctt ggtttttttc
     3181 ggggggtttg tgatggatat tgtgcaactt ccgtcggcgg cattgaaggc gtggatggac
     3241 gaagggcgga tgttttgttt gttggacgtg cgtacggatg aagaagcggc ggtttgttcg
     3301 ctgccaaatg cgctgcatat cccgatgaat ctgattccgc tgcggcaaaa cgagttgccg
     3361 gacgatgtgc cgcttgtggt gtattgccat cacggtatcc gcagcctgca tacggcgatg
     3421 tatttggcgg aggcgggttt tgaaaacctg tacaaccttc agggcggcat cgacgcgtgg
     3481 gcggttgagg ttgacgcgga aatggcgcgg tattgaaggc ggcttcagac ggcattcctt
     3541 aaatgcgtgt acctctggtg ttccataaag gtcgtctgaa agtgcagctt ctgcgaagct
     3601 aaagcgcagt atcaacgaag ttaaaatttg cctgaacctt aaaggcagcc tgcaccccaa
     3661 ttccctcgcc ccgtgggaga aggctaggga gagggcggca aactgcaggt ttgcttgggc
     3721 ggcattttca atgtgcaggc tgcttttagc ttcgcagaaa ctccgttttc agacgacctt
     3781 atttaaaccg ataggtaaac gccgcgttca ctgtccgcag tgcgccgtag ctgtggcggt
     3841 cgggctgggt gcggtagtgt ttgttgaaca ggttgtccac gttcagcgac agttcggtgc
     3901 gcggattgaa gcggtaacgc gccatgatgt cggcgacggc gtaggctttc tggcggctgt
     3961 tggcgacggc gcgggctttg gcggcgggat tggggatgtg gagcgcggct gggtcggtgt
     4021 gggtttcgcc ctgccggcgc acacccgcac cgatggtccg gccgctgggg gcttcggggg
     4081 ctaagtggta ggcggtgaag agtttgaagc tgcgttcggg tacgctgtcg gggttcgggc
     4141 ggctgccgtc ttggtcgcgg ggtttgcttt ggctgtagcc tgcctgtatc tgccattcgg
     4201 gcgtgatgcg gccgccgact tcgatttccc agccgtgggt tttggcttgg ttggcggcgc
     4261 ggtagtaggt gttgccgctc tggtcgcgtc ctgctgcggt ggcgaggttg tttttacggg
     4321 cgcggtacac ggcggcggat gcgttcagac gcccttcaag ccattcgcct ttgatgtcgg
     4381 cttccagatt gttgccggtt acgggtttca ggtagctgcc gtgttcgtct ttttgcaatt
     4441 gcgggacgaa caggctgctg tacgagccgt aaagcgacag gttgccggtc agatcgaaca
     4501 cgatgcctgt gtagggggtg aaacggttgg cggacacata ggtcatgcct tgtgtgcggc
     4561 tgttgtagct gcctgcgcgg tagcggctgt atctgccgcc gagtatcagc gaaaggttgt
     4621 cggcggcgcg gaaacgggtg gcgagatagc cgccgatttg ccgcctggtg tcgtattgcg
     4681 ggatggtttg ggcaaacgat gatggctgcg gataggcgcc cgtgcgggaa aattcgtagg
     4741 cgttgggaat ggcgttggga atgatgctgc gttcgccgta tttgttgctg gcgtatttgt
     4801 agccgttgat acccgcgatt aaatcgtgct cgcggccgaa caggcggtat ttgccggtca
     4861 atgacatgct ggcgctgtgg gtgcgcggat cggcgtgcca ataaccggga atcaggtcgg
     4921 tggcggcagt gctgtggtcg atggaaagta cgcctgccac accgtagggc tggcggaagc
     4981 ggctacgggt gtagtcgtat tcggctttga gtttccagtc ttggttgaag cggtgttcta
     5041 tgccggcgaa caggttgagc gcacggttgc ggctgttcga ccaatttgtg gcggggttgt
     5101 cttttgggcc gaaggcggtg gcataacctt ggctgtcgta cacggcgtag ctgagcggcg
     5161 cgtctgcggt ttctttcgcc tgctggtagt ccatgcctgc gtggacgcgg gtttgcggtg
     5221 cgatgtcgta ttccaaaatg ccgtagagtt cggcatcgcg gctgcgttcg agctgccgcc
     5281 acgagtcgcc gcgtccgaag gtggaaacca ggcggccgcg cagcgtgcct tcggcgttca
     5341 ggctgcccga tacgtccgcg cccagcccga aatgtttgcg gttgccggct tcggcgcgga
     5401 cttcaaacaa tggcttgcgg gtcgggtgtt tgcgtaccag attgacggtg gcagaaggct
     5461 cgcccgtgcc gtccggcagc cccgccacgc cgcgcacgac ttccacgcgc tcataggcgg
     5521 cggtgttggc attgcccgta tcggccagcg cgtcggcaac ggggatgccg ttgatttggt
     5581 agttggcgat gcggctgccg cgcgcgaaca ggtagttgta gcccgcgcgg tcggagccgg
     5641 gctggtgccg gtcgcctgca acagggcgcg gtcgagcgtt ttgatgtttt ggtcgcgcat
     5701 ttgttgcgat gtgatgacgc tgacgctctg cgggatttcg cgcagggtca tgggcagccc
     5761 gaacggggtg tgcgtgccgg aaacggtgta gccgtcgttg gaactcgcgg tgcggtcggc
     5821 ggtaacggtg atggtcggca attcggtgct ttcctgcggt ttggggtcgt ctgaaacaga
     5881 aacatcggcc tgcgcgtaca cgggtagcag ggcggcaaaa agcagggagt atttgaagcg
     5941 tgtcatgggg tttcctttgt gtgttggtgt gcggtggggt tgtatagcgg attaacttta
     6001 aaccggtacg gcgttgtccc gccccggctc aaagggaacg attccctaag gcgcccaagc
     6061 accgggcgaa ccggttccgt accatttgta ctgcctgcgg cccgccgcct tgtcctgatt
     6121 tttgttaatc ctctatgctt ttggcatatt gaaggtgtag gctgctttta gcttcgcaga
     6181 aactcagctt ccttcggaaa cttcgttttc aggcggcctc ggacgggtcg ggcagatcaa
     6241 tcagcaccac cgagcagccg ttttccgaac gcgggcggtg cgacaccgac ttcggcacga
     6301 ccgccatctc gccctcgcgt atcgtcatgt tgccgccgtc ggcgaagtcc accgccatgt
     6361 cgccctccac ggcaaacagc actttgtcgc tgtatccgtg cgtgtgccag ccgtaatcgc
     6421 ccaaaagttt gaccaggcgg aattggaacc cgtggcggtt gatgatttcg ggctgccagt
     6481 attctttgat ggcggcaagg tgctgtttca ggttgatggt ttcgttttgc atggggttct
     6541 ccttgtggtt tgttttgaat aaaactactg cgccgcaacg ggttctgcct tttcaaacgc
     6601 cgccttcaac tgttccgccg cctgtatcaa ctgccgcgcg ccgcccgcga caatgtagtt
     6661 cgcggcaggc atgacgatga tttgcttgcg cttccaagcg ttcgtgccgc ataccagcgc
     6721 gttatccaac acttccacgg cagccggccc ttcctgcccg atggcggcgg tgcggtcgat
     6781 gatgaaaatc cagccggggt ttttctcttt gatgtattcg aaggaaacgg gctgcccgtg
     6841 cccttcgttg cgtaaagatt cgtccacggg cggcaggccg atgtcgctgt gtatccaact
     6901 tgccaaccgc gattgcgtgc cgaaggcgga caccttgttg cctgtaaccg acagcaccag
     6961 cccgcgtcct ttgcctttgg cggcttcgcg cttttgggcg aacagcgcgt caatctgcgc
     7021 attcaattcc gccacgcgcg cttccttacc gaaaatccgc gacagggtct ccatctgctt
     7081 ctcgccgctg gtgcggatat tgccgttgtc caccgtcaaa tctatggtgg tcgcgttttt
     7141 cgccaactgt tcatacgctt ccgcacccgg cccgccggta atgacaaact gcggattgtg
     7201 gcggtgcagg gattcgcaat cgggctcaaa cagcgtcccc accgttgccg ccttgtcaaa
     7261 tgcaggctgc aaatagtcca cgcgcaccgg cgcggtggtt gcgcccacat tcacgcccgg
     7321 ctcggtcagc gtatccaacg ccgcccagtc gtacacggcg acgcgttcgg gattcttcgg
     7381 cacaacggca tcgccccgcg cggtcggcac ggtcagcgtg gcgacaggtg tggatgcggc
     7441 ttgggatgcg gcggatacag ttttttcggc ggcaggttcg ggcgaacagg cggccggcag
     7501 gacggcgcag gctgcccaat aaaaacgcgg tttcacggtg tgcggttcct ttgcatacga
     7561 ataagaatgt ttattattaa gcaaacaacc tgcagaaacc acgccgcaaa acgcaaaatt
     7621 cccgatacgg caaaacaaat tcccgaaacg gaaaaggttg tctgaaacac cctttcagac
     7681 gaccttttcc gttccaacca atccctgtgc ttgattattg gtaataattc ctatttaatt
     7741 catttgttag acaactcgtt cctatccaat catgaacacc gccgccatct accgccagta
     7801 ccaaacctat gtccgctccg ataaatccgg ctgggcgttg gacggctgtt ccgacagcgc
     7861 actcattgcg caggcaaaac agcccggttt gcatctgaaa atgtgcatca accgcttcga
     7921 ctcgggcatc accttatcac ggatgcgcgg cggcggaacg ggtgcgtttc ccaccgaaat
     7981 ccacaatttc agccacaact gcgccttgtt cgtcatggta tcggggcaga accggttaca
     8041 aatgggcggc agggaatacc gcccgtctgc cggcgaaatc tggctggtac gcggcgaact
     8101 ggcggacgta tccgaaaccc tgctgccaga cagcggcggc atgtgcgcgc tgcatttgga
     8161 tttttcgctg gaaaaactgc gccgctggca cgacgaaggt ttactggacg aacgcctgtt
     8221 ttcgccgcaa acgataggcc gattcgccct gcaacggctg gcgcaaaacg cggggacact
     8281 gacggcggcg gcctgccccc tgctgcaacg cccgttcgaa tcggacggct tcggcctgct
     8341 cgccgacgaa gccgacgcgc tggaactctc cgcccgatta ttacgcttca ccttccgccg
     8401 ccacgacaac ggctaccgcc gccggcgcat agacgaagcc gccgatattt tgaacagcga
     8461 attcgcccgc ccgctgacca tcgccgaaat cgcccgccgc gtcgggctga acgaatgcta
     8521 cctgaaacgc tatttcaaag cgcaaaccgg cgaaaccgtc gccggacgcc tgcgccgcct
     8581 gcggctggaa cacgcgctcg ccctcatcaa atcgggcagc accatccaag ccgcgatgca
     8641 cttttgcggc taccgccacg cgggacggtt caacgaagcg ttcaggcggc attacggatt
     8701 tttgccttcg gatgtgaaaa agtgctgatg ggccgacggc atagatattt tgatttgaaa
     8761 caaccattaa aaaagatcgt ctgaaaaagc aatttcagac gatctttttt cattcgcggc
     8821 ggcagtgtcg ccccctgccc ttatcccaaa aattctttca aaaacagcaa cacgcaggcg
     8881 agtttgtcgg cggattcgcg ttgggtgccg ttgccggtat ggccgccgcc gtcaggcgag
     8941 tagagccaag attgcggcga ggtttcgcgc agtttggcgt agaatttgag cgcgtgggcg
     9001 ggatggacgc ggtcgtcgct gaggctggtg gtaatgagtg cgggcggata atcgatgccg
     9061 tctgaaagat tgtgatacgg cgacaattcg cccagccggc gtttgcaggc ttcgtatttc
     9121 tgcggattgc cgtattcgtc cgtccaactt gaaccggcgg acagcagcgg ataacggatc
     9181 atatcggtca gcggtacttc gcacaccagc gcaccgatgc tttgcggttc gcgcacgaag
     9241 gcggcggcgg taatcaggcc gccgttgctg ccgccctgca agccgatgtg tttgggcgaa
     9301 ctcatgccgc gttcggacaa atcacgcacg actgccaaca aatcatcaac gcttttgtgt
     9361 ttgctgattc cctgcgccgc ctgatgccag cgcgggccga attctccgcc gccgcggatg
     9421 tttgccaata caaaggcatt gccctcttcc agccaatatt tgccgacgct gcccagataa
     9481 tgcggcaatt caggaatgcc gaaacctccg taagcataga ctaaggtcgg cgtgtcgggc
     9541 gcggcgtttt tgccgacgtg gaaataagga atgcgttcgc cgtcggacga caccgcccaa
     9601 aactgccgca cttcgatgcc gtctgaaaca aactgctgcg gctggaggcg catgacggtc
     9661 agttccatca cgttcaaatc cagcgcaaac agcgtcagcg gcgtggtgaa atcgctggcg
     9721 gcaagataaa ccacgtcgcc gccccacggt tggtcggtca tttccaacgc gcccgagggc
     9781 aggtgcggca actcggcttc ctgccatttg ctgtcggcaa accgccacgc tttcagacgg
     9841 ccttgtacat tctccagcag gcttgccacc acaaaacgct tggtcgtttc cacgctttcc
     9901 aatgcctgcg tttcatcggg cgcaaacaaa agctgcgccg ccccgagttc gccccgattc
     9961 agtttcaccg ccaccaacgc gccactcgga tagctttggt tcgcgcggtg ccagtccttg
    10021 cgcagcgtca gcaaaagatg tcccgccaga tagccgacca catcgcaatc attaggcagg
    10081 ttcaacggtt tcgccccgcc ttcggacgac acctgcaaat acgtcttggt gtaaaaaccg
    10141 tccgacgctt caatcaaatc aatcggcgaa ccctgcggat cgaggtaacg ccacgcgttt
    10201 accatcatcg cgcctttatc gatttggtac gccggcaggc tttcctcgaa actcttgccg
    10261 cgttccacca gccacacttc gcgcggatag cccgattcgg tcaactggcg ttcgtcccaa
    10321 gccggacaca cccacacgct gttttcatcg cgccacgaca catggttttt gcctgccgga
    10381 aagtgaaaac cgccctctac caattcccct gcttccaaat ccacttccag cgtatacgcc
    10441 gtatcgccgc ccgatttgtt caaagtcagc agcgcgcggt tgggctgctc caccaagtgc
    10501 gacacgccgc ccaaatacac atcgtcgccg agcaactcat cgaaatccgc caccgaaaac
    10561 aggattttcc actcgggata gccggaacgg taggtcgccg ccgtacacat gcggtacacg
    10621 cccttcggat attccgcatt ctgatggaaa tggtacatcc gcgcgcggtg ttcctgacaa
    10681 aacggaatct gccgcgtgtc ctgcatttga ttcaaaatgc cgtctgaaag tgcgcgcgcc
    10741 ttgtcgtttt ctaaaaaacg cgcgcgcgtt tcggcattcg cttcagcagc gaagttttgc
    10801 gtttcggcgg aatcgaggtt ttcaaaatgg cggtaggggt cggggtagga tttcatcggg
    10861 gtccttgagg gtcgggcagg tctttgtcat cggggaaatg ccgtctgaaa cggggttcag
    10921 gcggcatttc tgcggcggct ttccgttgcg gtcagcggtg caggcgacgc accagaatat
    10981 gcgggtttcg tccgttgctg cggtagtctt tgcgccgcgt ttcgggcagc tcgtcttccg
    11041 atgccgtctg aaagccgcgt tcggcaaacc attcgccggt atttgtggac agtgcgaaca
    11101 gcctgcttat gcctatgccg cgcgccttat cgataatgtg ggcaagcagg cgttcgccgt
    11161 agccgccgtc ctgtgcctgc ggcgagacgg caaggcaggc gatttcgccg caatcggctt
    11221 cggcaaaggt tttgagtgcg gcacagccgt acaggttgcc gtcgtgttcg aggatggaaa
    11281 attcggaaat gtggttttcg aggtattcgc ggctgcggtg caataggatg ccctgttctt
    11341 ccagcgggcg gatgagggcg gcgatgtgcg ggatgtcgcc gctgtgcgcc tgccggatgg
    11401 agacgaaggc ttctttggca atggacgtgc cgatgccgtt gcgggtgaag agttcttgca
    11461 gcaggctgcc gtcggcggcc ccgttgagga tttggacgcg atgcacgccg ccttcgagcg
    11521 cggcaacggc ggacgaaatc agtcgtcggg tttcgctggc ggcgtgttcc gccagcgatt
    11581 gcgcttcctg tgccgagagg gtttcggcga gcgtgccgtc ggggcgggaa atgccgtctg
    11641 aaagggtcag gtaaacgagt ttttcggctt gaagcgagac ggcgacggaa gcggcggcct
    11701 gcaccatatc gagattgaag gttttgccgc cgtaggaatg cccgagcggc ggcatccaga
    11761 cgatattgcc cgcgtcgagt tggaaacgga gggcggcggt gtcggttttg cggataacgc
    11821 ccgcgtattc catatcggtt ccgtcaatca cgcctatcgg acgggcggtc aggaagttgc
    11881 ccgatacgag cgggacggaa ggcgcgcgcg cgaatcctga aacgctgccg cacaatgcgg
    11941 cttcaaaacg gctgcggacg gtgccggcaa actgctgcgc ctgtccgagc gaggtttcgt
    12001 cggtaacgcg caaaccccgg caataatgcg gcgtgcggcc ttgcgcggcg gcgaggcggt
    12061 cgaggaagtg gtacgcgccg tggatgagga cgagtcggat gcccagttgc gacaacagcc
    12121 cgatgtcggc ggcgagctta tttaaggtgc cgccttcgag caggcggccg tctatgccgg
    12181 cgaccagtgt cgtgccgcgc atttggcgga tgtagggggc ggcttcgcgg aagtgggcga
    12241 caaagctgtc gggcgcgttc ataggatgaa gaggtaggaa agctgcataa tgaggacgat
    12301 aagtgcgaac agggttgcaa tagtccagtt gagcccttcc tgacgggcgg gcggtacgga
    12361 aacctgcggt gcggcggcag gtgcggcagc ggcggttgcg ggcggcgtat cgtgcagggt
    12421 tgtaccgccg ttgaggatat cggcgatttc gtcgcgggaa atctgtttct tgctaatggc
    12481 gtgcgtgccg atgcggtgga cgagtttgac atccgaaaca gcttcgggca aatcgttgaa
    12541 tataggttct ttcgtgcttg ccagatggtc tttggcttta aacagccctt cgcatttttg
    12601 gcagacgacg aagccttggg cgacgttgag ctgggtttct ttgacccaga ggcgggtttt
    12661 gcagtgcgga cagaaacagg cgggcatgat gttttctcgg tgtgtgtcgg tttgatgccg
    12721 tctgaagcgg caggtggttc ggacggcata tgctttattc tacgccgtac tgccggcggt
    12781 aggtgcggac gggttcgagg aactgtccga attcggggtt gttttgcaac aggataaaca
    12841 aatcgttcag gctggcgatg ggggcgacgg gcaggccgta ttgtttttcc acttcctgaa
    12901 cggcggacaa tttacccgtg cctttttcca tgcggtcgag cgcgatggcg acaccggcgg
    12961 gggttgcacc ctccgcttca atcagtttga ttgattcgcg tacggatgtg ccggcggaaa
    13021 tcacgtcgtc gataatcagc acgcgccctt taagcggcgc gccgaccaac acgccgcctt
    13081 cgccgcggtc tttggcttct ttgcggttgt aggcaaacgg gacgttcacg cctttttccg
    13141 ccagcatcat cgcggttgcc gccgccaaaa taatgccttt gtaggcgggg ccgaacagca
    13201 tatcgaatcg gatgccgctt tcaatgatgg attgtgcata gaattttgcc agttgcagcg
    13261 tggacgcgcc gtcgttgaag aggccggcat tgaagaaata gggcgaccgc cgtccggctt
    13321 tggtggtaaa ttcgccgaat ttcaaaacat tttgggcgag ggagaatttg aggaaatctt
    13381 ggcggaaatc agtcattttg tgctttctgt cagatattgg gacgcagttg cgattctacc
    13441 gccccgtgcg gcgcgcttca actgccgccg ccttgccgca aggcgcgttt caactgtttc
    13501 aacacctgcc agtttcgggc tttgagttcg ggttggcgca acagccgggc gggatggtcg
    13561 atgatgaaga agggacggct gccgcacaaa gtttcaatca tcgcctgccg ttccaggttg
    13621 acaaacgcct gtccgaggaa taggacggcg ggggcgcggc agccgtcgag ttccccggcg
    13681 atttgaccca gcgcatccgc gacggcctgt tcagacggca tcgggttacc gacggcggcg
    13741 gttttcaccc aacaggtttt gtggacatag gcggcatcca gtcctgcggc tttgaggatg
    13801 ttgtcgagca ggatgcccgc tttgccgtgg aacagttgcc cgtaaaccgc atcctcgatc
    13861 ggcggacaca ggctgacgac ggcaagcttg gtaatgcccg aagcggcggg aacgggggcg
    13921 atgccgtctg aaaggccggg cgggggcgtt tcggtttcag gcgcgggttt gcgcgtatgt
    13981 acggcggcgg tttccaacgc tttcatcgtt tcgagccgcg cctgaacgtt atggggttgg
    14041 gaagggcgga tcgtggcggc gcggacggtt tggggacgtg cctgtgccgg ggttgcgggt
    14101 gtgtttttgg gcggcaggac ggcggcggcc tgtttcagcc acatcggacc caagcccaaa
    14161 gcctcgtgca ggtggaggta gcgcgcgctt aacatatttt ctccattaag acggcatctt
    14221 cggtttgccc gtcggcggcg cagtaatagt ttttccgcct gcccgcaatg ctgaagccgt
    14281 gtttggtata cagtgcctgt gcggcggcgt tgcctgcgcg gacttcgagc agcaggcgtt
    14341 gcgtgccttc gggcagatgt gcgtaccaat attcgagcag ggcggacgca acgccccgtc
    14401 ggcggcattc gggcgcggtg gcaatcaggt gcagttcgga ttcgtcgggc aggttctgcc
    14461 aaacgataaa ggcggcaatc ctgccgtctt tttccgtaag gaaaacctgt tcggacggcg
    14521 aaacaagcgc ggactcaaat tggcgttgcg tccacgcgga cgggttgcag acggtatcga
    14581 gcgcggccag tgcggcgcag tcggacggta aggctgggcg gatgttcatg ttcgtgcctt
    14641 ccgttccgcc tgttctttgg cagtcagggc gattttgttg cggacgtaga gcagttcggc
    14701 gtgtgccgcg ccagttgcgg gatagccgcc gccgagggcg agcgcgagaa aatcggcggc
    14761 ggtcggcata tcgggtttgc ctgagaaggg cggacggttt tccagtgcga acgcactgcc
    14821 gatgccgtct gaaaagacgt acccctcggg gagggcaatg tctgccgccc taccgacttg
    14881 ataatcgctc aaacggcggc ggttcagcgt gtcgaaccac gcataaaaca cttcgcccat
    14941 acgcgcgtcc gcagcggcga gtatgcagct ttgcggcggc ggcagcgagg cggcggcatc
    15001 gagcgtgggg atgccgatta aaggcgtgtc gaacggcgtt gccaaacctt gcgccacgcc
    15061 gatgccgata cgcagtccgg taaacgcgcc ggggcctttc gcataaacaa tcgcccccaa
    15121 atcggcggcg gtaatgcccg catttcggaa tagggtgcgg atttccggca ggatcagttc
    15181 ggactggcgg atgccgactt cctgatggaa cagacggatt tcgccgtcgg cgcgcagcgc
    15241 gagcgacaaa taggaagttc cggtatcgac ggcgaggacg gggcggttga aatcggcttg
    15301 catggtgtgg ttctcgttgg ttcagacggc attatatagt gaaatcggct tgcctgccgt
    15361 gtcgtcgtgt cctagggcgg tatggcgcaa aaatgccgtc cgaacggtaa attatcgtgt
    15421 tcggacggca tttttcaaat actactgttt gtcggcgatg ccgatttcgt gaaccttttc
    15481 ccctatcttc acggttgccg agccagcgat ttcttgggcg cggccgccga aaagggcgag
    15541 gcggtaagtg cctttctctt cgccgccgta gcgcgtgtcg cccaaaatga cggcgtgtga
    15601 tttttcatct gctttgagtt cggcggaggc aagctcaaca ttctgctcgg gtgttttcag
    15661 gtgttcgatt ttgccgtgtc cctgtttggc ggcgaaatct atggtatagg tcagttttcc
    15721 gccggcatcg tcggagctga atgctttgcc gtgatactcg gctttgccgt caggcagttg
    15781 gttgaaggcg gtatgttctc cgcccaaatc gctgacaagg aaggagcgtt ggtttatcag
    15841 gctgtcgatt ttgtcggggt tgttgatttt ttcaatccgt agggcaacga cggcggagtg
    15901 atcctgtttg tatatttgaa attcgccgct tgccagtgtg atggtttgtc cgtccacttc
    15961 gattttttgc acgaagtcga agcggctgat tttgtcgttc ttcagtttgc ccgtgttgag
    16021 gctgttgtct ttgccgccgg ctttgaaagt tttttccgca ccttgtgccg acagggtcag
    16081 tgttccgttt tggggaatgg aggcttccaa tgttagggat ttcaaacctt tgtctttatg
    16141 gtcgagcggc gcggttaatg catcggcaag ccccgtgccg atgtcggcgg cgacaccacc
    16201 gcctccgccc ctccgctgct gcaggcggtc agaatcaggg ccggcggtca aagaaaggca
    16261 gcagaaggta gttcggttca caggtttact cctagtcata cacagaatag ataatatata
    16321 aacgttttgg ttatggtatc tttttttgca tactgcatca atgaggcagg tcagagaagc
    16381 aaaaatcaaa tgccgtccga acggcgttca gacggcattt tgtttacagg caacctgtta
    16441 tttgacgatt tggttcaatt cgcccttggc ataacggctt gccatttttt ccaacgaaac
    16501 aggtttgatt ttgcctgcct gaccttcgca accgaacgca agataacggt cgaggcagat
    16561 ttgcttcatc gcttcaatgg ttttgcccaa gtatttgcgc ggatcaaagt cggacgggtt
    16621 ttcggcaagg tagcggcgta ccgcgccggt ggaagcgagg cgcaggtcgg tatcgatgtt
    16681 gactttgcgc acgccgtgtt tgatgccttc gacgatttct tcaaccggca cgccgtaggt
    16741 ttcgccgata ttgccgccgt attcgttgat gactttcagc cattcttgcg gaacggagct
    16801 ggagccgtgc atcacgatgt gtgtattggg cagggcttgg tggatttcct tgatgcggtc
    16861 gatacgcaat acgtcgcctg tgggcggacg ggtgaatttg tatgcgccgt ggctggtgcc
    16921 gacggcaatc gccaatgcgt caacgccggt atctttaacg aaacgcacgg catcttcaac
    16981 gctggtgagc atttggtcgt gtgagagttt gcctgccgcg cccactccgt cttcttcgcc
    17041 tgcttcgccg gtttcgaggt tgcccaatac gccgatttcg ccttcgacgg acacgccgca
    17101 ggcgtgggag aagttgacga cggtacgggt ggcgttgacg ttgtattcgt aagaagaagg
    17161 ggttttgccg tcttcgagca aagagccgtc catcatcacg gaggagaagc ccagttggat
    17221 ggagcgttgg cacacgtcgg gcgatgcgcc gtggtcttgg tgcatcacga cggggatgtg
    17281 cggaaattct tcgactgccg ccagaatcag gtggcgcaaa aacggcgcgc ccgcgtattt
    17341 gcgcgcacct gcgctcgcct gtacgatgac gggcgcgttg acttggtcgg cggcttccat
    17401 aatggcgcgc atttgttcga ggttgttgac gttgaacgcg ggcaggccgt agctgttttc
    17461 ggcggcgtgg tcaagcagtt ggcgcatgga tacgagtgcc atttgtgtct ccttgggcaa
    17521 taggtaaata aggcggatta taatgttttt tacggcaaaa aaccataaac ggctcattga
    17581 ttttatatta acgataacgg cgggcagatg gggcggattt tgggcggttc gggattttgg
    17641 tgtgttgttt atgataatgt tttcactggt tttttgatat ttgtgtggga cggttatggt
    17701 tttggacggg tttgcggcgt attttgacgc ttatttggaa aacatcgtgc gcgagggcaa
    17761 gtcggagcac acggttgcgg cataccggcg cgatttggaa gaactgtttg cactgttggc
    17821 acaaatgccg tctgaagatg caggcggcgt gccgcaggac ttgtcgcggc gcgattttac
    17881 ggcggcgttg cggcggctgt cgcagcgcgg tttggacggt cggacgctgg cgcgcaagct
    17941 gtcggcgtgg cggcagtatt gcgcctggct ggtcaaacgc gggctgatgc gcgccgaccc
    18001 gaccgccgac atcaaaccgc cgaagcagcc cgagcgcgta cccaaagccc tgccgcagga
    18061 atggctgaac cggatgttgg atttgcccgt ggacggcggc gacccgctgg cggtgcgcga
    18121 ccacgcgctg ttcgagctga tgtacggcag cggtttgcgc gtgagcgaga tacacggctt
    18181 gaatgcagat gatgtatatt tggacgaagc gtgggtacac gttaccggca aagggcgcaa
    18241 gcagcgtcag gttccgctga ccggcaaaag cgtggaagcc ttgaaaaact atctgccgct
    18301 gcgtcagacg gcatcggacg gcaaagccct gtttaccggc aggaacggca cgcgcctgag
    18361 ccaacgccaa atccaaaaac gcctcgaatc gtgggcggcg caatacggcg acggcaggca
    18421 cgtttcgccg catatgatgc gccacagcta cgccggccac ctgttgcagg cttcgcgcga
    18481 catcagggcg gtgcaggagc tgctcggaca cagcagcctt tcgaccacgc agatttatac
    18541 caagctcgat ttcgaccaca tcgcccgcct ctatgacgaa gcccacccgc gcgccaagcg
    18601 gcaggacgaa tgacgtacgg caaaatcagc cgtcagccgc acgctcttga tatataattg
    18661 accgttgcac ccggacgaca cataaaaaag acacaccatg aacccaagcc ccctactcga
    18721 cctgattgac agcccgcaag atttgcgccg cctggacaaa aaacagctgc cgcgccttgc
    18781 cggcgagttg cgcgcctttc tgctggaatc tgtcgggcag accggcgggc atttcgccag
    18841 caatctgggt gcggtcgaac tgaccatcgc cctgcactat gtgtacgaca cgcccgaaga
    18901 caagctggtg tgggatgtcg gacaccaaag ctacccgcac aaaatcctga caggcaggaa
    18961 aaaccagatg cacaccatgc gccaatacgg cggtttggcg ggttttccga aacgttgcga
    19021 gtccgagtac gacgcgttcg gcgtggggca ttcctccacc tccatcggcg cggctttggg
    19081 catggcggcg gcagacaaac tcttgggcgg cgaccgccgc agcgtcgcca tcatcggcga
    19141 cggcgcgatg acggcggggc aggcgtttga agccttgaat tgcgcgggcg atatggatgt
    19201 ggatttgctg gtcgtcctca acgacaacga aatgtcgatt tcccccaacg tcggcgcgtt
    19261 gcccaaatat cttgccagca acgtcgtgcg cgatatgcac ggactgttga gtaccgtcaa
    19321 agcgcaaacg ggcaaggtat tagacaaaat acccggcgcg atggagtttg cccaaaaagt
    19381 cgaacacaaa atcaaaaccc ttgccgaaga agccgaacac gccaaacagt cgctgtcgct
    19441 gtttgaaaat ttcggcttcc gctacaccgg ccccgtggac ggacacaacg tcgagaatct
    19501 ggtggacgta ttgaaagact tgcgcagccg caaaggccct cagttgctgc acgtcatcac
    19561 caaaaagggc aacggctaca aactcgccga aaacgacccc gtcaaatacc acgccgtcgc
    19621 caacctgcct aaagaaggcg gggcgcaaat gccgtctgaa aaagaaccca agcccgccgc
    19681 caaaccgacc tatacccaag tattcggcaa atggctgtgc gaccgggcgg cggcagattc
    19741 ccgactggtt gcgattaccc ccgccatgcg cgagggcagc ggactggtgg agtttgaaca
    19801 acgattcccc gaccgctatt tcgatgtcgg catcgccgag cagcacgccg ttacctttgc
    19861 cggcggtttg gcgtgcgaag gcatgaagcc cgtcgtggcg atttattcca cctttttaca
    19921 acgcgcctac gaccaactgg tgcacgacat cgccctgcaa aacctgcccg ttttgtttgc
    19981 cgtcgaccgt gcgggcatcg tcggcgcgga cggcccgacc catgccggct tgtacgattt
    20041 gagcttcttg cgctgtgtgc cgaacatgat tgttgccgcg ccgagcgatg aaaacgaatg
    20101 ccgcctgctg ctttcgacct gctatcaggc ggatgcgccc gccgccgtcc gctatccgcg
    20161 cggcacgggt acgggcgcgc cggtttcaga cggcatggaa accgtggaaa tcggcaaggg
    20221 cattatccgc cgcgaaggtg agaaaaccgc cttcattgcc ttcggcagta tggtcgcccc
    20281 cgcattggcg gttgccgaaa aactgaacgc caccgtcgcc gatatgcgct tcgtcaaacc
    20341 gatagacgaa gagttgattg tccgccttgc ccgaagccac gaccgcatcg ttacccttga
    20401 agaaaacgcc gaacagggcg gcgcaggcgg cgcggtcttg gaagtgttgg cgaaacacgg
    20461 catctgcaaa cccgttttgc ttttgggcgt tgccgatacc gtaaccgaac acggcgatcc
    20521 gaaaaaactt ttggacgatt tgggtttgag tgccgaagcg gtggaacgcc gggtgcgcga
    20581 gtggctgccg gaccgtgatg cggcaaatta aaccgcttga ccgcgccgtc gttatcgggc
    20641 ggcgttttta aacggcgttt gtttctgcgg tttttttatt gaaaccccgc aggcggcagg
    20701 aagggttcgg gcggcggctt tcgggcggtg cttggtgtgc cgttgcgcgt ttggaaattt
    20761 attccgcttg tccgtataac ggcggcggtg ccgtctgccg atacaaggca aaatgccgtc
    20821 tgaaacgctt caggcggcat ttttcggcgt gagggtttta ggcttcgaca attttgccgc
    20881 gcagggaaaa ggtgtaggct tcggtgattt ccaaatcgat catttggttg atcatgtcgg
    20941 gcgtgccggt aaagttgacg acgcggttgt tggcggtacg ggcttggagc tggtcggggt
    21001 cttttttgga gatgccttcg accaggcagc gttgaaccgt gccgatcatg gtttggttga
    21061 tgcgggcggt ttcggcttcg atgacttcgt tcaaggcttc gaggcggcgc actttttctt
    21121 cgtgcggcgt gtcgtccggc aggttggcgg caggcgtgcc ggggcgcggg ctgtaaataa
    21181 acacgaagct caagtcgaag gcaatgtctt tcaccagttt caaggtttgc tcgaactcgc
    21241 gttcggtctc gccggggaaa ccgacgatga agtcgctgct caggcacaaa tcaggacgga
    21301 tggcgcgcag tttgcggatg atggatttgt attccaaagc ggtgtagccg cgtttcatcg
    21361 cgctcaatac gcggtcggaa ccgctttgaa tcggcaggtg caggtgggaa accagtttgg
    21421 gcaggtcgcg gtagcactcg ataatcgagt cggtaaactc gcgcgggtgg ctggtggtga
    21481 agcgcatacg ttcgatgccg gggatttcgt ggacgatacg cagcagggtg gcgaagtcgc
    21541 agatttcgcc gtcgtccatt tcgccgcgat aggcattgac gttttgtccc aagaggttga
    21601 tttctttcac gccttgctgg gcaaggttgg cgatttcggt caatacgtcg ttgagcgggc
    21661 gggagaattc ttcgccgcgc gtgtagggga cgacgcagaa ggagcagtat ttggaacagc
    21721 cttccataat cgacacaaat gccgcgccgc cttcgacgcg ggcgggcggc aggtggtcga
    21781 atttttcgat ttcggggaag gaaatatcga cttgcgacag cccgctggtt tctttgtcca
    21841 caatcatttt gggcaggcgg tgcagcgttt gcggaccgaa aaccacgtca acataaggcg
    21901 cgcgtttgat gatgttttcg ccttcttgcg aggcgacgca gccggcaacg ccgatgatga
    21961 ggccggggtt tttttctttg agcggacgga cgcgccccaa gtcggagaac actttttcct
    22021 gtgctttttc gcgcacggaa caggtgttga acaagatgat gtcggcttcg tcggcttggg
    22081 taacctgttc gatgccgccg tgttcttcgg caaggacgga cagcattttt tcgctgtcgt
    22141 actcgttcat ctggcagccg aaggtgcgga taaatacttt tttcatggtt tgtgtctttc
    22201 tcaggcagcc gtaatcgcgg ggctgatggt tgttggaatg aaaaaatttc agacggcacg
    22261 acgatgccgt ctgaaaatcg gtgcggatta tagcacgatg tgggtttggg aggcaaaata
    22321 ttgttttaaa atatgaattt aatcggtcgg aacggctgta taatgtttgg ctttaacggg
    22381 aggtgtgtgt atgggcggca ttgctgctgt gtgcgtgtac cagcaatttc ggcgacaggg
    22441 aacatcagtt cctgcgttat agtggattaa atttaaacca gtacagcgtt gcctcgcctt
    22501 gccgtactat ttgtactgtc tgcggcttcg tcgccttgtc ctgatttttg ttaatccact
    22561 atatcagacg gaagagggaa tcgcacaaac ggttgttaaa ggcaaaacga cccgggcgga
    22621 ggtagaggca cgtttcggga agcgcaaccc tttcggttgt tatgcctatc acgaggtcag
    22681 cctgccgatt tataattttt tgccgaccaa tttcatctat atgaaatcgg agcggcggca
    22741 ttgggaatgg tgcgcggatt acgacgggga gggagtcgtc cgggactacc gctttacaca
    22801 taaagtggaa aaagacgagc gttccgtcat ccgggatacg gttggcgtaa tccgcaaaga
    22861 agcgggcaaa tccttgtcgc aacctgaaaa atgataaaat ggggctttct gcttccaagc
    22921 ccgaaacctg ccgttcagac ggcatttgag gataaatatg aaccgtaacg aaattttatt
    22981 cgaccgcgcc aaagccatca tccccggcgg cgtgaattcg cccgtgcgcg cattcggcag
    23041 cgtcggcggc gtgccgcgct tcatcaaaaa agccgaaggc gcgtatgttt gggacgaaaa
    23101 cggcacgcgc tacaccgatt atgtcggctc ttgggggcct gcgattgtcg gacacgcgca
    23161 tcccgaagtc gtcgaagccg tgcgcgaagc tgcgttgggc ggtttgtcgt tcggcgcgcc
    23221 caccgaaggc gaaatcgcca ttgccgaaca aattgccgaa attatgccgt ctgtcgaacg
    23281 gctgcgcctc gtcagctccg gcacggaagc gacgatgact gccatccgtc tggcacgcgg
    23341 ttttaccggc cgcgacaaaa tcatcaaatt tgaaggctgc taccacggcc attccgacag
    23401 cctgttggtg aaagcaggca gcggtctgct taccttcggc aatccttctt ccgccggtgt
    23461 gcctgccgac tttaccaaac atactttggt actcgaatac aacaacatcg cccaactcga
    23521 agaagccttt gcccaaagcg gcgacgaaat cgcctgcgtg attgtcgaac ccttcgtcgg
    23581 caatatgaac ctcgtccgcc cgaccgaagc ctttgtcaaa gccttgcgcg gattgaccga
    23641 aaaacacggc gcggtgttga tttacgacga agtgatgacc ggtttccgcg tcgcgctcgg
    23701 cggcgcgcag tcgctgcacg gcatcacgcc cgacctgacc acgatgggca aagtcatcgg
    23761 cggcggtatg ccgcttgccg cgttcggcgg acgcaaagac atcatggaat gtatttcccc
    23821 gttgggcggc gtgtatcagg caggtacatt atcaggcaac ccgattgccg tcgccgccgg
    23881 cttgaaaacg ctggaaatca tccagcgcga aggcttctat gaaaacctga ccgccttgac
    23941 acaacgcctt gccaacggta ttgccgccgc caaagcgcac ggtatcgagt ttgccgccga
    24001 cagcgtgggc ggtatgttcg gtctgtattt cgccgcacac gtgccgcgaa actatgccga
    24061 tatggcgcgc tccaatatcg acgctttcaa acgcttcttc cacggcatgc tcgaccgcgg
    24121 cattgccttc ggcccgtccg cttatgaagc aggtttcgtt tccgccgcgc atacgcccga
    24181 gctgattgac gaaacggttg cggttgcggt tgaagtgttc aaggcgatgg ctgcatgatg
    24241 ttttgacgga cagagtttct ctgttcgatt tgtttggcag attgaagtaa gaatgcacac
    24301 cgccgtcatt tccgcgcagg cgggaatccg gacctttcag tttctgtaat gattgaaaat
    24361 aacggcaagc ccgaccttcc ggattcccgc ctgcgcggga atgacgggcg tgtacatttt
    24421 tgatttcaat ctactgtaaa aatgccgtct g
//
LOCUS       DAWXHA010000014        23295 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.014, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000014 DAWXHA010000000
VERSION     DAWXHA010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23295
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.014"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..120
                     /locus_tag="AABD07_000477"
     CDS             <1..120
                     /locus_tag="AABD07_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HFB2355068.1"
                     /translation="ILAVVPKKAEAISNKLFFTHHPKRQTEFAVGQIRQGRAE"
     gene            248..1543
                     /gene="hisS"
                     /locus_tag="AABD07_000478"
     CDS             248..1543
                     /gene="hisS"
                     /locus_tag="AABD07_000478"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HFB2355069.1"
                     /translation="MAQKIQSVKGMNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEAQLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENSRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGEGADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELADGTVTLKDMNGAHGQQTVSATDLTDTLQQWKNA"
     gene            1544..2173
                     /locus_tag="AABD07_000479"
     CDS             1544..2173
                     /locus_tag="AABD07_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HFB2355070.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELSKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQEKSQEALKNYGQALEKMPQDSVGRELLQMKLDSLK"
     gene            2323..3780
                     /gene="der"
                     /locus_tag="AABD07_000480"
     CDS             2323..3780
                     /gene="der"
                     /locus_tag="AABD07_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HFB2355071.1"
                     /translation="MKPTIALIGRPNVGKSTLFNRLTCTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYFVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL
                     ENFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGI
                     DGLFESIQAAYNAAMIKMPTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            3811..4710
                     /gene="rdgC"
                     /locus_tag="AABD07_000481"
     CDS             3811..4710
                     /gene="rdgC"
                     /locus_tag="AABD07_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HFB2355072.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTRLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            4762..5151
                     /locus_tag="AABD07_000482"
     CDS             4762..5151
                     /locus_tag="AABD07_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355073.1"
                     /translation="MLKHLAFLLPAMMFALPAQTAVLSPYQETGCTYEGGIGKDGLPS
                     GKGIWRCRDGRGYTGSFKNGKFDGQGVYTVAAGREVFLEPFNSDSTKFRNMALSGTFK
                     QGLAHGRFAASQNGETLFYYEMRTRHD"
     gene            5248..5814
                     /locus_tag="AABD07_000483"
     CDS             5248..5814
                     /locus_tag="AABD07_000483"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HFB2355074.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGQRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(5880..6584)
                     /locus_tag="AABD07_000484"
     CDS             complement(5880..6584)
                     /locus_tag="AABD07_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HFB2355075.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGIEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKAEGRDFDALNRFIADVQTDASLEDTDFSVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNFGQIGSHIAGDGAVRAKMLRAMPMAASVNMKGTDSAA
                     PGVEEISISINGMVQF"
     gene            6751..7338
                     /locus_tag="AABD07_000485"
     CDS             6751..7338
                     /locus_tag="AABD07_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFB2355076.1"
                     /translation="MVSTIRTGCGRNIFPKSSTGPPTQRHQNRHPRPHVPLSAERNSK
                     HPDRSLRFCPIPAKRFGHLRMAQHVFLPRFPFIDIDRIRWVRAGLKAFKHYIRENGLP
                     DLIHAHCMNYAGILAQKISEKYGIPYVLTEHSSTITRGLIRHHQWQPMEKAAAPASAR
                     LAVSRHFAHVLQHKYGCEWQYLPNIPGGIFKQTFE"
     gene            7366..7923
                     /locus_tag="AABD07_000486"
     CDS             7366..7923
                     /locus_tag="AABD07_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFB2355077.1"
                     /translation="MFCTVSHLRRLKGHDVLLTAFARALAQCPQLRLNIGGSGQEEQR
                     LKQQAADLGIAHAVTFLGALQPEAILDLMRNSDAFILASRTETFGVVYIEALSQGLPV
                     IAIHCGGAESIVSDGNGYLVSVDDADVLAFLKIYEHHADFSAEQLRTDCLATFGEDAV
                     IGRLIAVFRQAARNTARKRPKNRLK"
     gene            7949..8902
                     /locus_tag="AABD07_000487"
     CDS             7949..8902
                     /locus_tag="AABD07_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HFB2355078.1"
                     /translation="MTHTVHLHLEETDNPTLQRLCGSFDSNLDSLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDSIIRLAAVETQTKDAGHQEKNHEHAYYF
                     RTKRGSIGGRTPRQNGYIRALLDHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVAGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(9007..9330)
                     /locus_tag="AABD07_000488"
     CDS             complement(9007..9330)
                     /locus_tag="AABD07_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HFB2355079.1"
                     /translation="MKKCILGILTACAAMPAFADRISDLEARLAQLEHRVAVLESGGN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCGDEAIR
                     CRKFD"
     gene            complement(9503..10861)
                     /locus_tag="AABD07_000489"
     CDS             complement(9503..10861)
                     /locus_tag="AABD07_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HFB2355080.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNISAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGNAAERYQEDPVRILRAIRLSGKLGFELSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDIHPLLNALRVSDGIAGKM
                     TALALKNTDERLRADKSVSVGFVLAALMWPELDRHWKSNLQQGLKPTPALSDAINTMR
                     ETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAETG
                     NADRALAEWWTAFQTASAEQRTEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVVGTD
                     WE"
     gene            complement(11219..12919)
                     /gene="recJ"
                     /locus_tag="AABD07_000490"
     CDS             complement(11219..12919)
                     /gene="recJ"
                     /locus_tag="AABD07_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HFB2355081.1"
                     /translation="MSVKIQTRPVNTDVFNHLLAAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQSLTNCEAAAGRLADAVERKEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPADTVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLTALRAELRRRNYFSDGIKEP
                     NLGGLLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDSEAQELAARLNNLNIERREIEQSM
                     LRDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTYITDGSLPACDITLEQAQNLACHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRDNLELQLYIDYWEAA
                     "
     gene            complement(12971..13702)
                     /locus_tag="AABD07_000491"
     CDS             complement(12971..13702)
                     /locus_tag="AABD07_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355082.1"
                     /translation="MLFRKTTAAVLAATLILNGCTMMLRGMNNPVSQTITRKHVDKDQ
                     IRAFGVVAEDNAQLEKGSLVMMGGKYWFAVNPEDSAKLTGLLKAGLDKPFQIVEDTPS
                     YARHQALPVKFEAPGSQNFSTGGLCLRYDTGRPDDIAKLKQLEFKAVKLDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFGNILVYAPLVDIGCG
                     GRGAGLAYGSDCSREFLRQMNGNAV"
     gene            complement(13749..14339)
                     /locus_tag="AABD07_000492"
     CDS             complement(13749..14339)
                     /locus_tag="AABD07_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HFB2355083.1"
                     /translation="MQGVRCKKPSERGGILLKYAIGKNSRIKMFEQEDEWISKTQMKK
                     QMNGLQDLGMELTRLSNDTLKKIGLDEDLYEAVVTYKKITSNGALKRQAQFIGRLMRD
                     TDPAPIEAFLAKLRGDDAAHNAFLQRVERARVRLLADEGALTQFMSDFPNAGAGRLRT
                     LVRNTKKEQEQDKPPKNFRALFQELKTVMENGGAEI"
     gene            14409..15740
                     /gene="pmbA"
                     /locus_tag="AABD07_000493"
     CDS             14409..15740
                     /gene="pmbA"
                     /locus_tag="AABD07_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HFB2355084.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADPELMAQHIGDPDLYHEWDLDTEAAVGLAKQCEQAALDTDSRIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQSTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGTLSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLGSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(16039..16242)
                     /locus_tag="AABD07_000494"
     CDS             complement(16039..16242)
                     /locus_tag="AABD07_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006478030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HFB2355085.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            16487..16789
                     /gene="clpS"
                     /locus_tag="AABD07_000495"
     CDS             16487..16789
                     /gene="clpS"
                     /locus_tag="AABD07_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HFB2355086.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            16791..19083
                     /gene="clpA"
                     /locus_tag="AABD07_000496"
                     /pseudo
     CDS             16791..19083
                     /gene="clpA"
                     /locus_tag="AABD07_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
     gene            complement(19123..22221)
                     /locus_tag="AABD07_000497"
     CDS             complement(19123..22221)
                     /locus_tag="AABD07_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HFB2355087.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENRLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPAENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVVVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSGPESGGYVWHTTGSGKTLTGFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSPDSVNGSESTAGLKRNLEKDGNKIIVTTIQKLNNLMKS
                     EDNLPVYHRQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKELSAAENRQALL
                     HPERIREITQYILSRFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGSLH
                     PLKTATIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNREVDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNIVLEKSYEEYMNGYTDSQTG
                     EARRGYLDVAKELHERFPDPDKIETEKDKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QNVDAADEDAMKAFQEKYYLSDEDVQEMRKVPMPSERAVQDYRSAYNDIRDWLRRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEGLNETA
                     AKRYLTGSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGA
                     DI"
     gene            complement(22452..23270)
                     /locus_tag="AABD07_000498"
     CDS             complement(22452..23270)
                     /locus_tag="AABD07_000498"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFB2355088.1"
                     /translation="MQMPQIATPDTDNYKIPIPSLETQQKIVKILDKFTELEATLEAT
                     LEAELALRKRQYRYYRDLLLDFDNQIGGIADGYQCRLKNVVWKTLGEVAEYSKNRICS
                     DKLNEHNYVGVDNLLQNREGKKLSGYVPSEGKMTEYIVNDILIGNIRPYLKKIWQADC
                     TGGTNGDVLVIRVTDEKVNPKYLYQVLADDKFFAFNMKHAKGAKMPRGSKAAIMQYKI
                     PIPPLPEQEKIVAILGKFDTLTHSVSEGLPHEIALRRKQYEYYREQLLAFPKAA"
BASE COUNT         5577 a         6570 c         5796 g         5352 t
ORIGIN      
        1 attttggcgg tcgtgccgaa aaaagcggag gcgatttcaa ataaattgtt tttcacacat
       61 catcccaagc ggcagacgga gtttgcagtc ggacaaatca ggcaagggcg cgcagagtaa
      121 gtcaaatgcc gtctgaaaac tgtttcagac ggcattttta cccgtccgca aaccatctcc
      181 atcctcacaa gcccttaaaa atccgctata atcgcccgca atttgatttc agcaccccct
      241 ttttgaaatg gcacaaaaaa tccaatccgt caaaggcatg aacgaccttc tgcctgtcgg
      301 gcaaaaagat ttcaaactca cggctgtgtt ttggcaggcg tttgaggata cggtaaaccg
      361 ttggacgcga gcttacggtt atcagcaaat ccgtacgccg attgtcgagc aaaccggttt
      421 gtttgtccgc tccatcggcg aggaaaccga tgtagtcggc aaggaaatgt acaccttctc
      481 cgattcaaac gattctttga gtttgagcct gcgtcccgaa ggtacggcct cttgtctgcg
      541 tgcggtggtc gaacacaacc ttctgtacaa cagcccgcaa aagctgtggt atatggggcc
      601 gatgttccgc cgcgagcgtc cgcaaaaagg acgctaccgc caatttcatc aggtcggtat
      661 cgaggctttg ggttttgaag ggccggatat tgatgcggaa atcatcgcaa tgtctgccga
      721 cttgtgggaa aaattgggta ttcgcgaata cctgactttg gaaatcaaca gcttgggcaa
      781 ccgtgaggaa cgcgcggcac accgtgcggc attggttgaa tatctgaccc gctatgaagc
      841 gcaactggac gaagacagca aacgccgtct gaaaaccaat cctttgcgcg ttttggatac
      901 gaaaaaccct gatttgcagg aaatctgcaa tgccgcgccg cgtttggtag attacttggg
      961 cgaggcttcg caaaaccact atgcacgctt caaggcgatg ttggacggtt tgggtattca
     1021 atatattgaa aattcgcgct tggttcgcgg tttggattat tacaatcaga cggtttttga
     1081 gtggacgacc gacaaactcg gcgcacaggc gactgtgtgc ggcggcggac gttacgacgg
     1141 tttgattgaa gaactcggcg gcaagcctgc gccgtccatc ggctttgcga tgggcatcga
     1201 acggctgctg cttttggtga gcgaatacgg ttcgctggaa gtgaacgccg cgcctgatgt
     1261 ctatgcaatg caccaaggcg aaggggcgga cttgcaggtg atgaaatacg cacaagcctt
     1321 gcgcgcgcaa ggtttcaatg taatgcagca ttccggctat caaagcctga aggcgcaaat
     1381 gaaaaaagcc gacaacagcg gcgcgcgctt tgccctgatt gtcgcgcaag acgaactggc
     1441 ggacggtacc gttacgctca aagacatgaa cggcgcacac ggtcagcaaa ccgtttccgc
     1501 caccgatttg acagatactt tacaacaatg gaagaacgca taaatggcag cccatctcga
     1561 agaacaacaa gagttagaca actttaaata tttttggaaa accacgggca aatggctgtt
     1621 tgccctgctg attttggcgg cactcggcta cttgggatac acggtttacc aaaaccgtgc
     1681 ggcttcccaa aatcaggaag cggcggcggt gctggcaaac atcgtggaaa aggcgcaaaa
     1741 caaagccccg caaagcgaaa tcaatgccga actgtccaag ctccaacaaa gctaccccca
     1801 ttccatttcc gccgcccaag ccacgctgat ggcggcggca accgaatttg acgcgcagcg
     1861 ttacgatgtt gccgaaggtc atttgaaatg ggtgttgtcc aaccaaaaag acagcctgat
     1921 tcaggcgttg gcggcgcagc gtctgggcgt tgtgttgttg caacaaaaaa aatacgatgc
     1981 cgcgcttgcc gcactcgaca cgccggttga ggcggacttc gcccccctgc tgatggaaac
     2041 taaaggcgat gtttatgccg cacaggaaaa aagccaggaa gccttaaaaa actacggaca
     2101 ggctttggaa aaaatgcctc aagattctgt cggtcgcgaa ttgcttcaaa tgaaactcga
     2161 ttcgctgaaa taaataccgt ctgaaatgcc gctctctctt cagacggcat ttcagacaac
     2221 cccatcctac ggcaattccc gtaaaaccat ccgccgtgtc ccaacggaca cctgctcgtg
     2281 ttcagttcta ccgaacggca cttgacacag aaagacccaa tcatgaaacc aaccatcgcg
     2341 cttatcggcc gccccaacgt cggcaaatct accttgttca accgtttgac gtgcaccaaa
     2401 gacgcgctcg tgcatgacct gccgggtctg acccgcgacc gccattacgg acacggcaaa
     2461 gtcggcagca aaccttattt tgtcatcgat accggcggtt tcgagccggt tgtggacagc
     2521 ggcattttgc acgaaatggc aaaacaaacc ttgcaggctg tcgatgaagc cgatgcggtt
     2581 gtgtttttgg tggacggccg taccggttta acaccgcaag acaagattat tgccgaccgt
     2641 ttgcgccaaa gtccgcgtcc cgtttatttg gccgtgaata aaggcgaggg cggcgacagg
     2701 gccgtacttg ccgccgagtt ttacgagctg gcattgggcg agccgcacgt tatttccggc
     2761 gcgcacggcg acggcgtgta ttacctgatt gaagaaattt tagaaaactt ccccgagcct
     2821 gaagccgaag aagccgatgc aaaacatccc gtttttgccg ttatcggtcg tccgaacgtc
     2881 ggcaaatcta cgctggttaa cgccattctc ggcgaaaaac gcgtcatcgc cttcgatatg
     2941 gcaggcacaa cgcgcgacag catccacatc gatttcgagc gcgaaggcaa accgtttacc
     3001 atcatcgata ccgcaggcgt gcgccgtcgc ggcaaagtgg atgaagcggt ggaaaagttc
     3061 tccgttatca aagctatgca ggcggttgaa gcggcaaacg ttgctgtttt ggtattggac
     3121 gcgcaacagg acattgccga ccaagatgcg acgattgccg gttttgcttt ggaagcggga
     3181 cgcgcgctgg tagttgccgt caacaaatgg gacggcatca gcgaagagcg gcgcgaacaa
     3241 gtgaaacgcg acatttcccg caaactgtat ttcctcgatt ttgccaagtt ccactttatt
     3301 tccgcgttga aagagcgcgg tatagacggt ttgtttgaaa gcattcaagc tgcctacaac
     3361 gcggcgatga ttaagatgcc gacgccgaaa atcacgcgcg tattgcaaac cgccgtcgga
     3421 cgccaacagc cgccgcgtgc cggcttggtg cgtccgaaaa tgcgttatgc ccaccaaggc
     3481 ggcatgaatc cgccggtgat tgtggtacac ggcaattcgc tgcacgcgat ttccgacagc
     3541 tatacgcgct atctgaccca gaccttccgc aaagccttca acctgcaagg cacgccgttg
     3601 cggattcaat acaatgtttc ggaaaacccg tatgaaaatg cggaagacaa accgaagaaa
     3661 aaaccgctgc gccgcgtcag cctgagcaac cgtattgaga aacgcgaagg ccgaaaggaa
     3721 gagaaaaacc gcttcaagaa gaaaaccaaa gtcagtgtga aaaaacaatt cagcaaataa
     3781 ttcccgacat ttcaaacaat aggaaacatt atgtggttca agcagattag tttttatccg
     3841 ctcaacaaag aaaagctgcc tgaggcggac gtacttgccg ataaacttgc tgaagctgaa
     3901 tttacccatt gccaaggttt ggactggttc agcgaaggct ttaccgcacc ggtttctttt
     3961 tcgcccgaac tcgttttccc tgccgacttt accttgcgcg tcgccctgaa aaaagaggaa
     4021 aaagtcctgc ctgccggcgt catccgcgat attttggaag agaaggtagc ggaaatccaa
     4081 aacaatgaag cccgcaatgt cggtcgcaaa gaaaaacaag agcttaaaga gcaaattaca
     4141 gacgacctgc tgccccgagc gtttacccgc agcagccgta cagaagcggt gtttaacacc
     4201 cgccacggct acctgctcgt caataacgcg gcttccgcca aagcggaaaa catcctgacc
     4261 aagctgcgcg aagctttggg aggtttggaa gcctcgctgc cgaataccaa acaatcgccc
     4321 tcttccctga tgaccggctg gctgttgcaa gggcattgcg aaggcggttt tgaattagac
     4381 agcgattgcg aactcaaagg tacgggcgat attgttcccg tcgtcaaagt atccaaacaa
     4441 gacttaaccg ccgacgaagt ggttcaacac gtcaaaaacg gtaaaaccgt tacccggctc
     4501 ggtttggttt ggcgcgaaca aatcgccttt atcctcactc aagacttcac actcaagcgc
     4561 atccaatacc tcgacgtatt gcaggaagaa gccgaaagca acggcgacga tgccgccggc
     4621 cttgccttcg cctcgcaaat cctgatggcg gaatccgtca gcaccatgtt ggaagagctg
     4681 gtttcctatt tgggcggctg gcaagattga tttttcagac ggcttttata ccgtcagcca
     4741 aaatccaatg gaataaccct tatgcttaaa catctcgcat tcctactgcc cgccatgatg
     4801 ttcgccctcc ccgcccagac cgccgtccta agcccctatc aggaaaccgg ctgcacctac
     4861 gaaggcggga tcggaaaaga cgggcttcct tcaggcaaag gcatatggcg ttgccgggat
     4921 gggcgcggtt ataccggttc attcaaaaac ggcaaattcg acgggcaagg cgtttatacc
     4981 gttgccgccg gccgcgaagt atttctcgag ccgttcaatt ccgacagtac caaattccgc
     5041 aatatggcat tgtcgggcac gttcaaacaa ggcttggcac acggcaggtt cgccgcctcg
     5101 caaaacggcg aaaccctctt ttattatgaa atgcgaacac ggcatgatta aagaagtgaa
     5161 actgcccaaa aacaaataac cccccccgtt tttcaaacag catcccccaa tgctttatcc
     5221 gaacaccgca aaaaacaagg aaaccccatg agcatcaagt ccgacaaatg gatacgccga
     5281 atgagcgaag aattcggcat gattgatccc ttcgagccga accaaatcaa agaagccgac
     5341 ggacagcgca tcatctccta cggtacgtcc agctacggct acgatatccg ctgcgccaat
     5401 gaatttaaaa tttttaccaa catcaacagc accatcgtcg atcccaaaaa cttcgacccg
     5461 aaaaatttcg ttaccgtcga agacgactgc tgcatcatcc cgcccaattc cttcgcactg
     5521 gcgcgcacgg tcgaatattt ccgcattccg cgcaacgtcc tgaccgtctg tttgggcaaa
     5581 tccacctacg cccgctgcgg catcatcgtc aacgttaccc cgttcgagcc ggaatgggaa
     5641 ggctacgtta ccctcgagtt ttccaacacc acccccctgc ccgccaaaat ctacgcaggc
     5701 gaaggcgtgg cgcaagtcct cttcttcgag agcgacgaag tgtgtgaaac ttcatacaaa
     5761 gaccgcaacg gcaaatacat gggacaaacc ggcgtaaccc tgcccaaagc ctgaaataca
     5821 aaatgccgtc tgaaccctta tcgtcgggtt tcagacggca tctacctatt tatccgtggt
     5881 tagaactgaa ccatcccatt gatgctgatg ctgatttcct ccacacccgg tgcggctgaa
     5941 tccgtaccct tcatattgac gcttgccgcc atcggcatcg cgcgcagcat ttttgcccga
     6001 acagccccat cgcccgcaat atggctgccg atttgcccaa aattcaattt gacgatttta
     6061 taaccggacg cacccagaac gcccgccagt ttttcggcac gcgccttgaa acgcaaaacg
     6121 gcatccttgc tgacctgatc gatgacctcg tttcggcgtt cgcgcgacac gctgaaatcg
     6181 gtatcttcaa gcgaagcatc cgtctgaaca tcagcaataa aacggtttaa agcatcaaaa
     6241 tccctgccct ccgccttaaa ttccgcacgc tcctcccagc ctgtttgaat gcgtctgccg
     6301 ttggtatatt gatagcgcgg catcgcactg cgcgatacca attcggtttt aaagctacca
     6361 tttttcgatt ttctggtgaa attgttgaat tttttaacaa actcggcatt gacggcattt
     6421 ttgtcccgtc cttccgccgc cacctggaaa cgcgcggaca ttgtatcctg agccacctcg
     6481 atacccgccg attcggaaaa ttcgacaata ttgtaattca atgcctcagc cgccgccgga
     6541 aaagataccg ccagcaggga agccgccaaa atagaacgca gcatatccgt atccttactt
     6601 gaaaaaccgc caatctaaca tataggtacg ctaaattgcg ttagcataag acaacaattt
     6661 aaatattcga tcggtctgcc ttataataac cgtctttccg atactgaatc atattatgtc
     6721 cgaaccgttg cacgtcctcg tcatcccctt atggtatcca cgatccgaac aggatgtgga
     6781 cggaatattt ttccaaaatc aagcacaggc cctccaacgc aaaggcatca aaaccgccat
     6841 cctcgccccc atgttccgtt atctgcggaa agaaacagca agcatcctga ccggtcctta
     6901 cggttttgcc cgataccggc aaagcggttt ggacatctac gcatggcgca gcatgtattt
     6961 cttccccgct ttccgtttat cgacatcgac cgcatccgct gggtgcgcgc cggtttgaaa
     7021 gccttcaaac actacatccg cgaaaacgga ctgcccgacc tgattcacgc ccactgcatg
     7081 aactatgcag gcatacttgc ccaaaaaatt tccgaaaaat acggcattcc ctacgtttta
     7141 accgaacaca gcagcaccat cacgcgcggt ctgatccgtc accaccaatg gcagccgatg
     7201 gaaaaagcag cggcgcccgc ctccgcacgt ctcgccgtca gccgccattt cgcacacgtc
     7261 ctgcaacaca aatacggctg cgaatggcag tacctcccca acataccggg tggaatattc
     7321 aagcaaacat ttgaataaaa agaaaaaaat aacaaaccgc atttcgtgtt ctgcaccgtc
     7381 tcgcaccttc gccgcctcaa aggacacgat gtcctgctca ctgcttttgc ccgggcgttg
     7441 gcacaatgcc cgcaactgcg cctgaacatc ggcggcagcg gacaggaaga acagcggctg
     7501 aaacagcagg cggcagactt gggcatcgcc catgccgtta catttttagg cgcactgcaa
     7561 cccgaagcaa tcttggattt gatgaggaac agcgacgcct tcatcctcgc cagccgcacc
     7621 gaaaccttcg gcgtggtcta tatcgaagcc ctctcgcaag ggttgcccgt catcgccata
     7681 cattgcggcg gcgcggaatc catcgtttca gacggcaacg gatacctcgt ttccgttgac
     7741 gatgccgatg tcctagcctt tctcaaaata tatgaacacc atgccgattt ttccgccgaa
     7801 cagctcagaa ccgactgcct cgcaacattc ggcgaagatg ccgttatcgg cagactgatt
     7861 gccgtattcc gtcaggcggc gcggaacacg gcgcgaaaac gcccgaaaaa tagattaaaa
     7921 tgacgcaaaa caaccttcgg attcaaatat gacccatacc gtccacctgc acttggaaga
     7981 aaccgacaac ccgacgctgc aacgcctgtg cggttctttc gacagcaacc tcgattcgct
     8041 cgccaaagca ctcgacatcc atatcagccg ccgtttcgag cattttacct tcaacggtgc
     8101 atttgcacac gccggcaaac gcgcactgct caaactcttg gaaacggcgc agacgcgcga
     8161 cctaaacgac agcatcatcc gccttgccgc cgtcgaaacc caaaccaaag atgccgggca
     8221 tcaggaaaaa aatcacgaac acgcctatta tttccgaacc aagcgcggca gcataggcgg
     8281 cagaacgcca cggcagaacg gctatatccg cgccctgctc gaccacgaca tcgtattcgg
     8341 cctcgggccg gcaggtacgg gcaaaaccta tcttgccgtc gccgccgccg tcgatgcgat
     8401 ggaaaaacac caagtcgaac gcatcatttt agtgcggcct gccgtcgaag ccggtgagaa
     8461 actgggcttc ctgcccggag acctgaccca aaaagtcgac ccctacctcc gtccgcttta
     8521 tgatgccctc tatgacctga tgggctttga ccgtgtaacc aagctgattg aaaaaggcct
     8581 gattgaaatc gccccgctcg cctatatgcg cggcaggacg ctcaacggcg catacatcat
     8641 cctcgacgaa gcgcaaaaca ccacgcccga acaaatgaaa atgttcctga cccgcatcgg
     8701 cttcggcgcg aaagccgtca ttaccggcga caccagccaa atcgacctgc ccaaaaacat
     8761 caaatcggga ttgaaagacg cacgtgagaa actgcacggc gtggcaggac tgtatttcca
     8821 taccttcacc ggcgaagacg ttgtccggca tcctctggtg caaaaaatcg tcgaagccta
     8881 cgaatcggca gaacacgact gacactccaa tgccgtctga aacccgatgc atggaaaatc
     8941 gggcagagaa aaacagagac ggaagccaag ctccgtatcc gtttctttat ccgtccaacc
     9001 gatacatcaa tcgaattttc tgcatcggat tgcctcatct ccgcaaaaca ttgccgaagt
     9061 ttcgcggttg cacgcctgac gcactttctg ccgcgccacg ccttcattcc gatcgcttgc
     9121 ctcaaacgtc ttctgaaaag gcgtaacgct gcatacatac atggtggaat ttgaaccgaa
     9181 aaggtcgatt ttcacggtat tgccgccgct ttccaatacg gcgacacggt gttccaactg
     9241 cgccagacgt gcttccaaat cgctgattct gtcggcaaat gcaggcatgg cggcacacgc
     9301 ggtcaaaatg cccaaaatac attttttcat caatttttcc ttgttgcttg aaccctgccc
     9361 acccggacat cctttttccg ggcggcaggg tcagacttta tttgcaggga tgaagcccct
     9421 tacaaatcag aataatacat gaatcggcac tttatgcttc atcctatgtg ttgaaacttc
     9481 attgctcctt gtctgttgac cgttattccc aatccgttcc cacaaccttc ggcttgggtt
     9541 tgcgcctgcg acggcggcgt tttttcgcct gtccttcgtt tttttcgtgc cgggcggcgg
     9601 cctcgttttt ggtcatttcc gtccgctgtt ccgccgatgc cgtctgaaac gccgtccacc
     9661 actcggcaag tgcgcggtcc gcattgccgg tttcggcgcg caagagcagg aaatcatagg
     9721 cggcacggaa acgcgcctgt gcaaacagtt tgtgcggacg tgcgcctttg cggttttcaa
     9781 actgcggctg gaacatccaa atttcacgca tcgtggcgga aaagcgttgc ggtacgcccc
     9841 aaccgcgttc gacggtttcg cgcatcgtat tgattgcatc ggacagggcg ggcgtaggtt
     9901 tcaaaccctg ttgcagattg cttttccaat ggcggtccaa ctctggccac atcagggccg
     9961 ccagtacgaa accgaccgaa accgatttgt cggcacgcag ccgctcatcg gtatttttca
    10021 gggcaagcgc cgtcattttt ccggcgatgc cgtctgaaac gcgcaaagca ttgagcagcg
    10081 gatggatgtc cggtatgtca aatccgttca aacgtttcag acactcgcgc gcgtgccctg
    10141 aaaacagcag tttcatgatt tcgtcgaaca gccttgccac aggttcgtgc ttcagacggc
    10201 atatcgattc ggcaatcggt gcggcggttt cttccgacag ctcaaagccc aatttgcccg
    10261 acaggcggat ggcgcgcaaa atcctgacag ggtcttcctg atagcgttcg gcggcattac
    10321 caatcataac cagcctgcgg gcggcaacat cggcaatccc gttgtggaaa tccaaaatct
    10381 cttctttttc aggatcgtaa tacaaggcat tgcaggtaaa atcgcgccgc atcgcatctt
    10441 cttcgatgct gccgtaggtg ttgtccttca tgattctgcc gtgcgcgttc tgatgaacct
    10501 tcgcaccgcc gcgaaacgtc gttacttcga taatctccgc accgttcatc acatggacaa
    10561 tctgaaaacg cctgccgatg atgcggctgc ggcggaagag tttgtgcacc tgttcgggcg
    10621 tggcatcagt tgcgacatcg aaatctttgg gttcgatgcc gagcagcagg tctctgaccg
    10681 caccgccgac cacataagcc tgaaaccccg cccctttcag gcggcgtatg acgttttcgg
    10741 cggcaaagct caacatttcg gcactgatgt tgtgtctttc ggcaggaatg accgttttac
    10801 tttccgcttt tttactgctc cgaccggaag gcagcatctt attcaaccat tttttcagca
    10861 taaatattct gacccgaaga gcggcatctc cacgggcaac cgtgttcaga ctgcatcagg
    10921 cggtacgatt ccacaagatg ccgaaaacca taagcaaaag gcgtagaaac tacgccgtcc
    10981 gaatcacgcc gccctcgcgg cggcaacgcg tcattataac agattgcccc ttaaaaaatc
    11041 agaccctgct tttgtggcgg agtctgaaat ttgatgcacc ttatatattg cgtccctaag
    11101 aagggatgat taacaaaaat taacaccctt tactttcttt tccgattggg aacattcccg
    11161 tcgtacaaac aagcaaatga aggaacagaa atcacattca aacggcgttc cgccgcctct
    11221 acgccgcttc ccagtagtcg atataaagct gcaattcgag gttgtcgcgc cattcgttgg
    11281 caacggggcg gtacaccgtg cggatgtatt cgggaatgtc ttcgctgcaa cgccagaaca
    11341 tcgcttcaaa ttcgcagccg tctttttgca accacgcttt tttgtgtttg ccttccgcgc
    11401 ccaaaggctg ctggcgaacg acgtggaact cgtcggtaaa gctcggcggc gcaaagccct
    11461 gcccccaaac gtggcaggcg aggttttgcg cctgttccaa cgtgatgtcg caggcgggca
    11521 ggctgccgtc agtaatatag gtttgcgaca aatcgtcttc gcacaccatc tcacgcacgg
    11581 cttcttcaaa ggccgtctga aacgcgggaa tattgtgttc aagtatgctt aaacccgccg
    11641 ccatcgcgtg tccgccgaat ttcaaaatca aatcgggatg gcgtttggac accaagtcca
    11701 aagcatcgcg caagtgcaga ttgggaatgg agcgtcccga accgcgcact tcgccgttgt
    11761 ccgccggcgc aaacacgatg gtcggacggt aaaaacggtc tttgaggcgg ctggcaacaa
    11821 tgccgaccac gccttgatgg aagtcgtcgc gatacgccac caaagtcgtc tgacctgaag
    11881 gcagggtttc gggaaaggcg ttcaacgcgt ctcgcagcat agactgctcg atttcgcggc
    11941 gttcgatatt gaggttgttt aaccgagccg ccagttcctg cgcttcggaa tcatctcgcg
    12001 ccaacaggca ggcgatgccg accgacatat cgtccagccg tccggcggcg ttgatgcgcg
    12061 ggcccaacgc aaagcccata tcaaacggct gagccttgcg ccaatcgcgc cgcgccactt
    12121 caaacaaggc gcggatgccg gggcgcattt tgcccgaacg catccgtttc aaaccttgcg
    12181 acacgaggat gcggttgttg tggtcgaggg ggacgacatc ggcgacggta ccgagtgcga
    12241 ccaaatccaa aaggccgccc agattcggct ctttgatgcc gtctgaaaaa taattgcggc
    12301 ggcgcagttc ggcacgcaac gccgtcaaca cataaaaaat cacgcccacg cccgccaagc
    12361 ttttgcttgg aaaaccgcag cctttttggt tcggattgac gatgatgcag tcgggtacgg
    12421 tatcggctgg caaatggtgg tcggtaacga tgacatccaa acccagagcc tgcgcgcgcg
    12481 ccacgcctgc aatactggca atgccgttat ccaccgtaat cagcaaatcc acgccttgcg
    12541 cggcggcgat ttcggcgagt tcgggcgtta agccgtagcc gtgctcaaag cggttgggca
    12601 cgaggaaatc cactttcgcg cccatcgccg ccaaaccgtc caaaccgacg gcacacgcgg
    12661 tcgcgccgtc ggcatcatag tcggcgacaa tcaggatttt ttccttgcgt tcaaccgcat
    12721 ccgccaaacg gccggcggcg gcttcgcaat tcgtcagcga ttgataaggc aggagggaag
    12781 cgagtttgtc gtccaactcg gcaggacttt gcacaccgcg cgaggcacaa agccgggcga
    12841 ttaaaggatc ggcgccggcg gcgagcaaat gattgaaaac gtcggtattg acggggcggg
    12901 tttggatttt gactgacata gcgcggggtt ttacagtgcg ggtgtgcttg aaatgccgtc
    12961 tgaaggcttt tcagacggca ttgccgttca tttgtctgag gaattcgcgg ctgcaatcag
    13021 agccataggc aagaccagca ccgcggccgc cgcatccaat atcaacaagg ggggcgtata
    13081 ctaagatatt tccaaacagc ttggatttgt cggtatgttt ttcagtaacc gtataataaa
    13141 tatcggcggg cacactttgc tcaaaatgat aatcggcgtt cagtttttgc ggtgtggcgt
    13201 agtatttgcc tttggcggat acgcagcgcg tgtaaatggt ccgattgtcg agtttgaccg
    13261 ctttaaactc aagctgtttc agcttggcga tgtcgtcagg tctgccggta tcatagcgca
    13321 ggcaaagacc tccggtactg aaattctggc tgccgggcgc ttcgaatttg accggcaggg
    13381 cttggtggcg ggcatagctc ggggtatcct caactatttg gaagggcttg tccaacccgg
    13441 ccttcaaaag gcccgtcagc ttcgccgaat cttcgggatt gacggcgaac cagtatttcc
    13501 cgcccatcat caccaggctg cccttttcca attgggcatt gtcttcggca accacaccga
    13561 aggcgcggat ttggtctttg tcaacgtgtt tgcgggtgat tgtttggctg accgggttgt
    13621 tcatcccccg caacatcatc gtacagccgt tcagtatcaa ggttgccgcc aaaacggcgg
    13681 cggtcgtttt acggaacaac attttatctt ccaatctaaa taacggcgga tgccgtctga
    13741 aaatatgcct aaatttccgc gcccccgttt tccatcacgg ttttcaattc ttgaaacagg
    13801 gcgcggaagt ttttcggcgg tttgtcctgt tcctgttctt ttttggtgtt gcggacgagc
    13861 gtcctcagcc tgcccgcgcc ggcgtttgga aaatcggaca taaactgcgt cagcgcgccc
    13921 tcgtctgcca acaaccgtac acgcgcccgt tccacgcgtt gcaaaaaggc gttgtgcgcc
    13981 gcatcgtcgc cgcgcagctt ggcaaggaac gcctcgatgg gcgcgggatc ggtatcgcgc
    14041 atcagacgtc cgataaattg cgcctgacgt ttgagcgcgc cgttggacgt aattttttta
    14101 taggtaacga cggcctcgta caaatcttca tccaaaccga tttttttcag cgtgtcgttt
    14161 gagagcctgg tcagttccat acccaaatcc tgcaaaccgt tcatctgctt tttcatttgg
    14221 gttttgctga tccactcgtc ttcttgttca aacatcttga ttctcgaatt ttttccaata
    14281 gcgtatttta acagaatgcc gccgcgttca gacggctttt tgcaccgcac gccctgcaag
    14341 cggcacgctt ttgcccctgc cgcccgaaac ggttaaaatg ccgcaacgct ccaccaagaa
    14401 agattgttat gctgttcaac cacaccgctt ccgaactcct cgacctctgc cgccgcacgc
    14461 tcgacttggc aaaagcagcg ggcgcgaccg ccgccgaagc cgacttcagc gaatcgctcg
    14521 gacaaagcgt cagcgtgcgc ttgggcgaaa tcgaacaaat cgagttccag caggacaaat
    14581 cgctggacat taccgtttac gtcggcaaac gcaaaggccg cgccggcacc gccgacttct
    14641 ccgaacaagc cctgcgcgac accgtccgcg ccgccgccga catcgcccgc cacaccgccg
    14701 aagacggttg cgccggactt gccgaccccg agttgatggc gcaacacatc ggcgaccccg
    14761 acctttacca cgaatgggat ttggatacgg aagccgccgt cggcttggca aaacaatgcg
    14821 aacaggcagc gttggacacg gacagccgca tcgaaaactc cgaaggcgcg gcggtgcaaa
    14881 ccggacacta ccaatacgtt tacggcaaca cccacggttt tgccgcacac cggcaaagca
    14941 cgcaccacag catttcctgc agcgtcgttg ccgccgacga aaacggaatg cagcgcgact
    15001 actggtacga ttccgcctgc cgccatccgg atatggacag ccccgaaacc atcggtcaaa
    15061 ccgccgcccg ccgcactttg cgccgactcg gcagccgcag catcccgaca ggcagctacc
    15121 ccgtcctctt cgataccacc gtttcgggcg ggctgatcgg acacctcgtc ggcacactct
    15181 ccggcggcgc gctctaccgc caaagcagtt tcctgatcga cagcatcggc aaaaaagtcc
    15241 tgcccgattt cctcaacctg cgcgaagaac cgcacatccc ccgctctttc cgcagcagct
    15301 attttgatgc ggaaggtgtt gccaccgcgc cgcgcttcgt gattcaaaac ggcattgtcg
    15361 aaggctattt cctcggcagt tacagcgcgc gcaaactcgg aatgcagacc acgggcaacg
    15421 ccggcggcgc gcacaacctg tatttgaacc atacgcacga aacgcaatcc gacctgctga
    15481 aagaaatggg cacgggattg ctggtaaccg aattgatggg acagggtgcg aacaccatca
    15541 ccggcgacta ttcgcgcggc gcggcgggtt tttgggtgga aaacggcgtg attgcctacc
    15601 ccgtccacga gattaccgtt gccggacgct tgcaggatat gtaccgcgac atcgtcggcg
    15661 tggcggatga cgctttgcgg cgttcgtcca acaaaatcgg ttcgattctg attgcgggga
    15721 tgacggttgc cggaagctga acgccctgcc gatgccgtct gaagacgaag gcggcgcgtt
    15781 ttgccccgtg cctgcccgtt tgccgtttta tgccgcaccg ccttttaccg gcgacattgc
    15841 acattttttt catcagcact gattttccct tatccgtcaa aatactaagc cacttgccca
    15901 caacagggta cacacaagtt caggataagg cgggcgggga ttggggactt ttccgccatc
    15961 ggcaaaacgg cagacaaaaa cggcgggaca ttgcctgtcc cgccgttttc aaatatacat
    16021 ttgaccgtac atcaggaatt aagctgcctg aatgttggcg gcctgtttgc ctttagggcc
    16081 ggtggttacg tcgaaagaga cgcgttggcc ttctttcagg gttttgaaac cttccatatt
    16141 gatcgctgag aagtgtgcga acaaatcttc gccgccttcg tcaggagtga tgaaaccaaa
    16201 acctttagcg tcgttaaacc attttacgat accggttgcc attagaaact tcctatactt
    16261 aaaaattaac aaaatcagca aaataaggca tacagcaaac ttaaacgttc agcgtttcca
    16321 cccagcttta tatacttggt cgagtgccga cttttgctta accgtctttt tacatttgtt
    16381 aagacaaaac gtcaagctat gttttcaaaa aagtgggaaa ataggcgaaa gtaccgaaaa
    16441 tacaacaaaa atgccgtctg aacgcggctt tcaaatggga cacgctatga ccgcgcaaca
    16501 ccaatccgac acgcttttgc accgcctgaa caccctgccg ccgaaacgtt acggcgtatt
    16561 tttattgaac gacgattaca ccacgatgga atttgtcgtt gaaatcctga ccgaaatctt
    16621 tatgctcggg caggaacagg cggtagcggt aatgctctcg gttcatcacg aaggcaaagg
    16681 cctgtgcggc acttacacgc gcgatatcgc ccaaaccaaa cagcaacaag tcatgcagcg
    16741 ggcaaaagcc gaaggacatc cgctgcaatg tattgtcgag gagatttaat atgcttgccc
    16801 ctgaattgga acagattttg cagcagcttt accgcgaggc gcgtaaggct cattatgaat
    16861 ttatcagcct cgagcatctg cttttggtac tcatcgaaga agatgccgcc gtgccgaacg
    16921 tcttaaaact ctgcggtgcg gatttaaaag cggtgtccga acagctcgcc gccagcgttg
    16981 ccgaaaacac cccccctgat tcccgaccac cttttagaca cggtcgaaac ccggcccacg
    17041 ctcggcttcc aacgcgtcat ccagcgggcg atggtgcata cccaatcggc aggcaaaggc
    17101 ttggccgagc ctttggacgt tttggtcgcg ctgatgagcg aaaccgacag ccacgccgtc
    17161 tatttcctca agctgcaatc ggttacgcgt tttgaagttt tgcgctgtat tgcccacggc
    17221 tctcccgatg aagatgaaga cgatggcaac tatttttcag acggcatgga cgacgataat
    17281 gagaaccgca ccaaaccggg caaaaaccct ttatcggcgt acaccgtcaa cctcaacgcc
    17341 gaagtcaaag ccggccgtat cgatcctttg attggtcgca aacacgaaat ggaacggctg
    17401 gtgcaaatcc tgtgccgccg ccgcaaaaac aatccgcttt tggtcggcga agcaggcgtg
    17461 ggcaaaaccg cgctggcgga cggtttggca catcaaatcg tcaacgacga cattcccgac
    17521 gcgctcaaag aggccgaagt gtacgcgctg gatatgggtt cgcttttggc gggcacaaaa
    17581 taccgcggcg actttgaagc gcgggtcaaa tccgtcttga aacagctcga aaaaatcccg
    17641 cacgccattt tattcatcga cgaaatccac accatcatcg gcgcgggcag caccggcggc
    17701 ggcacaatgg acgcgtccaa cctgctcaaa cccgcattgg cgaaaggttc attgcgctgt
    17761 atcggcgcaa ccacttacga cgaataccgt actatttttg acaaagacca cgccctaagc
    17821 cgccgcttcc agaaaatcga cgtggtcgaa cccaccgttg ccgaaaccgt tcaaatcctg
    17881 cgcggcttga aaccgatgtt cgaagccttc caccaagtcc gctacacgca aggcgcactc
    17941 gaagccgccg ccgaactctc cgcccgctac atcaacgggc gcttcctgcc cgacaaagcc
    18001 atcgacgtaa tggacgaagc aggcgcggcg caacggattc tgcccaaatc caaacagaaa
    18061 aaagtcatcg gcaaagcgca aatcgaaacc gtcatcgcca aagtcgcgcg gattcccgaa
    18121 aagaccgtgt cgcacgacga caaacaagtg ttgcaattcc tcggccgcga tttgaacaat
    18181 atggtttacg ggcaggaaga cgccatcgac gcgctggttt ccgccgtcaa aatgtcgcgt
    18241 tcgggcttgg ggctgcccga caaaccgata ggcagcttcc tcttctccgg ccctaccggc
    18301 gtcggcaaaa ccgaagtcgc caaacagctt gcctactcaa tgggcgtacc gctgcaacgc
    18361 tttgatatgt ccgaatacat ggaacgccac gccgtatcgc gactcatcgg cgcgccaccg
    18421 ggctacgtcg gctttgaaca aggcggcctt ttgaccgaag ccgtcaacaa gcagcctcat
    18481 tgcgtgttgc tcttggacga aatcgaaaaa gcccatccag atattttcaa cgtcctcctg
    18541 caagtcatgg acgcaggcaa actgaccgat aacaacggta agagcgccga tttccgcaac
    18601 gtcatcctga tcatgaccac caacgcaggc gcagaaagcc tcagccgacc cagcctaggc
    18661 tttaccgcca aacgcgagcg cggcgacgaa atgcaggcaa tcaacaaact cttcacgccc
    18721 gagttccgca accgcttgga cgcgatcatc ccgtttgcac ctttgtccga acccatcatc
    18781 gtcaaagtcg tggacaaatt cctgctccag ctcgaacacc ggctcctcga caaaaaagtc
    18841 gaagccgaat tcacaccggc attgcgtaaa tacttggcag aaaaaggttt cgacccgcaa
    18901 atgggcgcgc gcccgatgca ccgcctgatt caggaaaaaa tccgcaaacc gctcgccgac
    18961 gaactcctgt tcggcaaact cgccgacggc ggctttgtgc ggatagactg ggatgcggcg
    19021 aaagaagaag ccgtattgaa gtttaagaaa agcaaggtca aaataaaaac cgcctccgca
    19081 taaaatcaaa aatgccgtct gaaaggttca gacggcattt tgtcaaatat cggcccctat
    19141 tccggcaaac ttctccacaa acgccgcgat tttttggaag acgctttgtt tcttcgtcag
    19201 atattgcggg ttgagcggac tcattttcgg cagggtttcg gtcagttccg tgccgttttc
    19261 gctggcatag ccgcgtttga gcgagccggt caaatagcgt ttggcggcgg tttcgttcag
    19321 accttcggcg gcaatcaatc ctgccgcttc gtgccgcatc acctcttgcg cgtaggtgta
    19381 aaaggtttcc agtatggcgg gaacgtcggg cactttatcc aaatccgtat cgttgatgaa
    19441 atccacaatc aggccctctt tggcgcggtg gccgatgctg gcgcggatga tgcggcggat
    19501 ttcttccacc agctccgctt tgcctttgat ttttttgtga tgctcgaaaa ccagttgcag
    19561 gatgtaatcc agattgattt cctgcgattt gagcaaatcc acctcaaaaa ccacatcgtc
    19621 ccagtcgatt tttgactgtt ctttctgttc gcctgctttt tggcggcgca gccagtctcg
    19681 gatgtcgtta taggcggaac ggtagtcctg caccgccctt tcagacggca tcggcacttt
    19741 ccgcatttcc tgcacgtctt cgtcgctcag gtagtatttt tcctgaaacg ccttcatcgc
    19801 atcttcgtcc gccgcgtcca cattctgcaa ttcgcgcagc gcggcaaatt catcgtagtt
    19861 ctgcaatacg ttttccgccc gcaggtattc gccgaagagt ttggcaaaat cttttttgtc
    19921 tttttccgtt tcgattttgt cgggatcggg gaaacgctcg tgcaattctt ttgctacatc
    19981 cagataaccg cgccgtgctt cgccggtctg gctgtcggta tagccgttca tgtattcttc
    20041 gtagcttttt tccagcacta tatttttggt gtttttgtcg ccgaagagcg tgatcgcatc
    20101 aatggttgcc tgctccaagt cgcggaagca gacaatgttg ccgaaggttt tggtagcatc
    20161 gtaaatgcgg ttggtgcgag aaaacgcctg catcaggccg tgatagcgca ggtttttatc
    20221 gacgaacagc gtattcagcg tcggtgcgtc aaaacccgtc aaaaacatgc cgaccacaat
    20281 cagcaagtcc acttcccggt ttttcacccg ttttgccaaa tcgcggtagt agttctgaaa
    20341 ggctttgctg tccgtgccga aattggtttt gaaacaggcg ttgtaatcgt tgatggcagc
    20401 ctgcaaaaat tctttcgcgc tgctgtccat cgcttccggt tcaaaggtct cgtcaacaat
    20461 ttcaccgacg gcgttttgct cttcgttggc ggcaaaggaa aaaatggtgg ctgttttcaa
    20521 cgggtgcagg ctgcctgcct gttgtgtttt gaacgcttcg taatagcact tcgccgcatc
    20581 cacgctgctg acggcaaaca tggcgttgaa gcctttgccg cccgcattca agcggtgcgt
    20641 tttctgcctg aaccggctca ggatatattg cgtgatttcg cggatgcgtt cggggtgcag
    20701 cagggcttgg cggttttcgg cggcactcag ttccttctcg tcctgttccg cttccacggc
    20761 tttgaactgc gggcgcacat cgttgtaatc cactttgaat ttcaatactt tttcatcgcg
    20821 gatggcatcg gtaatcacat aagaatgcag ctcccgcccg aacacgcccg ccgtggtttc
    20881 cgcgcccaaa gcgttttcgg gaaaaatcgg cgtgccggta aagccgaact ggcagaattt
    20941 tttaaatttc tttttcaggt ttttttgcgc ttcgccgaat tgcgagcggt ggcattcgtc
    21001 gaaaataaat acaacctgcc ggtgataaac cggcagatta tcttcacttt tcatcaggtt
    21061 gttcagcttt tggatggtgg taacgatgat tttgttgccg tctttttcca aattgcgttt
    21121 caagcccgcc gtactttccg agccgtttac gctgtcgggc gaaaaacgtt ggtattcctt
    21181 catcgtctga tagtccaaat ccttcctgtc caccacgaag aaaaccttgt cgataaacgc
    21241 cgattccgtc gccagacgcg ccgccttaaa gccggtcagc gttttgccgc tgcccgtggt
    21301 atgccaaaca tagccgccgc tttccggccc gctccaattc ttcgcctgcg ccgagctgtt
    21361 gattttccac aaaatgcgtt cggcggcggc aatctggtac ggccgcataa tcagcagcgt
    21421 atcattcgca tcgaacacgc tgtaatgcag caaaacgctc agcaatacgc ttttctgcag
    21481 gaacgtggcg gtaaagtctt tcaaatcctt aatcggatga ttgtccgacc gcgcccaatt
    21541 catcgtgaaa tcgaagctgt ttttgtcgcg cttggtggtg ttggcgaaat aacgcgtgtc
    21601 cgtgccgttg gaaatcacga agatttgcag gaatttgaac agcgaatttt cgctgttgaa
    21661 gctctctttg ctgtaacggt gcacctgatt gaatgcctcg cgcaccacca cgccgcgctt
    21721 tttcaattca atctgcacca gcggcaggcc gtttaccaac acggtaacgt cataacggtt
    21781 tgcatgcgtg cccgtctgct caaactggtt gataagctgc acatggttgc gggcaaggtt
    21841 tttcttgtcc agcagataaa tgtttttcag acggccgtca tcaaaagcga aatcgtaaat
    21901 atggtcgtcg tggattttgc gggttttatc ggtaatgttt tcagccggcc tgtccagata
    21961 ttccgtcaaa aaccgcgccc attcgccgtc tgaaaacgcc acatcgttca gccgctgcaa
    22021 ctgcgcgcgc aggttttcca gaagcctgct ttggctgttc aaatccttgc ggtattcgta
    22081 cccctgattc tgcaaatcgg cgattaactc cgcttccaac cggttttccg attggtagct
    22141 gcccgactgt tcgatttttt catattggtc gagcacgatg aaattcggcg tttcggcgat
    22201 gggtttggtt tcgaggttca tgggtcgtcc tttgcggtgt cgggttttat agtgaattaa
    22261 caaaaaccgg tactgcgttg gctcgcctta gctcaaagag aacgattccc taaggcgccc
    22321 aagcaccaag tgaatcggtt ccgtactatt tgtactgtct gcggctcgcc gccttgtcct
    22381 gatttttgtt aattcactat aaacggtttg atgttcggat tgggctgcct gaaaaagtgc
    22441 aggctgcttt ttcaagcagc cttggggaag gcaagcagct gttcgcggta atattcgtat
    22501 tgtttgcggc gcagggcgat ttcgtgcggc aggccttcgc tgacggagtg ggtcagggta
    22561 tcgaatttgc ctaggatggc gacgattttt tcctgttcgg ggagcggggg gatggggatt
    22621 ttatattgca taatcgctgc tttgctgcca cgcggcattt ttgcaccttt ggcgtgcttc
    22681 atattaaaag caaaaaattt atcatcggcc aatacctgat acagatattt tggattaacc
    22741 ttttcatctg ttacccggat aaccaaaaca tcaccgtttg ttccgcccgt gcagtctgcc
    22801 tgccagattt ttttcaaata cggacggata tttccaatca aaatgtcatt gacaatatat
    22861 tctgtcattt ttccttcgct tggaacataa ccggataact ttttaccttc tctgttttgt
    22921 aagagattat ccacgccaac gtaattatgt tcgttcagtt tatccgaaca aatacggttt
    22981 tttgaatatt cggcaacctc ccccaacgtc ttccaaacca catttttcag acggcattga
    23041 tagccatcag ctatcccccc gatttgattg tcaaaatcta aaagtaagtc gcggtaatac
    23101 cggtattggc gtttgcgcag ggctaattcc gcttccagcg tagcttccag cgtagcttcc
    23161 agctcggtga atttgtcaag tatttttaca attttttgtt gggtttccaa tgatgggatg
    23221 gggattttat agttatctgt atctggtgtt gctatttgtg gcatttgcat ttttgatccg
    23281 atattacgaa aatag
//
LOCUS       DAWXHA010000015        22983 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.015, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000015 DAWXHA010000000
VERSION     DAWXHA010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22983
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.015"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            156..2400
                     /locus_tag="AABD07_000499"
                     /pseudo
     CDS             156..2400
                     /locus_tag="AABD07_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685727.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            2525..4075
                     /locus_tag="AABD07_000500"
     CDS             2525..4075
                     /locus_tag="AABD07_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HFB2355089.1"
                     /translation="MKKPLISVAAVLLGVALGTPYYLGVKAEESLTQQQKILQKTGFL
                     TVESHQYDRGWFTSTETTVIRLKPELLHNAQKYLPDNLKIVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQVPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGETVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGAFIDSEGRFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGDASGLFTHDPVLNIKIFRFTLPQGKIDVGGKIMFK
                     GMKKEDLNQLGLMLKKTEANIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEARASIAD
                     INETLRLMVDSTVQSMAREKYLTLDGNQIDTVISLKNNALKLNGKTLQNEPDPDFDEG
                     DMVSGQPH"
     gene            complement(4499..6283)
                     /gene="lpdA"
                     /locus_tag="AABD07_000501"
     CDS             complement(4499..6283)
                     /gene="lpdA"
                     /locus_tag="AABD07_000501"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFB2355090.1"
                     /translation="MALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVIKEVKVKVGDKISEGGLIVVVEAEGAAAAPKAEAAAAPAQEAPKAAA
                     PAPQAAQFGGAADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG
                     CIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKS
                     RKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF
                     IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG
                     ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVA
                     AGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEG
                     HVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASGR
                     AIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHP
                     HPTLGESIGMAAEVALGVCTDLPPQKKK"
     gene            complement(6301..6735)
                     /locus_tag="AABD07_000502"
     CDS             complement(6301..6735)
                     /locus_tag="AABD07_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355091.1"
                     /translation="MSYLYRGISCQQDEQNNGQLKPKGNKAEVAIRYDGKFKYDGKAT
                     HGPSVKNAVYAHQIETDLYDGCYISTTTDKEIAKKFATSSGIENGYIYVLNRDLFGQY
                     SIFEYEVEHPENPDEKEVTIRAEDCGCIPEEVIIAKELIEIN"
     gene            complement(6836..8398)
                     /gene="aceF"
                     /locus_tag="AABD07_000503"
     CDS             complement(6836..8398)
                     /gene="aceF"
                     /locus_tag="AABD07_000503"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HFB2355092.1"
                     /translation="MSIVEIKVPDIGGHESVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAAEAQPAPAAAGG
                     ATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAV
                     FLKVGDKVSEGSAIIEVETAGSAAAAPAPAAQAAAPAAVPTSASPAAAKIDEAAFAKA
                     HAGPSARKLARELGVDLGQVKGSGLKGRIMGDDIKAFVKSVMQGGAAKPAAAGASLGG
                     GLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEADMTELEEF
                     RKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFNIGFAADT
                     PNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACFTISSLGGIGGTG
                     FTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAGMRFTVFL
                     ANLLKDFRRITL"
     gene            complement(8548..11211)
                     /gene="aceE"
                     /locus_tag="AABD07_000504"
     CDS             complement(8548..11211)
                     /gene="aceE"
                     /locus_tag="AABD07_000504"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HFB2355093.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLLKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSDFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAIETERFNRLHPLEAEKVPFVTSQLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            11908..13620
                     /locus_tag="AABD07_000505"
     CDS             11908..13620
                     /locus_tag="AABD07_000505"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HFB2355094.1"
                     /translation="MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHER
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQATYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGELVLLLLRGDHEFNDIKAEKLAGVKSPLTMASPAAIVEQFGANGG
                     SLGPVGFTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTA
                     SLNA"
     gene            13683..14339
                     /locus_tag="AABD07_000506"
     CDS             13683..14339
                     /locus_tag="AABD07_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HFB2355095.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHVEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLIGRDSDGTGEGEDILGCVAGYGVGLDLTA
                     RDIQCRLKAQGLPWLKAKGFRHSACVSDFAAADRIGNQDKVLFSLKQNGVLKQRGETG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVCASFTIGC
                     "
     gene            complement(14349..14804)
                     /gene="ruvX"
                     /locus_tag="AABD07_000507"
     CDS             complement(14349..14804)
                     /gene="ruvX"
                     /locus_tag="AABD07_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HFB2355096.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLATVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHADGTEHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVLGKKRKSVLDQVAAQAILHGFLEGGPAECFNGREG"
     gene            complement(14797..15345)
                     /locus_tag="AABD07_000508"
     CDS             complement(14797..15345)
                     /locus_tag="AABD07_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HFB2355097.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDGIALTS
                     SRDVLENISREGAVDKALISIGYSSWSKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(15347..15908)
                     /locus_tag="AABD07_000509"
                     /pseudo
     CDS             complement(15347..15908)
                     /locus_tag="AABD07_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710122.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
     gene            16234..18036
                     /locus_tag="AABD07_000510"
     CDS             16234..18036
                     /locus_tag="AABD07_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFB2355098.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQAKNKKEQPE
                     AAEGKKEKGKNAAVKDKKTGGKEAAKEFKKTAKNRKEAEKEATSRQSARKGREGDKES
                     KAEHKKAHGKPVSGSKEKNAKTQPENKQGKKGAKGQGNPRKGGKAEKDTVSANKKARS
                     DKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVSNSL
                     KQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAATKA
                     QISRFVSGNYKNSRPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQKAL
                     AVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLEQKG
                     TEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEKEAAQQKAEARRAE
                     MSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVF
                     YSTAPATVESIAPGTVSYADELDGYGKVVVIDHGENYISIYAGLSEISAGKGYTVAAG
                     SKIGTSGSLPDGEEGLYLQIRYQGQVLNPSGWIR"
     gene            18163..19638
                     /locus_tag="AABD07_000511"
     CDS             18163..19638
                     /locus_tag="AABD07_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HFB2355099.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDGRDNEVLPVQ
                     SIRTMAEVYGQIKANYYHDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAEVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDGMVLKAVPEDYVYGMGGDPLAGIPAELKTIPMAVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERT
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAAKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKK"
     gene            19968..21995
                     /gene="uvrB"
                     /locus_tag="AABD07_000512"
     CDS             19968..21995
                     /gene="uvrB"
                     /locus_tag="AABD07_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HFB2355100.1"
                     /translation="MEVIRYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQTIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAVDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRNIKENLLFGAE"
     gene            complement(22173..22931)
                     /locus_tag="AABD07_000513"
     CDS             complement(22173..22931)
                     /locus_tag="AABD07_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase family protein"
                     /protein_id="HFB2355101.1"
                     /translation="MPRFPRTLPRLTAVLLLACTAFSAAAHGNHTHWGYTGHDSPESW
                     GNLSEEFRLCSTGKNQSPVNITETVSGKLPAIKVNYKPSMVDVENNGHTIQVNYPEGG
                     NTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVLYEAGKTN
                     GRLSSIWNVMPMTAGKVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKT
                     YDHIDQAQAEKFTRAVGSENNRPVQPLNARVVIE"
BASE COUNT         5707 a         5757 c         6191 g         5328 t
ORIGIN      
        1 caaaaataaa ccaatattta acagtcggat agctccgcct gattaagttt ttcggtaata
       61 gttgtgatta tcaaatataa ttgccgcccg aaatatccga taagtttgtt tgttttatct
      121 ttaattcccc aatacttaaa aaagagagcg ttttcatgaa caaaaaactt gccttaatgc
      181 cgctgttgat tttgagcgcg ttttcatctg ccgccgacaa tactccgcag catggcgaac
      241 tcggacaggt tcatgtccgc gccgatgcca agcgcgtcaa agccgcgcat tcttactcca
      301 tcgccagcga tggcgacttg cgcgaccgcg taaatttggg cgtattgggt aaagccaacg
      361 cgtttaccgc gccgattacc gtcgtcaact acgacgaaca agccttcaac aataccgagg
      421 cgcgtacttt agtggatgcc gtagccaaaa aagacgcttc cgtttgagag tttggcggcg
      481 aaagcaacac gctgaccggt ctgtatttcc gtggttatca gcttgatgcg cgccaattca
      541 gcgtaaacgg cttggcagga atgtatggca cgcaaggcac ggcgagcgtg caagtcggct
      601 tcgcacaact gattaaaggc gcgtccaccg ccgtaaacgg cataccctga aggcgcggta
      661 tccggttccg tcaacatcga aaccaaaaaa gccgccgacg aaggcaaccg caaaatcggt
      721 ttggcccggt tcggcaacaa ccgcgcccaa ggtacgttcg acttagggca acgcttcggc
      781 gaaaacaaag cattcggcgt gcgtgccaac ggcaaactgc gccacggcga caccccgcgc
      841 cacggttaca gagaagacaa caaagaattt gccttaaatg ccgattatcg cggcgaaaaa
      901 ctgcgcgtga cgttcgactc catctacgcg aaacgcaaaa tcaacggcgg ccgcgcgcgt
      961 atgaaggata tccaaaacgc cggcggacgc ttgttcgacg cgcccgacgg caaaatcaac
     1021 ctgctgcctt cttggaactg gcaaaatacc gtcggcgaaa ccaatatgct gacgtttgaa
     1081 tgggatgcgt ttgacaatac ctaaattacc ggcggtatcg gctacaacaa agcgcgttat
     1141 tacggtacgc tgatttcccc aaccgtttgc ggtacaagcg gtgcgagcag ccaaaccaaa
     1201 acctgcatgg ctgccaacca ataccacacc ggcacggcgc gcctgaccga ccaatatttc
     1261 cgtactttga gtatgaacct gaccgcacgc ggcgaatttg aaaccggccc ggtcacgcat
     1321 aactggagta cggctttcga ccgcgttatc cgccagcgga aaaccataaa cggcagcggg
     1381 aacggcaaca gcaagataga agtgaaggca aacgaaaata ttgcgaatca attggcatcg
     1441 ttcaaagccg actatcccaa ttcttgggcg aactcggcca acttggatgc caatatcaaa
     1501 gtcaacagct tggctttgtc cgatactttg ggattcgttg ataacaaata ccctctgact
     1561 ttgggcggac gtttccaagc ggttgaatac actgataaga agaaatcaca gagcggcgat
     1621 gccaaacgtt tcagcccgat gctgatggcg gcgtgggtgc cgcaacctga tttggtcgtg
     1681 tgcggcaact atatggaaga cttggagcgt gccgatatca aaaccgatga ttccggcgaa
     1741 acgacaatgg cgaagccgcg cgtcagccgc cagtttgaaa tcggcgtgcg taaaaactgg
     1801 ggcgattttg taaccacgtt gaacgcgttc caaatcaaac gcccgggcta ctggcgcggc
     1861 aataccaaaa aaggtactga ttttgcagca tataaagcag caggaggcgc agccggcgac
     1921 gagcaaggta tggaacgcaa tcgcggtatt gagttcaatg cctatgccaa cctgttgaac
     1981 aaaaccctgc gcccgacttt cggcgtgatg tatctgcaat cgtccgtgaa gaattatccg
     2041 aatgcgcgcg atatgctggt taacggcgta caagtcgcca acccgcgcgt gattgtcaaa
     2101 acaggcgttg aacgggatac accgtttgcc aaaggtttga gcttgaacgg caatgtttcg
     2161 tatttcggca agtcttatca agacacgcaa aaacaatacg ccttcccgtc ctataccttg
     2221 gttgacgtag gcgcgcgcta caaaaccaag ctgggcaaaa acaccctgac cgtcagcagc
     2281 tcggtagaaa acctgttcaa caaaaactac tggcaggtac agcgcggaca atttgaccgt
     2341 agtttcgccg tcgtcggtct gccgcgtact tactggctga aggcggaatt ggatttctaa
     2401 gctgcctccg tttccgaaaa tgccgtccga acaggtttca gacggcattt cttttaaaga
     2461 aatatggcgg gatatgctta aataatgcta ttctagtacc tttgaaacct gcttgtttga
     2521 agtgatgaaa aaacctttga tttcagttgc ggcagtattg ctcggcgttg ctttgggtac
     2581 accttattat ttgggtgtca aagcagaaga aagtctgacg cagcagcaaa aaatattgca
     2641 gaaaacgggc tttttgaccg tcgaatcgca ccagtatgat cgaggctggt ttacctctac
     2701 ggaaacgacg gtcatccgtc tgaaacccga gttgctgcat aatgcgcaga aatacctgcc
     2761 ggataacttg aaaatagtgt tggaacagcc ggttacgctg gtaaaccata tcacgcacgg
     2821 ccctttcgcc ggcggattcg gcacgcaggc gcacattgaa accgagttca aatacgcgcc
     2881 tgaaacggaa aaagttttgg aacgcttttt tgggaaacaa gttccggttt cccttgccaa
     2941 taccgtttat ttcaacggca gcggtaaaat ggaagtcagt gttcccgctt tcgattatga
     3001 agaactgtcg ggcatcaggc tgcactggga aggcctgacg ggggaaacgg tttatcaaaa
     3061 aggtttcaaa agctaccgca acagctatga tgcgcccttg ttcaaaatca agctggcaga
     3121 caaaggcgat gccgcgtttg aaaaagcgca tttcgattcg gaaacttcag acggcatcaa
     3181 tccgcttgct ttgggcagca gcaatctgac tttggaaaaa ttttcgctcg aatggaaaga
     3241 gggtgtcgat tacaacgtca aattgaacga actggtcaac ctcgttaccg atttgcagat
     3301 cggcgcgttt atcaatccca acggcagcat cgcaccttcc aaaatcgaag tcggcaagct
     3361 ggctttttca accaagaccg gggaatcggg cgcgtttatc gacagcgaag ggcggttccg
     3421 tttcgatacg ttggtgtacg gcgatgaaaa atacggcccg ctggacatcc atatcgctgc
     3481 cgaacacctc gatgcttctg ccttaaccgt attgaaacgc aagtttgcac aaatttctgc
     3541 caaaaaaatg actgaggaac aaatccgcaa tgatttgatt gcggcagtca aaggcgatgc
     3601 ttccggatta tttacccatg acccggtact aaatatcaaa attttccgtt tcaccctgcc
     3661 tcagggaaaa attgatgtgg gcggaaaaat catgtttaaa ggcatgaaga aggaagattt
     3721 gaaccaattg ggactgatgt taaagaaaac cgaggcaaac atcagaatga gtattcctca
     3781 aaaaatgttg gaagatttgg cggtaagtca ggctggaaat attttcagtg taaatgccga
     3841 agatgaggcg gaagccagag caagcattgc cgatattaat gaaacattgc gcctgatggt
     3901 ggacagtacg gtccaaagta tggcaaggga aaaatatctt actttagacg gtaatcagat
     3961 tgatacggtc atttccctta aaaacaacgc cctgaagtta aacgggaaaa cgctgcaaaa
     4021 tgaacccgat cctgattttg acgagggaga tatggtttcc ggccagccgc attaatgccg
     4081 tttatgccaa atgccgtctg aaatgttcag acggcatttt tgtcggtctc gaaataggat
     4141 ggattttcat gtttcaaaaa caattgattg tctctaatcc gatatcagga cacgcttcca
     4201 atgtttagat atggaattcg gacgggatag gggaactatt gaaatccagt tgaaatctgt
     4261 tattggaaag catggaggaa aaataaaagg ctgtatttta atatagtatt gataggcatg
     4321 cttagcttca aggtattcaa tagtgtaggt gtctgcctaa ctggaaaata atcgtctttt
     4381 cccttgcaac cagttaaaat tgacagatgg ttaaaacaca gccaaataaa aatgccgcct
     4441 gaagggttca gacggcattt gttcggataa accttatcgg ctgcttagag catcaggttt
     4501 attttttctt ttgaggaggc aggtcggtac atacacccaa agccacttcc gcagccatac
     4561 cgatggattc gcccaaggtc gggtgcgggt ggatggtttt gccgatgtct gccgcgtcgc
     4621 agcccatttc gatggcaagg cagacttcgc cgatcatgtc gccaccgttc ggaccgacaa
     4681 tgccgccgcc gatgatgcgg ccggtttcgg catcgaaaat cagcttggta aagccgttgt
     4741 cgcaaccgtt ggcaatcgca cgaccggaag ccgcccatgg gaagttggct ttggtgattt
     4801 tgcggcctga tgctttggca gacaattcgg tttcaccgac ccatgccact tcgggggaag
     4861 tgtaggcaac gccgggaata acgcgtgcgt cgaagtaggc tttgtggccg gcacagtttt
     4921 cagcggcaac gtggccttcg tgaacggctt tgtgtgccaa catcggttga ccgacgatat
     4981 cgccgatagc gtagatgtgc ggtacgttgg tgcgcatttg tttgtcaact tcgatgaagc
     5041 cacgatcggt aacggcaaca ccggcttttt ctgcgctgat gagtttgccg ttaggcgcac
     5101 ggcctgccgc gaccagtacg gcatcgtaac gttgcggctc tttaggtgca tttgcacctt
     5161 caaaggtaac gtaaacgccg tcttctttcg gctcgactgc aacggttttg gtgttgacca
     5221 taatgttgtc aaaacggtat tcgttttgtt tttgccatac tttaaccaag tcgcggtctg
     5281 cgccttgcat caggccgtcc atcatttcaa ccacatccag gcgagaaccc agcgtgctgt
     5341 aaaccgtacc catctcgagg ccgataatgc cgccgccgat aatcagcagt ttgcccggta
     5401 cttctttcag tgccagtgcg ccgctggaat cgatgatgcg cggatcttca ggaatgaaag
     5461 gcagtttggt tacgcggctg cctgctgcaa tgatacagtt tttgaaggca acgatttttt
     5521 tctcgccggt aggggctgcc tgttcgtacg cgtcgccggc agtcagcgac acttccaagt
     5581 ggtgaggatc caagaattgc ccgtcgcctt ggataacgtc cactttacgg cttttcgcca
     5641 tacctgccaa accacccgtg aggcgggaaa ccacgccgtc tttgtaggcg cgaagcatat
     5701 cgatgtcgag ttccggttcg gggtatttga taccgttggc agccaagtgg cgcacttcgt
     5761 cgataacggc ggcattgtgc aacaaggctt tggaagggat acagccgacg ttcaggcaaa
     5821 cgccgcccaa agttttgtaa cgctcgacga tggcgacttt caagccttca tcggcagcgg
     5881 caaatgcagc ggagtaaccg ccgggaccgc cgcccaatac gaccacgtcg tactcggcat
     5941 cggcagcacc gccgaattgc gcggcttgcg gagcaggagc ggcagctttg ggtgcttctt
     6001 gcgccggggc ggcagccgct tcggctttag gggcggcagc cgcaccttcg gcttcgacga
     6061 cgacaatcaa accgccttcg gagattttgt cgccgacttt gactttcact tctttgatca
     6121 cgcccgcaac ttcggcaggc acgtccatcg tcgctttgtc ggtttccaag gtaatcaggg
     6181 tgtcgtcaac ggcgatggtg tcgccaacgt tcacttcaac cgcgataata tctacatttt
     6241 cgtgtccgcc aatgtcgggc actttcaatt caactaaagc cattatattg acctttcaac
     6301 ttagttaatt tctatcaact ctttagcaat aatcacttct tcaggaatac agccacaatc
     6361 ttcagctctg attgttactt ccttctcatc tgggttttct ggatgttcaa cctcatattc
     6421 aaaaatagaa tattgaccaa acaaatctct atttaaaaca tatatatagc cattttcgat
     6481 gccggagctt gttgcaaatt tcttggcaat ttccttgtct gttgtcgtag atatataaca
     6541 tccgtcatat agatctgttt caatttgatg ggcgtaaact gcattcttca cacttggacc
     6601 atgtgtagct ttaccatcat atttaaactt accatcataa cgaattgcaa cttcagcttt
     6661 attaccttta ggttttaact gtccattatt ttgctcatct tgttggcaac taatgcctct
     6721 atataaataa gaaatttccc ataagttatt aatttaaagt ttgaatttaa caccatcact
     6781 catcaatctc aagcaatcca aacattatca gactgcttga gagggatgtt ttattttata
     6841 aggtaatgcg gcggaagtct ttcaacaggt tcgccaggaa tacggtgaag cgcataccgg
     6901 cggcaccgtc gatgacgcgg tggtcgaagg acaggctcaa cgggcacatc aggcgcgggg
     6961 caaactcttt gccgttccaa accggtttga tttgggattt gcacacgccc aagatagcga
     7021 cttcgggagc gttcacaatc ggcgtgaaac ctgtgccgcc gatgccgccc aagctggaaa
     7081 tggtaaagca cgcgccttgc atttcttgcg gtttgagctt gccttcgcgg gcttttttgg
     7141 acaattcggt caattcttgg ctgatttgtt tcaagccttt ttgatccacg tctttgatga
     7201 cgggaacaac caagccgttc ggcgtatcgg ctgcgaaacc gatgttgaag tagtttttca
     7261 gcaccaggtt gtcgccgtcc aaagaagcgt tgaattcggg gaaggctttc agcgcggaaa
     7321 cggaggcttt gatgatgaac gccaacgggg acagtttcac gccttcgcgt tcccattctt
     7381 tgttcagctg tttgcggaat tcttccagct cggtcatatc cgcttcttcg tgtacggtaa
     7441 cgtgcggaat caccacccag ttgcgggaca ggttttgacc ggagattttc ttaatgcggg
     7501 acaattcttt aacttcgaca ttgccgaatt tggagaagtc cactttaggc cacggcagca
     7561 agtccagacc gccgcccaaa gatgcgccgg ctgcggcagg ttttgccgcg ccgccctgca
     7621 ttacggattt cacaaaggct ttgatgtcgt ctcccatgat acggcctttc aagccgctac
     7681 ctttgacttg gcccaaatcc acgcccaatt cgcgcgccag tttgcgtgcg gaaggaccgg
     7741 cgtgtgcttt ggcgaaagcg gcttcatcga ttttggcagc ggcaggcgag gcagatgtag
     7801 gcacggcggc gggtgcggca gcttgagcgg caggcgcagg agctgctgcg gcagagccgg
     7861 cggtttccac ttcgataatg gcagagcctt cggacacttt gtcgccgact tttaagaata
     7921 cggctttaac gacaccggca gcggtacaag gtacgtccat tgtcgcttta tcggtttcca
     7981 aagtaatcag cgtgtcgtct tcggcaacgg tgtcgccaac tttgatttca acggcgatta
     8041 catctacatc ggtatggccg ccgatatcgg gaacggctac ttgaacggtt gcaccgcctg
     8101 cggcagcggg tgcaggttgt gcttcggcgg cagcagccgg ggcggcttcg gcagcggcgg
     8161 caccggtttc aacggtcaaa attacgccgc cttcggagat tttgtcgccg actttgactt
     8221 ttacttcttt cacgacaccg gccgcatcgg caggcacatc catcgtggct ttgtcggttt
     8281 ccagtgtaat cagggtgtcg tcaacggcga tggtgtcgcc cgctttaact tctacggcga
     8341 tgatgtcgac gctttcgtga ccgccgatat cggggacttt gatttctacg atactcattt
     8401 gagttccttt aatctttttc agttggatgc cgtctgaaag ctgcttcagg cggcatcggt
     8461 acggtttgtc tgttcaaacc attcgggcat tcggttttca gacggcctga tgttggcatg
     8521 aaacaaacag gccgtctgaa acatcaatca gcgtttccag ctaggggctg aatcggcttt
     8581 gatgccgtat ttctcaatgg cttgttgaac ggtttctttg ctgactttgc cttgttccgc
     8641 caatgcggcc aatgctgcca cggcaacgtt gtagcggtcc acttcaaaga agcggcgcag
     8701 gttggcgcgg ctgtcggaac ggccgaaacc gtcagtgccc aagacatggt agtcgttcgg
     8761 gatgtacgcg cggatacggt cggcatagct gcggatatag tcggtagcgg cgataaccgg
     8821 accgtcatga ccttgcagtt gggaagtaac gaaaggcact ttttcagctt ccagcggatg
     8881 caggcggttg aagcgttcgg tttcgatggc gtcgcggtgc agcaggttga aggacgggca
     8941 agaccagatg tctgcttcca cgccgaagtc ggctttcagc agctcggcac cggcaatcac
     9001 ttcttgcaga atcgtaccgg aacccatcaa ttggactttc ttgtcgcctt tgccgccggc
     9061 tttcagcagg tacatacctt tgaggatgtc ttgttccgca ccttccggca tatcgggatg
     9121 ggtgtagttc tcgttcatca gggtgatgta gtagaacacg tcttcattat tggcatacat
     9181 acggcgcaga ccgtcttgta cgatgacggc cacttcgtat tggaaggtcg ggtcataaga
     9241 tacgcagttc ggaatcaggt cggcctggat gtggctgtgg ccgtcttcgt gttgcagacc
     9301 ttcgccgttc agcgtcgtac ggccggcagt accgcccagc aggaagccgc gcgcgtgcat
     9361 atcgcccgcc gcccaagcca agtcgccgat acgttggaaa ccgaacatgg agtagtagat
     9421 gtagaacgga atcatcgcga agtcgctgtt ggcgtagctg gtcgcagccg caatccagtc
     9481 ggccatcgcg cccggttcgt taataccttc ttgcaagatt tgaccgtcga cggattcttt
     9541 gtagaacatc agttggtctt tatcttgagg cgtgtattgt tggcctttgg gattccaaat
     9601 accgtattgg cggaacatac cttccatgcc gaaagtacgg ctttcgtcgg gaacgatagg
     9661 tacgacgcgt ttgccgattt ttttgtcttt cagcaaagtg gacaggatgc ggacgaatgc
     9721 catcgtggtc gagaactcgc gttcaccgct ggatttgagt tgtgcgtcga atgccgacag
     9781 ctcgggcact tccaatactt cctgcgtcgg tttgcgttgc ggcaggtagc cgcccaaagc
     9841 atcgcggcgt gcgtgcaggt atttgtattc ttccgtatcg ggggcaaaag tcaggtaagg
     9901 cagatcgccg ctttcgattt gttcgtcggt aaccggaatg tcaaagcggt cgcggaattg
     9961 tttcagggac gctttgtcca tttttttggc ttggtgggca acgttctgac cttcgccgga
    10021 tgcgcccata ccgtaacctt taatggtttt cgccaagata acggtaggtt tgccgtcggc
    10081 atggttcgct gcgcggtcgt aggcgttgta cactttttga ggatcgtggc cgccgcggtt
    10141 caatgcccag agttgctcat cggtcatatc ggcaaccaat gctttcagtt cgggcgtatt
    10201 gaagaagtgt tcgcgcacat acgcgccgtc tttggatttg taagtttggt agtcgccgtc
    10261 caaacattct tccatacgtt ggcgcaggat accgtctttg tctttcgcca agaggcggtc
    10321 ccaacggcgg ccccaaatga ctttgacgac attccagccg gcaccggcaa agttgccttc
    10381 caattcttgg atgattttgc cgttgccgcg caccggaccg tccaagcgtt gcaggttgca
    10441 gttgatgacg aaaatcaggt tgtccaagcc ttcgcgtgca gccagcgcga ttgcaccttg
    10501 ggattcgggt tcgtccattt cgccgtcgcc gcagaaacac catactttac ggcctttggt
    10561 ttttgccaag ccgcgtgatt ccaagtattt caggaaacgc gcctgataaa tcgccatgat
    10621 ggggcccaag cccatggata cggtcgggaa ctgccagaag tcgggcaaga ggtgggggtg
    10681 tggataggaa ggcagaccgt gtccgtccac ttcttggcgg aagttgttca gctggtcttc
    10741 ggtcagacgg ccttcgacga atgcgcgtgc atagatgccc ggggcaacgt gaccttggaa
    10801 gaagaccaaa tcgccttctt caccttcacc tttggctttc cagaagtggt tgaaaccgac
    10861 ttcgtacatg gtggcggcag attggaaaga tgcgatgtgc ccacccagtt ccaaatcttt
    10921 cttgccggcg cgcaatacga tggcggcggc gttccagcgt acgaatgcgc gaatgcggtg
    10981 ttcgatgttt tggtcgcccg gaatgccttt ttcgttttca accgaaacgg tattcaaata
    11041 cggggtggtc gtgccgtggg gcatacgtac gcctttgtcg cggcagtatt tgagcaggtt
    11101 ttccaagagg tattgcgcgc gttcgccgcc ttcatattcg aggacggagc ttaacgcgtc
    11161 cagccactct tgggtttcga tagggtcaac atcgtgtaat tgggtggaca tagtatctat
    11221 cctttatgtt gagtgtttaa tcggaaggga gggtgtagcc aaccccttta ttttcgtttg
    11281 tgaaaaataa taagcaaaaa cgaaaatttc taaatcaaac cgaaacaaaa taatttaagt
    11341 ttaatgtttt caaaaaatta taaaagtctt ggaagcaagg gaaaacttga aaaaaaatgt
    11401 tcggtctgct ccgcacgaaa tcctatcagc aatcgggtct gctggcaaat aaccatgctt
    11461 ttaaaagcag gttttatact gaagttggcg tttggtaagg acaggtcttt ttgattgcga
    11521 aaacattctg tttaattttg gttatatttt ttcggaattg tgggatatcg aatcgttatg
    11581 tctctgtcgg caattttcct attgcagaaa atctatacac aagctttgtg gacaaccgtg
    11641 ttgataagcc acggcttgtg ttaaaaaagt cttacgcaac aaatgtacgc ttattttgat
    11701 taaaaattag gcaaatttaa atctataaaa atcatgtaat tatgttcaat atgatgtttc
    11761 tggtcatgtt tttgccgtct gttatggggt ttgtcccgcg tttggggcag ggggtgaatt
    11821 ttggaggttg gtgcaaaacc tgcttttttc gcgttacaat ctgcacccga tttacttttg
    11881 aatctgcctg tttggaaaaa tacttttatg aaagccagcc aattctttat ctctacttta
    11941 aaagaagccc ctgccgaagc cgcgtttgcc agccacaagc tgatgattcg cgccggtctg
    12001 attaaagcca acgcgtccgg tctttatact tggatgccga tggggctgcg cgtgttacgc
    12061 aaagtcgaaa acgtcgtgcg cgaggaaatg gcgcgcgcgg gcagcgtgga gctgctgatg
    12121 ccggtggtgc agcctgccga actgtggcag gaatccggcc gctgggagtt ttacggtaaa
    12181 gaactgctgc gcctgaaaga ccgccacgaa cgcgatttct gcatgggccc gacctgcgag
    12241 gaagtcatcg ccgacatcgt gcgcaaagaa atcaacagct acaaacaact gccgaaaaat
    12301 ttttaccaca tccaaaccaa attccgcgac gaagtgcgcc cgcgtttcgg cgtgatgcgc
    12361 gcgcgcgaat ttgtgatgaa agatgcttat tccttccacg ccgactacgc ctcgcttcag
    12421 gcgacctatg atgccatgta tgacgcttac tgccgcatct ttacccgtct gggtttggcg
    12481 ttccgccccg tcgccgcaga caccggcagc atcggcggta cgggttcgca cgagtttcaa
    12541 gtgttggcgg aaagcggcga agatgtgatt gcatacagcg acacttccga ttacgccgcc
    12601 aatatcgagt tggcaccgac cttgccgctt aaaggtgaac gtgccgccgc tcaggctgtg
    12661 ttgaccaaag tacatacacc aaacgtcaaa accattgagt ctttggttga attcctgaat
    12721 attccggttg aacaaaccct caaatccatc gtggttgaag gcgaaaacga aggcgaactc
    12781 gtcctactgc tgttgcgtgg cgaccatgag tttaacgaca tcaaggcaga aaaactggcg
    12841 ggcgtaaaat cgccactgac tatggcaagc cctgccgcga ttgttgaaca attcggcgca
    12901 aacggcggtt cgctcggccc cgtcggcttc acaggcaaag tctatgccga tttcgctacc
    12961 gaaaaaggcg cggactgggt tatcggcgca aacgaagacg actaccacta taccggcttc
    13021 aacttcggcc gcgatgccgc cgagcctgaa ttcgtcgatt tgcgtaatgt ggtcgaaggc
    13081 gacgaaagcc ctgacgggca aggccgtctg aaactggcgc gcggcatcga agtcggacat
    13141 gtcttccagt tgcgcggcaa atatacccaa gctatgaacg tcagcttcct cgacaataac
    13201 ggcaaatcgc aaatcatgga aatgggctgc tacggcatcg gcatcacccg cgtcgttgcc
    13261 gccgccatcg agcagaataa cgacgaaaaa ggcatcattt ggaccaaagc gatggcgccg
    13321 tttgaagtcg tcatcgtgcc gatgaactac aaaaaatccg acactgtgcg tgaagccgcc
    13381 gacagaatct atgccgaatt gctggcggca ggcgcggatg tgctgctgga cgaccgcgac
    13441 gaacgcgcag gcgtattgct gaacgattcc gagcttctcg gtatcccgca ccgcatcgtc
    13501 atcggcgacc gcgccttgaa agaaggcaat gtcgaatacg ccgaacgccg cgacaacgaa
    13561 gcgcaggcag ttgcaatcgg agaaattgtt gcgcgtgtaa cagcttcatt aaatgcgtaa
    13621 gtctggtcaa atgccgtctg aaaataattt cagacggcat ttttattttg ggggaaagtg
    13681 aagtggcttc agtattttta gaaggagaag cagtcgaggt cggcaatatt ttctgtatcg
    13741 gcaggaacta tgccgcacat gtcgaagagt taaaaaacga aataccttca gaacctgtgg
    13801 tgtttatgaa gccgtcaggc agcattttga acagcggcgg tacaatcttg ctgcccgagt
    13861 tcagtaggga tgtgcagttt gagtgcgaac tagtgttgct gattggccgg gattcagacg
    13921 gcacgggcga gggtgaagat attttgggat gcgtggcggg gtacggcgtg ggtttggatt
    13981 tgaccgcgcg ggacatccaa tgccgtctga aggcgcaggg gctgccctgg ctgaaggcaa
    14041 aagggttcag gcattctgcg tgcgtgtcgg attttgcggc ggcagacaga atcggtaatc
    14101 aagataaggt gttgttttca ttaaaacaaa acggcgtatt gaaacagcgc ggggagactg
    14161 gtttgatgat ttacccgatt cgggaaattt tacacaaact ggcggcggat tacggtttgg
    14221 ggaaagggga tttggtgttt accggaacgc cctccggcgt gggcgcaatc ggtgcggggg
    14281 acaatttggc attggagctg gacggcttgg tgtgcgcctc tttcacgata gggtgttaac
    14341 cgcgccgctt aaccttcacg cccgttgaaa cattccgccg ggccgccctc gagaaaaccg
    14401 tgcaggatgg cttgcgccgc cacttggtcg agcaccgatt tgcgtttttt gcccaagacc
    14461 tgtgcttccg aaagcaggct ttcggcatag acggacgaca gccgttcgtc aacccaatag
    14521 acggggagat tgaacctgcc gttcagcctg cgtccaaact tgcgcgacag gtgcgtcatt
    14581 tcatgttccg tgccgtcggc atgcacgggc agtccgacga caaaataacg cggctgccat
    14641 tcttgaacca gcttggcgat tgccgcgaat ttttcatcgt tgctgccgcc ggtaacggtg
    14701 gccagcggat gggacagccc caattccgca tcgccctgcg ccacgccgat gcgcgcttcg
    14761 ccgaagtcga atgccagtgc cgttcctttt ggaattttat gcatggccgg ctcccgaaaa
    14821 cagggcgagc gggtcgatgc cgagtttggc gaatgcggcg gcgtaacggt gttcgtaggg
    14881 gatgtcgaac aggatgtgtt cgtcggcggg aacggtcagc cacgcattgt cggcaagttc
    14941 gcgttcgagc tgccctttgc tccagctcga atagcctatg ctgatcaagg ctttgtcaac
    15001 cgcgccttcg cgtgaaatgt tttcaagcac atcgcgggaa gaggtcagcg cgatgccgtc
    15061 tgaaacgccg atgctgcttt gccagttgcc gatcggagtg tggacgacgt aaccgcgctc
    15121 gacctgcacc ggcccgccca tcatcacgct gtcgtgctgc atccgcatgg ggatgttttt
    15181 gccggtggcg gaaaaaatca tgtccatcgt aatcggagag ggtttgttga tggcgatacc
    15241 gagtgcgccg tcttcatcgt gtttgcagat atagacgacc gattgtgaaa aaaacgcgtc
    15301 ttccatatcg ggcatggcga cgagaaagtg gttggacagg ttcatatcag cgtttgtcgg
    15361 gattttttat cgggttggaa ataatgcagg cgccggcaag cagtttgccg gaagtatcgg
    15421 cttgcacccc gtcggtttgc ggtatgccgc tgccgaaaca ggaaaccgcg cttaaggaat
    15481 ttttcggcga tccttggacg attttatcgc tgtaaaccaa aataggcgaa ggctttgcgt
    15541 ttggggtcgt aataacggac aatctgccgg ctcttgaacg cgaagctcgc gccgcgcttg
    15601 aaaacttctt tcggtttgcg cacggcggtt tcgtcaaaag aaatcgaaga tgccgtctga
    15661 acgcacgaaa ccgatgcgtc ggacgcgtcc tcttccaaat tgaccatttc cttcaagccg
    15721 cctttttttg catacgaaat ataacaggca accccttgaa cgtcgggatc gtcgaatcct
    15781 tccacttcga tacggtcgtt tttgcccaac atgttgaaaa cggtacttgc ccgtccgatt
    15841 ttatcggttt cgccgctgcc gcaggcagtc ggcaggacgg cggcagacag cagtagcagt
    15901 ctgttcatca aaatttcctt atcggttgaa tccccgtttt ccggaaggcg gcagggtttg
    15961 ctttgtttgg aggggcgcac gctcccaaat cgggcaacat acggtacgca gcttacatgt
    16021 gctaccctgt gtgtcggaac acaatatccg ttgcagcatt gaaaatatgc cgcacaatat
    16081 aaggctgttt gagccgattg caagtatccg cgcaaagaag gtgcaagatt gggcaaacgg
    16141 cattttcaga cggcataact gacagtataa tccaaacgtc cggctgcttt cgtgcagcct
    16201 tcagtattat ccaacttttc cgaaggtcga accatgcgct acaaacccct tctgcttgcc
    16261 ctgatgctcg ttttttccac gcccgccgtt gccgcccacg acgcggcaca caaccgttcc
    16321 gccgaagtga aaaaacaggc gaagaacaaa aaagaacagc ccgaagcggc ggaaggcaaa
    16381 aaagaaaaag gcaaaaatgc cgcagtgaaa gataaaaaaa caggcggcaa agaggcggca
    16441 aaagagttca aaaaaaccgc caaaaaccgc aaagaagcag agaaggaggc gacatccagg
    16501 cagtctgcgc gcaaaggacg cgaaggggat aaggaatcga aggcggaaca caaaaaggca
    16561 catggcaagc ccgtgtccgg atccaaagaa aaaaacgcaa aaacacagcc tgaaaacaaa
    16621 caaggcaaaa aaggggcaaa aggacagggc aatccgcgca agggcggcaa ggcggaaaaa
    16681 gacactgttt ctgcaaataa aaaagcccgt tccgacaaga acggcaaagc agtgaaacag
    16741 gacaaaaaat acagggaaga gaaaaatgcc aaaaccgatt ccgacgaatt gaaagccgcc
    16801 gttgccgctg ccaccaatga tgtcgaaaac aaaaaagccc tgctcaaaca aagcgaagga
    16861 atgctgcttc atgtcagcaa ttccctcaaa cagcttcagg aagagcgtat ccgccaagaa
    16921 cgtatccgcc aagagcgtat ccgtcaggcg cgcggcaacc ttgcttccgt caaccgcaaa
    16981 cagcgcgagg cttgggacaa attccaaaaa ctcaataccg agctgaaccg tttgaaaacg
    17041 gaagtcgccg ctacgaaagc gcagatttcc cgtttcgtat cggggaacta taaaaacagc
    17101 cggccgaatg cggttgccct gttcctgaaa aacgccgaac cgggtcagaa aaaccgcttt
    17161 ttgcgttata cgcgttacgt aaacgcctcc aatcgggaag ttgtcaagga tttggaaaaa
    17221 cagcagaagg ctttggcggt acaagagcag aaaatcaaca atgagcttgc ccgtttgaag
    17281 aaaattcagg caaacgtgca atccctgctg aaaaaacagg gtgtaaccga tgcggcggaa
    17341 cagacggaaa gccgcagaca gaatgccaaa atcgccaaag atgcccgaaa actgctggaa
    17401 cagaaaggga ccgagcagca actgaacaag ctcttgagca atttggagaa gaaaaaggcc
    17461 gaacaccgca ttcaggatgc ggaagcaaaa agaaaattgg ctgaagccag actggcggct
    17521 gccgaaaaag ccagaaaaga aaaagaagcg gcgcagcaga aggctgaagc gcgacgtgcg
    17581 gaaatgtcca acctgaccgc cgaagacagg aacatccaag cgccttcggt tatgggtatc
    17641 ggcagtgccg acggtttcag ccgcatgcag ggacgtttga aaaaaccggt tgacggtgtg
    17701 ccgaccgggc ttttcgggca gaaccggagc ggcggcgatg tttggaaagg cgtgttctat
    17761 tccactgcgc ctgcaacggt tgaaagcatt gcgccgggaa cggtaagcta tgcggacgag
    17821 ttggacggct acggcaaagt ggtcgtgatc gatcacggcg agaactacat cagcatctat
    17881 gccggtttga gcgaaatttc cgccggcaag ggttatacgg tcgcggcagg aagcaaaatc
    17941 ggcacgagcg ggtcgctgcc ggacggggaa gaggggcttt acctgcaaat acgttatcaa
    18001 ggtcaggtgt tgaacccttc gggctggata cgttgatcgg attgccgaaa cggcaggctt
    18061 tatgcaaatc gtgccgatat ggtgcgctgt tctgtgaagt ttgccgtttg ccgtacctgt
    18121 gttttccggt ttttggaaat caagagagaa agttaaagaa gaatgtcgaa acctgttttt
    18181 aagaaaatcg cactttatac tttgggtgca atcagcggcg tggccgtaag tctggcggtg
    18241 cagggttttg ccgccgagaa ggacgggcgg gataacgaag tcctgccggt gcaatccatc
    18301 cgtacgatgg cggaggttta cggtcagatt aaggcaaact actatcatga caaacccgat
    18361 gccgatttgt ttgaaggtgc gatgaagggt atggtggccg gtttggatcc gcattccgaa
    18421 tatatggata aaaaaggtta tgccgagata aaggagtcca ccagcggcga atttggcggc
    18481 ttggggatgg aaatcgggca ggaagacggt tttgtcaaag tggtttcgcc gattgaggac
    18541 acgcctgccg aacgggcgga ggtgaaaagc ggcgatttca ttgtgaaaat cgataatgtt
    18601 tcgacgcgcg gtatgacggt cagcgaagcg gtgaaaaaaa tgcggggcaa gccgggtacg
    18661 aagattactt tgacgctgtc gcgcaaaaat gccgacaagc cgatagtcgt caacctgacc
    18721 cgtgccatta ttaaagtgaa aagcgtccgc catcacctga tcgaacccga ttacggctat
    18781 atccgcgtgt cgcagttcca agagcggacg gtcgaaagcg tcaataccgc cgcaaaagag
    18841 ctggtaaagg aaaataaagg aaaaccgctc aaggggctgg tgttggattt gcgcgacgac
    18901 cccggcgggc ttttgaccgg cgcggtcggc gtgtcggcgg cgtttctgcc gtctgaagcg
    18961 gtcgtcgtca gcaccaaggg acgcgacggc aaagacggca tggtactgaa agccgttccc
    19021 gaggattatg tgtacggtat gggcggcgat cctttggcgg gtattcctgc cgagttgaaa
    19081 acgattccga tggcggtatt ggtcaattcc ggttcggctt ccgcgtcgga gattgtcgcc
    19141 ggcgcattgc aggaccacaa acgcgcggtc atcgtcggta cgcagagctt cggtaaaggt
    19201 tcggttcaga ctttgattcc tttgtccaac ggcagcgcgg tcaagttgac gaccgccctg
    19261 tattacacgc cgaacgaccg ttccattcag gcacagggga ttgttcccga tgtcgaagta
    19321 aaagataagg aacgtacttt tgaaagccgc gaggcggacc tggtcggaca catcggcaat
    19381 cccttgggcg gcgaggatgt gaacagtgaa acccttgccg taccgcttga aaaagatgcg
    19441 gataagcccg ctgcaaaaga aaaaggtaaa aagaaaaagg acgaggattt gtcttcaagg
    19501 cggattccga accctgcgaa agacgatcag ttgcgtaagg ctttggattt ggtcaagtcg
    19561 cccgagcagt ggcagaagtc tttggggctg gcggcgaaaa agccggtttc aaataaagat
    19621 aaaaaagata agaagtaggt tttgacgatg ccgtctgaaa gggtttcaga cggcatatta
    19681 tgtttgaaag gacaggttat gagcgatttt ttaccggaat ttgaaccgtg cggcatttat
    19741 agtggattaa caaaaatcag gacaaggcga cgaagccgca gacagtacaa atagtacggc
    19801 aaggcgaggt aacgccggac cggtttaaat ttaatctact atacttgggt agcgattggg
    19861 tttcagacgg catacattca ggatttcacc gccttatacc gtctgaaaga cgtttctgac
    19921 ccatccctac tacacgcttt gtccgcaaac gtatcacagg caagattatg gaagtcatcc
    19981 gatacccaaa ttcccccttc aaactccacc aacccttccc gcccgcaggc gaccagccca
    20041 ccgccattgc gggcctgctc gaagggcttt cagacggcct tgcctaccaa accctgctcg
    20101 gcgtaaccgg ttcgggcaaa acctacacga tggcgaacgt catcgcgcaa agcggcagac
    20161 ccgccatcat tatggcgcac aacaaaaccc ttgccgccca gctttatgcc gaaatgcgcg
    20221 agtttttccc cgaaaacgca gtggaatatt tcgtgtcgta ttacgactat taccagcccg
    20281 aagcctatgt gcccagccgc gatttgttca tcgaaaaaga cagcgcgatc aacgaacaca
    20341 tcgagcagat gcgcctttcc gccaccaaaa acctgatgac gcgcgacgac gtgattatcg
    20401 tcgccaccgt gtccgccatt tacggtatcg gcgacccgac cgagtatcaa caaatggtgc
    20461 tgtccgtaaa agaaggcgac accatcgagc agcgcgacat catcgccacg ctcgtttcca
    20521 tgcagtacga acgcggcgat ttggacttca aacgcggcag cttccgcgtg cgcggcgacg
    20581 tgattgacgt gtaccccgcc gaaagctccg aaaacgcctt gcgtatcagc ctgtttgatg
    20641 acgaaatcga ccgcctcgat atgttcgacc cgctttcagg cagcctgcac cagcgtgtcg
    20701 gacgctacac cgtcttcccg tccagccact acgttacccc gcgcgacacc gtattgcgcg
    20761 cctgcgaatc catcaaagaa gaattgcgcg aacgcatcga atttttcgct cgcgaacaac
    20821 gccccgtcga gcaacaacgc atcgaacagc gcacccgttt cgacctcgaa atgctctacg
    20881 aaatgggctt ctgcaaaggc attgaaaact actcccgcca cttctccggt aaaaaagaag
    20941 gcgaaccgcc gcccacgctg atggactacc tgcccgacaa cgccatcatg ttcatcgacg
    21001 aaagccacgt taccgttacc caaatcggcg gcatgtacaa aggcgacgca tcgcgcaagc
    21061 aaaacctcgt ggactacggc ttccgcctgc cttccgcccg cgacaaccgc ccgctcaaat
    21121 tccacgaatt tgaaaaagtc atgccgcaaa ccgtcttcgt ttccgccacc cccgcgaaat
    21181 acgaagaaga acacgccgga caagtcgtcg aacaagtcgt ccgccccaca gggctggtcg
    21241 acccccaaac catcatccgc cccgtcgcca cccaagtcga cgatttaatg agcgaaatca
    21301 acgaccgtat tcaaaaaggc gaacgtgtgc tcgttaccac cctcaccaaa cgcatggcgg
    21361 agcaactcac cgactattac agcgaactcg gcatcaaagt gcgctacctg cacagcgaca
    21421 tcgacaccgt cgaacgcgtt gaaatcatta gagatttgcg gctcggcctg tttgacgtac
    21481 tcgttggcat caacctgttg cgcgaaggcc tcgacatccc cgaagtctcc ctcgtcgcca
    21541 tcctcgatgc cgacaaagaa ggcttcctgc gctcccaccg cagcctgatt caaaccatag
    21601 gccgcgccgc gcgcaacgtg aacggcgtcg ccatcctgta cgccgacaaa attaccgact
    21661 ccatgaaagc cgccgtcgac gaaaccgaac gccgccgcga aaaacagatt aaattcaacg
    21721 aagaacacgg tatcgtgccg cagcagatta aaaaacaggt caaagacatc atcgacggcg
    21781 tgtaccacga agaagacagt ggcaaaggcc gtagacaagg caaaaacaag gtcaaagtcg
    21841 gcgaaatcca caacgaagaa gacgcgatta aagaaatcgc caaactggaa aaagccatgc
    21901 agcaggcggc tagggattta cagtttgaag aagctgctgt gttgagggat aggattagga
    21961 atattaaaga gaatttgttg tttggggcgg agtgattttg aaatagtaat cgcagcctga
    22021 atacatagcg tgtgcgccac tggcgcgcgc tcattgtgtt atcaggaatc cttgaaatca
    22081 tgtacgcagc ttgcatcaca catcctagct atacataaac aacaaggccg tctgaatttt
    22141 cagacggcct tttccgttta caactttact acttattcaa taactacacg tgcattcaga
    22201 ggctgtacgg ggcggttgtt ttccgaaccg acggcgcggg tgaatttttc cgcttgcgct
    22261 tggtcgatgt ggtcataagt tttcaacacc aaccatgata cgccctctgt gcacggcggc
    22321 gtggtcagcg aaccggcaaa gcggtagtat ttcaaccgtt tcggcagtag ggtggatgcg
    22381 tcgaacggtt ggttgagttt cacttttcct gcggtcatcg gcatgacgtt ccagatggaa
    22441 gacaggcggc cgttggtttt gccggcttca tacagcacgg ctaatactaa aggctgtttg
    22501 ttttcgtcta agtggacgaa gtgagcttcc atcgggaaag tgcggccttt gatttggttt
    22561 tcgctcggca cgtggaagtg gaactgtttc agggtatagg tgcggccgtt cacggtcagg
    22621 gtattgccgc cttcgggata attgacctga atggtgtggc cgttgttttc cacgtcaacc
    22681 atactcggtt tgtaattgac tttgatggcg ggcagtttgc cggaaacggt ttcggtaatg
    22741 tttaccggag attggttttt gccggtggag cacaaacgga attcttctga cagattgccc
    22801 cagctttcgg gagagtcgtg tccggtatag ccccaatggg tgtgattgcc gtgtgcggcg
    22861 gcggagaaag cggtacaggc caacagcagg acagcggtca ggcggggtaa agtgcggggg
    22921 aaacgaggca ttgtaagatc ctttctatta aggagtagaa aaaaggttgc agtgtgtatg
    22981 taa
//
LOCUS       DAWXHA010000016        22742 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.016, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000016 DAWXHA010000000
VERSION     DAWXHA010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22742
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.016"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(244..1083)
                     /locus_tag="AABD07_000514"
     CDS             complement(244..1083)
                     /locus_tag="AABD07_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HFB2355102.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1368..1443
                     /locus_tag="AABD07_000515"
     tRNA            1368..1443
                     /locus_tag="AABD07_000515"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1401..1403,aa:Arg,seq:ccg)
     gene            complement(1508..2701)
                     /locus_tag="AABD07_000516"
     CDS             complement(1508..2701)
                     /locus_tag="AABD07_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HFB2355103.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGRMP
                     VLESVSRAETARTAVPAPSPYLPMEGLDVYRSAVQHLLFGKGNPALAQGRIVTVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSERQWDEVLQIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMDLPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSSELYALWQNEVYMMRDRIRAMRQKLYGVLTARIP
                     DRDFTYFIKQRGMFGYTGLSVGQVRRLRDEFAVYLLDSGRMCVAGLNTSNITYVADAL
                     AEVLK"
     gene            complement(2721..3809)
                     /gene="trmA"
                     /locus_tag="AABD07_000517"
     CDS             complement(2721..3809)
                     /gene="trmA"
                     /locus_tag="AABD07_000517"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HFB2355104.1"
                     /translation="MNDYTQQLQGKKDYLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASLIRCDRFDAASEAVNCLMPELIAVAAQSAELRNHW
                     YAVEFLSTLSGEMLVTMIYHKRLDDEWMKAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLRVGDRDFHYRQIEGSFTQPNAAVCRKMLEWACRAAEGLGGDLLELYCGNGNFTL
                     PLSRYFRQVLATEISKTSVSAAQWNIEANWIGNIKIARLSAEEFTEAYTGKREFTRLK
                     ESGIVLTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLTETH
                     TVGRAALFDQFPFTHHIESGVLLKKKIL"
     gene            3956..5056
                     /gene="aroC"
                     /locus_tag="AABD07_000518"
     CDS             3956..5056
                     /gene="aroC"
                     /locus_tag="AABD07_000518"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HFB2355105.1"
                     /translation="MAGNTFGQIFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATAF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKKIRFEGSEHISQNPFFAANQSQIAELEHYMDGVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDICVNIAIKPTSSIATPRRSIDIHGNPVELATRGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVAADTPDISRSDK"
     gene            5147..5572
                     /locus_tag="AABD07_000519"
     CDS             5147..5572
                     /locus_tag="AABD07_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HFB2355106.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDSALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETPSVEAEAAESSAAE"
     gene            complement(5646..7631)
                     /locus_tag="AABD07_000520"
     CDS             complement(5646..7631)
                     /locus_tag="AABD07_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IIA DNA topoisomerase subunit B"
                     /protein_id="HFB2355107.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATEIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVSVKRDGKVHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDGHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTSLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSACVLDPQFQGQTKDKLTNRDALKLVAAVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARIRSVKKIEKKKGSGVAILPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHAINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAQLDI"
     gene            complement(7698..8306)
                     /locus_tag="AABD07_000521"
     CDS             complement(7698..8306)
                     /locus_tag="AABD07_000521"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HFB2355108.1"
                     /translation="MLEPYRPICQNRPICGKIPRLNLTEGDTVLDREGYRPNVGIILI
                     NERNEVFWGKRVREHSWQFPQGGIKPGESPETAMYRELYEEVGLLPQHVKIVGRTRDW
                     LRYDVPNNWVRREWRGSYRGQKQIWYLLRLTGRDCDVNLRATRHPEFDGWRWHQYWAP
                     VDEVIDFKRDVYLGALKELSSRFLRGMESYEDFAARQPSGNR"
     gene            8388..9683
                     /gene="serS"
                     /locus_tag="AABD07_000522"
     CDS             8388..9683
                     /gene="serS"
                     /locus_tag="AABD07_000522"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HFB2355109.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPPGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHMLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYGALEEMVGHAENILKALELPYRVITLCTGDMG
                     FSAAKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVTKLEVK"
     gene            complement(9756..10754)
                     /locus_tag="AABD07_000523"
     CDS             complement(9756..10754)
                     /locus_tag="AABD07_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HFB2355110.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAACIFVNDDASRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEVEKLGGRYVDLDELYARSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKCRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10879..11955)
                     /gene="prfA"
                     /locus_tag="AABD07_000524"
     CDS             complement(10879..11955)
                     /gene="prfA"
                     /locus_tag="AABD07_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HFB2355111.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREVQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(12045..12815)
                     /locus_tag="AABD07_000525"
     CDS             complement(12045..12815)
                     /locus_tag="AABD07_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFB2355112.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATCPQDW
                     QDVAELSEMPSEHGQIRIALGIHPWFSDGIAEQDFSGLEAVLVRYPRAWVGEIGLDFY
                     DKTQTPPQRERQIQVFSRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFTQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLENTV
                     NTPANILRIAEIAAEIRGTGAAEIAAITERNADSLLRP"
     gene            complement(12818..13810)
                     /locus_tag="AABD07_000526"
     CDS             complement(12818..13810)
                     /locus_tag="AABD07_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HFB2355113.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSAGLRPDTALVGQALAPFSDGMDFD
                     WHVCEPLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANMFALALQGL
                     DKPIVLTGSQWPYNAEGSDAPRNLVTAVAAFPLGLKQTLIAFDGKLYPAVGSSKISTE
                     TAAGFGNAHFGALAEWDETRGWHNVRIPNQDAADVSDGLEIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAQALILQSYGHGNTSAGEGFIRAVQDFTQQGKLLLNISQVPQGC
                     AAAVYAQGDALRRAGVVNGGKCNLETATALMTLAVSEGWGADGVKHELQRLGLV"
     gene            complement(13877..14560)
                     /locus_tag="AABD07_000527"
     CDS             complement(13877..14560)
                     /locus_tag="AABD07_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFB2355114.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLAGDGVMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14750..16084)
                     /gene="glmM"
                     /locus_tag="AABD07_000528"
     CDS             complement(14750..16084)
                     /gene="glmM"
                     /locus_tag="AABD07_000528"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HFB2355115.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNTYSDNGIKFFAEGGVKLSDEVELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPGHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGNEPNGYNINEK
                     CGATHTKTLQAAVLQNEADYGIALDGDGDRLMMVDKNRQVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQILNQDLAAVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIAAAIGGI"
     gene            complement(16214..17068)
                     /gene="folP"
                     /locus_tag="AABD07_000529"
     CDS             complement(16214..17068)
                     /gene="folP"
                     /locus_tag="AABD07_000529"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HFB2355116.1"
                     /translation="MARHVWRAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRPGADFVPPEEEEWARVEPVLAEAAGWGVPVSLDTR
                     RTVVMEKALALGGIDIINDVAALTDEGAVELLARQADTGICLMHMRGLPETMQDNPKY
                     QDVVGEVARYLKTRSETCVAAGIAPQRITLDPGFGFGKNLQHNIALMRHLPELMAETG
                     LPLLIGVSRKSMIGELTGEADAAARVHGSVAAALASVARGAQIVRVHDVKATADALKV
                     WEALGVNR"
     gene            complement(17208..18101)
                     /locus_tag="AABD07_000530"
     CDS             complement(17208..18101)
                     /locus_tag="AABD07_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HFB2355117.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWSNADAVFLDPFFTSANLYDTLSADEGRGRCRRLAEQAASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLGHTKGHPYRLDVESIVKVRQISHLPVIANITGLWSRDMPQEILY
                     GLAKAAGACGIVGTCFEKAGG"
     gene            18192..20294
                     /locus_tag="AABD07_000531"
     CDS             18192..20294
                     /locus_tag="AABD07_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HFB2355118.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTMLLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIRRRLLPRPTVILKNLTITQPDGGRVAVSVKETKIGLSWK
                     NLWSDRIQVEKWVVSGADLALTRDRNGAWNIQDLFDGAKHSASVNRIIVENSTVRLNF
                     LQQQLILKEISLNLQSPDSSGQQFESSGILVWRKLSVPWKSRGLFLSDGIGTPEISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALK
                     NNSIKTGTVNGTFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRLQTNF
                     SLGSPLVWSRDNGLDAPRLHISTLQDTVDRLPQPRFISRLDGSLSIPNLQNWNAELNG
                     TFDRQPVAAKFKYTREGAPHLEAAAALQKLNLAPYLDEFRQQNGKIFPDILGRLSGNV
                     EAHLKIGSIQLPGLQLDDMETYLHADKDHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTASGENRKQLIRSLQGSLSLNISN
                     GAWHGIDMDSILKNGLSGKISGSTPFYRFTLNSEISDGISRHIDTELFSDSLYVTSNG
                     YTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRKEKQK
                     ILEDTLLEQWQWLKPKEP"
     gene            complement(20358..21836)
                     /gene="ubiD"
                     /locus_tag="AABD07_000532"
     CDS             complement(20358..21836)
                     /gene="ubiD"
                     /locus_tag="AABD07_000532"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HFB2355119.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRVAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLVMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPSTILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGSDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQGHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFSEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMTGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATSKWPGETDREWGRVIKKDPAVTVKIDGIWGKLGL"
     gene            complement(21856..22371)
                     /locus_tag="AABD07_000533"
     CDS             complement(21856..22371)
                     /locus_tag="AABD07_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HFB2355120.1"
                     /translation="MHTCTSCGEKHEDMPATGFTAPYPYNQLSEEERIAYQAECDSDF
                     CIIRYSGQTDRFIRAALPIPIIGHQETLEYGVWVSVSEKSFNDYQSRFYDNPENAVYF
                     GMICNRLPPYETDTFGLHCNVVTQSDNQRPLLQLHQSGGHPPVRDFYHGMGYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22378..22695)
                     /locus_tag="AABD07_000534"
     CDS             complement(22378..22695)
                     /locus_tag="AABD07_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355121.1"
                     /translation="MYWYPVLVNLMMLAVFGSSLFAGQTVIEKLARLQQPDLPEKAVR
                     YTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYRKLV
                     LKV"
BASE COUNT         5057 a         6560 c         6012 g         5113 t
ORIGIN      
        1 caacgtcgag tgttgtacta ttttgttttt aattgactat aaaacaaatg ggttaaacca
       61 gtatccatac atcagctttt ttatcatcct actttttatt catccgatcg ggcagacaga
      121 tttcaaagat gaaaagccta ttctattcac acccatttga tgtcatttcc acacggacga
      181 acaaataaat tcccataaaa aaacggagca gatacctgcc ccgtttttta atttaatccg
      241 aatttagaat tttgcaccgg attggtttgc catatagtca acagccgctt tgacttcgtc
      301 atcgctcaaa cctgcattgc cgcctttggc cggcatcgcg ttaaagcctt caagggcatg
      361 tttgtgcaag gtttctttgc cttttttgat acgcggtgcc caatcgtctt ttttgcctat
      421 gccgggaata ccgggaatcg aaccgccgtg gcacacctga caggttgctt cgaagacttt
      481 tttaccgtca acgccgaccg caggggctgc cgcacccttg tcttctgcct tcgcttctgc
      541 cggagctgca ctatcggcag gagcagaagc tgttcctgaa gcggcattgt cggcaggcgc
      601 agcctcatca ggattcggga aagaaccgcc gcttttgttc gccatgtagg taatcgcccg
      661 tttgagttcc tgatcggtca ggtctgccgc accgcctttg gcaggcatgg cgttaaagcc
      721 gttcagcgcg tgttggaaca aggtatcgaa gccttgcgcg atacgcggcg cccagtcgcc
      781 gttgtgttcc agtttcggag cgttcggcac attgctgtcc gccgcgtggc attggataca
      841 gattttgccg aaaatctgtt cgccttggcg ttcgccgacg gggatgccgt cacccatcgt
      901 caattgtccg acaggctgga tgcgggtctg cgttgccgct tccgtagtgg catcgacatc
      961 gccgaacgat ccactgcccg ccagcttaat caggaaataa aggactgcaa taacaataac
     1021 gataccgctc acaagggtaa acagtgcaga gccttgggct ttgttgtcgc ggagttgttt
     1081 catttggtag gcctcgccgt caggttaggt tgtgctgtag attatagttt ggcgtgttaa
     1141 acacagttaa caatattttg ctggattata ctgaattcac agggtctttc caatcgctat
     1201 cattgaaaat atgaaaaaat ttgccaatgg tatctgtaca aaacaaataa tccgttgaaa
     1261 ataccggatt atctccaaga aaactcccct tgtgccgcca tacgccgcct gccggcgcaa
     1321 gataaccttt gccaatttgc agaatttacg ttaaccttac gttttccgca cccatagctc
     1381 agttggaaga gtgtcagttt ccgaagctgg aggtcacagg ttcgatccct gttgggtgcg
     1441 ccaattataa agaggccgtc tgaaagataa atatttttca gacggccttt tgacttactt
     1501 caaattctta tttcaacact tcggcaagcg catcggcgac ataagtgata tttgatgtat
     1561 tcagcccggc gacgcacatc ctgccggaat ccagcaggta aacggcaaat tcgtcgcgca
     1621 acctgcggac ttgccccacg ctcaaccccg tgtagccgaa cattccgcgc tgtttgatga
     1681 aataagtgaa atcgcggtcg gggattcggg cggtcaatac gccgtaaagt ttctgccgca
     1741 tcgcacggat gcggtcgcgc atcatataaa cttcgttttg ccacaaggcg taaagttcgg
     1801 agctgttcat cacgtcggcg gcgatatacg cgccgtgcgc gggcgggctg gagtagatgc
     1861 ggcggacggt gaatttgagt tgtccgaaca ccaaatccgc ttcttcttta ttggggcaaa
     1921 ccacgcttaa gccgccgacg cgttcgccgt agagcgacag gttttttgaa aacgaattgc
     1981 tgacaaacag cggcaaatcc atttccaccg ctttgcggac ggcgtaggca tcgctgtcca
     2041 aatcgccgcc gaagccttgg taggcgatgt ccataaacgg aatcagtttg cgcgttttga
     2101 tgatctgcaa cacttcgtcc cattgccgtt ccgacatatc cacgccggtc gggttgtggc
     2161 agcagggatg gaggatgagg acgctgtttt cgggcagggt gttgaaaaac gcggtcattt
     2221 cgtcgaattt cacgccgaca gtggcagggt cgtaatatgg gtaagtgccg acctcgaaac
     2281 ctgcgccttc aaaaatgccg cgatggttgt cccaagtcgg atcgctgacg taggcgcgcg
     2341 cttcgggaaa ccagcggtgc aggaaatccg ccccgacttt gagcgcgccc gagccgccca
     2401 gagtctgtac ggtaacgatg cgtccctgcg cgagcgcggg gttgcctttg ccgaacaaca
     2461 aatgctgcac cgcgctgcgg taaacgtcca aaccttccat cggcaggtag ggagacggcg
     2521 caggcacagc ggtgcgggcg gtttcggcac ggcttacgga ttccaatacg ggcattctgc
     2581 cttcgtcgtc gaaataaatg cctatgctca aattgacttt ttcggggcgc gggtcgtttt
     2641 tgaaggtttc gaccaaactc aaaatcgggt cgccgggata gtattcgatg tgtcggtaca
     2701 tagtccttac cttttgcttt tcaaaggatt ttctttttca acagtacgcc gctttcaata
     2761 tggtgcgtaa acgggaattg gtcgaacagg gcggcacgtc cgaccgtatg ggtttccgtc
     2821 aaggtgtcca aattggcgcg cagcgtttcg ggattgcagg aaatgtagat gatgttgtcg
     2881 aactgcgaca ccagcttcaa agtttcctca tcgatgccgg cacgcggcgg atcgacgaaa
     2941 atagtggaaa atgcgtaatc cgtcaaaaca ataccgctct ccttaaggcg tgtaaactca
     3001 cgttttccgg tataggcttc ggtaaactcc tcagcagaca ggcgggcgat tttgatgttg
     3061 cctatccagt ttgcctcaat attccattgc gccgcactga cggaggtttt ggagatttcg
     3121 gttgccaaaa cctgtcggaa atatcgggac agcggcaggg tgaaattgcc gttgccgcaa
     3181 tacagttcga gcaggtcgcc gcccaagcct tccgccgcgc ggcacgccca ttcgagcatt
     3241 ttccggcata cagcggcatt cggctgggta aagctgcctt cgatttggcg gtagtggaaa
     3301 tcgcggtcgc cgacgcgcag ggtttccgtc acatagtcct gttttaagac tattttctgc
     3361 cccctgctcc gcccgataac ggaaatatcc aactgttgct gtaacgcttg cgccgccttc
     3421 atccactcat catcaagcct tttgtggtaa atcatggtaa ccagcatttc cccgctgagc
     3481 gtggacagaa attcgacggc ataccaatgg tttctcagtt cggcagattg ggcggcaacg
     3541 gcaatcaatt cgggcatcag gcagttgact gcctctgaag cagcatcgaa acggtcgcaa
     3601 cggatcaggc ttgccccgct agccttctgc cctttttcaa acatggcgta aaacatttca
     3661 ccgccttcgt gccaaatgcg gaattcggcg cgcatgcggt agtgtttgtc cggagattcg
     3721 tacacttccc actcaggaac atccaaacct gcaaaaaggg ttttaaggta gtctttttta
     3781 ccttgaagct gctgcgtgta gtcattcata tcgctatcct gaaaaatcag gccggattat
     3841 aagccgattt tcctcgccgc acgcaaactc tttgactgcc gccccttcaa tgacggacgg
     3901 gcttttgtgc taaaatccgc catctttcca cactataccg ataaagggaa aaatcatggc
     3961 aggcaacact ttcggacaaa tcttcaccgt gaccaccttc ggcgaaagcc acggcgcggg
     4021 tttgggctgc atcatcgacg gctgcccgcc cggcttggaa ttaagcgaag cggatatcca
     4081 atttgacctc gaccggcgca aacccggcac cagccgccac gttacccaac gccgcgaagc
     4141 cgaccaagtc gaaatcctct ccggcgtatt cgaaggcaaa accaccggca cacccatcgc
     4201 cctcctaatc cgcaacaccg accagcgcag caaagactac ggcaacatcg ccaccgcctt
     4261 ccgccccgga cacgccgact atacctattg gcacaaatac ggtacgcgcg actaccgggg
     4321 cggcggcagg agttccgccc gcgaaaccgc agcccgcgtt gccgccggag ccgttgccaa
     4381 aaaatggctg aaagaaaaat tcggcacgga aatcaccgcc tacgttaccc aagtcggcga
     4441 aaaaaaaatc cggtttgaag gcagcgaaca catttcccaa aatccttttt ttgccgccaa
     4501 ccaaagccaa atcgccgaac tggaacacta tatggacggt gtgcgcaaat ccttggattc
     4561 cgtcggcgcg aaactgcata tcgaagccgc caacgtcccc gtcggtttgg gcgaacccgt
     4621 tttcgaccgc ctcgatgccg aaatcgccta cgcgatgatg ggcatcaacg ccgtcaaagg
     4681 cgtggaaatc ggcgcaggtt ttgacagcgt aacgcaacgc ggcagcgaac acggcgacga
     4741 actgaccccg caaggcttcc tgtccaacca ttcgggcggc atcctcggcg gcatcagcac
     4801 cgggcaagac atctgcgtca atatcgccat caaacccacc agctccatcg ccacaccgcg
     4861 ccgaagcatc gacattcacg gcaaccccgt cgaactcgcc acccgcggca ggcacgatcc
     4921 ctgcgtcggc ttgcgcgccg cgccgattgc cgaagctatg ctcgccttgg ttttaatcga
     4981 ccacgccctg cgccatcgtg cgcaaaatgc ggatgttgcc gcggatacgc ccgatatttc
     5041 ccgctcggac aagtaaaaag atttagccaa aacacgggct ttatactaaa ataccgacca
     5101 ttgccgtgcc gtctgaacgc acgattctta gaggaataca accgaaatga cacaagaaac
     5161 cgctttgggc gcggcactga aatccgccgt ccaaactatg agcaaaaaga aacagaccga
     5221 aatgatcgcc gaccacatct acggcaaata cgatgtattc aaacgcttca aaccgttggc
     5281 gctcggcatc gatcaggatt tgattgccgc tttgccgcaa tacgattccg cactgattgc
     5341 acgcgtcctc gccaaccact gccgccgtcc gcgctatctg aaagccttgg cgcgcggcgg
     5401 caaacgtttc gatttgaaca accgtttcaa aggcgaagtt acccccgaag aacaggcgat
     5461 tgcgcaaaac catcctttcg tgcaacaggc tttgcaacag cagtccgccc aagctgccgc
     5521 cgaaacgccg tctgttgaag ccgaagcagc cgaatcttcc gcagcagaat aaatccccaa
     5581 acgaaatgcc gtctgaaaac cgatttggtt tcagacggca ttttttcgta tgcggcaatc
     5641 acggctcaaa tatcgagttg cgccgtatcg ccttcgcgtt ccatccaagc gcggcgggcg
     5701 gcggcttcgc ctttgcccat cagtttgacg aagatgtcgc gcgtctcgtc atccgcgcct
     5761 tcggggattt gcacctgcaa caggcggcgg gtgtcggggt gcatggtggt gtctttgagc
     5821 tggtcggggt tcatctcgcc caagcctttg aaacggctga tggaataggc ggtttcttta
     5881 acgccttctt tttgcagccg ctctaaaatg ccgtcaagtt cgttttggtc gagggcgtag
     5941 aatttgcggg cgggtttgct tttgccttgt gcgttgacat cgacgcggaa cagcggcggc
     6001 tgggcgacgt agatgtgtcc gtcggcgacc agtttgggga agtggcggta gaacagggtc
     6061 aacagcaaaa cctgaatatg cgaaccgtcc acgtcggcat cggacaagat ggctattttg
     6121 ccgtagcgca ggccgcttaa gtcgggatgg tcgttgatgg cgtgcggatc gacaccgatg
     6181 gcgacggaaa tgtcgtggat ttcggcgttg ccgaaaagct ggtcggggtg gacttcaaag
     6241 ctattgagca ctttgccgcg caggggcagg atggcttgtg tggctttgtc gcgggcgagt
     6301 ttggcggagc cgccggcgga atcgccttcg acgaggaaga gttcgttttc gcggatgtct
     6361 tcgctttcac agtcggtcag cttaccgggc aggatggcga cgccgctgcc ttttttcttt
     6421 tcgatttttt taaccgaacg tatccgtgcc tgtgcctgac ggatggcgag ttcggcgatt
     6481 tttttgccga agtccacgtt ttggttcagc cacaattcca aaggatcgcc cgatacggcg
     6541 gcgacaagtt tcagcgcgtc gcggttggtc agcttgtctt tggtctgacc ttggaattgc
     6601 gggtcgagga cgcaggcgga gaggacgaag gcggtttttc cgaacacgtc gtcgctttgc
     6661 actttaacgc cgcgcggtaa gaggttgtgc aggttgatga aattgttgac ggcgttgaac
     6721 acggcttgtt tcaagcctgc ttcgtgcgtt ccgcccagcg aggtcgggat aaggttgacg
     6781 tagctttcgt tggcgcacga gccttcttcc agccaagtca aagcaaacgc ggcaccttcg
     6841 ccaatgctga aatcgccgtt gtggccgtct gaaatgtagt tttcgcagga gaacagcggc
     6901 acggcttcct gtgcgtcggc aatcaggtcg gtcagatagc ttttcagacc gtcggggtaa
     6961 tgccaggttt gggtgtgcgc ttcgtcttcg cctttgaccg gacgggtcag ggaaacgcgc
     7021 acgcccggca gcagcacggc tttggcgcgc aatagacgct cgagttcggg aatgctgtaa
     7081 ttcgggcttt caaaatattt gccgtccggc cacacgcgca cttcggtgcc gctgtctttg
     7141 acggcgcatt tgcccacttg tgccaacggt tcgaccacat cgccgccggc aaacacgatg
     7201 cggtggactt tgccgtctcg tttgacactg acttcaagtc gggtggaaag cgcgttggta
     7261 acggatacgc ccacaccgtg caggccgcct gaaaaggcat acgcactgcc gccgtctttt
     7321 ttgttgaact tgccgcccgc gtgcaggcgg gtaaacacga gttcgactac gggtacgcct
     7381 tcttcagggt gcaggccgac gggaatgccg cgcccgttgt cgcgcacgga aagcgaaccg
     7441 tcttcatgaa tttgcacgtc gatttcagtg gcgaaaccgc ccaacgcctc gtccgccgcg
     7501 ttgtcgatga cttcttggca gatatgtgtc gggctgtcgg tgcgggtgta catgccggga
     7561 cgttctttga ccggctccaa gcctttgagg acggtgatgc tggattcgct gtattggttg
     7621 tttttagcca taggaataat ctgaaagtaa gaaaaacaac gctttcagac ggcctgaaag
     7681 cgttgcgttc cgttatttta ccggttgccg gaaggttggc gggcggcaaa gtcttcataa
     7741 ctttccatac cgcgcaggaa gcgggaagag agttctttca acgcccccaa ataaacgtcg
     7801 cgtttgaaat caatcacttc gtcaacgggc gcccaatatt gatgccaacg ccagccgtca
     7861 aattcggggt ggcgggtggc gcgcaggttg acatcgcaat cccggccggt caggcgcagg
     7921 agataccaaa tctgcttctg cccgcgataa gagccgcgcc attcgcggcg cacccagttg
     7981 ttcggcacgt cgtaacgcag ccagtcgcgc gtccgcccga cgattttgac gtgttgcggc
     8041 agaagtccga cttcttcgta aagttcgcgg tacatcgcgg tttcggggct ttcgccgggc
     8101 ttgatgccgc cttgaggaaa ctgccatgaa tgttcgcgca cgcgcttacc ccaaaagact
     8161 tcgttacgtt cgttaattag gataataccg acattggggc gatagccttc cctgtccaac
     8221 acggtgtcgc cctccgttaa attcaatctt gggattttcc cacaaatcgg acggttttga
     8281 caaatcggac ggtatggttc aagcatgtcg aaacacggac ggattcggga aaatatctta
     8341 aatttggttt acaataatac gtttcaaatt aattccggaa tcagactatg ttagatatcc
     8401 aattgctccg cagcaacacc gccgccgttg ccgaacggct tgcacggcgc ggttatgact
     8461 ttgataccgc acgttttgac gcactggaag aacgacgcaa gtccgttcag gtgaaaaccg
     8521 aagaactaca agcctcgcgc aacagcattt ccaaacaaat cggcgcactg aaaggtcagg
     8581 gcaaacatga agaggcgcag gcggccatgg atcaagtcgc ccaaatcaaa accgatttgg
     8641 aacaggctgc cgccgatttg gatgccgttc aaaaagaatt ggacgcatgg ttgttgagca
     8701 tacctaacct gccgcacgaa agcgtacctc ccggtaaaga cgaaaccgaa aacgtcgaag
     8761 tccgcaaagt cggtacgccg cgcgaatttg attttgaaat caaagatcat gtcgatttgg
     8821 gcgagccttt gggcttggat ttcgaaggcg gcgcgaaact ttccggcgca cgatttaccg
     8881 tgatgcgcgg acaaatcgcc cgtctgcacc gcgccttggc gcaattcatg ctcgatacgc
     8941 acatgctgca acacggctac accgagcatt acacgcctta tatcgttgac gatacgacgc
     9001 tgcaaggcac aggtcagctg cccaaatttg cagaagattt gttccacgtt acccgcggcg
     9061 gcgatgaaac caaaaccacg caatatctga ttccgacagc cgaagttacc ctgaccaata
     9121 ccgttgccgg cagcattatc ccgtccgaac aactgccgct gaagctgacc gcgcattcgc
     9181 cctgtttccg cagtgaagcg ggatcatacg gcaaagacac gcgcggccta atccgccagc
     9241 accagttcga caaagtagaa atggtacaaa tcgttcatcc cgaaaaatca tacggcgcgc
     9301 tggaagaaat ggtcggccat gccgaaaaca tcctgaaggc tttggaactg ccctaccgcg
     9361 tgattaccct gtgtaccggc gacatgggtt tcagcgcggc caaaacgtat gacttggaag
     9421 tttgggttcc cgcacaaaat acctaccgcg aaatctcaag ctgctccaac tgcgaagatt
     9481 tccaagcacg ccgcatgaag gcgcgtttca aagacgaaaa cggcaaaaac cgcttggtac
     9541 ataccttaaa cggctccggt ttggcagtcg gtcgcacttt ggtcgcggtt ttggaaaacc
     9601 atcaaaacgc cgacggcagc atcaatatcc ccgccgcact gcaaccgtat atgggcggtg
     9661 ttaccaagtt ggaagtgaaa taagccttaa ccctgaacat aaatgccgtc tgaaacctgt
     9721 ttcagacggc atttccttta aactcttaaa acacatcaac cgtcggcacg aaccgcattg
     9781 ccgcaatcgc cggtctgtcc gacctcgcgg atattggaca gcgtaacttc cgaaatatta
     9841 cccaacgcct cttccgtcaa aaatgcctga tgtccggtaa acagtacgtt atgacaagac
     9901 gacaggcggc ggaacacgtc gtcggtaatc acatcgttgg atttgtcttc aaaaaacagc
     9961 tcgcgctcgt tctcgtacac atccatgccc aatgcaccga ttttccggca tttcaacgcc
    10021 tcgatggcgg cggcgctgtc aatcagcccg ccccggctgg tgttgataat catcacgccg
    10081 tctttcattt tgtcgaacgc cgcttcgttc agcatatagt ggttttccgg cgtggcggga
    10141 caatgcagcg tgatgatgtc cgatcgggca tacagctcgt ccaaatccac atacctgccg
    10201 ccgagttttt ccacttcggg gttgcaaaac ggatcgtaag ccagcaggtt cataccgaaa
    10261 ccctttaaaa tccgcatcgt tgcgataccg attttccccg tgccgataac gcccgccgtt
    10321 ttgccgtaca tattgaagcc ggtcagacct tccagcgaaa aattcgcatc gcgggtacgc
    10381 tggtaggctt tgtggatacg gcggttcaaa gtcagcatca gaccgaccgt atgttccgca
    10441 accgattcgg gcgaataggc aggcacgcgc acgactttca agcccaactc ttcagccgcc
    10501 ttcaaatcca cattattgaa gccggcacaa cgcaacgcca cagttttcac gccaatttgc
    10561 gccaattttt ccaacacggg ccggctggcg tcgtcgttta caaaaataca ggccgcttcc
    10621 gcgccttccg ccattttcgc cgttttcgca tccagcatga aatcaaaaaa ctccagctcg
    10681 aagccgaaat gccggttggc gcgggtaaaa tgttcgcggt catagctttt cgtaccgtaa
    10741 atcgcaatct tcatcaatat gtccagttgt cgtctatggt tgagaaacgg cataatacac
    10801 cgaattcaaa caaatcagta gaatatggcg gattaaaatt gatttcatgc acggcatttc
    10861 catttcaaaa cacaaaactc aatcgcccat cgccgccaga agctccgcct gatgttcggc
    10921 aatcagggca tcggtgattt ctgccaaatc gccgtccatc acaaaatcca gcttgtgcag
    10981 ggtgaggttg atgcggtggt ctgttaccct gccttgggga tagttgtagg tgcggatgcg
    11041 ttcgctgcgg tcgccgctgc cgatgaggga tttgcgttcg gcggcttctt tggcttggac
    11101 ttcgcgtttt tgcgcgtcgt tcaggcgggc ggcgaggact ttcatcgcct gcgctttgtt
    11161 ggcgtgttgg ctgcggccgt cttggcattc gaccaccatg cctgtcggca agtgggtaat
    11221 gcggacggcg gagtcggttt tgttaatgtg ctgaccgccc gcgccggatg cgcggaaggt
    11281 atcggtgcgc aggtcggcgg ggttcagttc gatgtcttcg agctcgtccg cttcgggcat
    11341 gacggcaacg gtacaggcgg aggtgtggat gcggccttgg ctttcggtgg cggggacgcg
    11401 ctgcacgcgg tgtccgcccg attcaaattt cagacggctg tacgcgccga gtccgacaat
    11461 acgggcgatg acttctttat agccgcccaa ttcgctttcg ttggcggaca cgatttcaac
    11521 ctgccagcgg ttgcgttcgg cgtagcggct gtacatacgc agcaaatcgc cggcaaacag
    11581 cgcggcttcg ccgccgcccg tgccggcgcg tatttcgata aagatgtttt tgtcgtcgtc
    11641 ggcatctttg ggcagcagca gtttttgcaa ttcggtatcg agttcgtcga ttttggcttt
    11701 cgccgcttcg atttcttcgg cggcaaagtc tttcatttcg gggtcggaca acatttcttc
    11761 ggcatccgcc aagtcgcttt gggcaagccg atagttttgg aatacttcga cgacgggggt
    11821 cagttcggcg tgttcgcgcg tgagcttgcg gtagttgtcc atatcggatg tggcttcggg
    11881 ttgccctaaa aggtgggtaa cttcttccaa ccggtcgccg agttgttgca gtttttctaa
    11941 gatagacggc ttcataattc ttccataaca aacgccgcct gaatttcaga cggcatcaaa
    12001 acgcggtcat tataatatat tttctgaata ttcaaaaaga taatctaggg acggagcaga
    12061 ctgtcggcat tgcgttccgt tatcgcggcg atttccgccg cgccggtacc gcgtatttcc
    12121 gcagcaattt cggcaatccg aagaatgttg gcaggcgtat tgacggtgtt ttccaacatg
    12181 aacgggctat ccgtttccaa tacgaaatcc ccgtcgttca aggctttaag cgtatcgcgc
    12241 actttacgcg cgttcggatt gagcagcagc gaaccgatgc cgattttgaa ccccagtttt
    12301 gtcaacacgc gcgcttcttc cgcgctgcct gagaaagcgt gaacgatgcc gccttgagta
    12361 aagcctgtct gtttgacggc ggcggcgatg tcggcggtgg ctttgagatt atggataatc
    12421 acgcggcggc gcagggtttg cgcgatggca agctggcggc taaaaacttg aatttgccgt
    12481 tcacgctgcg gcggcgtttg ggttttgtcg taaaaatcca agccgatttc gccgacccac
    12541 gctcgggggt aacgcaccaa tacggcttcc aaaccggaaa aatcctgttc cgcaatgccg
    12601 tctgaaaacc aaggatggat gcccagcgca atacggattt gaccgtgttc ggacggcatt
    12661 tccgacagtt ccgccacgtc ctgccaatcc tgcggacagg tagcgggaac gataaaccgc
    12721 cacacgcccg cctgtcgcgc ttcggcaagc acctgcgcca gattgccgcg caaaacggaa
    12781 tcggcaagat ggcaatgtgt gtcggtcagc ctcatcttca caccagcccc aaccgctgca
    12841 actcgtgttt caccccgtcc gcgccccatc cttcggaaac ggcaagcgtc atcaatgcgg
    12901 ttgcggtttc caaattgcat ttgccgccgt tgaccacgcc cgcccgacgc agcgcgtcgc
    12961 cctgtgcgta aacggcggca gcgcaaccct gcggcacttg gctgatgtta agcaacaatt
    13021 tgccttgctg cgtaaagtct tgcacggcgc ggatgaagcc ttcgccggcg gaggtattgc
    13081 cgtgtccgta gctttgcagg ataagggctt gggcgggaag ctgtccgagc ccgtcggcaa
    13141 gttcttggac ggcaaagccg gggataagcg tgcggacggc gatttttgcc tgcgggtcgg
    13201 gataacggat ttcgaggccg tctgaaacat ctgccgcgtc ctgattcggg atgcggacat
    13261 tgtgccagcc ccgggtttcg tcccactcgg caagtgcgcc gaaatgggca ttgccgaaac
    13321 cggcggcggt ttccgtgctg attttgctgc tgccgacggc gggatacagt ttgccgtcaa
    13381 aggcaataag cgtctgcttc aatccgagtg ggaatgcggc aacggcagtc accagattgc
    13441 gcggcgcgtc gctgccctct gcgttgtacg gccattgcga accggtcagg acgatcggtt
    13501 tgtccaaacc ttgcagggcg agggcgaaca tattggcggt ataggcgagt gtgtccgtgc
    13561 cgtgcagcac caaaacaccg tcgtactgcg gcagcgcggc ggcaatgatg tccagccaag
    13621 cgcaccagtt ttgcagttgg acggcggaag aatcaatcag cggctcacaa acgtgccaat
    13681 cgaaatccat gccgtctgaa aacggcgcga gtgcctgccc gaccagcgcg gtatcggggc
    13741 gcaagcccgc actgctttgc gtcatgccga tggtgccgcc ggtataaagg acaaaaattt
    13801 tctgtttcat ggctcattct gaaaatgcaa agaccgcctg aaacgcgaaa tgcgtccgga
    13861 cggtcgaaaa tccgatttac tgctgcttct gtgccgcttt tttcgctgcc ttttccgcct
    13921 tgcgtttggc gcgtttttcg ctcaattgtg cgcggtaaag ctgataatgt cggcgtttgc
    13981 gccaccagaa ccacgccagc gccgccgcca gcacgcccaa tgcgatgaag atgcccgatt
    14041 gcaggctgtg cattttcgcc atcagccaat cgatgttgtg cgcgccgtac tcgcccaagt
    14101 aaatccaaac gggcacggaa atcagcgcgg ccagcccgtc cataatcaga aagcgcagat
    14161 acgatacttt gcggctgatg ccggcggtaa cgaaaacggc agtccgcaaa cccggcagga
    14221 aacgggcgac aaacagaacc cagttgccgt atttgtcgaa tttttcctga acctgcgcgt
    14281 aacgtttcgg cgtcatgatg cgcgcaatcg gtttgaactt gaggattttc tgcccccaga
    14341 tgcgtccggc ggcaaacatc acgccgtcgc ccgccaacac gccgagcata ccgaccgcaa
    14401 acataatatg cggattggta taacccatac ccgaaatcac gccgcccgtt accaaggtca
    14461 aatcttcggg aatcggcacg ccgaaaccgc agatgaccaa aacgaaaaac acggccgcat
    14521 agccgtattc gacaaaaaag gcttccaaaa gggcaaacat agcggatatt ccattgtcgg
    14581 agataaaaag tcagaacaag ccgaaacatt ttctgcgcga aacggcattc tatcaaagat
    14641 tatgccgtct gaaagcggca gggggggcag attcgcgccc ccgccggacg ttcagacggc
    14701 atttaaacag gaaaaccgcc gctgttgaaa cggttttgcc tgattttgcc taaatgccgc
    14761 cgatggcggc ggcgatacgc tccgccccgt cgcgcgccca atcggcctga cgcgcctcga
    14821 ccatcacgcg cacgacgggt tcggttcccg aagcgcgcaa cacgacacgc cctttgcctt
    14881 cgagttcttt ttccacttcg gccaacacgt ctttcgaagc ctcctgccat ttctgaccct
    14941 tttggatgcg cacgttaatc atcgtttgcg gatacggctg ccagtcggcg caaacggcgg
    15001 cgaggtcttg gttcaggatt tgcagcgccg ccaagacttg cagcgcggaa ataatgccgt
    15061 cgccggtgtt atgtttgtcc atgcacaaaa tatggccgct ggcttcgccg ccgatgagcc
    15121 agccgcgttg gttcagctgt tccaacacat agcggtcgcc gactttggcg cggcagaaat
    15181 cgacgccctg ctctttcagg gcgatttcca tcgccatatt ggtcatgacc gttccgacca
    15241 cgccgccgat gttgatacct tctcgggcgc gggctttggc gatgacgtaa atcaggctgt
    15301 cgccgtcgta aacctgcctg tttttatcga ccatcatcag gcggtcgcca tcgccgtcca
    15361 aggcaatacc gtaatcggct tcgttttgca acacggcggc ttggagggtt ttggtatggg
    15421 tcgcgccgca tttttcgttg atgttgtagc cgttgggttc gttgccgatg ctgacgacct
    15481 gtgcgccgag ttcgtggaac actttgggtg caacgccgta tcctgcaccg ttggcggtat
    15541 cgataaccaa cttcaaaccc cgaaggtcgg aatggccggg gaaggtggat ttgcaaaact
    15601 cgatatagcg gtcgtccgca ccgctgatgc ggcgggcgcg tccgagacgt gcggacggtt
    15661 gggttttcat ttcttcatcg attttggctt cgatttccaa ctcgacttca tcggaaagtt
    15721 tcacgccgcc ttcggcaaag aatttgatgc cgttgtcgga ataggtgttg tgcgacgcgg
    15781 aaatcatcac gccggcggac aggcgcaatg cgcgggtcag ataagccaca ccgggcgtgg
    15841 gcaacggccc ggtctgtacc acattcacac ccgccgccgt aaagcccgct accagcgcgg
    15901 cttccagcat atagcctgaa atgcgcgtgt ctttgccgat gaggacggtc ggtttctgat
    15961 cggtatcgtg ctgcaccagc acctgccccg ccgcatagcc gagtttcaat acaaaatcgg
    16021 gcgtaatcgg aaactgaccg acttcgccgc gcacgccgtc cgtgccgaaa tatttttttg
    16081 ccatcatttg ctccgtgaat gtgaaccgtt gtccgagatt atacagtcag tttgcgccct
    16141 gctgcctgca ccgttgatgc cgtctgaagc cgtcccgccc ttttcagacg gcattcggcg
    16201 caaaaaccgc cgtttaccgg ttcacgccca acgcttccca caccttcaac gcgtccgccg
    16261 tcgccttcac atcgtgcacg cgcacgattt gcgctccgcg tgccacggaa gccaaagccg
    16321 ctgccacgct gccgtgtacg cgcgccgccg cgtccgcctc accggtcagc tcacctatca
    16381 tgcttttgcg cgacacaccg atcagcagcg gcaaaccggt ttccgccatc aattcgggca
    16441 aatgccgcat cagtgcgata ttgtgttgca ggttcttgcc gaagccgaaa cccgggtcga
    16501 gcgtaatccg ttgcggcgcg atgcctgccg cgacacaggt ttctgaccgt gttttcagat
    16561 aacgtgccac ttcgccgacc acatcctgat atttcggatt gtcctgcatg gtttcgggca
    16621 agccccgcat atgcatcagg caaatgcccg tgtccgcctg gcgcgccagc aattcgaccg
    16681 caccttcgtc ggtcaacgcc gccacatcat tgataatatc gatgccgccg agtgccaacg
    16741 ccttttccat aaccaccgtg cggcgcgtgt ccaaactgac gggaacaccc caccccgccg
    16801 cttccgccaa tacaggctca acccgcgccc attcttcttc ttcgggcgga acgaaatccg
    16861 cacccggccg cgtcgattcg ccgccgatgt cgagaatgtc cgcaccctct ttcaaaagcc
    16921 gttcggcatg cgccaaagct gtttgggcgt tttgcgaata cgcgccgccg tcggaaaaag
    16981 aatcgggcgt gagattcacg atgcccatga ttttcggttt gtccaaaccg atttcaaacc
    17041 gtcctgcccg ccaaacgtgt cgtgccatct gaactcctcc cgaaataaaa aacagattat
    17101 atgccgtctg aaaccgtctt gtgcgcttcg gacggcaccg ctattcgggc ggcagacggc
    17161 atgttgtccc aatgtctgcg ccgcctttga atctgccggc atgcctgcta tccgcccgcc
    17221 ttttcaaaac aggttccgac gattccgcac gcgcctgccg cctttgccaa gccgtacagg
    17281 atttcctgcg gcatatcgcg gctccataat cccgtaatat tcgcaatcac gggcagatgg
    17341 ctgatttggc ggactttcac gatggattcg acatccaaac ggtagggatg gcctttggta
    17401 tggcccaaca cgcccgactc gcccagaatc aggtggcggt tgccgcgcga gacgacatat
    17461 tctgcggcat tcaaccaatc ttcggcagaa tggtgcttgt ctttacacag aaccaaggga
    17521 atgttcagac ttccggcttc attcaatacg gcaagatcgg acatcagccc gccgcccaaa
    17581 tacaggatgt ccgctcccgc attcaaagcc gcttcgacat ggcggacgtt gcgaacgcgc
    17641 accaatacgg gtttccctgc gccatgcgcc gatgcggcct gttccgccaa ccgtctgcac
    17701 cgtccccgcc cttcatccgc acttaaagtg tcgtataagt ttgccgaagt gaaaaacgga
    17761 tccagaaaca ctgcatccgc attgctccat actgacggtt ctgcagcgat acggacggtt
    17821 tccccgccgc cgaaagccac gcctttggcg gcaacgcggc tgtcttccgc ccgattttcc
    17881 cgactgacgg ttttccatgt gtccaaaatg cggacggctt tctcgacctc cggcagcgtc
    17941 tgtacctccc tgacgctcaa aaccctatcg tcgccgattg cgccgatgac ggtacgctcg
    18001 tcgccgtgag aaatgtgttc tcgcagacct ctgctgcgga tgaaggcgac aacgccggca
    18061 atgtccgctt cggcggcacg cctgctcatg acaataatca tatttcctcc tgacacaaga
    18121 gacggcccgc ccaaaatagg atttttgcaa gccgtgttat actgtggcgt gttttacaga
    18181 ttgttcgggc tatggattta ttatcggttt tccacaaata ccgtctgaaa tatgcggtgg
    18241 cggtgctgac gatgctgctt ttggcggcag tcgggctgca cgcttccgta tatcgcacct
    18301 tcacgcccga aaacatccgc agccgcctcc aacaaagcat tgcccatacc caccggaaaa
    18361 tctcgtttga tgcggatata cggcgcaggc ttctgccccg cccgaccgtc atcctgaaaa
    18421 acctgaccat tacccaaccc gacggcggcc gggtcgccgt ttccgtcaaa gaaaccaaaa
    18481 tcggattgag ctggaaaaac ctgtggtcgg atcggataca ggttgaaaaa tgggtggttt
    18541 cgggtgcgga tcttgccctg acgcgcgaca gaaacggcgc ttggaacatc caagacctgt
    18601 tcgacggcgc gaaacactcc gcctcagtca accgcattat cgtcgaaaac agcaccgtcc
    18661 gcctcaattt cctgcagcaa cagcttatcc tgaaggaaat cagcctcaac ctgcaatccc
    18721 ccgattcgtc ggggcagcag tttgaaagtt cgggcatact ggtttggaga aagctgtccg
    18781 tcccgtggaa aagcaggggg ctgttccttt cagacggcat cggcacgccc gaaatctcac
    18841 cgttccattt tgaagcttcc acttcgctgg acggacacgg catcaccatt tccaccaccg
    18901 gcagcccttc tgtccgcttc aacgccggcg gagcggatgc cgccggcctc ggcctgcgtg
    18961 cagacacttc cttccgcaac ctccacctga ccgcgcaaat ccccgcactg gcactcaaaa
    19021 acaacagcat caaaaccggc acggtcaacg gcacgtttac cgccggcggc gaatatgccc
    19081 gatgggacgg ttcgttcaaa ctcgacaaag ccaacctgca ctccggcatc gccaacatcg
    19141 gcaacgccga aatctccggc agcttcaaaa caccgcgcct tcaaaccaat ttctccctcg
    19201 gctcgccgtt ggtttggagt cgggacaacg ggctggacgc cccgcgcctg cacatatcga
    19261 cccttcagga taccgtcgac cgcctgccgc aaccccgttt catcagccgg ctcgacggtt
    19321 cgctgtccat accgaatctg caaaattgga atgccgaatt aaacggcaca ttcgaccgcc
    19381 aacccgttgc cgcaaaattc aaatatacgc gggaaggcgc accgcacctg gaagccgccg
    19441 ccgcgctgca aaaattaaac ctcgccccct atcttgacga atttcggcaa caaaacggca
    19501 aaatattccc cgacatcctc ggcaggctgt ccggcaacgt cgaggcacac ctcaaaatcg
    19561 gcagcatcca actccccggc ttgcaactgg acgatatgga aacctacctc cacgccgaca
    19621 aagaccatat cgcgctcagc cgtttcaagt cagggcttta cggcggccat accgaaggcg
    19681 gcatcagcat cgccaacacc cgtcccgcca cttaccgcct gcaacagaat gcaagcaaca
    19741 tccaaatcca accgctgctg caagacctgt tcggcttcca cagcttcagc ggcaacggcg
    19801 atgcggtcat cgacctgacc gcaagcggcg aaaaccgcaa acagcttatc cgctcgctgc
    19861 aaggcagcct gtcgctgaat atttccaacg gcgcgtggca cggcatcgat atggacagca
    19921 ttttaaaaaa cggcctttcc ggaaaaatct cgggcagcac acccttctac cgattcacgc
    19981 tcaacagcga aatttcagac ggcatcagcc gccacatcga taccgaactc ttctccgaca
    20041 gcctctatgt taccagcaac ggctatacca atctggatac gcaggaattg tctgaagatg
    20101 tccttatccg caacgccgtc catccgaaaa acaaaccgat tcccctgaaa atcaccggta
    20161 cggtggacaa gccgtccatt accgtcgatt acggcaggct gaccggcggc atcaattcgc
    20221 gcaaagagaa acagaaaatc ctcgaagaca ccctgctgga acaatggcag tggctcaaac
    20281 ctaaagaacc gtaaataccc tgcgtacaaa aatgccgtct gaaacacatt aatcttcaga
    20341 cggcatgacc gtaaaaccta caaccccaat ttcccccaaa tcccatcaat tttaaccgta
    20401 accgcagggt cttttttgat tacccgtccc cattcgcggt cggtttctcc cggccatttg
    20461 ctggtcgcat ccaaacccat tttgccgccg agtccgctga cggggctggc gaagtcgagg
    20521 tagtcgatgg gcgtgttttc caccaaaacg gtgtcgcgga cggggtccat gcgcgtggtt
    20581 accgcccaga tgacttcttt ccagtcgcgc acgtttacat cgtcatccac cacgatgatg
    20641 aatttggtgt acataaactg gcgcaggaac gaccagcagc ccgtcatcac gcgcttggcg
    20701 tgtccggcgt actgtttttt catgctgacc accgccatgc ggtaggaaca gccttcgggc
    20761 ggcaggtaga aatcggtgat ttcggagaac tgcttttgca aaagcggtac gaacacttcg
    20821 ttcaacgcca cgcccaaaac ggcaggttcg tcgggcggtt tgcctgtgta ggtagagtgg
    20881 taaatcgggt tttcgcgcat ggtgatgcgt tcgaccgtaa acacagggaa atggccctgc
    20941 tcgttgtaat agcccgtgtg gtcgccgtat gggccttcca acgcggtttc gtttggatga
    21001 atcacgcctt ccaatacaat ttcagcacgg gcaggcactt gcaaatcgct gccgatacat
    21061 ttcaccagct ccgtccgcga accgcgcagc agtccggcaa actggtattc gctcaaagta
    21121 tcgggaacgg gcgttaccgc gcccaaaatg gtggaggggt cgcaaccgag tacgacggcg
    21181 acgggatacg gcgtatcggg attgagtttg cggaattcct gataatccaa cgcgccgccg
    21241 cgatgcgaca gccagcgcat aaccagcttg tttttgccga tgagttgttg gcggtaaatg
    21301 ccgagatttt ggcgtttttt gtgcggcccg cgcgtgacgg tcaagcccca cgttaccagc
    21361 ggcgcaacgt cttccggcca gcaatgttga atcggaagct gatacaaatc aacgtcttct
    21421 ccttcccaca cgatttcctg acacggcgcg tttttcacca cgttcggcgc catgctccaa
    21481 atatctttca acagcggcag tttggaaaac gcgtctttga tgcctttggg cggttcgggt
    21541 tctttcaaat acgccagcgt ctgcccgatt tcgcgcagct tggacacgct gtccgcgccc
    21601 atgcccatcg ccacacgttc gggggtgccg aacaggttcg ccaacacggg ataatcatag
    21661 cgcgtaccgt cgggcttaat cgggttttca aacaacaacg ccggcccttc ggcgcgcaac
    21721 acgcggtcgg caatttcggt catttccaaa tgcggggaaa cggggtgggc gacgcgcttg
    21781 agcttgccct gctgctcgag catagcgatg aagtcgcgca ggtctttgta tttcatgttt
    21841 atcctttttg tccttttatc ctgaacaatc cgattcggat accgccccta tccttgcctg
    21901 cgcttcggca tatcccatgc cgtgataaaa gtcgcgtacc ggcggatgtc cgccgctttg
    21961 atgaagttgc agcaaagggc gttggttgtc ggactgggta acgacattgc agtgcagacc
    22021 gaaggtgtcg gtttcataag ggggcagccg attgcaaatc ataccgaaat aaacggcgtt
    22081 ttcagggttg tcgtaaaagc ggctttgata gtcgttaaaa ctcttttcgc tgacggacac
    22141 ccacacgccg tattccagcg tttcctgatg cccgataatc ggaataggca gcgccgcgcg
    22201 gataaagcgg tcggtttggc cggaatagcg gatgatgcag aaatcagaat cgcattccgc
    22261 ttgataagca atgcgttctt cttcactgag ttgattatag ggataggggg cggtaaagcc
    22321 ggttgcgggc atatcttcat gtttttcgcc gcaggaagtg caagtgtgca taaggtttca
    22381 gactttcaac acaagtttgc ggtaaagcca ttcgccggca aacagcatcc ccatcaatac
    22441 ataggcaatc acgcctgtat aaaccgccca ccaatcatat cgccccaacc gggccaacaa
    22501 agcggcaagc gtcccgttgg caataaagaa tacgcaccaa acctgcgtta cccggcgggt
    22561 atagcgcacg gctttttcag gcaggtcggg ctgttgcagc cgcgcaagtt tttcaatcac
    22621 cgtctgcccg gcaaacaggc tgctgccgaa caccgccaac atcatcaaat taacgaggac
    22681 aggataccaa tacattgaat cacgccgccc gaacaccaac tactgcggca aaaaacagtg
    22741 ta
//
LOCUS       DAWXHA010000017        22682 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.017, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000017 DAWXHA010000000
VERSION     DAWXHA010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22682
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.017"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            124..474
                     /locus_tag="AABD07_000535"
     CDS             124..474
                     /locus_tag="AABD07_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355122.1"
                     /translation="MKTKSKKLLRLVILFVAAFSISTPAVMYFSTGEATLNLFVEGFW
                     IIGLLQALAFTTIVDYCTESKHTNMLNNPACNDEDWDNDMLNNPACNDEDWDNDMLNN
                     PAYSWSMFNIHHSN"
     gene            678..1256
                     /locus_tag="AABD07_000536"
     CDS             678..1256
                     /locus_tag="AABD07_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HFB2355123.1"
                     /translation="MIGFVKWYSYEKDFGFIFGEDGHEYFFRKSAGSDIPGQIVNFEP
                     FEHSRGLRARKVSNIHNPDPQQIQKLKTLCKDFQKVEKQPMSKKYNLLSAAILSLCLT
                     MFITLGFFYILAGFFDTDRETNIVLLFVFPSVTFSVLTFFLNKLFRNMKPGSDADVVT
                     NNDWLNDFWEDRRRHCPSYSHHPSNIWHLSED"
     gene            complement(1540..1983)
                     /locus_tag="AABD07_000537"
     CDS             complement(1540..1983)
                     /locus_tag="AABD07_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HFB2355124.1"
                     /translation="MGPLLPGAHTIISPFGKRVHPILKKVINHKGEDYRGSINTPLLA
                     PFSGRVVESRYQANTVNGKTVGWGHTVVIEAPNGVRYRASHMNGASPLRFGETVSKGQ
                     QIGNLGASGGVTGPHLDAMLYSPSGKILPVSAYRGKTLNEIGKIK"
     gene            complement(2046..4955)
                     /locus_tag="AABD07_000538"
     CDS             complement(2046..4955)
                     /locus_tag="AABD07_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG"
                     /protein_id="HFB2355125.1"
                     /translation="MAVEYFTFPGNGEAVRAVFNGVATISGSTMMGGAMQAAALFGFL
                     VTLAVAVFKLDLKDNFSYLFVVLFCWMGMMVPKTTVLITESGGYGYTGRQYTVGNVPV
                     GLAYMGYFVSSFGQSITRKAEQVNHLPDDLNYSRTGMLFGTRLMENIREARIPDAQLT
                     QDWALFMHQCSFFDMNLYHFYNVQDLAQSADILATLTHTNQALFTNVSQIASRRGNML
                     QYNGKSKTMTCNEAAKELKDRTRFYSKNYLPGYIADRVFAGLGTNSAGINRVNALVTL
                     GNSSFQYLLDNARFDTLKNIEQAAMVEIIRQAGIINGQRNRNPAAVQQAFAQVQARNQ
                     YIAAQKTGSSMASWNLPLIRSAAEAILIGLFPFVMILAMLGGIMAFRLLSFYMMSMLW
                     IQLWAPVASIINMIMTMNAKRLFSVEAANGVITPGTGDTLLMAAADAQAAAGAAMWLI
                     PVIAGALAMGGRSLMNGMMGMTSSAKSTGEAAGSQVGSGNYSAGNMNYNNSNANKHSL
                     NPVYTDPQMMTAQSAAGTSWRNMATGENRYQARGDSFGNVSSTSTVSMSDVYTQAADR
                     SITAAKQYAASSVEQTTLGNTQTLAFGIQTVGQNGANYAVTNGMSSSTAKALDQILQS
                     SKDIAQRNGMGNDVQTVSSIALDLGAQLAGGVTAGSKGAGPQASATVSGGASIRGEGK
                     SSNKLSHDISETAKALESQGVSITRSMLENIGQSNAFTQALTDSSSLASQAQASYNKA
                     HQASISEQQSYNEAQNYREAASRTAQSGATVSIDNAKAIREYADQNGLAYSQVYNNPS
                     IVAAAAMNAAVTQASNLRQQAEGTRFDSTGPISPDDRPTNNVAAAYSSYKSGIDGQKS
                     STFATIQAQADGNGVNRNEARANIDGWQQKLEQGSKDAKNFNQKLFDKGMKKQEENTN
                     KLHAQGEDTFKHVNTFVMGATQTFSSDKAYVQAQNKYGKTEGRPGSGSRNYRPKK"
     gene            complement(4965..6476)
                     /locus_tag="AABD07_000539"
     CDS             complement(4965..6476)
                     /locus_tag="AABD07_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraH"
                     /protein_id="HFB2355126.1"
                     /translation="MKFHIFRFPKPAKVSAVCASSAKYLCLAASLALPINSSAGIEKN
                     MADMFNSMGAEANYTEAGAFHGQSGSLYTGGGMSVRFPVSDISLGNIQLPSISAGCGG
                     IDFFAGSFSFVNKEQFIQFTRNLGNNAAGVAFDLALKALDPMIQDAIGGIRDLVNYVN
                     QNSLNSCKLSQDIVGGAMGKLGSLASSNCRAASVDSGSSNDPAEGTWYCQAAKNLVHE
                     ADKVRNTGKPQDTISFTGGNLTYEAMKNYTGQRSKLGIDMDFYYSMLGTIVFTPLTQH
                     EGDKDKYTVGIQSFEPKILSIQDLLNGKNNAGGEIREKVVLDMWTCKDGSKKLMENCT
                     EKNDVEIPSLRYMVHKRIETLPTAIRNNQGWNLSTRKQIAAIVNNSKLPILKMAVSDA
                     FLGTGYLKKTAVLDAIAVDIMANILDQSERQVRSTLGMYNKTDDASGEAVRKLFANLG
                     ELRSRIYQERIDSMKKIEIEESMMRAMEQFETQWRSAFVDTNNSMTFDSMNRF"
     gene            complement(6648..7439)
                     /locus_tag="AABD07_000540"
     CDS             complement(6648..7439)
                     /locus_tag="AABD07_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HFB2355127.1"
                     /translation="MKRVRMAVMLIFSLHASNLRAADDGMGWYDQDIWKNENRAFLWY
                     PDAKKPKQAGQNRPQNTPVRNELAEFEMLQRNLDESRKIAVMNPTPQNLKRYIELQEV
                     VMNKSAAFADQWQRVIWQNPNLDYSQRGRPNNQLAQQQYDHNRQQQKAGAIRKLAGEN
                     GIMFVFKSDCPYCHTMAPILKNFADQYGIKVMPVSLDGGGINHFPRALPNNGIAQRLN
                     ITTVPAMYVMDTKTKQFTPIGFGVMAQTTLEDRFLAYSRPVGTLY"
     gene            complement(7436..7861)
                     /locus_tag="AABD07_000541"
     CDS             complement(7436..7861)
                     /locus_tag="AABD07_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355128.1"
                     /translation="MNINNWLAASAGIVSGMFFTGMALAASLPYTGGIALEKTEALAR
                     TSIPLPDGKPDALLALAMRHGSAKGYFSGRAAAAVKQKFRQDIPIFVEAVRMEEIKNK
                     PGCNRVRLTFHTSPALSQTFPSEIMDIGACPNRKNGGKK"
     gene            complement(7848..9431)
                     /locus_tag="AABD07_000542"
     CDS             complement(7848..9431)
                     /locus_tag="AABD07_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
                     /protein_id="HFB2355129.1"
                     /translation="MRAITSLLVMICHFMLITSASAAALRESAACTRTSSVCVDGPST
                     KNINGVDVTKDCWEYKEEYQCLEKDSADYCAPLKDPSAKCEVQGQTCLEQSNEGECLR
                     YTHKYSCDVDLRTLHQGRLPTKVEEMEHTHLISSQWDESSCQVQGKKCKAVATECLEP
                     GSTKTINGVPVTRDCWKERRTVQCTDGSDSETCSAYTSSDQCRLIGDKCTHQLPDGTC
                     QAREKQFECTEKGETTKEVSGCQDRDFAKTMTTMEFARETQRFYDPEKQRFFNGEAGQ
                     CSIKLDGALDSVFGGDCCRTKADPGKFVDFAVQTGTTMATTYFMASVASHYTFTTMFV
                     SSAAQAMGTALSAAGGITGTSQIGALGFSAAGQQGMGVIVGFNPAVFAAAIAVIAIQQ
                     WLKCPQSEILVAMKRKADLCHYVGSYCGSKILGACVTMIESQCCFISKLAKIVNVGGK
                     EQLKRGWGTPENPKCEGFTAQELEQLDFSKLDLSGFYEEIYANMDNVAKQGQKVSQKI
                     REASVNGKNLEVKNYYEYQ"
     gene            complement(9428..10672)
                     /locus_tag="AABD07_000543"
     CDS             complement(9428..10672)
                     /locus_tag="AABD07_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355130.1"
                     /translation="MKRHAIYLTVFGLMQTAFAADYGSYVGELGKLGAGTATNMMQPA
                     QYTPRYTDNVPMAEQYYGGGVSLPTQFGDAKFNDCKNLPANPDLYLRQECEGVNLIAG
                     SRTKRPDVTISSNEKLVKGTQKIAGDPAETLEKYKWKYPVNEDGSVGTVPSSACPTET
                     ITVPAVKTVKRCNEYHGAEMFLCEAALKVNVDPGWNYSCLESKYRNQQYQCGKKLKVV
                     CEKSGPNCTRSGIEAGSLQGDMTVRLTASGSAHRLMFGTIGDNYWRDGQYDREMTLNV
                     KNPEKLTLFTLSRVEYDDWLIVKVNGKIVYSSYNNQMFAADYTAKDEDGFPIGRRFAP
                     VRNEEGTLLGSAERGESWRKNLNIDIRPYLHQGKNTIWTRTVVGGGGENAIFFNVHQY
                     CEPVCHDKWENSCSEYEKRVKQ"
     gene            complement(10669..11421)
                     /gene="trbC"
                     /locus_tag="AABD07_000544"
     CDS             complement(10669..11421)
                     /gene="trbC"
                     /locus_tag="AABD07_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TrbC"
                     /protein_id="HFB2355131.1"
                     /translation="MDKSLRNVIVAGGVFLILLGGLAGVGSAYADADVEAARNRLRTT
                     MGKVTRVKNPNVGDNRQQPEIPDLKGIKHRVPDVRDYGNAKIKADPMSIAQKYRTASQ
                     EARQAAEKADLMVFVSFSMPEASLKRIARETAKAGGVMVIRGFKDDSLKATVKAAEEL
                     AALQGDMLIHPELFDHYGITEVPVTVIARNSEDGLDGCAVNSELGMCTEHVAVKGDVS
                     LHSALEHLIRESEDKKLSDIANAKLAVLEGRK"
     gene            complement(11436..12554)
                     /locus_tag="AABD07_000545"
     CDS             complement(11436..12554)
                     /locus_tag="AABD07_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HFB2355132.1"
                     /translation="MKIFVTPLKLLIPLLLLPLFSISHAAEAVPTAPIPNKLTCQGKM
                     LNPINDICWSCMFPIKIGGKINLNMDNQEDNGSSPNNWFCSCTHPSRSGVTVSFWEPT
                     HLVEVVRTPFCMVSLGGISLKNQKADTAETTGKADVSNKIQNLFGGSHKRGRNEQHDQ
                     HNAFYQVHWYKNPVVFWLEALLDNDCMEKGTLDIGWMTELDPTWKYPSLAVYQAPDSA
                     LFANVVAQAACAADCVKAAAGFPFNKLYWCAGCHGTIYPLSGWMSGHFSEVQAAKLMA
                     ARIQTKMHRDLVAWRTSGRDALCGYKLNPVMDKQNYKMAMTYPVAARKFRGRCCEPIG
                     RSTLVRDSGKAFPYKGNQFAFQLFRKRDCCGAYKFKTN"
     gene            complement(12551..13207)
                     /locus_tag="AABD07_000546"
     CDS             complement(12551..13207)
                     /locus_tag="AABD07_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraW"
                     /protein_id="HFB2355133.1"
                     /translation="MSHKKKIASVASLVILATGISSWVAASTPPVEKVGDKIGTTYPI
                     AEKHAIREIEARLKAKQDSGQLAAMQKEVQDRINRSALNLQPLEGLAKATKGSVRYFD
                     PSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPFKMFFFDGREPDQIELAKKLAAEYG
                     ESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQLNEVPSLVSQEGGRLRVEVMKP
                     "
     gene            complement(13216..13761)
                     /locus_tag="AABD07_000547"
     CDS             complement(13216..13761)
                     /locus_tag="AABD07_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbI"
                     /protein_id="HFB2355134.1"
                     /translation="MFEAMIKISQKESNKAVMKRLYREFCQKYATPFLAVAVCLSAFN
                     QHYALAFNLSRSLPHHLYFIKKDANKLSDLKQGDYVAFAWQGGFYPIGTQVVKEVAGL
                     PGNHVTKANRTFFIDGKEVGTAKEYSLDGMKLAINPFEGEIPQRFMWVKTGHKDSLDS
                     RYELSGLIHSGQIIGKAVPIF"
     gene            complement(13761..14309)
                     /locus_tag="AABD07_000548"
     CDS             complement(13761..14309)
                     /locus_tag="AABD07_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355135.1"
                     /translation="MTEAKEKKENTANTAPEKNPEDNGVEVSLGSLVIGAISIAALAL
                     GVWNFMKTHEKPVHIVDLAGISMTYREQAKNQGLQNGISDRQRAAILQNYQAKMNTLQ
                     QVIEEKVIRCGCNIFVKSALVGRNTEVVDVTADIMKELDKRVPATAVVAAPVHQQVEK
                     TIPKPMAEEGKGTPVTEEEMDR"
     gene            complement(14337..16913)
                     /gene="traC"
                     /locus_tag="AABD07_000549"
     CDS             complement(14337..16913)
                     /gene="traC"
                     /locus_tag="AABD07_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein TraC"
                     /protein_id="HFB2355136.1"
                     /translation="MGVLSKFKNWLAGSDDVDQPMEALHNNPVDPDFDHLSDYLNYGA
                     YDTKTELFTLMSVKGDKPLGMGFILELNPFLGGSDDLIGKWGSLYALLPEKTPIQVQI
                     FGSPDLRNYFKEYEQVQASRPIDDPMRSTFETLAKKRTEFWNKGTQKVLVENTAIRLR
                     NLRCILSVNLNIPPDNAVEVSKAVSLLARMRDSLRSMQIYGRTWNADDLLAWTTLLLN
                     PNRMFTGQQDEIDPVWDETKFLSEQMIETRTSIKVLDSGSGLRFGNRAAGDCVIAQCY
                     SANRYPEEFHLSNMGALIGDVIEANMNYTSPFLISMAMFKRDYDTSSNTVKLKAARAK
                     QTAESKMAAVMPEAAKIKRDYDICLEAFGKGGGGLVSLLHQVVIWERPENINLAESQA
                     VSIWQAQGFGLYRDQYLQLGSYLTALPMAIDKEVEKYLDSKKRWSTKTMTNAVCMSPV
                     IGEWHGLGRPVIGLFGKRGQAMGIDLFANPAGNYNFAIIGASGSGKSFFANEIVRNYM
                     GLGTQVWIIDVGRSYEKFCQMIGGQYIEFTYEAGLCFPPFQMVTDINEDIEMLKLIFS
                     LMASPSDSLTEQQEAKLQRIIEEVWYEFGQEGTVDHVRERCLKCLITGSNEGGKPGER
                     DLSMVAVADQLYTYCSEGIYGSYFNGKLNVEFKNDLVVLELEELKTKPDLQQIIMQLI
                     MYRIMQGMYLSRSQYKIMMIDEAWALLGDTGTAARFIEEGYRRVRKYKGACGTLTQGA
                     NDYYKTKAAEAALENADFVFQLRTGAKSLKTIQDKEPFEVNDGIMQILRTLSKTDYYS
                     EIFVSTPIGYGVGRLYSDPFNVLASSSKAEDVEAVNHYRNQGLNTAEAIEAVLRDRAA
                     TR"
     gene            complement(16923..17504)
                     /locus_tag="AABD07_000550"
     CDS             complement(16923..17504)
                     /locus_tag="AABD07_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraV family lipoprotein"
                     /protein_id="HFB2355137.1"
                     /translation="MMRLKALSITAAILILSGCSTLTMSGIGGSEKFRCPNARNSDDP
                     YCESISSNYKASVAGVLKDGMKRQVGQPYTDQSVRTLMLTQAYSSGTPVRSQSEIARI
                     WVAPYLDTDGDLNDQSFTYVVLNQGDWLIAHNGQQIINEYRPIRLLGDGAKTSGSSVE
                     TSPTNSNNTNDRIPDVGVNLHLQETSGIPGTVR"
     gene            complement(17501..18220)
                     /locus_tag="AABD07_000551"
     CDS             complement(17501..18220)
                     /locus_tag="AABD07_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HFB2355138.1"
                     /translation="MKKKILATIAAITAFQTAFADVKTVGSTLHKLYPNTTFSSVKAT
                     PMASIYEVTMGDNIAYVQENGRYFIFGALYDMQEQKDLTEMARSAVTQKSYSRLPFKN
                     AIKIVKGNGGKGKREFALFSDPDCPFCRRLEETLAGMTDYTAYVFMFPIKSLHPDAIS
                     KAEHIWCSKDREKAWNNYMLMDKEPAAGNCKNPVSENIALAEQLKVRGTPSMIHKDGR
                     RTSGAMPRAELEKWLNGAGAE"
     gene            complement(18230..19543)
                     /locus_tag="AABD07_000552"
     CDS             complement(18230..19543)
                     /locus_tag="AABD07_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraB"
                     /protein_id="HFB2355139.1"
                     /translation="MRVKVNKFKLSAARKRQLAIAGMVAGSMAAIVGSAIYVIEGNKK
                     KSAEVTQVQNKRQILRTDFTSPQAGITDNSLWMNTESSKIEYANRKISELETMVQELK
                     EKENSSNPDTSKGLGPDGLGKPPAISGIGDNGRLPPAPPAGTLPNGAPPADRSIERKI
                     VSGSMSEAELQPGTTGSVNTGNPNENVRVSPQLKEAEWVKSKTPRMNIEVVEDGGKVV
                     VSQGKFRARDSYIPSGTFFRSVLLGGVDAPTGGEAQNASPHPVLMRVTDFAQLPNRFK
                     YNFRECFVTGQAYGDISSERAYIRLQNLSCVGTDGRAIDMPVKGYVAGEDGKTGVRGN
                     LVTKQGQLLANALMSGVISGMGKGVSEAFKVTNNTAFGSTTSIRGSDQYRAGIASGIG
                     GAADRLAEYYIKLADKVFPVVEVNAGRQVDVVLTQGIEIDTGETK"
     gene            complement(19545..20279)
                     /locus_tag="AABD07_000553"
     CDS             complement(19545..20279)
                     /locus_tag="AABD07_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system secretin
                     TraK"
                     /protein_id="HFB2355140.1"
                     /translation="MCSLLKKIVFSALLAAGPATSFAAQRVPATENTPHVVSISKRNL
                     SRIAIEGGRISSWKFMEGDLELQKDTTTGQLFVRSLTSNPTNLFVISEEGKTYLLVLK
                     PTSKQGDNIVIDVAGANRREAAVLASQTGPMPVTMNSTEYVRAIKKMMASMMRGTTGD
                     MGINHSHEYQTVPLWKDTLFIQNGSYTAADMQGLSFTLTNLGTKQLEIREQEFYRQGV
                     LAVAVRKQILQPGEITDVFIISRPGG"
     gene            complement(20281..20931)
                     /locus_tag="AABD07_000554"
     CDS             complement(20281..20931)
                     /locus_tag="AABD07_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraE"
                     /protein_id="HFB2355141.1"
                     /translation="MLSELAIRTGIKVFFWILLGMSIAVNLFLSATLLFKGTIVQTTL
                     TPPEIRRSMTVSNIAFSKEYLEEMAPYAAYLLLNVTPKTVDYQNSQLLKIVSPDYKDA
                     LERELSLNALWVKKNNVGTTFSATEATADISDNTVSIRGVFEVKRNNALVEQKDRELL
                     ISFKNNYGTLQLLSIKEVQKRVTKAEPAGQEKSEVETEDVEISKTATEFKGGNRGN"
     gene            complement(20943..21224)
                     /gene="traL"
                     /locus_tag="AABD07_000555"
     CDS             complement(20943..21224)
                     /gene="traL"
                     /locus_tag="AABD07_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraL"
                     /protein_id="HFB2355142.1"
                     /translation="MRDYHVPVSIDDPKKAFIWDLDVFILFMSGFGIGIVSRHFFISM
                     SISLFIAWRWGKLKSGKHQWFFLHVLYWYLPINEKNKRIPETNKREFLN"
     gene            complement(21246..21542)
                     /locus_tag="AABD07_000556"
     CDS             complement(21246..21542)
                     /locus_tag="AABD07_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraA"
                     /protein_id="HFB2355143.1"
                     /translation="MNIKRNKLVKSASAVALALYANLAMAATTGAEFKGLADMVTGWS
                     EGYLGMALGLTAFLIGLAVGLMKQTIMPCIVGLGVGLAATLGPGIIKGMFTLII"
     gene            complement(21598..22119)
                     /locus_tag="AABD07_000557"
     CDS             complement(21598..22119)
                     /locus_tag="AABD07_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HFB2355144.1"
                     /translation="METIKNTLFVASAMILTACAAPKQEVAGLPQDATYTVEQNQLGE
                     FVFCRNEECSGFERKVLAEQPVYAQTQTNLQKDEIRVFFNLGSSHLGAEGVRTLKRVL
                     PKLKNTQTVYLRGWADSIGGRNTAINRRLAKQRAAVIGKWLRKHNVSAKIRTASSPAC
                     CNSDDTRTVVITW"
     gene            complement(22089..22550)
                     /locus_tag="AABD07_000558"
     CDS             complement(22089..22550)
                     /locus_tag="AABD07_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFB2355145.1"
                     /translation="MRLRAILLQFVVPGVLVLTSARAVAFCYKEAGSKYGIDPAMLQS
                     IALTESAFRPNIESHTADIGLMGINRSWLPVLHKKFGLTGADVWNPCTNVHIGAWILA
                     NSYRQHGKSWEAVGAYNAACTKLKGRACYRARMTYANKVYQNWKRLKTRSS"
BASE COUNT         5715 a         5514 c         4840 g         6613 t
ORIGIN      
        1 aacagaggca gcgaacgttg gattacaagt gacagcatcc aagtaactta taaataatgg
       61 gatgtgtatc atataagaaa gaggattggt agctgaaatg ctgccaatca catggagtgc
      121 aaattgaaaa caaaatctaa aaaacttttg aggcttgtta tcttatttgt agcggcattc
      181 tccatctcta cacctgcggt aatgtacttc agcacaggcg aagcgacatt aaatcttttt
      241 gttgaggggt tttggataat tggattactt caagcactcg cttttaccac cattgtagac
      301 tattgcactg aatctaaaca tacaaatatg ctcaataatc cagcgtgcaa cgatgaagat
      361 tgggataatg atatgctcaa taatccagcg tgcaacgatg aagattggga taatgatatg
      421 ctcaataatc cagcgtactc ttggtcaatg ttcaatattc accattcaaa ttaaaaaagc
      481 aggagcctta tactcctgct ttccgcagca aagttacgga tgtacaaccc ggtaaaaaaa
      541 tctccacttc ctatgggcct gccttggtct tagaaaaagg tgagaatggc ttaattaaaa
      601 ttcagccaag cagaggcaat gaacgttgga ttacaaatga tagcattcaa gtaacctata
      661 aataaaggag aagtatcatg atcggattcg taaaatggta cagctatgag aaagattttg
      721 gctttatctt tggtgaagat ggtcatgaat actttttccg taaatccgcc ggttcagata
      781 taccaggaca gatagtgaat ttcgaaccat ttgagcatag tcgtgggctg cgagcgcgaa
      841 aggttagtaa tatacataat cctgatcctc aacagatcca aaaattgaaa accttatgca
      901 aagactttca gaaagttgaa aagcaaccca tgtctaaaaa atacaacttg ctttcggcag
      961 ctatattatc gctgtgtttg actatgttca taacactggg ctttttctac atcttagccg
     1021 gcttttttga tactgatagg gagactaaca tagttttgct gtttgtcttc ccttcggtaa
     1081 ctttttccgt gctgacattc tttctgaata agttattcag gaatatgaaa ccggggtctg
     1141 atgctgatgt tgtcaccaat aatgattggt taaacgattt ctgggaggat aggcgtcggc
     1201 actgtccttc ctattcacat catccgagca atatttggca tttatctgag gattgattaa
     1261 tttataaccc agctttttcc aatctcaatt gcaatatatt tcatcgatca aatgacgatt
     1321 aataaaaaaa acaggcagtt aaaagaactg cctgtttttt taatcgtctc ctagaacccc
     1381 ctcaattgct tcaagggttt tataaaacac agtctttgcc tcgtctgact gcaattctgt
     1441 accgccactg aaacttaacc gtacattgca gtcatccaaa gtcgaagatt cttcaatttc
     1501 aatgacaata tgggcaatgc tcatgatatg tacccctctc tatttgattt taccgatttc
     1561 atttaaagtt tttccgcgat aggcactcac aggtaaaatt ttacccgatg gagagtacag
     1621 catggcatca agatgcggac ctgttactcc gccactggct ccaagatttc cgatttgctg
     1681 ccctttactt actgtttcac caaaacgcag cgggctggca ccattcatgt gagaagcccg
     1741 ataccttacg ccatttggcg cttcaattac gacagtgtgt ccccagccga cggttttacc
     1801 gttgactgta ttcgcttgat agcgactttc cactactcta ccgctaaacg gtgccagcaa
     1861 tggcgtattg atagagccac gatagtcttc gcctttatga tttatgactt tcttcaaaat
     1921 agggtgaacc cgttttccaa atgggctgat gatagtatgt gcgcccggta atagtggacc
     1981 caaagtttca tttcctgagc catatgactt tgccccattg ccgcgatagc cgataccggg
     2041 cggggctact tctttgggcg atagttacga gaaccacttc ccggtcgccc ttcagtcttg
     2101 ccatatttat tttgcgcttg gacatatgct ttatcggaag agaaagtttg tgtagcaccc
     2161 ataacaaaag tgtttacatg tttgaaggtg tcttctcctt gagcatgcag tttgtttgta
     2221 ttttcttctt gttttttcat acctttgtca aaaagcttct gattaaagtt cttcgcatct
     2281 ttgcttccct gttctagttt ttgttgccaa ccgtcaatat ttgctcgggc ttcatttcta
     2341 ttaacgccat ttccgtcagc ttgagcctgg atagtggcaa aagtgctaga tttttggccg
     2401 tctatcccag acttataact actataagca gcagccacat tattagtggg gcgatcatcg
     2461 ggactaatcg gtcctgtact gtcaaaacgg gtaccttcag cttgctgtct taaatttgaa
     2521 gcttgagtaa ctgctgcatt cattgccgca gctgctacaa tagacggatt attgtacacc
     2581 tggctgtagg ctagaccgtt ctgatcagca tattctcgaa ttgcttttgc gttatcaata
     2641 ctaacagtcg caccggattg tgccgtacgg gaagcagctt cgcgatagtt ttgagcctcg
     2701 ttatagcttt gttgttcgct gatactggcc tgatgtgctt tgttatagct ggcttgagct
     2761 tgagaagcaa ggctgctact gtcagttaga gcttgagtaa acgcattact ttgaccaata
     2821 ttttcaagca tgcttcttgt aatgctgaca ccctgggatt caagggcttt ggctgtttcg
     2881 ctaatatcat gtgatagttt gtttgaagat ttaccttcac ccctaataga tgctcctcca
     2941 cttactgtag cactagcctg tggcccggct cccttagatc cagctgtcac accacctgcc
     3001 aattgggctc ccaaatcaag cgcaatagag ctgactgtct gtacatcgtt gcccataccg
     3061 tttctttgag caatatcttt tgaagattgc aaaatttgat ccaaagcttt agcggtagaa
     3121 ctactcatgc cattggtaac tgcataattc gcaccgtttt gaccgacagt ttgtatgccg
     3181 aaagccaaag tttgcgtatt acccaatgta gtttgttcaa ctgaagacgc agcatactgt
     3241 ttggctgccg ttatgcttcg gtcggctgct tgagtgtaaa catcagacat actgacagta
     3301 gaggtagatg agacattgcc aaagctgtcc ccccttgcct gatagcgatt ttcaccagtt
     3361 gccatattcc gccatgatgt tccggctgca gattgagcag tcatcatttg aggatcggta
     3421 tatacagggt ttaagctatg tttgttggca ttgctattgt tgtagttcat attgccggca
     3481 gagtaattcc ccgaccctac ttgggaaccc gctgcttcac cggttgattt ggccgatgaa
     3541 gtcatgccca tcatgccgtt catcaggctg cgtccgccca tggcaagagc acccgcgatg
     3601 accggaatca gccacattgc agccccagca gctgcttgtg catcggctgc tgccatcaat
     3661 aacgtatcac ctgttcccgg tgtaataacg ccgttggcgg cttccacgct aaacagacgc
     3721 ttcgcattca tagtcataat catattgatg atactggcta cgggtgccca aagctgaatc
     3781 catagcatac tcatcatgta gaagcttaat aaccggaatg ccatgatgcc acccaacatg
     3841 gcgagaatca ttacaaaggg gaataaacca atcagaatgg cctcagcagc agaacgaatc
     3901 aagggaagat tccaacttgc cattgatgag ccggtttttt gggccgcaat atactgatta
     3961 cgagcttgaa cttgagcaaa tgcctgctgt acggcagccg gatttcggtt gcgttggcca
     4021 ttgataatgc ctgcttgacg aataatctca accatcgccg cctgttcgat atttttcaat
     4081 gtatcgaagc gggcattatc cagcagatat tggaatgagc tattgcctaa ggtaaccagg
     4141 gcatttaccc ggtttattcc tgccgaattt gtacccaaac ctgcaaaaac acgatcggca
     4201 atgtagccgg gcaagtaatt tttgctataa aaccgggtac ggtcttttag ttcttttgcc
     4261 gcctcattgc aggtcatggt ctttgatttg ccgttatact gcaacatgtt gcctcttctt
     4321 gaggcgatct gcgatacatt ggtaaacaag gcttggttgg tatgggtcaa tgtagccaga
     4381 atatcggcac tctgtgccag atcctgcacg ttatagaagt gatacaggtt catatcaaag
     4441 aatgaacact gatgcatgaa cagtgcccag tcttgagtca gttgcgcgtc cgggattcgt
     4501 gcttcacgga tattttccat caggcgcgtt ccgaacagca tgccggtgcg tgagtaattg
     4561 aggtcgtccg gcaggtggtt aacctgctcg gctttgcggg taatactttg gccaaaagaa
     4621 ctgacaaagt agcccatata agcaaggcct acgggtacat tgccgacagt atattgacgg
     4681 cctgtatatc catacccacc tgattcagta atgagtacag tggttttagg gaccatcata
     4741 cccatccaac aaaataacac gacaaacaaa taactgaagt tatccttcaa atccaatttg
     4801 aagactgcaa cagcaagagt gaccaggaat ccaaataagg cagcagcctg cattgcgcca
     4861 cccatcatcg tagatcctga tattgtggca acgccattga aaaccgcccg tacagcttct
     4921 ccgttaccag ggaaagtaaa gtattcgaca gccatcatct ctccttagaa acggttcatc
     4981 gaatcaaaag tcatggagtt gttggtatcc acaaaggctg agcgccattg tgtttcaaac
     5041 tgctccatag ccctcatcat gctttcttcg atctcgattt tcttcattga gtcaatgcgc
     5101 tcctggtaaa ttctgcttcg caattcgcca aggttggcaa acaattttcg aaccgcttcc
     5161 ccgctggcat cgtctgtctt gttatacata cccaaggtcg agcgtacctg gcgttccgat
     5221 tggtccaaaa tattggccat aatatcaacg gcaatcgcat ctagaaccgc tgtttttttc
     5281 agatagcccg tgccaagaaa tgcgtcggat acagccattt tcagtatggg caatttactg
     5341 ttattgacaa tggcagcaat ctgcttgcgc gtagataaat tccaaccttg gttattcctt
     5401 attgcagtcg gaagcgtttc aatgcgtttg tgaaccatgt accgcaaaga aggtatttct
     5461 acatcatttt tctcagtgca gttctccatt aatttcttag aaccgtcttt gcacgtccac
     5521 atatccaata caaccttctc ccggatttct cccccggcat tgttttttcc gtttaaaaga
     5581 tcttggatgc tgaggatttt tggttcgaaa ctttgaatac ctactgtgta tttgtcctta
     5641 tccccttcat gttgtgttaa tggagtgaac acaattgttc ccagcatgct gtaatagaag
     5701 tccatgtcga tacccagttt cgagcgttga cccgtatagt tcttcatggc ctcataagtc
     5761 aaattaccgc cggtaaagct aatcgtatct tggggttttc cggtgtttcg caccttatcg
     5821 gcttcatgaa caaggttttt agcggcctga cagtaccaag taccttctgc cgggtcattt
     5881 gacgaacccg aatcaactga tgcggcgcga caatttgaac tggccaacga acccagtttt
     5941 cccattgcgc cgccgacaat atcctgactc agtttgcaac tgtttaaact gttttgatta
     6001 acataattga ccaaatcacg aataccgcca attgcatctt ggatcatcgg atcaagggcc
     6061 ttaagtgcca ggtcaaaggc tacacctgct gcgttattgc ccaggtttcg cgtaaattgg
     6121 atgaattgtt ctttattgac aaacgagaaa gagccggcaa agaaatctat accgccgcaa
     6181 ccggcactga ttgaaggtaa ttgaatattc ccaaggctga tatccgacac cggaaagcga
     6241 acgctcatac cgcctcccgt atataggctg ccgctttgac cgtggaacgc acctgcttca
     6301 gtataattgg cttccgctcc cattgagtta aacatgtcag ccatgttctt ctctatgccg
     6361 gcactactat tgatcggaag ggccagcgat gccgccaagc atagatattt tgcagaggaa
     6421 gcacaaactg ccgacacttt ggccggcttc ggaaatcgaa agatgtgaaa tttcataacc
     6481 gctccatgaa gcggttatag cagggaaatc cttactataa ccaagataag ttacagtaaa
     6541 gacttgagat taagggaatc ttattttacc tgaaatatcc gcgttgtcaa ccggttaata
     6601 catagaaata taaatattga aggccccgta tagggccttt gatttgatta atacaatgtc
     6661 ccgacagggc gggaatacgc taagaaacga tcctcaagcg tggtttgcgc catcacccca
     6721 aatccaatgg gtgtaaattg cttggttttt gtatccatga cgtacattgc aggtacagta
     6781 gtaatattca acctttgggc aataccgttg ttcggcaaag cacgcgggaa gtgattaata
     6841 cctccgccat cgagactgac cggcataacc ttaataccgt attggtcggc aaagtttttc
     6901 aaaatcggcg ccatggtatg acagtaaggg caatccgatt tgaaaacaaa cataatgccg
     6961 ttctctccgg caagttttct aattgccccg gccttttgtt gctgacggtt atgatcatat
     7021 tgttgctggg ccagttggtt gttcggacga ccgcgctggc tgtaatccaa atttgggttt
     7081 tgccaaatta ccctttgcca ttgatcggca aatgccgcag atttgttcat cacaacctct
     7141 tgaagttcaa tatatcgctt caaattttga ggtgtgggat tcatgacggc aattttacgc
     7201 gactcatcca aatttctttg cagcatttca aattctgcaa gttcattacg aaccggagta
     7261 ttttgaggcc ggttttgtcc ggcttgtttg ggctttttag catccggata ccataagaaa
     7321 gcacggtttt cgtttttcca gatatcttgg tcataccatc ccatgccatc atccgcagct
     7381 cgcagattgg aggcgtgcag gctaaatatc agcatgacgg ccatccgcac tcttttcatt
     7441 ttttaccacc gttctttctg ttcgggcacg ccccgatatc cataatttca gacggaaagg
     7501 tttgcgacag tgcgggcgaa gtatggaatg tcaagcgaac cctgttgcat ccgggtttgt
     7561 ttttaatttc ttccattctg accgcctcga caaaaatagg tatgtcctgc cggaatttct
     7621 gtttgacggc agccgcagca cggccgctga aatacccttt tgccgaaccg tgacgcattg
     7681 ccagcgcaag cagggcatcc ggcttgccgt caggaagcgg gatggaagtc cttgctagag
     7741 cttctgtttt ttccaaagcg ataccgccgg tataaggaag ggatgcggca agtgccatac
     7801 ctgtaaaaaa catacccgat acaatacccg ccgacgcagc caaccaatta ttgatattca
     7861 taatagttct tcacttccaa atttttccca ttaacggatg cctccctgat tttttgtgaa
     7921 accttttgcc cctgcttggc cacgttgtcc atgttggcat agatttcttc ataaaacccg
     7981 gacagatcaa gtttggaaaa gtctaactgt tccaattcct gtgcggtaaa tccttcgcat
     8041 ttcgggttct ccggcgtacc ccaaccccgt ttcaattgct ctttgccgcc gacattgact
     8101 attttggcta atttggaaat gaaacagcac tggctctcta tcattgttac acatgccccc
     8161 aatattttgc tgccgcaata agaaccgaca taatggcaca aatctgcttt acgcttcatg
     8221 gcaactaaaa tttcactttg cgggcacttc aaccactgtt ggatggcgat tacggcaata
     8281 gcagccgcaa atacggccgg gttgaagccg acaattaccc ccataccctg ttgtcccgca
     8341 gcagagaaac ccaacgcacc aatctgagat gttccggtaa taccgccggc cgcactcagg
     8401 gccgtaccca ttgcctgtgc tgcggagctg acaaacatag tggtaaacgt ataatggctg
     8461 gcaacgctgg ccataaaata cgttgttgcc atagttgtcc ctgtctgtac cgcgaagtca
     8521 acaaatttgc ccggatctgc ttttgttcga cagcagtctc cgccgaatac gctgtctaaa
     8581 gcaccatcca gcttgataga gcattgcccg gcttctccat tgaaaaaacg ctgtttttcg
     8641 ggatcataaa accgttgcgt ctcacgggcg aattccatcg tcgtcatagt tttggcaaaa
     8701 tcccgatcct gacaaccgga tacctctttg gttgtctctc ctttttcggt acattcaaac
     8761 tgtttttctc tggcttgaca ggtaccgtcc ggcagctgat gcgtacactt gtccccaatc
     8821 agacggcatt ggtctgagga tgtataagcg ctgcatgttt cggaatcgct tccgtccgta
     8881 cattgcacgg tgcgcctttc tttccagcaa tcacgtgtaa cgggtacgcc gttgatggtc
     8941 ttggtactgc cgggttccaa acactctgtt gcaactgctt tacatttttt tccttgtacc
     9001 tgacatgacg actcatccca ttgcgaacta atcagatggg tatgctccat ttcttcgact
     9061 ttggtcggaa gccttccttg atgtaacgtt ctcaaatcca catcgcaaga atacttgtgc
     9121 gtgtaacgca aacactcccc ctcattcgac tgctccaaac aggtttgtcc ctgtacttca
     9181 cattttgccg aagggtcttt taacggtgcg caataatcgg cagaatcctt ctcaaggcac
     9241 tgatactctt ctttgtattc ccaacagtct ttagttacgt cgaccccgtt gatgtttttg
     9301 gtcgacggac catcaacaca aacggaagac gtccgggtac acgctgcact ttccctgagt
     9361 gcggcagcag acgctgaagt gattaacata aagtggcaga tcataaccag caaagacgtt
     9421 atagccctca ttgttttacc ctcttctcat actccgaaca actgttttcc catttatcgt
     9481 gacaaacggg ctcgcagtat tggtgtacat taaagaagat agcattttct ccgccgcctc
     9541 cgacaacggt gcgggtccaa atggtatttt tgccctgatg cagatacggc cgtatgtcga
     9601 tgttcaggtt tttcctccag gattcgcccc tttccgcgct acccagcaga gtaccttcct
     9661 cattacgtac cggtgcaaac cttcttccta taggaaatcc atcttcatct tttgcagtat
     9721 aatctgccgc aaacatctga ttgttatagc tgctgtacac aattttgccg ttgactttga
     9781 caatcagcca atcatcgtac tcaacccggc tcaaagtaaa cagcgtcagt ttttccggat
     9841 tttttacatt gagcgtcatc tcccgatcat attgcccgtc acgccaatag ttgtcgccaa
     9901 tagtaccgaa catcagcctg tgtgcgcttc ccgaagccgt cagcctgacc gtcatatcac
     9961 cctgcaggct gcctgcttct atacccgaac gggtacagtt tggtcctgat ttctcgcata
    10021 ccacctttaa tttcttgccg cattgatact gctggtttcg atatttgctc tccaggcagg
    10081 aatagttcca gccgggatcg acattgacct taagggccgc ctcgcacaag aacatctctg
    10141 cgccatggta ttcattgcaa cgtttgacgg tttttaccgc aggaacggta atggtttccg
    10201 taggacatgc cgacgaggga actgtgccga cgctgccgtc ttcattgacg ggatatttcc
    10261 atttgtattt ttccagtgtt tctgccggat cgcctgcaat tttctgcgtg cctttaacca
    10321 acttttcatt tgaagatatg gttacatcgg gccgcttggt acggcttcct gcaatcaggt
    10381 ttacaccttc gcattcttga cgaagataga gatccggatt ggcaggcaga tttttacagt
    10441 cgttgaattt ggcgtcacca aactgagtcg gaagagaaac tccgccaccg taatactgtt
    10501 cagccattgg tacgttgtct gtatatcttg gggtatattg ggcaggctgc atcatgtttg
    10561 ttgcagtccc ggcccccaat tttcccagtt cgccgacgta actaccgtaa tctgcagcaa
    10621 aggccgtctg catgaggcca aatacagtta gataaatggc atgtcttttc attttctgcc
    10681 ttccagaacg gctaatttcg catttgcaat atcggaaagt tttttgtctt cagactcacg
    10741 gatcaagtgt tccaaagccg aatgcaagga cacatcaccc tttacggcaa catgttccgt
    10801 acacatcccc aattctgaat ttacagcgca accgtctaaa ccatcttcgc tgtttcgggc
    10861 gattaccgta acagggactt cggtgatgcc gtaatggtcg aagagttcgg gatgaatcag
    10921 catatcgcct tgcaaagccg caagttcttc ggccgcctta accgtggctt tcagtgagtc
    10981 gtctttaaac ccgcggataa ccattacccc gcctgccttt gccgtttcac gggcaatgcg
    11041 tttcaagctg gcttcgggca ttgaaaatga tacgaatacc attaaatccg ctttttccgc
    11101 agcctgtcgg gcttcttgtg aagcagtgcg gtatttttgt gcgatagaca tcggatcagc
    11161 cttgattttt gcatttccgt aatcacgaac atcgggcaca cggtgcttga tacctttcaa
    11221 atccggaatt tcaggttgct gccgattgtc acccacattt gggtttttaa ctcgggtaac
    11281 tttacccatg gttgtacgca gacggtttcg cgccgcctct acatccgcat cggcgtaagc
    11341 actgcctact ccggccaaac cgcccaaaag aatgaggaag acgcctccgg ctacgatgac
    11401 attgcgtaaa gacttgtcca tcactccatc tcctgtcaat tagtcttaaa tttatatgca
    11461 ccgcagcagt cgcgcttacg gaaaagctgg aaagcaaact gattaccttt gtatggaaat
    11521 gctttgccgc tgtctctgac taatgttgag cgtccaatag gctcacagca acggcctctg
    11581 aattttcggg cggccaccgg ataggtcata gccattttat agttctgttt atccattacg
    11641 ggattaagtt tgtacccgca taaagcatcc ctgcctgatg tcctccaagc tactaagtcc
    11701 ctgtgcattt ttgtctgaat tctagccgcc atcaatttag cggcctgcac ttcggagaag
    11761 tggccggaca tccatcctga caaagggtaa atcgttccgt ggcaacctgc acaccaatac
    11821 aatttattga atggaaagcc ggcggccgct ttaacacagt cagccgcaca ggctgcttgt
    11881 gcaaccacat tggcaaagag cgcagaatca ggggcttgat aaacggccaa tgacggatat
    11941 ttccaagtgg gatcaagttc cgtcatccaa ccgatatcca aagtaccttt ttccatacaa
    12001 tcgttgtcca ataaggcttc caaccaaaat acgaccggat ttttatacca atgaacttga
    12061 taaaaggcat tatgctgatc atgttgttcg ttacgaccac gcttatgcga gccgccaaaa
    12121 agattttgaa tcttattgga tacgtctgct ttacctgttg tttccgccgt atctgctttt
    12181 tgatttttaa gtgaaatacc gcctaggcta accatacaga agggggtgcg tacgacttct
    12241 accaagtgtg tgggttccca aaatgatacc gtcacgcctg aacggctcgg gtgcgtacac
    12301 gaacaaaacc aattgtttgg agaagagccg ttatcctctt gattatccat attcagattg
    12361 attttgccgc cgattttgat tgggaacata cagctccaac aaatatcatt tatcggatta
    12421 agcatcttcc cctggcaggt taatttattc ggtatcggag cagtaggaac agcttcagcg
    12481 gcgtgagata tagaaaataa tgggagtagt aataacggaa tcagtaattt cagcggtgtg
    12541 acaaatattt tcacggtttc atgacctcta cacggagccg gcccccttct tgggagacca
    12601 aacttggaac ttcattcagc tgaaaacttt tggacatccg cccttcttgg tcgtaataaa
    12661 ccgcctgatc catttctact gataactcat accaattgcc tgcagtcaga ataggcatga
    12721 atgattcgcc atattctgct gcaagtttct tggccagttc gatttggtca ggttcccggc
    12781 cgtcaaagaa aaacattttg aatgggattg gggctgcttc caaaggtttg acaacagtac
    12841 cggcaggagc aataatttga ccgtcttggt cataaattgt ttcggttaag gtataacttg
    12901 ggtcgaagta tcgaacagag cctttagttg ccttcgccag tccttccaag ggctgtagat
    12961 ttaaggcgga gcgatttatt ctatcttgga cctctttctg cattgccgcc aattggccgc
    13021 tgtcttgttt agctttcaaa cgcgcttcaa tttcgcggat tgcatgtttt tccgctattg
    13081 ggtatgtggt gccgattttg tcgccaacct tctcgacagg gggtgtcgaa gcggctaccc
    13141 atgaggaaat tccggttgca agtattacta gcgatgcgac tgaagctatt tttttcttgt
    13201 gggacatact cactcctaaa aaatggggac cgccttacca ataatttgcc ctgaatggat
    13261 taagccggat aattcatatc gactgtccaa gctgtctttg tgccctgttt taacccacat
    13321 gaaccgttgt ggaatttccc cttcgaatgg gttgatggcc agcttcatgc catccaggga
    13381 gtattctttt gcagtaccta cctctttccc atctatgaaa aaagtacgat tcgccttcgt
    13441 tacatgattt ccgggaagtc cggcaacctc tttgacgacc tgcgtaccaa tagggtaaaa
    13501 accaccttgc catgcaaagg ccacataatc gccctgcttc agatcgctta gcttgttcgc
    13561 atcttttttg atgaagtaaa gatggtgagg caaggaacgg gaaagattaa atgccaaagc
    13621 ataatgttga ttgaatgccg acaagcagac cgcaactgct aaaaaagggg ttgcatattt
    13681 ctgacaaaac tccctataaa gacgtttcat cactgctttg ttgctttctt tttgtgatat
    13741 ttttatcatt gcctcaaaca ttaacgatcc atttcttctt cagtaaccgg ggtgccttta
    13801 ccctcttcgg ccatcggttt cggaattgtc ttttcaactt gttgatgtac cggtgccgcc
    13861 actacagctg tggccgggac acgcttatcc aactctttca taatgtcagc agtaacatca
    13921 accacctctg tgttccgtcc gaccaatgca gatttgacaa agatgttaca gccgcaccga
    13981 attacctttt cttcgataac ctgttgcaag gtattcatct ttgcttggta gttttggagg
    14041 atcgcggctc gttgccggtc ggaaattcca ttctgcagtc cttgattctt cgcctgttcc
    14101 cggtaagtca tggagatacc ggccaaatct acaatatgga ccggtttctc atgggttttc
    14161 atgaaattcc atacgcctaa tgccaatgcg gcaatagaaa ttgcgccgat cacaaggctg
    14221 cccaatgaaa cctctacgcc gttatcctcc ggattctttt ccggagcggt atttgccgtg
    14281 ttttctttct tttcttttgc ttcagtcatc ttattaatat cctatcctct gcctaattag
    14341 cgggttgcgg cacggtccct taaaactgct tcaatggcct cggctgtatt caatccctga
    14401 tttctgtaat ggttcacggc ttcaacgtct tccgcttttg agcttgaggc aagaacgttg
    14461 aatgggtccg agtacaacct acctactcca taacctatcg gggtagagac aaatatttca
    14521 ctgtagtagt cagttttgct caatgttcgc agaatctgca taatcccgtc attgacttca
    14581 aaaggttctt tgtcttgaat ggttttgagc gatttagccc cggtacgcaa ttggaaaaca
    14641 aagtcggcat tctctaatgc cgcctcagcc gccttagtct tgtagtagtc atttgcacct
    14701 tgcgtcagag tgccgcatgc acctttgtac ttacggacac ggcggtagcc ttcctcaata
    14761 aaacgagcgg ctgtacccgt gtcgcccaac aaagcccaag cctcgtcaat catcataatt
    14821 ttgtactggc ttcgtgatag gtacatgccc tgcataatgc ggtacataat cagctgcatg
    14881 atgatctgtt gcagatccgg tttggttttt aactcttcaa gttccagtac gaccaggtca
    14941 tttttaaact cgacattcaa ttttccattg aagtaactgc cgtagatacc ttccgaacag
    15001 tatgtgtaca attggtcggc aacggccacc atagacaaat ctcgttcacc gggctttcct
    15061 ccttcattac tgccggtaat caaacacttg agacagcgtt cccttacatg atcgaccgtg
    15121 ccttcttgtc cgaattcgta ccatacttct tcgattatcc gttgaagctt ggcttcctgc
    15181 tgttccgtta gggagtctga cggagaggcc atcaatgaga agattagttt caacatctca
    15241 atatcttcgt tgatgtccgt taccatttgg aatggcggga agcacaggcc tgcttcatag
    15301 gtaaattcaa tatactgccc gccaatcatt tggcagaatt tttcatacga acggccaacg
    15361 tcgataatcc atacctgagt ccccagcccc atgtagttgc gcacaatttc attggcaaaa
    15421 aatgatttgc cggaaccgga agcgccaata atggcaaagt tatagttacc tgccgggttg
    15481 gcaaataagt cgattcccat ggcctgaccg cgttttccga acaaaccgat gacaggtctt
    15541 cctaaaccgt gccactcgcc gataacggga gacatacaga cagcattagt catggttttg
    15601 gttgaccatc ttttcttact gtccaaatat ttctcaacct ctttgtcgat agccattggg
    15661 agggcagtca aatatgaccc cagttgaaga tattggtcac gataaagacc gaagccctga
    15721 gcctgccaaa tcgataccgc ctggctttca gccaagttaa tgttttcggg acgctcccaa
    15781 atgacaactt ggtgcaacaa actcaccaga ccgccgccgc ctttgccgaa cgcttctagg
    15841 catatgtcgt aatcacgttt gatttttgct gcctccggca taactgcggc catcttggat
    15901 tccgccgttt gtttggcgcg ggccgctttc agttttacgg tattgctgga agtgtcataa
    15961 tcacgcttga acatcgccat ggaaatcaga aatggtgatg tgtaattcat gtttgcctca
    16021 atgacatcac caatcaatgc gcccatattg gacagatgaa actcttcagg gtagcgattg
    16081 gcagaatagc attgagcaat cacgcaatcc cccgcggcac ggttgccaaa acgcagcccc
    16141 gagccgctat caagaacctt gatagatgtg cgggtctcaa tcatttgttc actcaagaac
    16201 ttggtttcat cccaaacagg atcgatttca tcttgttgtc cggtaaacat cctattaggg
    16261 ttgagtagga gcgttgtcca agccaataaa tcgtctgcat tccaagttcg gccgtaaatc
    16321 tgcatggagc ggagtgaatc gcgcatgcgg gcaaggagcg aaaccgcctt gctgacttcc
    16381 actgcattat caggtggaat attcaaattt acgctgagga tacagcgcag atttcgtaaa
    16441 cgaatggccg tattttctac caagaccttc tgtgtaccct tattccaaaa ttcagtacgt
    16501 tttttggcca aagtttcgaa agtgcttcgc atcggatcgt ctataggtcg tgatgcttgt
    16561 acttgctcat attccttgaa gtaatttctt aaatcggggg agccgaaaat ttgaacctgt
    16621 atcggcgtct tttcaggaag cagcgcatac aggctgcccc acttaccgat caggtcgtca
    16681 ctgccgccta aaaatgggtt aagttccaga ataaagccca tgcccaacgg tttgtcgcct
    16741 ttaacggaca tcagcgtaaa caactctgtt ttggtatcgt atgcaccgta attgagatag
    16801 tcgctcaaat ggtcaaagtc aggatcgaca gggttgttgt gcaaggcttc catcggttga
    16861 tcgacatcat ccgaaccggc caaccaattt ttaaattttg acaggacgcc cattacatac
    16921 ctctatcgaa cggtaccggg aatacccgat gtttcctgca gatgaagatt cacgccaaca
    16981 tcggggatgc ggtcatttgt gttgtttgaa ttggttggag aagtctcaac cgaactgcct
    17041 gaagttttgg ccccatcccc caataagcgg atgggacgat attcatttat aatctgttgc
    17101 ccgttgtggg caattaacca atcaccctga ttcagaacga catatgtgaa actttggtca
    17161 tttaaatcgc cgtccgtatc aagataggga gcgacccaaa tgcgagcaat ttcactttgc
    17221 gagcgaacgg gcgtaccgga ggaataagct tgcgttaaca ttaatgtgcg aacactttga
    17281 tcagtgtaag gttgtccaac ctgtcttttc ataccgtctt ttaaaacacc tgcaacagat
    17341 gctttatagt tactgcttat agattcacaa taaggatcgt cactgttccg ggcattaggg
    17401 catcggaatt tttcactacc gccgataccg gacatggtta aggttgaaca tccgctaaga
    17461 atcaatattg ccgcagtaat cgataaggct ttcaaacgca tcattctgct cccgctccat
    17521 ttaaccattt ttccaattcg gcacgcggca tggcaccgga tgtacgccga ccatctttat
    17581 gaatcatgct tggagtaccg cgaactttaa gctgctctgc gagtgcaata ttttctgata
    17641 cagggttttt acagttaccg gccgccggtt ctttatccat cagcatgtag ttattccatg
    17701 ctttttcacg atctttactg caccagatat gttctgcttt tgaaattgca tcagggtgga
    17761 gggatttaat cgggaacatg aaaacgtatg cggtatagtc tgtcatgccg gccaatgttt
    17821 cttccaaacg acgacagaac gggcaatccg ggtcggaaaa aagtgcaaat tctcgcttgc
    17881 ctttgccgcc attaccttta acgattttga tggcgttttt gaatggcagt cgggaataac
    17941 tcttttgtgt taccgctgaa cgggccatct cggtcaagtc tttctgctct tgcatatcgt
    18001 acaacgcgcc aaaaatgaaa tagcgaccgt tttcttgtac ataggcaatg ttgtcaccca
    18061 ttgtcacttc ataaattgaa gccatggggg tagcctttac tgaagaaaac gtggtattcg
    18121 gatacaactt gtgcagagtg cttccaacag ttttgacatc ggcaaaggcc gtctgaaaag
    18181 ctgtgattgc tgcaatagtg gccaagattt tctttttcat agatggatcc tatttggttt
    18241 cgccggtatc aatttcgata ccttgagtca gtacgacatc gacttgacgg cctgcattga
    18301 cttcaactac cgggaagacc ttatcggcca gttttatgta atactcagca agcctgtcag
    18361 ctgcaccacc gataccagat gcaatccctg cacgatattg atcactgccc cgaatagagg
    18421 ttgtgctgcc aaatgcggta ttattcgtca ccttgaatgc ttccgatacg cccttaccca
    18481 taccgctaat cacgccggac atcagtgcat ttgccaagag ttggccttgt ttcgttacaa
    18541 gattacctct cacgcctgtt ttgccgtctt caccggcaac gtaacctttt accggcatgt
    18601 cgatggctcg gccatcggta cctacacagc tgagattctg cagtctgatg taagcgcgtt
    18661 ctgaagatat atcgccgtaa gcctgcccgg ttacgaaaca ttctctgaaa ttgtatttaa
    18721 accggttggg aagttgcgca aaatccgtta cgcgcattaa aacagggtgg gggctggcat
    18781 tttgtgcctc acccccggtc ggtgcgtcaa ccccacctaa cagtacggat cggaaaaaag
    18841 taccgctagg tatatacgag tcacgcgccc gaaacttgcc ttgcgagacg acaaccttac
    18901 cgccgtcttc aactacttct atattcatac gcggggtttt tgatttaacc cactccgctt
    18961 cttttaattg cggggaaacc cgtacatttt cattcggatt tccggtattt accgatccgg
    19021 tcgttccagg ttgcagctct gcttcactca tacttcctga aacgattttc cgttcaatgg
    19081 acctatctgc cggaggcgcc ccgttcggca atgtgcctgc cggaggggcc ggaggaagcc
    19141 ggccgttatc cccgataccg ctaattgcag gcggtttgcc taatccatca ggccccagcc
    19201 ccttacttgt atcaggatta ctgctgttct ctttttcttt taactcctga accatggttt
    19261 ccaattcgct gatttttcga tttgcatatt caatcttcga actttctgtg ttcatccata
    19321 aggaattgtc cgtaatgcct gcttgggggc ttgtaaaatc agttctgaga atctgccgtt
    19381 tgttttgaac ctgtgtgact tcggcagatt tctttttatt gccttcaatg acataaattg
    19441 cactgcccac aatcgccgcc atgctgcccg caaccatgcc cgcgatggct aactggcgtt
    19501 ttcgcgctgc tgaaagttta aatttgttta ctttcaccct catctcaacc tcccggacgg
    19561 ctgataataa atacgtcggt aatttccccg ggttgtagga tctgtttccg aaccgctacc
    19621 gccaaaactc cttgtcggta aaattcctgc tctctaattt caagttgttt agtacctaaa
    19681 ttagttaatg taaaagaaag gccttgcata tcagcggcgg tgtaacttcc gttttgaata
    19741 aagagggtgt ctttccataa tgggacggtt tgatattcat gactatgatt gatgcccata
    19801 tcgccggtag tgccacgcat catagaggcc atcatttttt tgatggcccg tacatattct
    19861 gtactattca tcgttacagg cattggaccg gtttgcgaag ccaatactgc tgcttcacgg
    19921 cgattagctc cagccacatc gattacgatg ttgtcaccct gttttgatgt aggtttaaga
    19981 accagcaaat aggtcttacc ttcttcgctt ataacgaaaa gatttgtcgg attggaggtc
    20041 aaactacgga caaacagttg gcctgttgtt gtatctttct gaagctcaag atcaccctcc
    20101 ataaatttcc atgatgaaat tcgaccgcct tcaatggcga ttctgctcaa gttccgttta
    20161 cttattgaaa caacgtgagg tgtattttct gttgccggca ctcgttgcgc tgcaaaacta
    20221 gtcgcgggtc cggctgccaa caaggcagaa aagacaattt tttttaacag tgaacacata
    20281 tcaattacct cgattaccgc ctttaaattc tgttgccgtt ttactgattt ctacatcctc
    20341 ggtttcaact tcggattttt cctgacctgc gggttctgct ttagttacac gcttttgaac
    20401 ttctttaatc gataataatt gcagtgttcc ataattattt ttgaaagaaa taagtagctc
    20461 gcggtctttt tgctctacca gggcattgtt gcgtttaacc tcaaaaaccc cacgaatgga
    20521 aactgtattg tctgaaatgt ccgccgttgc ttctgtcgcg ctaaaagtgg tgccgacatt
    20581 atttttctta acccataagg catttaaaga cagctccctc tctagggcat ctttataatc
    20641 aggtgaaaca atcttcaata attgactatt ctgataatcg actgttttag gggttacatt
    20701 taagagaaga taggcagcat agggagccat ttcttcaaga tattctttag aaaaagcgat
    20761 gtttgataca gtcattgacc gccggatttc cggcggggtc agcgtcgttt gaacaatcgt
    20821 acctttgaag agcagggtcg cggacaaaaa tagattgaca gctatagaca ttcccaaaag
    20881 tatccaaaaa aagaccttta tgccggttct tatcgccaat tcactcaaca tatcttcagt
    20941 cttcaattta gaaactcccg tttattcgtt tcaggtatcc gtttgttttt ttcattaatg
    21001 ggtaagtacc agtaaagaac atgcaaaaaa aaccattgat gcttgccaga cttaagcttg
    21061 ccccacctcc atgcaatgaa aaggctaatt gacatggaaa tgaaaaagtg acgagagaca
    21121 atacctatac cgaagccgga cataaataat ataaaaacgt ccaagtccca aataaatgcc
    21181 tttttgggat cgtctatcga taccggcaca tgataatctc tcatcacttc tcttatctag
    21241 tttgattaaa taatcaaggt aaacatacct ttaatgatgc ccgggcctaa tgttgcggcc
    21301 aagccaacac ccaaaccgac gatacatggc atgatggttt gtttcatcag gcctaccgcc
    21361 aaaccgatca agaatgcagt caagcccaaa gccataccca gataaccttc agaccagcct
    21421 gttaccatgt cagccaagcc tttgaattcg gcacctgttg tagcggccat tgccaagtta
    21481 gcatacaatg ccaatgcaac cgcactagcg gactttacta atttattgcg tttgatattc
    21541 attatgaacc tcattaaaca gagcttatat cgccaagctt ttgcgtccga tcattcttta
    21601 ccaagtgatt acaacggttc tcgtatcatc actattgcag caggccgggg aacttgctgt
    21661 tcttattttt gcggatacat tatgtttcct cagccattta cctattactg ctgcccgttg
    21721 tttagccaaa cgtctattaa ttgcagtatt tcgacctccg atactgtcgg cccatccgcg
    21781 taaataaacc gtctgagtat ttttcaattt aggcagaaca cgtttgagcg ttctcacgcc
    21841 ctccgcaccg aggtgcgaac tgcctaaatt gaaaaacacc ctgatctcat ctttttgaag
    21901 attggtttgt gtttgagcat aaaccggttg ttccgccaaa accttgcgct caaatcccga
    21961 acactcttca ttgcggcaga agacaaattc gcccagctga ttttgttcca ctgtataagt
    22021 tgcgtcttga ggcagcccgg ccacttcctg ttttggggcg gcacaggctg tcagaatcat
    22081 tgcggaggct acgaagagcg tgtttttaat cgtttccaat tttgatatac cttatttgcg
    22141 taagtcattc ttgcgcgata gcacgcccgg cctttaagtt tggtacatgc ggcgttataa
    22201 gcaccaactg cttcccatga tttcccatgt tgccgataac tatttgccaa tatccatgca
    22261 ccaatatgta catttgtgca tggattccat acatccgccc ctgttaaacc aaatttcttg
    22321 tggagtacgg gtagccatga acggttgata cccatcaagc caatatcagc tgtatgactt
    22381 tcaatattcg gcctgaaagc gctctcggtt aatgcgatcg attgcaacat ggcgggatcg
    22441 atgccatatt tactgccggc ttccttataa caaaaagcaa ctgctcttgc agatgtgagt
    22501 accaaaacac ccggtacgac gaactgtaaa agtatggccc ttaatctcat gtctttactg
    22561 tcgttgtatg tatgactaat ttttatctcg attcgacaat ttttgttaaa tcaaacgaaa
    22621 ttaactaaat tttttagaaa tgtttcttta aagatagatt atggtataat taaaagttac
    22681 gc
//
LOCUS       DAWXHA010000018        22525 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.018, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000018 DAWXHA010000000
VERSION     DAWXHA010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22525
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.018"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..177)
                     /locus_tag="AABD07_000559"
     CDS             complement(<1..177)
                     /locus_tag="AABD07_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFB2355146.1"
                     /translation="MKELKWIEEARKYLGAHEKVNGKSNPVLLAMLQEMGNFNQEQKA
                     WWKETDTPWCGLFVG"
     gene            384..620
                     /locus_tag="AABD07_000560"
     CDS             384..620
                     /locus_tag="AABD07_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HFB2355147.1"
                     /translation="MLRLQKWGNSAAVRLPARLLTALNAKIGDALETEIRNGELLIRP
                     VKRYRLSDLLAETEAAPPRAEGWEEMPDVGQEGV"
     gene            620..967
                     /locus_tag="AABD07_000561"
     CDS             620..967
                     /locus_tag="AABD07_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFB2355148.1"
                     /translation="MYIPERGDIFHLAFDPAAGTEMKGGHYAIALSPRAYNRATGLVY
                     ACPISQGRAAAARSGGMISTLLGAGTATQGNVHCHRMKALDWKIRRAAFRETVPDYVI
                     EDVLARIGAVLFD"
     gene            975..1208
                     /locus_tag="AABD07_000562"
     CDS             975..1208
                     /locus_tag="AABD07_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355149.1"
                     /translation="MRSLSAGGSIRFHTRPYFKAFKISAGFQINAVKGAAHKTARKNR
                     RTDRYFSNKSNILRNSLKILVYSAYSYSFLNKD"
     gene            complement(1336..1668)
                     /locus_tag="AABD07_000563"
     CDS             complement(1336..1668)
                     /locus_tag="AABD07_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355150.1"
                     /translation="MGFLQFGLLFAAAGGVLGAVWASLQERGRPVQAVLEAFISAIAA
                     AAAAERFVPLDQAWTCAAAGVFAGMMTGHALDTVRALAPKVLRGYLGGLAEKLTGVKD
                     GGSSDGKD"
     gene            complement(1669..2139)
                     /locus_tag="AABD07_000564"
     CDS             complement(1669..2139)
                     /locus_tag="AABD07_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355151.1"
                     /translation="MLRFLTERRFLPAGFQAWMFGTATRVLEAVSGLGLSGYAAVFAL
                     APDEIYAWRIYYKFQDIPEAWTVGVLAAAGLLQTALLFARGVRACVASAYLLLFSGFV
                     WFLVSVAFWGAYPPLNTGMVVPPLLAFFCALAGNNALRFLFSAQKSRGLADEGS"
     gene            complement(2210..2515)
                     /locus_tag="AABD07_000565"
     CDS             complement(2210..2515)
                     /locus_tag="AABD07_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355152.1"
                     /translation="MIEDKKIVALNFAVEDGMTGASAAYHVVEHIGADYRNGYVTATL
                     NGYVSENAFKSGKRYLLARTLDFQETDITAPDPGWVYRKALEGAAGIPKDAQPVYAE"
     gene            complement(2627..6772)
                     /locus_tag="AABD07_000566"
     CDS             complement(2627..6772)
                     /locus_tag="AABD07_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HFB2355153.1"
                     /translation="MGGKSSTVTSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLIW
                     YGDFVTIEHKTTTRRGGKGGGGVKQVGISYTYEAAVMLALCEGEIQGVGRVWRDKEKF
                     DSPAQLRLTLMRGGDEQPLWTHLQQAKHQGQALNYSGTAYLCSPNYELTKSAQIYQHN
                     FEVIGKSGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLS
                     PAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSHSGNGAVYVADNKAAYDL
                     TDDDFIVSGAQDPVKAGRKTNADAFNQIQVEYLDRDNDYNVAIAEAKDQANIEQYGLR
                     PKDAVRMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGL
                     GLNKTPVRITEIEEDGEGVLSVKAEDCPAGVYTVSEYPTQPSSGYSADYNVSPGNAHV
                     PVIFEAPLQLTGGEPQIWLATAGGGMWGGAEVWVSADGDSYTRVGAVNRKARFGALTA
                     DLPDGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYADAELKGVGRY
                     TLGNLTRGAYGSAVNAHAAGSRFARIDEALFKYAVPRNWIGRTVWVKLVSYNVFGGGI
                     QDLAEVPAYSYTIEGAPLGQIQNLRLTSSWAYGKEAVIAWDKLDGADTYDVEIYAGGS
                     RRRLRAVDGIVDNSYTYTQADMKADGGQVRGIVFKVRGRAVTGKTGNWAQIAAQNPQL
                     QALQGISIDSGLKQAFFTCQKPDEEDFAGIIVWVCENAACPAADANKAYDGAETFITI
                     AKCGGKPLEKGKTYYLRAAGYDSFGKDNLKISGSISFTVYDVSATDLSESSLNQALRD
                     KINLIDGNGAGSVNERVEAVRSTADGNAAAVQTHARSINGLEAQYTVKVDANGKVAGF
                     GLATTPKNGTPESKFIVNADRFGIGAAGKADVFPFVVDTQKNRVGINGELVVNGKAVV
                     DKLNAGDIHGGKIAADTLDANRLKAGSVTAREIGAAAVTADKIGANAVTADKIQVADL
                     SAVSSNLGSITGGSLNIGGGNFTVSSDGILTADNAVIRGRIEADSGYFNGTVRASSVE
                     GDVLRAHRLRWTEGNVWVLDLDKDPLPRVLIPNFYVVSETFGNNRVQAKLLLNGGVLA
                     PREVRETENYTNYIWRGRTFGRYEDLPPRARGGGDYTEQSGSRYRTRLEYQIQVIPAG
                     KPVSLKLSLASHESVFSPFVSVSYLAQSDYEYKQLLGRMVWRTFAESFRYDSKKQVYL
                     GGDRRVHDYQNQMYKHWNAYGGLLQLPDDIYGISFEYRPFTNADWSTMLAFDRSDKFV
                     VVKKYRGHAPQQYSLFQEEFNTAVPKSNLLFFVEHWWQYIELRNIRVLIPESRENEVW
                     QVG"
     gene            7012..7290
                     /locus_tag="AABD07_000567"
     CDS             7012..7290
                     /locus_tag="AABD07_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFB2355154.1"
                     /translation="MESQTFASVFDALCDTPAQAANMRLRAGLMMHIADTVRENGWTQ
                     KQAAEHCGLTRPRINDLLNGKIDKFSLDALVNINAGLGQCISLSFAPA"
     gene            complement(7318..7749)
                     /locus_tag="AABD07_000568"
     CDS             complement(7318..7749)
                     /locus_tag="AABD07_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355155.1"
                     /translation="MPSETDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMLLVAVY
                     GAVGLLPEGFDPRPYPQDWHLHRDCERYLGFVTQFCRETESPQAGDIAVWRFGRSFSH
                     GGILAGGGKVIHSYIGRGVVSDDIGQAELIGRGVRFFTFSF"
     gene            complement(7751..8605)
                     /locus_tag="AABD07_000569"
     CDS             complement(7751..8605)
                     /locus_tag="AABD07_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HFB2355156.1"
                     /translation="MKAATKELIDLLHGGDEFQMADLYTITLSGGRVLRHTGADMPVV
                     WDGQAYGAHELVIKRGATRTAVGLEVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGA
                     RVRIDRVFFDAGLRPVGAVNIFSGRVSDVSGGRSSVKVDVKSDIELLNVSSPRNIYQA
                     GCMRTLYDDGCKVNREKFTVNGRVTENSRTGTVLKHNLTQPDGWFSQGVIKFAGGRNA
                     GLSRTVKAHGGNTFELALRLPYPPQAGDAFKVYPGCDKRRDTCKDKFDNIVHFRGFPF
                     IPSADTVV"
     gene            complement(8602..9201)
                     /locus_tag="AABD07_000570"
     CDS             complement(8602..9201)
                     /locus_tag="AABD07_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2460 domain-containing protein"
                     /protein_id="HFB2355157.1"
                     /translation="MGNAVFPEFPGLKWGRKKTAVWSTGTQKSASGREFRTAYYTYPQ
                     WRFSLSFEVLRTKASVNELEKLAGFFNARKGSFESFLYEDPADNAVTDQPVGNTVQGV
                     ARYQLVRSMGGFIEPVSAVKERPAVKVGGTALAYGRDYTVTDKGVLVFNTPQPPGRPI
                     TWTGGFYFRVRFTSDTVDFENVLGSLWAAKKIEFTSVKL"
     gene            complement(9201..9467)
                     /locus_tag="AABD07_000571"
     CDS             complement(9201..9467)
                     /locus_tag="AABD07_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355158.1"
                     /translation="MIAHVCASTGWTWDYVADNLDLPRIKHLNEYWREHPPVHILAAS
                     YMGVKPSSGSVQSEADEAEAVGMLGGGELSEDEFDALLKAKGII"
     gene            complement(9479..9808)
                     /locus_tag="AABD07_000572"
     CDS             complement(9479..9808)
                     /locus_tag="AABD07_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355159.1"
                     /translation="MTVRIKGVTVELNGADYVIPPIALGALEQLQERIGSFDGNAADA
                     GQISTVIDCAHAALKRNYPDLTREEAADLIDIGNMNEVFAAVMDVSGLKRREQEAAQA
                     GEARAAD"
     gene            complement(9869..10642)
                     /locus_tag="AABD07_000573"
     CDS             complement(9869..10642)
                     /locus_tag="AABD07_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355160.1"
                     /translation="MQLTFGSGEVFAQMITDAYGNRVQNATPVRIMGLQEMSVDLSAE
                     LKEFYGQNRYPLAVAQGKVKVSGKMKGALINGLTLNTLFFGTEYATGTMKALWAETTG
                     KVLDGDNYSYLQAAAPGGGKFAEDAGVMGQDGTAYIKVASSPKQGQYTVSESGVYAFN
                     SSDKGKTVYPSFTYTQTMPPAKKIELTNMATGNTPTFKMRYLTQFKGKKALLELESVT
                     SGKLGLFSTKNDDFSVPEIDFTASTDEAGFKIGTLWIQE"
     gene            complement(10668..11096)
                     /locus_tag="AABD07_000574"
     CDS             complement(10668..11096)
                     /locus_tag="AABD07_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355161.1"
                     /translation="MNREAVYSALWAKLDALDGFVTKSRKLVHWNDVKRYDQPALFMA
                     QGDMQALTLTGRETKWILRADVYLYVQTAGQPPAPVMNPLIDAVCNAVNAVHPVTGKT
                     DLTADGADIEYCRVEGTVETDEGTLGEQAVCIIPIVICAA"
     gene            complement(11093..11575)
                     /locus_tag="AABD07_000575"
     CDS             complement(11093..11575)
                     /locus_tag="AABD07_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HFB2355162.1"
                     /translation="MLKMEFIGGGILAAVFKAYAADVQDAVVKSVGRSALRLQSEVML
                     NRLSGRVLRVRTGNLRRSVHQRVNVSGNVVSGEVDTNVRYGIAHEYGFAGSVNVKASL
                     RQVRQAFGKPLKPPRYVRVRAHTRDVKLPERSFLRSALRDLTPKFADDLQKSIGKVLK
                     "
     gene            complement(11575..12105)
                     /locus_tag="AABD07_000576"
     CDS             complement(11575..12105)
                     /locus_tag="AABD07_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HFB2355163.1"
                     /translation="MAAPVSLEEFKQRIGVEHDRRDDFFLSVIDGVSAAAEAYIGRSL
                     LAADYVGRYDGNGKDRIVLDNYPVLSVSSVKINGADAGGWEFDNWLLMRPEGFARGLK
                     NVEVSYRAGYERMPADIREAVMIIAVQRVNEIEGKGVRSKTLAGETVAFSTFGNSGGM
                     PPSAFAILNEYKRKGV"
     gene            complement(12192..12425)
                     /locus_tag="AABD07_000577"
                     /pseudo
     CDS             complement(12192..12425)
                     /locus_tag="AABD07_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238697.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12477..13976)
                     /locus_tag="AABD07_000578"
     CDS             complement(12477..13976)
                     /locus_tag="AABD07_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355164.1"
                     /translation="MNVNQLTQETIELMKSAQAGGGPPDKGFTQPAGFTAGLQTYDLS
                     APSQKLYPVLTPLRNRIPRVGGGRAIGSNWKAVTNINVGNQRAGIGEGRRGGVINHET
                     VERNAQFRAIGLENQVTFEADYAARGFEDVKALAVAQTLQATMVAEEMILLGGNTSLK
                     AGVTPTPTAVVSADAAGKLGVSTLSVICVALGLQAYWDVAGANNGATGQSPNIKTAQV
                     PAKITRRNADGTTDTFGGGSARKSAAASVSGIEAGKKVTAVIPAVRGAVAYAWYWGAA
                     GSEKLGAVTTAAKVEISADAEGTQTAASLPSEDNSTSILEFDGLLTQIALPDSGAFWS
                     DNKGGGLTSDNAGGVYEFEEAFAHFFTRYRLSPDTVYVNARDLAALTKLIIGNSGAPL
                     IKLNVDVNNTANIRAGVVVGSYMNKITGDDLNIVVHPNLPAGTYLFYSSRLPAYVQGV
                     GNLLQVRTRQEYYQIEWPLRTRMYEYGVYADEVLQGMFMPAFGMITNVG"
     gene            complement(14017..15174)
                     /locus_tag="AABD07_000579"
     CDS             complement(14017..15174)
                     /locus_tag="AABD07_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="caudovirus prohead protease"
                     /protein_id="HFB2355165.1"
                     /translation="MTKLYAQIAKTEAQDDGTVKVWGYASSEAVDSDGEVVAAEAMKA
                     AIPDYMKFGAVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVTKVKTGVYKGFS
                     IGGRVTARDDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKPKDEAGAADKDGKP
                     SDKPTEEEDENPKDGDKGPKTEDKGDKDAGKKDEAGKSASVELSESEIAALKAVLAKA
                     DKPKGGTAAKSMYQVKSPADVLMSLKWLVEDASYDNIDEAVTAQIKESAAGLAESLKA
                     LAASEADKPADGLAAKAGKSGDLAKAESADELAKAQDALKKSNDALAKAQAEIESLKK
                     QAVPPKGSTKAISKAEDNGEDPLKGFQPIVKNDGTLDDVATLIKAKQTGRL"
     gene            complement(15242..17389)
                     /locus_tag="AABD07_000580"
     CDS             complement(15242..17389)
                     /locus_tag="AABD07_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HFB2355166.1"
                     /translation="MSKKTPLSQGFIARVAAGVRYAFTGNADGWFDAGEPPAPAAQQA
                     EGRRFDYEPFYNVGHSKPREREAVGFAQLRALADNYDVLRLVIEARKDQMECLKWTIQ
                     KRDVESTEDDESQRKDRKVDEAVAFFRSPDKEHTWADWLRILLEDLFVIDAPCIYPRK
                     TLGGGLYALEVMDGATIKRVLDNTGRMPLPPDTAYQQILHGMAAVDYTADELIYRSRN
                     NRSYKVYGYSPVEQIIMTVNIALKRQVHALEYYTAGSVPDALVGVPETWSADDIRRFQ
                     EYWDLLLSGETAQRRKMRFVPGELSRNFRETKQPPLKDVYDEWLARVVCFAFSVEPTP
                     FVAQVNRSVAETSREQSLSDGMGSLKNWVKALIDDVLARYMDMAAYEFVWKGEESLNP
                     KEQAEIYAIYKNAGILTADEIRAELGKEPLPGQGQPEPDKQDGRKPEEPPNQGAEKLG
                     KSESPMSEDESAALIEAYLLTRIDGLAEQIAALIEGAAVDWQAGDLAAELSRAAGVVA
                     NGLDFGDWSGLSDVVEPIIRRVAEDGAVAALLRVMPEPAAGMVTNIRSRAVKWAHERA
                     AEMVGMKRAGGGLVRNPAAEWQITEGTREMIRAQVAEAMRNGDSVQELAGRLKESHAF
                     GNARARTIARTETAMADGMGNLIGWEGTGLVAGKQWITAKDDKVSDVCNANGGMGVIG
                     LHEPFSHGALTIPGHPNCRCAVVPVLAGDMPES"
     gene            complement(17386..18807)
                     /gene="terL"
                     /locus_tag="AABD07_000581"
     CDS             complement(17386..18807)
                     /gene="terL"
                     /locus_tag="AABD07_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HFB2355167.1"
                     /translation="MALGQFDDVETSVIRSLSSASLYMFTRRMFYQRRGYVWQRANHH
                     APICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDCEFIHASYSAAL
                     AVNNSVQIRNLVQHEEYRAIFPDLALAGESGHHWKTTAGGVMYATGAGGTITGFGAGR
                     HREGFGGCIIIDDPHKADEARSEVRRQNVIDWFQNTVESRKNSPDTPIILIMQRLHEK
                     DLAGWLLDGGNGEEWEHLCLPAIQEDGTALWPEKHDIETLRRMEQAAPYVFAGQYLQK
                     PAPPDGGTFKPDNLQFVKALPAGNIRWVRAWDLASTANGGDYTAGGRLGVTEDGRYII
                     ANVVRGRYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSA
                     GPESGDKVTRAGPFAAQVNIGNVMVLDDGTWDTDALIAEMRMFPNGRHDDQIDCLGRA
                     FGELLDTRTGMIDFLRSQVEAVK"
     gene            complement(18869..19318)
                     /locus_tag="AABD07_000582"
     CDS             complement(18869..19318)
                     /locus_tag="AABD07_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355168.1"
                     /translation="MSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPM
                     KTIYRWLEANEEFRHQYARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKW
                     AASKIAPKKYGDKSELDVKSGDGSMRAAVRLDAEEYRKIAEDVLRRV"
     gene            complement(19611..20438)
                     /locus_tag="AABD07_000583"
     CDS             complement(19611..20438)
                     /locus_tag="AABD07_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HFB2355169.1"
                     /translation="MNNSVQISNISIHQTEIGLFSLNDLHRASGGEDRHAPRRWLQNI
                     QTNDLIKELEKDGKPSIQSKQRLGTFVCRELVIAYGMWISPKFALQVIQTFLAVSDGI
                     KSAKTTADDRTGLRQAVAALVGRKGIDYSSAYSMVHQRFNVESVEGIPAGKLPEAVAY
                     VHALTLHTGLTGEVLDREPLPAPQPALPISGNALYDLAVAVSYGARAIQMGRDVSLPL
                     KQLGCRQAVTMWTVWAETRSRLKAAANALEALSAHADAEHAEKIRPILPEIRNLSAV"
     gene            complement(20731..21891)
                     /locus_tag="AABD07_000584"
     CDS             complement(20731..21891)
                     /locus_tag="AABD07_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HFB2355170.1"
                     /translation="MNAAAVSAVFKERIASHAEHVKKVAHICTTEETTKQALILPLLD
                     ILGFSAFDPNKVRAEYQADFPGAKSGERVDYALFCNGAPVMFIEAKSYTENLSNHCPQ
                     LSRYFNATPEIAICAITNGREWRFFTDLSNKNIMDSEPFLTVDVTMLNENDMAQLYQF
                     RHDKFQPDALRSLAEESIYLTAFTESITESLKEVDLDFVRYVAGRANIQRQFTQRYLE
                     SIRHIVKQAVQNTVSSMVVSGLSAPKVQEEAAPVEKEQEDPTAPIIDPENNKIVTTYS
                     ERRLFDLVKSILPDDASIEAKDTESYFGVLVDGKSNRWILRYFDNKQRPSVIFPIELE
                     ESDISNIERCGLEVSGNQVIIDTPENLLRVAWLVIDSYRFCCDDENFKRKPK"
     gene            complement(21982..22389)
                     /locus_tag="AABD07_000585"
     CDS             complement(21982..22389)
                     /locus_tag="AABD07_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355171.1"
                     /translation="MNQQEFEFMNDLARAFERRYRDTRSLNRCLSIEGRYMGEEACPH
                     KPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGE
                     GPLHLQTDLGLAAWYRAIRQAAGDDFDLLFEKV"
BASE COUNT         4801 a         6968 c         5649 g         5107 t
ORIGIN      
        1 tccgacaaac aggccgcacc acggggtatc tgtttctttc caccacgctt tctgctcctg
       61 attaaaattt cccatttctt gcagcatcgc taaaagcaca gggtttgact tgccattcac
      121 tttttcgtga gcgccaaggt atttacgggc ttcttcaatc catttcaatt ctttcatttc
      181 ttttccttcc gataaaagac gagatgtaaa ctttcggttt acaccccggc caagcctttg
      241 attgcaggtt tccgcaacac cgatacatcc ggtttcacac gttccgtttc catctccact
      301 cctgttacac gccgccgctt ggcaaaatcc gtttcaggcg gcataatgta tcgacaacgt
      361 atctacaaca cgaaagcaaa accatgttgc gactgcaaaa atggggcaac agcgcggcag
      421 tccgtctgcc cgcccgcctc ctgaccgccc tcaacgccaa aatcggcgac gcgctggaaa
      481 cagaaatccg caacggcgag ctgctcatcc gccccgtcaa acgctaccgc ctgtccgacc
      541 ttttggcgga aacggaagcc gccccgccgc gcgcggaagg ctgggaagaa atgcccgatg
      601 tcggacagga gggcgtttga tgtatattcc cgagcgaggc gacattttcc atcttgcctt
      661 cgaccccgcc gccggtacgg aaatgaaagg cggccattac gccatagccc tgtcgcccag
      721 agcttacaac cgcgcaaccg gcttggttta cgcctgcccg atttcacaag gcagggcggc
      781 ggcggcaaga agcggcggta tgatttccac actgctcggc gcgggaacgg caacacaagg
      841 caatgtccac tgccaccgga tgaaggcatt ggattggaaa atccgccgcg ccgccttccg
      901 cgaaaccgtc cccgattacg tgattgaaga cgtattggca cgcatcggcg cagtactgtt
      961 cgactgactt cagagtgcga agcctgtccg cagggggaag catccgtttc catacccgcc
     1021 cctatttcaa agcattcaaa atatccgccg gcttccaaat caacgccgtc aaaggcgcgg
     1081 cgcacaaaac cgcccgcaaa aacaggcgca ccgaccgata tttctccaac aagagcaaca
     1141 tacttcgcaa ctccctcaaa attttggtat actccgccta tagctattcc ttccttaaca
     1201 aggattaggt taagaaacgc cgcaaggatt ccgcccctcg cggcgtttcg ccgttcacac
     1261 cccgcgcgta atgtcgtgcg tcagccggac gcgcccggaa cacagcgtct tcacgcgccg
     1321 cgataccgct cgaaatcaat cttttccatc cgaagaccct ccgtctttca cacccgtaag
     1381 cttttccgcc aagccgccca gataaccgcg caacaccttg ggcgcgagcg cgcgcaccgt
     1441 atcgagcgcg tgccccgtca tcatccccgc gaacaccccc gccgccgcgc acgtccacgc
     1501 ctgatccagc ggcacgaacc gctccgccgc ggccgccgcc gcgattgcag aaataaaagc
     1561 ctccagcaca gcctgcacgg ggcggccgcg ttcctgaagg cttgcccaca ccgcgcccag
     1621 cacgccgccg gccgccgcaa acagcaaacc gaactgcaag aaccccattc acgacccctc
     1681 atccgccaaa ccccgcgact tttgcgccga aaacaaaaac ctcaacgcat tattccccgc
     1741 cagcgcgcag aaaaacgcca acagcggcgg aacgaccata cccgtgttca aaggcgggta
     1801 cgccccccaa aacgccaccg aaaccaaaaa ccacacaaag cccgaaaaca gcaaaaggta
     1861 ggccgaagcc acacaagccc tcacgccccg cgcaaacagc aacgccgtct gaagcagccc
     1921 cgccgccgcc agcaccccca ccgtccacgc ctccggaata tcctggaatt tgtaataaat
     1981 ccgccacgcg taaatctcgt cgggcgcaag cgcgaacacc gccgcgtaac ccgacaagcc
     2041 caaaccgctg accgcctcca gcacccgcgt cgccgtgccg aacatccatg cctgaaaccc
     2101 ggcgggcaaa aaccgccgtt ccgtcaaaaa cctcaacata cccgtcacac accccccggc
     2161 aaaacaccgc gaagccgaag ccccgcagtg tccgacgccg tctgaaaact tattccgcgt
     2221 aaaccggttg cgcgtctttg gggatgcccg ccgcaccttc caacgccttg cggtacaccc
     2281 aaccggggtc gggcgcggtt atgtccgttt cctgaaaatc caatgtgcgc gccaacaggt
     2341 agcgtttgcc cgatttaaac gcattttccg acacatagcc gttcaacgtc gccgtaacat
     2401 aaccgttgcg gtaatccgcg ccgatatgtt cgacgacgtg gtaggccgca ctcgcgccgg
     2461 tcataccgtc ctcgactgca aaattcaagg caacaatctt tttatcttca atcatttcaa
     2521 atctccaaaa gcccgctagg ggcgggaacg aaaatgccgt ccgaggtctt cagagggcat
     2581 tgcccggaca aaacaggaaa aacccaaacg gcggcatacg ggggcgtcag ccaacctgcc
     2641 aaacctcgtt ttcgcgcgat tccggaatca gcaccctgat attgcgcagc tcgatatact
     2701 gccaccagtg ttccacaaaa aacagcaggt tggatttcgg aacggcagta ttaaactcct
     2761 cctgaaacag agaatactgt tggggcgcat gaccccggta tttcttaacc actacaaact
     2821 tatccgacct gtcgaacgca agcatcgtac tccagtcggc attggtaaaa ggccggtact
     2881 cgaacgatat gccgtagata tcgtccggca actgaagcag cccgccgtaa gcattccaat
     2941 gtttatacat ctgattttgg taatcgtgta cacgccggtc gccgcccaaa taaacctgct
     3001 tcttactgtc gtaccggaaa ctttccgcaa aggtgcgcca aaccatcctc ccgagcagct
     3061 gcttgtattc gtagtcggat tgcgccaaat acgaaaccga cacgaacggc gaaaacaccg
     3121 attcgtggga agcgagcgac aacttcaggc tgacgggttt gcccgcgggg atgacttgga
     3181 tctggtactc gaggcgggtt ctgtaccttg agccggattg ttcggtataa tccccgcccc
     3241 cccttgcccg ggggggcagg tcttcgtacc tcccgaaagt tcggccgcgc caaatataat
     3301 tggtatagtt ctcggtttcc ctgacttccc tcggcgcaag cacacccccg ttcaacagca
     3361 gctttgcctg caccctgttg ttgccgaacg tttccgaaac cacataaaaa ttcggaatca
     3421 aaaccctcgg cagcgggtct ttatccaaat ccaacaccca aacgttaccc tccgtccaac
     3481 gcagcctgtg cgccctcaac acgtcgccct cgacggacga agccctgacc gtgccgttga
     3541 aataacccga atcggcctca atccgtccgc gtattaccgc attgtcggcc gtcaggatgc
     3601 cgtctgaaga caccgtaaaa ttacccccgc cgatattcag gctgccgccc gtgatgcttc
     3661 cgagattgga agataccgcg ctcaaatcgg caacctgaat cttatcggca gtcaccgcgt
     3721 ttgccccgat tttatcggcg gtaacggcgg cagccccgat ttcccgcgcc gtaacgcttc
     3781 cggctttcag gcggttggca tccagcgtgt ccgccgcgat tttgccgccg tggatatccc
     3841 cggcgttcaa cttatcgaca accgccttgc cgttgaccac caattcgccg ttgatgccca
     3901 cgcggttttt ctgcgtgtcc accacgaacg ggaacacatc cgccttcccg gccgcaccga
     3961 tgccgaagcg gtcggcattc acgataaact tgctttcggg cgtgccgttt ttcggcgtag
     4021 tcgccaagcc gaagcccgcc actttgccgt ttgcatcaac cttgaccgtg tattgcgcct
     4081 ccaagccgtt gatgcttcgg gcgtgtgtct gaaccgccgc cgcattgccg tccgccgtcg
     4141 atcggactgc ctcgacgcgc tcgttgacgc tgcccgcgcc gttgccgtca atcaggttga
     4201 ttttgtcgcg caaagcctga ttcagactgc tttccgacag gtcggttgcc gatacgtcgt
     4261 aaacggtaaa cgatatgctg ccgctgattt tcaggttatc tttgccgaaa ctgtcgtaac
     4321 ccgccgccct caagtaatag gtctttcctt tctccagcgg tttgccgccg catttggcga
     4381 tggttataaa cgtttccgcg ccgtcatagg ctttgtttgc gtccgcggcc gggcaggctg
     4441 cgttttcgca aacccaaacg ataattcctg caaagtcttc ttcgtcaggt ttttggcagg
     4501 taaaaaacgc ctgtttcaaa ccgctgtcga tggaaatacc ttgtaatgcc tgcagttgcg
     4561 gattttgcgc cgcgatttgc gcccaattgc ccgttttacc ggtaacggca cgcccgcgaa
     4621 ccttgaagac aataccgcgt acctggccgc cgtccgcctt catatccgcc tgagtgtagg
     4681 tgtagctgtt gtcaacgatg ccgtcaaccg cacgcagacg gcgtcggctg ccgcctgcgt
     4741 agatttccac gtcgtaggta tccgcgccgt ccaatttatc ccaagcgatg acggcttctt
     4801 tgccgtatgc ccacgatgat gtcaggcgca ggttttggat ttgaccgagc ggcgcgcctt
     4861 cgatggtgta ggaatacgcc ggcacttccg ccaaatcctg aatgccgccg ccgaaaacgt
     4921 tgtacgaaac cagtttgacc caaaccgtgc ggccaatcca gttgcgcggc acggcgtatt
     4981 tgaacaatgc ttcgtcgatg cgcgcaaacc ggctgcccgc cgcgtgtgcg ttgacggcgg
     5041 agccgtacgc gccgcgcgtc aggttgccca atgtgtagcg tcccacgccc ttcagttcgg
     5101 cgtcggcgta tgccagaaat tcgccgtcga cgtagcacaa tgtcagcaaa tcgcggctgt
     5161 cctgctccgt gccgcccgtc agctgccccg ccgaaatttc cacgcccaac gtatttgtgc
     5221 ggtcgaaaac cgcgccgtcg ggcaaatcgg cggtcagcgc gccgaaacgc gccttgcggt
     5281 tgaccgcgcc gacgcgggtg tagctgtcgc cgtccgccga tacccacact tcggcgccgc
     5341 cccacatacc gcccccggcg gttgccagcc agatttgcgg ttcgccgccc gtcagttgca
     5401 acggcgcttc gaaaattacc ggcacatggg cgttgcccgg cgaaacgttg tagtcggccg
     5461 aataacccga agacggctgc gtcggatatt ccgacacggt ataaacaccg gccgggcagt
     5521 cttcggcctt gacggataaa accccttctc cgtcttcttc gatttccgta atgcggacgg
     5581 gcgttttatt caggccgagc cccgcgtcgg tcagggttac gatgtccatc ggctcaagca
     5641 ggcagtattt ccaacccagc ttaaactcat attcgttgcg cacgtacagg gcgcgttgca
     5701 gcagttgttg cgccactttt tgcgccacct tcgcatcgca aatgccgtgc atcctgaccg
     5761 cgtctttcgg gcgcaatccg tactgctcga tattcgcctg gtctttcgct tcggcgatgg
     5821 cgacgttgta gtcgttgtcc ctgtcaaggt actcgacctg aatctgatta aacgcatcgg
     5881 cattggtttt gcgcccggcc tttacagggt cttgcgcgcc cgaaacgatg aaatcgtcat
     5941 cggtcaggtc gtaggcggcc ttattgtcgg caacgtacac cgcgccgttc cccgaatggc
     6001 tgccgtcccc gtaggggatg attttcaggc ggccttgcga aaataccgcc gcgctgttgg
     6061 tctgctccag cagttcggaa atattccgtt gcgcctcccc ctgttccgtg taggcagggc
     6121 ttaggaaaat cccgacggcg cggcaataat tgctgtaccg gtcggtatcg ccgatgtttt
     6181 gggacgggaa accgcagccg tagcgttggt tcgtcagcaa atccaatacg atttcgcgcg
     6241 ggtttgcatc ggggatgttg ccggaatagc ccgatttccc gatgacctcg aaattgtgct
     6301 gatatatctg cgccgatttc gtcagttcgt agttcgggct gcacaaataa gccgtgcccg
     6361 aataattcaa ggcttggcct tggtgcttcg cctgttgcag gtgcgtccac aacggctgct
     6421 cgtcgccgcc gcgcataagc gtcaggcgca actgtgccgg cgaatcgaat ttctccttgt
     6481 cgcgccaaac ccgccccacg ccctgaatct cgccctcgca caaagcaagc atgacggcgg
     6541 cttcgtaggt ataggaaata ccgacctgtt tcacaccgcc gccgcccttg ccgccccggc
     6601 gcgtcgtagt tttatgctcg atggtgacga aatcgccgta ccaaatcaaa ttgcccgcca
     6661 cgcgcgtcct gccgtagatg acgggcaggg tcagcccctg tgatgaccgc tgaacctgta
     6721 acgataaaat ccgctcttcg gcagatgtaa cggttgacga tttaccaccc ataaaaccac
     6781 ctcgaaactt gcaaaaatta tcaaaatcga tataatttac ttatatcaaa acagatataa
     6841 aatatgaaac cgttaaattt ttcaggcggt tcattggatt gcctgcggca attccccgaa
     6901 aacgccaaac aggcggcagg ttatcaactt caagaaaagc cggaaaaccg cgggcgccga
     6961 ttcggaatcg gcggaaaaac gttacaacaa attgattcgg gaaaagaaat aatggaaagc
     7021 caaactttcg cctccgtatt tgacgcactg tgcgacacgc ctgcccaagc cgccaatatg
     7081 cggttgcgcg ccggcctgat gatgcacatc gccgataccg tccgcgaaaa cggttggacg
     7141 caaaaacagg ccgcagaaca ttgcggcctg acccggccgc gcatcaacga cctgctgaac
     7201 gggaaaatcg acaaattttc attggatgcg ctcgtaaaca tcaatgccgg actcgggcag
     7261 tgcatttcct tatccttcgc ccccgcgtaa agcccgtcct ttcagacggc cgcaaaatca
     7321 aaatgaaaat gtaaaaaacc gaaccccgcg cccgataagt tcggcttggc cgatgtcgtc
     7381 cgacaccacg ccgcgcccga tgtagctgtg aataaccttg ccgccgcccg ccaatatgcc
     7441 gccgtgcgaa aacgaccgcc cgaaacgcca tactgcaatg tcgcccgcct gcggcgattc
     7501 cgtttcacgg caaaattgcg tgacgaaccc caaataacgc tcgcaatcgc ggtgcagatg
     7561 ccaatcttga gggtaagggc gcgggtcgaa cccttcggga agcagtccga ccgccccgta
     7621 gacggcgacc aggagcatcg cgcaatcaac acccgcgccc ttgaccattg catgatgatg
     7681 gtacggcgtg ccaagccacg accgcgcctc ttcgacgatc cgcgccctca aatccgtttc
     7741 ggacggcata tcacaccacc gtatctgccg aagggatgaa cgggaagccg cgaaaatgca
     7801 cgatattgtc aaacttatcc ttgcaggtat cgcgccgctt gtcgcagccc ggataaacct
     7861 tgaacgcatc gcccgcctgc ggcgggtagg gcaggcgaag ggcaagttcg aacgtgttgc
     7921 cgccgtgtgc cttgaccgtc ctgctcaaac ccgcgttgcg cccgcccgca aacttaatca
     7981 cgccctgcga aaaccagccg tcaggctgcg tcagattgtg cttcagcacg gttcccgtcc
     8041 ggctgttttc ggttacgcgc ccgtttaccg tgaatttctc acggttgacc ttgcagccgt
     8101 cgtcatagag cgtcctcatg cagcccgcct gataaatgtt gcgcgggctg gaaacgttca
     8161 aaagctcgat gtcggatttc acgtcaacct tcacggacga cctgccgccc gatacgtccg
     8221 acacgcgccc tgaaaaaata ttcaccgcac cgacggggcg cagtccggca tcaaaaaaca
     8281 cacggtctat cctgacccgc gcgccgtcca atacgccgcc cagggcggcc tccgcccatt
     8341 gcaggccctc aagcctgtaa tcgggcgcgg ctgaaatctg cagggtgttg gaatccactt
     8401 ccaatccgac ggcggtacgg gttgcgccgc gcttgataac cagctcgtgc gccccgtagg
     8461 cctgaccgtc ccaaacgacg ggcatatccg cgccggtatg ccgcagcacc cggccgcccg
     8521 aaagcgtaat ggtgtacaaa tccgccatct gaaactcgtc gccgccgtgc agcaaatcaa
     8581 tcagttcttt tgtcgccgcc ttcatagttt cacactcgta aactcaatct ttttggccgc
     8641 ccacaagctg cccaaaacgt tttcaaaatc caccgtgtca gacgtaaacc tcacgcggaa
     8701 ataaaagccg cccgtccatg taatcgggcg gcccggcggt tgcggcgtgt tgaaaaccaa
     8761 aacgcccttg tcggtaacgg tgtaatcgcg cccgtacgcc aacgccgtgc cgccgacctt
     8821 gacggcgggc cgttccttga ccgccgacac aggctcgata aatccgccca tcgaacggac
     8881 aagctgataa cgcgcaacgc cctgcaccgt gtttccgaca ggctggtcgg ttacggcgtt
     8941 gtcggccggg tcttcgtaaa ggaaactttc aaagctgcct ttgcgggcgt tgaagaatcc
     9001 cgccagtttt tccaactcgt ttacggacgc ttttgtccgc aatacctcga acgacagcga
     9061 aaaccgccat tgcgggtagg tgtagtaggc ggttcggaac tcacggccgc ttgccgattt
     9121 ctgcgtcccc gtactccata ccgccgtttt cttccgcccc cacttcaagc cggggaactc
     9181 ggggaaaacc gcattgccca tcagatgatt cctttcgctt tgagcagggc gtcaaattcg
     9241 tcttcggaca gttcgccgcc gccaagcata ccgacggctt cggcttcgtc cgcttcgctt
     9301 tgcacactgc ccgacgacgg cttgacgccc atatacgacg ctgccaagat atgcacgggc
     9361 ggatgttcgc gccaatactc gttcaggtgt ttgatacgcg gcaaatccaa gttgtcggcg
     9421 acgtagtccc acgtccagcc ggtagaggcg caaacgtggg caatcaccgc gccgaaactt
     9481 aatccgccgc ccgggcctcc cccgcttgtg cggcttcctg ctccctgcgt ttcaagcccg
     9541 aaacgtccat cacggcggca aacacttcgt tcatgttgcc gatatcgatc aaatcggccg
     9601 cttcttcgcg cgttaaatcc gggtaattgc gcttcagggc ggcgtgggcg caatcgataa
     9661 cggtagagat ttgtccggca tccgccgcat tgccgtcaaa tgagccgatg cgctcctgca
     9721 actgctccaa cgcgcccagc gcaataggcg gaatcacata atccgcgccg ttcagttcta
     9781 cggttacgcc tttaatccgt acggtcattt ttatttcctt gactttggtt gaataaaaaa
     9841 agccgccttt tcagacggca tataaacatt actcctgaat ccacagcgta ccgattttaa
     9901 agcccgcctc gtcggttgag gcggtaaagt cgatttcggg gacggagaag tcgtcgtttt
     9961 tagtcgagaa caagcccaat ttgccgctgg ttacgctttc cagttccaac agggcttttt
    10021 tgcctttgaa ctgcgtcagg tacctcatct taaacgtcgg cgtgttgccc gtcgccatat
    10081 tggtcagctc gattttcttc gccgggggca tcgtttgcgt ataggtaaag ctcggataaa
    10141 cggttttgcc tttatccgag ctgttaaagg cgtaaacgcc cgattccgaa accgtatatt
    10201 ggccttgttt cggggaggat gctactttga tataagccgt gccgtcctgg cccatcacgc
    10261 ccgcgtcctc agcgaacttg ccgccgccgg gcgcggctgc ctgaaggtaa gaataattgt
    10321 cgccatcgag gactttgccc gtagtttccg cccaaagcgc cttcatcgtg ccggttgcat
    10381 attccgtacc gaaaaacagg gtattgaggg tcaggccgtt aatcaacgcg cctttcattt
    10441 tgcccgacac cttgaccttg ccttgcgcca cagccaaagg ataacggttt tgaccgtaga
    10501 actctttcaa ttccgccgac aaatcgacgg acatttcctg caagcccata atccgcacgg
    10561 gcgttgcgtt ctgtacacgg ttgccgtaag catccgtaat catttgggcg aacacttcgc
    10621 cgctgccaaa cgtcaactgc atgacatccc tttcaaaaaa agccgcatta cgcggcgcaa
    10681 atcacaatcg gaataataca aaccgcctgt tcgccaagcg tcccctcgtc ggtttccacc
    10741 gtaccctcga cgcggcaata ctcgatatcc gcgccgtccg ccgttaaatc cgtcttgccc
    10801 gtaacggggt ggacggcgtt cacggcattg cacaccgcgt caatcagcgg attcatgacg
    10861 ggcgcgggcg gttggcccgc cgtctggacg tacaggtaaa catcggcgcg caaaatccac
    10921 ttggtctccc gccccgtcaa tgtcaacgcc tgcatatcgc cctgcgccat aaataacgcg
    10981 ggctgatcgt agcgtttcac atcgttccag tgcaccagct tccggctctt ggttacgaag
    11041 ccgtccaatg cgtccagctt cgcccacagc gcggaataaa ccgcctcacg attcatttca
    11101 acacctttcc aatcgatttt tgcaggtcgt ccgcgaactt cggcgtcaaa tcgcgcaatg
    11161 ccgaacggag gaacgaccgc tccggcaact tcacatcacg ggtatgggcg cggacgcgga
    11221 catatcgcgg cggtttcagc ggcttgccga acgcctgcct gacctggcgc agcgaagcct
    11281 taacgttgac actgcccgcg aaaccatact catgcgcgat gccgtaacgg acgttcgtat
    11341 cgacttcgcc cgaaacgaca ttgccggaaa cgttcacgcg ctgatgtacg gagcgtcgca
    11401 ggttccccgt ccttaccctc aacacccggc ccgataaccg gttcagcata acttcgcttt
    11461 gcagtcgcaa tgccgacctg cccaccgatt tgacgaccgc atcttgaaca tcggcggcat
    11521 atgctttaaa aaccgccgcc agaataccgc cgccgataaa ttccatcttc agcatcacac
    11581 gccctttcgt ttgtactcat tgagtatcgc aaacgccgac ggcggcatac cgccggaatt
    11641 accgaacgta gaaaaagcga cggtttcgcc tgcaagcgtc ttgctccgta cgcccttgcc
    11701 ctcgatttcg ttcacgcgct gcaccgcgat aatcatcacc gcttcgcgta tgtcggcggg
    11761 catgcgctca taaccggcgc ggtacgatac ctcgacattt ttcagcccgc gcgcgaaacc
    11821 ttcggggcgc atcagcagcc agttgtcaaa ctcccagccg ccggcatccg cgccgttgat
    11881 tttgacggac gacaccgaca ggacgggata attgtccaac acgatgcggt ctttgccgtt
    11941 gccgtcgtac cgcccgacat aatcggcggc caggaggctg cgcccgatat aggcttccgc
    12001 cgccgccgac acgccgtcaa tgacgctgag gaagaaatcg tcccgccggt catgttcaac
    12061 gccgatacgc tgcttgaact cctcaagcga taccggggcg gccatcgtta ttcagccttt
    12121 tcggcttcgg caggttcggc ttctgcttcg gcaggttcgg cagcttcggc ttcggcttcg
    12181 gcaggttcgg cagcttcggc aggttcggat tgtcctgccg gctgcccggt tttaggttta
    12241 cgcccgcgct tggctttttc aggcccttcg gcaggctcgg aggcaacgtt gccaaaaccg
    12301 aactgataca ggaattccgc cgcctccgac ggcacttcca cgataccgtt ttcatctgcc
    12361 gcgtagcttt ggctgccgaa ggaaacgtcg gtaaaccctt cgggcgcttt taatttgact
    12421 gtcatctcaa aatctccaaa agaaaaagcc gtctgatttt cagacggcat atcggcttaa
    12481 cccacgttgg taatcatacc gaaggcaggc atgaacatac cttgcagcac ctcgtccgca
    12541 tagacgccgt attcgtacat acgggtgcgc agcggccatt cgatttggta atactcttgg
    12601 cgcgtacgca cttgcagcag attgccgacg ccctgaacgt aggcgggcag gcggcttgag
    12661 tagaacaggt aagtaccggc aggcaggttc gggtgtacca cgatgttcag gtcgtcgccc
    12721 gtgatcttgt tcatatacga accgacaacg acaccggcgc ggatgttcgc cgtattgttc
    12781 acgtcaacgt tcaacttaat caacggcgcg ccgctgtttc cgataatcag cttggtcagc
    12841 gccgccaaat cgcgggcgtt gacgtagacg gtatcggggg acaggcggta tcgggtaaag
    12901 aaatgcgcga acgcctcttc aaattcatac acgccgcccg cgttgtcgga agtcaggccg
    12961 ccgcctttgt tgtccgacca gaacgcgccc gaatcaggca gggcgatttg ggtcaacagg
    13021 ccgtcaaatt ccaaaataga agtggaattg tcttcggacg gcagggaagc ggcggtctgg
    13081 gtaccttcgg catcagccga aatttccact ttggcggcag tggtaaccgc gcccagtttt
    13141 tcagaaccgg ccgcacccca gtaccaagca taggcaaccg cgccgcgaac agccggaatc
    13201 acggcggtta cttttttgcc tgcctcaata ccggaaacgg aagccgccgc agattttcgg
    13261 gcggaaccgc cgccgaacgt atcggttgta ccatccgcgt ttcggcgtgt gattttggca
    13321 gggacttggg cagttttaat gttcgggctt tgaccggttg caccgttgtt cgcgcctgcc
    13381 acatcccagt atgcctgcaa gcccaaagcc acacagatta cagacaaggt gctgacgccg
    13441 agtttgcccg ccgcgtcggc ggaaacgacg gcggtcggtg taggtgtaac gcctgccttc
    13501 aggctggtgt tgccgcccag caaaatcatt tcttcggcaa ccatagtagc ctgaagggtt
    13561 tgggcgaccg ccaacgcttt cacgtcctcg aaaccgcgcg cggcgtaatc cgcttcaaag
    13621 gttacttggt tttccaagcc gatggcgcgg aattgcgcgt tgcgttccac cgtttcgtga
    13681 ttgatgacgc cgccgcgcct gccttcgccg ataccggcgc gttggttgcc gacgttgata
    13741 ttcgtgacgg ctttccagtt cgagccgatg gcgcggccgc cgcccacgcg cgggatacgg
    13801 ttgcgcaacg gggtcaatac cgggtagagt ttttgagacg gcgcggaaag gtcataggtt
    13861 tgcaggccgg cggtaaagcc ggccggctgg gtaaaacctt tgtcaggcgg cccgccgccc
    13921 gcttgtgccg acttcatcag ttcaatcgtt tcttgtgtga gttggttcac gttcatttat
    13981 cgctcctgat aataaaaaaa ccgcctgtaa gcggtgttac agacggcctg tttgttttgc
    14041 cttaatgagt gtcgccacgt catccagcgt gccgtcattc tttacaatcg gctgaaaacc
    14101 ttttaacggg tcttcgccgt tatcttctgc cttactgata gctttcgtac tgcctttcgg
    14161 cggtactgcc tgtttcttca ggctttcgat ttccgcctgt gctttggcaa gggcgtcatt
    14221 cgattttttc agcgcgtctt gtgcctttgc cagttcgtca gccgattccg ctttggcaag
    14281 atcgcctgat ttgccggctt tggccgccaa accgtcggcc ggcttatcgg cttcgcttgc
    14341 cgccaacgct ttcagcgatt cggcaaggcc ggccgccgat tctttgattt gcgcggtaac
    14401 ggcttcatcg atgttgtcgt aggatgcgtc ctcaaccagc catttcagcg acatcaatac
    14461 atcagccggt gatttgactt ggtacattga tttggcggcc gtcccgcctt tcggcttgtc
    14521 ggctttagcc aataccgctt tcaaggcggc gatttcagat tcggacaatt cgacgcttgc
    14581 cgattttccg gcttcgtcct ttttgccggc gtccttatcg cctttatctt cggttttagg
    14641 ccctttatcg ccgtctttag gattttcatc ttcctcttcg gttggtttgt cagacggctt
    14701 gccgtcttta tccgccgccc ctgcctcatc tttcggtttg tccgccttaa agcaggtaaa
    14761 caccgcgtca ggattggcag ggcggtcgac aaggctgatt tccgtcagct tcaagcccgt
    14821 gatttgcgac ttgttcaaat catcgcgggc ggtaaccctg ccgccgatgg aaaagccttt
    14881 gtaaacgcct gtcttgactt tcgtcacggc aacagggtca acgatatgcg ccccgaaaaa
    14941 tgtgcgcccg tcgtcttcca cgttgatttc aatcgccgtt cccgccgcgt ttgagccgtg
    15001 catctcgcgc accgcgccga acttcatata atcgggaatc gccgccttca ttgcttccgc
    15061 cgcgacgact tcgccgtccg aatcgaccgc ttcgctcgag gcataccccc aaactttgac
    15121 cgtgccgtcg tcctgcgcct ccgtcttggc gatttgcgcg tataacttcg tcattggttt
    15181 gctccaaaaa aaagccgccc cgctaagggg cggcaaaaca cacccgcctg acccgaagga
    15241 atcaagattc aggcatatcc cctgccaaaa caggcacaac cgcgcaccgg cagttcggat
    15301 gaccgggtat cgtcaacgca ccgtgggaga aaggctcgtg caaaccgatt acgcccatcc
    15361 cgccgttggc attgcagaca tcggacacct tgtcgtcttt tgcggttatc cactgcttgc
    15421 cggcaaccag ccccgttcct tcccagccta tcaggttgcc cataccgtcc gccatcgccg
    15481 tttccgttcg ggcaatggtt cgggcgcgtg cgttgccgaa agcatgggat tctttcaggc
    15541 ggcctgccaa ttcctgcaca ctgtcgccgt ttcgcatggc ttcggctact tgggcgcgta
    15601 tcatttcgcg cgtcccttcg gtgatttgcc actcggcggc aggatttcgg acaagcccgc
    15661 cgcccgcccg cttcatgccg accatttcgg cggcgcgttc atgcgcccac ttgacggcgc
    15721 ggctgcgaat gttcgtaacc ataccggcgg caggttcagg cattacgcgc aacaaggcgg
    15781 caaccgcccc gtcttccgca acacgcctga ttatcggctc gaccacatcg gacaatcccg
    15841 accaatcgcc aaaatccaag ccgtttgcaa caacccctgc cgcgcggctc aattccgccg
    15901 ccaaatcccc ggcctgccaa tcgacggccg caccctcaat cagcgccgcg atttgttcgg
    15961 ccaagccgtc aatgcgtgtc agcaaataag cctcaataag cgcggcagat tcgtcttcgc
    16021 tcatcgggct ttccgacttt cccaactttt cagccccttg gttcggcggc tcttcgggct
    16081 ttcggccgtc ttgcttatcc ggttcaggct gcccctgccc cggtaacggc tccttgccca
    16141 gttcggcgcg gatttcgtcg gcggtcaaga tgcctgcgtt tttgtagatg gcgtagattt
    16201 cagcctgttc tttcgggttg agcgattcct cccccttcca gacaaactca tacgccgcca
    16261 tatccatgta acgggcaagc acgtcgtcaa tcagggcttt tacccagttt ttcaggctgc
    16321 ccatgccgtc tgaaagcgac tgctcgcggc tcgtctctgc cacgctgcgg tttacctgcg
    16381 ccacgaacgg cgtaggctcg acactaaacg caaagcagac gacacgcgcc agccattcgt
    16441 cgtaaacgtc cttcaacggc ggctgcttcg tctcgcggaa gtttcgggac aactcgcccg
    16501 gcacgaaacg cattttgcgc cgctgcgccg tttcgcccga cagcagcaaa tcccagtatt
    16561 cttgaaaccg cctgatgtcg tccgccgacc acgtttcagg cacgccgact aaagcatcgg
    16621 gcacgctgcc cgccgtgtag tattccagcg cgtgaacctg ccgttttagg gcgatattca
    16681 cggtcatgat gatttgctcg acgggcgaat agccgtaaac cttgtaactt cggttattcc
    16741 gcgaacggta aatcaactcg tcagccgtgt aatcgaccgc cgccatgccg tgcaggattt
    16801 gctgatacgc cgtatcgggc ggtaacggca tacgccccgt attgtccaaa acgcgcttaa
    16861 tcgtcgcccc gtccatcact tcgagggcgt acaagccgcc gcccagtgtt ttgcgcgggt
    16921 agatgcacgg cgcgtcaata acaaacaggt cttccagcaa gatgcgcagc cagtccgccc
    16981 acgtatgttc tttatcgggc gaccggaaga acgcaacggc ttcatcgacc tttcggtctt
    17041 tccgttgcga ttcgtcgtct tcggttgatt cgacgtcgcg cttttggatt gtccacttaa
    17101 ggcactccat ttggtcttta cgcgcctcga tcaccaaacg caatacatcg tagttgtcgg
    17161 caagggcgcg taattgcgca aagcctaccg cttcacgttc gcgcggcttg gaatgcccga
    17221 cgttgtagaa cggctcgtaa tcaaaccgcc gcccctctgc ctgctgcgcg gcaggggccg
    17281 gaggctcgcc cgcgtcgaac cacccgtccg cgttgccggt aaaggcgtaa cggacgccgg
    17341 cggcaacgcg ggcaataaag ccttgcgata aaggtgtctt tttactcatt tcacagcctc
    17401 gacctgcgat cgcaggaaat caatcatgcc cgtccgggta tccagcagct cgccaaacgc
    17461 acggcccaaa cagtctattt ggtcgtcatg ccggccgttc gggaacatgc gcatttccgc
    17521 aatcagcgcg tccgtgtccc atgtgccgtc gtccagcacc atcacattgc cgatgttgac
    17581 ctgtgccgcg aacggtccgg cgcgtgtaac cttgtcgccc gattcggggc cggcggatac
    17641 ggaaaaaccc gccaactggc gggttaggta tagtgtttgg gatttgcctg cctgaccggg
    17701 gtcttgcggg atggatattt tcgttttcac gccgtctttt tgcgccgtgt tgcgtaatat
    17761 cctgtcccgc tcgtccgcgc cgtaccggcc gcgcacgacg ttggcgatga tataccgccc
    17821 gtcttccgta acgccaagcc tgccgcctgc cgtgtagtcg ccgccgtttg cggttgaagc
    17881 caagtcccac gcgcgtaccc atctgatatt cccggcaggc aacgccttga caaattgcag
    17941 gttgtcaggc ttgaacgtac cgccgtcagg cggcgcaggt ttttgcaaat actgcccggc
    18001 aaacacatac ggcgcggcct gctccattcg gcgcaatgtt tcaatatcat gcttttcagg
    18061 ccacaacgcc gtgccgtctt cctgaatggc aggcaggcac aaatgctccc actcttcgcc
    18121 gttgccgccg tcaagcagcc agcccgccaa gtctttctcg tgcaggcgtt gcataatcag
    18181 gataatcggc gtgtcagggc tgttcttccg ggattcgacc gtgttttgaa accagtcgat
    18241 gacgttctgc cgcctgacct cgcttcgcgc ttcatctgct ttgtgcgggt cgtcaatgat
    18301 gatgcagccg ccgaatccct cccgatgcct gcccgcaccg aaacctgtaa tcgtaccgcc
    18361 cgcacctgtt gcgtacatca cgccgcctgc ggttgttttc cagtgatggc cgctttcgcc
    18421 tgccagtgcc aaatcaggaa aaatcgcccg atactcttcg tgttgcacca agttccgaat
    18481 ctgtacggag ttattgaccg ccagcgccgc cgaatagctc gcgtggataa actcgcaatc
    18541 aggcacgcgc cccatcgccc acgcgataaa gttcacgacc gcgatttccg ttttcgagta
    18601 tcgcggcgga atattgataa tcaggcgttt cgtttcgccg ttgaaaacac gctcgagcgc
    18661 gttgcagatt ggcgcatggt gattcgcccg ctgccaaaca tagccgcgcc tttgataaaa
    18721 catccggcgc gtgaacatat acaggcttgc agaacttaaa ctgcgaatta ctgatgtttc
    18781 aacatcgtcg aattgcccta gtgccatttc attctaactt cctttggaga aacggccata
    18841 cagcccctct tatgattagc gttttatgct aaaccctacg caaaacatct tccgctatct
    18901 tgcgatattc ctcagcatca agccgtacag ccgccctcat gctcccatcg cccgatttaa
    18961 cgtcaagctc cgatttgtcg ccgtatttct tcggcgcaat cttggaagcc gcccactttc
    19021 gggcatctat ctgcaatttc gcctttgaaa ccgccgcgct ctctgcttgt gcactatcgg
    19081 caatctcgat gatttcttca gcgaaatagt ccgcctgctt ttctctcgcg cgcgcgtatt
    19141 ggtggcgaaa ttcttcatta gcttccaacc aacggtaaat agttttcatt ggcggcacac
    19201 catcttcggc acatattgaa cgtaggcttc tgccatttgc gattttttcg catatcttat
    19261 cggccatgtc tttcgtgtaa tctgtcggac ggcctaattt gcgtttcgtg ccgctcataa
    19321 accctcctca aaaaagaaac cgtctaactc tgacccctct cagaattaga cggcaaacac
    19381 acactcgcca cataggaaaa acggaacgcc gctacctgta caggcagaag ctcaaattcg
    19441 gacagcctaa aacgcaaaaa cccgcacatt gttatgtacg ggcttaaaaa ttcatatcct
    19501 tcgggcgtgc gaaaatcccc gcaagggtaa cgatttgaat tatacaccta ttgccggaaa
    19561 aaacaacagg ccgtctgaag attcagacgg catttgtatt ccctactgca tcaaaccgcc
    19621 gacaggttgc ggatttcggg cagtatcggg cggatttttt ctgcgtgttc cgcgtcggcg
    19681 tgtgcgctta aggcttcgag ggcgtttgcg gcggctttga ggcggctgcg cgtttccgcc
    19741 cagaccgtcc acatcgtaac cgcctgcctg cagccgagct gcttcagcgg cagggaaacg
    19801 tctctgccca tttggatggc ccgcgcgccg tagctgacgg cgacggcgag gtcgtacagg
    19861 gcgttgccgc ttatgggcag ggcgggttgc ggcgcgggta acggttcgcg gtcgaggact
    19921 tcgcccgtca agcctgtgtg cagggtcagc gcgtggacgt aggcgacggc ttcgggcagc
    19981 ttcccggcgg ggatgccttc gacggattcg acgttgaagc gttggtgtac catactgtac
    20041 gcggaggagt agtctatgcc tttgcgtccg acaagtgcgg caacggcttg gcgcaatccg
    20101 gtacggtcgt cggcggtggt tttggcggac ttgatgccgt ctgaaaccgc caagaacgtt
    20161 tgaatcactt gcaaggcgaa tttcggtgaa atccacatcc cgtaggcaat aaccagttcg
    20221 cgacaaacaa aagtgccaag tctttgtttt gattgaatag acggttttcc gtctttttca
    20281 agttctttaa ttaaatcatt ggtttgtata ttttgaagcc agcggcgcgg tgcgtgtctg
    20341 tcttctccgc ctgaagcgcg gtgtaaatca ttcagactga ataagccgat ttcggtttga
    20401 tggatagaaa tattagagat ttgaactgaa ttgttcataa tgaagattcc tgtagaagtt
    20461 tacgaaatta gcccaaacgg gcgaccgcga ggttcgtaag ccttctacaa acaggctgtg
    20521 cttattccct gttgaacagg tattgtattc gcagccctcg cggtcaaaag taaacttcgg
    20581 ttgcgctatc gaaacaaaca accaaacaag gaaactttag acatgaaaaa atcacattga
    20641 cggagtgatt gccgttgtag aagaggttac gacacctcgt gagtgggaat ataaaacaaa
    20701 ccccctgcac atgcaagggg ttttgttacc ttatttgggt ttgcgtttaa aattctcgtc
    20761 atcacaacag aatcggtaag aatcaataac caaccaagca acgcgaagca gattttcagg
    20821 cgtatcaata ataacttgat tgcctgatac ctcaagtccg catcgttcga tattcgaaat
    20881 atccgactct tccaattcga tagggaagat tacagacggc ctttgtttgt tgtcaaaata
    20941 ccgtaatatc cacctgttac ttttaccatc aaccaatacg ccgaaatagc tttccgtatc
    21001 ttttgcctca atactcgcat catcaggaag aattgattta accaaatcaa acaaccttct
    21061 ttctgaataa gtggtaacga ttttattgtt ttcggggtcg ataatcggcg cggtcgggtc
    21121 ttcctgctcc ttctcaacag gggcggcctc ctcctgcact ttcggcgcac tcagtcccga
    21181 tacaaccatt gaactaaccg tattttgaac agcctgtttg acgatatgac ggatgctttc
    21241 caaatatcgt tgggtaaact gccgttgaat attcgccctt cccgccacat aacggacgaa
    21301 atccaaatcc acctctttca agctttctgt aattgattct gtaaatgccg tcaggtatat
    21361 gctttcttcc gcaaggcttc gcaatgcatc aggttgaaac ttgtcgtgcc tgaactgata
    21421 cagttgcgcc atatcatttt cattcaacat cgtaacatca acggtcaaaa acggctccga
    21481 atccataata ttcttgttgg acaaatcggt aaaaaatcgc cattcccggc cgttggtaat
    21541 cgcgcaaatg gctatttcag gcgtggcatt gaagtaacgc gacaactgcg gacaatgatt
    21601 ggacaaattt tcagtatatg attttgcttc gataaacata accggtgcgc cgttgcaaaa
    21661 caatgcgtaa tcgacccgct cccctgattt tgcacctggg aaatccgcct ggtattccgc
    21721 ccgaacctta ttcggatcga atgccgaaaa acctagaata tccaataaag gcaaaatcaa
    21781 agcctgtttt gtcgtctcct cggtagtaca gatatgtgca accttcttga catgttccgc
    21841 atgggaagca atccgttctt taaataccgc acttacagcc gccgcattca tgttaatctc
    21901 cttggttaaa tttgattggg caaattccca ccccattaag aagtgttaat tttcgcaatc
    21961 atagcgcaac cgaaaagaaa atcaaacctt ctcaaacagc aaatcaaaat catcccctgc
    22021 cgcctgccgt atcgccctat accacgcggc caagcccaaa tccgtctgca aatgcagggg
    22081 cccctcgccg cgccgcctga tttcagcctg caaacgttcc tcgtaggctg cctgcgactt
    22141 cgcaccgatg ccgaacgaaa tacggacggc ctcttgttgc ggcgcatcca ccttcgccca
    22201 tgcctgtaaa gtaagaaaca tggcatcttc gccgtatctc aagccgattt caggcttatg
    22261 cgggcaagct tcctccccca tataacggcc ttcgatactc aaacatctat ttaggctgcg
    22321 cgtatcacgg taacgacgct caaaagcacg cgccaagtcg ttcataaatt caaattcttg
    22381 ttgattcata gcttgattaa ccctttttca tgcaacaaaa ccaaagtccg cattacacct
    22441 tccgcgaagg ccgtctgaat ttccccttcc gcacaatccg ccaagcggtt ctatacatca
    22501 aaactcccaa atgattccaa attct
//
LOCUS       DAWXHA010000019        21736 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.019, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000019 DAWXHA010000000
VERSION     DAWXHA010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21736
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.019"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            310..822
                     /locus_tag="AABD07_000586"
     CDS             310..822
                     /locus_tag="AABD07_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HFB2355172.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            902..1981
                     /gene="aroB"
                     /locus_tag="AABD07_000587"
     CDS             902..1981
                     /gene="aroB"
                     /locus_tag="AABD07_000587"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HFB2355173.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIITNET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFIQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPARELSAGMAEVIKYGALGDIGFFEWLEQHMPELMALERAPLTQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAVEAEMGYGVWLHGEAVAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLAHMSHDKKVSGGIMRFIGL
                     NRLGEAVITEITDTDILRRTLQPYL"
     gene            2720..3562
                     /locus_tag="AABD07_000588"
     CDS             2720..3562
                     /locus_tag="AABD07_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HFB2355174.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLVDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGISLFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     DDRVAVISTLPLTRDESWSQLAVNELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
     gene            3591..4055
                     /gene="nrdR"
                     /locus_tag="AABD07_000589"
     CDS             3591..4055
                     /gene="nrdR"
                     /locus_tag="AABD07_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HFB2355175.1"
                     /translation="MKCPFCSHPDTRVADSRLMEERNTVRRRRHCPGCGKRFGTLETV
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     ISSSELVEIVLEELFGQNTEAAVRFAALHKRFDSPEHFASWLAQAVKTGGKT"
     gene            4087..5196
                     /gene="ribD"
                     /locus_tag="AABD07_000590"
     CDS             4087..5196
                     /gene="ribD"
                     /locus_tag="AABD07_000590"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HFB2355176.1"
                     /translation="MFSDTNISMMENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAKGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPPVAGKGLVLLKAAGIKTECGLLENKARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEEARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPPNSHLVTDGQSPTYIATLERDEDKLRPYREHAHIRILMPSETADGK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAENLADEIVLYRSPKILGGGKDLFSLP
                     ENRAALSAPPLWTPVSSEILGHDIKTVFRKNGNAF"
     gene            5391..6812
                     /locus_tag="AABD07_000591"
     CDS             5391..6812
                     /locus_tag="AABD07_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HFB2355177.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLFSAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTTVYALANLAAAAFLLFQNRCRLKAVRRAPFSPAVLHRGLRYGIP
                     LALSSLAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLLQSIFSTVWTPYIFR
                     AIEENATPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFTVVSCMLPP
                     LFYTLTEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGTRGAAVACAASFW
                     LFFVFKTESSCRLWQPLKRLPLYMHTLFCLASSAAYTCFGTPANYPLFAGVWAAYLAG
                     CILRHRKNLHKLFHYLKKQGFPL"
     gene            6980..8221
                     /locus_tag="AABD07_000592"
     CDS             6980..8221
                     /locus_tag="AABD07_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylgalactosaminyltransferase"
                     /protein_id="HFB2355178.1"
                     /translation="MSKAVKRLFDIIASASGLIVLSPVFLVLIYLIRKNLGSPVFFIR
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTPFGKKLRTASLDELPELWNVLK
                     GEMSLVGPRPLLMQYLPLYNKFQNRRHEMKPGITGWAQVNGRNALSWDEKFSCDVWYT
                     DNFSFWLDMKILFLTVKKVLIKEGISAQGEATMPPFAGNRKLAVIGAGGHGKVVAELA
                     AALGTYGEIVFLDDRTQGSVNGFPVIGTTLLLENSLSPEQFDITVAVGNNRIRRQITE
                     KAAALGFKLPVLIHPDATVSPSAIIGQGSVVMAKAVVQAGSVLKDGVIVNTAATVDHD
                     CLLDAFVHISPGAHLSGNTRIGEESRIGTGACSRQQTTVGSGVTAGAGAVIVCDIPDG
                     MTVAGNPAKPLTGKNPKTGTA"
     gene            8322..9527
                     /locus_tag="AABD07_000593"
     CDS             8322..9527
                     /locus_tag="AABD07_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HFB2355179.1"
                     /translation="MPSEPDGPNTMLNTALSPWPSFTREEADAVSKVLLSNKVNYWTG
                     SECREFEKEFAAFAGTRYAVALSNGTLALDAALKAIGIGAGDDVIVTSRTFLASASCI
                     VNAGANPVFADVDLNSQNISAETVKAVLTPNTKAVIVVHLAGMPAEMDGIMALAKEHD
                     LWVIEDCAQAHGATYKGKSVGSIGHVGAWSFCQDKIITTGGEGGMVTTNDKTLWEKMW
                     AYKDHGKSYDAVYHREHAPGFRWLHESFGTNWRMMEMQAVIGRIQLKHLPEWTARRQE
                     NAAKLAESLRKFKSIRLIEVAGYIGHAQYKFYAFVKPEHLKDDWTRDRIVSELNARNV
                     PCYQGGCSEVYLEKAFDNTPWRPKERLKNAVELGGTALTFLVHPTLTDDEIAFCKKHI
                     EAVLTEAAR"
     gene            9575..11485
                     /locus_tag="AABD07_000594"
     CDS             9575..11485
                     /locus_tag="AABD07_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HFB2355180.1"
                     /translation="MNLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSDEW
                     FDFANWQSFLLTALLTITLFIRMGLYRAVTRFVSFHVLTTAFAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSDHQKKTHDPVIIYGAGRSGRQLLEA
                     VKQMREYSAAAFVDDNPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPSATQEQ
                     RRRIISKLKAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDDRLMNAD
                     TEGKTVMVTGAGGSIGSELCRQIIRRRPERLLLFELSEFALYTVEKELCEYCARNGIA
                     AEILPFLGSVQNRTLLTHIMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVETFVLISTDKAVRPANTMGAGKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPITLTHPDITRYFMTIPEAAQLVIQAGAMGRGGDVFVL
                     DMGESVKITDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADETMLPWHELSALLDRIRTACDRYDQQAIRDLLVNAPTGFTPTGGICDL
                     LWVCETHRKNAV"
     gene            11541..12833
                     /locus_tag="AABD07_000595"
     CDS             11541..12833
                     /locus_tag="AABD07_000595"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HFB2355181.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFPNREYGWNLTVGNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHVEGRHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAIYCSRPTNPTGNVLTDGEMARLD
                     ALAREHGIPPIIDNAYGMPFPNIIDSGVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEAVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKPYDNV"
     gene            complement(12885..13721)
                     /locus_tag="AABD07_000596"
     CDS             complement(12885..13721)
                     /locus_tag="AABD07_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HFB2355182.1"
                     /translation="MIDLHCHSTVSDGMLPPAEVVRLAHQNGCTLLALTDHDHTGGIS
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLADVRKDRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIKNGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLADCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLADRFGLLASAGSDFHRLDDFSGGILGACPDLPENCKPVRAHFS
                     RH"
     gene            complement(14016..14219)
                     /locus_tag="AABD07_000597"
     CDS             complement(14016..14219)
                     /locus_tag="AABD07_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355183.1"
                     /translation="MDTTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRKKLKEAGWPDDAV"
     gene            complement(14197..14433)
                     /locus_tag="AABD07_000598"
     CDS             complement(14197..14433)
                     /locus_tag="AABD07_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HFB2355184.1"
                     /translation="MMEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRN
                     GGTEIRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            complement(14442..14639)
                     /locus_tag="AABD07_000599"
     CDS             complement(14442..14639)
                     /locus_tag="AABD07_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355185.1"
                     /translation="MCISVNADSSGNRICSLPLGRISLDGWRHTGFQTAFLRNRQCGH
                     IAGFAAILGAAAAGATITPSF"
     gene            14963..18397
                     /gene="dnaE"
                     /locus_tag="AABD07_000600"
     CDS             14963..18397
                     /gene="dnaE"
                     /locus_tag="AABD07_000600"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HFB2355186.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRGAGIKPVGAADVWIGNPNAPDKPFRAMLVIRNDAGYLRLSELLT
                     EAYVGQDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDTFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPSQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSLDDCLIKLSNEGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLSLDDAMKAQPQIQELLEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTAGDIVDVGKIPLDDQTAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPTKLGR
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDSSGQAEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            complement(19049..19671)
                     /locus_tag="AABD07_000601"
                     /pseudo
     CDS             complement(19049..19671)
                     /locus_tag="AABD07_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950989.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            complement(19659..19979)
                     /locus_tag="AABD07_000602"
     CDS             complement(19659..19979)
                     /locus_tag="AABD07_000602"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355187.1"
                     /translation="MRSQPEYGIAKENRPNRQADRFAGSVLPLAASLTHKPNIMKPIP
                     TDTFQPAILPQAFETEIKSTCTGRIYRIQTATLGEMQSEGYPVLFVLDGEAFFPRCTT
                     SCSR"
     gene            complement(20049..20592)
                     /locus_tag="AABD07_000603"
                     /pseudo
     CDS             complement(20049..20592)
                     /locus_tag="AABD07_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(20538..20765)
                     /locus_tag="AABD07_000604"
     CDS             complement(20538..20765)
                     /locus_tag="AABD07_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFB2355188.1"
                     /translation="MGQFMSVFRINMTAATVLAALSSPVFAAQTADLETVHIKGQRSY
                     NAIATEKNGDYSSLKAAIWMTASIPASPPAA"
     gene            20913..21572
                     /locus_tag="AABD07_000605"
     CDS             20913..21572
                     /locus_tag="AABD07_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HFB2355189.1"
                     /translation="MTPPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRALLEMPSEAAVADIARTYSAHYLNPNNRNMTLFPDAPPCLDKLKAQ
                     GFRLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGLCGELGLDPK
                     EALVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLGAPHLAVLDGLSELPGFLARHY
                     A"
BASE COUNT         4898 a         6685 c         5685 g         4468 t
ORIGIN      
        1 atccgctata gtattgataa acatattatc ttcaatatat tcaattggat aattgtttac
       61 ctaagcaaag ataattgcct tttcctgaca aattaagtga aatcaacgga ttgtcaaaac
      121 acagcctgaa ataaaaaacc tccctgattt cttttatttt tccttaaaat cagaaaagtt
      181 cgggatggtc gggttatttt tccaaacgta ccgccgccct gccgatttcg tataaaatcc
      241 cgccgtaacc cgacaagccc gaaccctgcc gccccgaaag gcgggggggt caaacattaa
      301 ggaaccgtga tgaaaaactt taacggcaaa ctcatcctca tcggactgat gggcgcgggc
      361 aaaactacgc tgggccggca aatggcgcag cggctggatt accgttttta cgacagcgat
      421 cacgaaatcg ccgcagcggc gggcgttccc atccccacca tatttgaaat ggaaggcgaa
      481 cagggattcc gttcgcgcga aaccgccata ctcaaaaaac tgattgtcct gccgcatatc
      541 gtcctgtcca ccggcggcgg cgcggtgtta aaagaagaaa accgcgccct tatccgcaaa
      601 agcggcacgg tcgtttatct gcacgccccg cccgaaaccc tgctcgaacg cacgcgctgc
      661 gacaacagcc gccctttgct gcaagttgcc gatcctttgg cgaaattgcg cgaactctac
      721 gccgcacgcg accccgttta ccgccaaacc gccgacttta ccgtagaatc ggcaaactgc
      781 cgggaaaccg tgcaaaccct gctcaaacgc ttatcccgat aaaccggcat atgcgccgct
      841 ccccgaaaac caaaccgcac cccgcccggc gggccggcgg ttcaaacttt aaggaacaac
      901 aatgaaaaca ctgaccgtac acacgccttc gcacagctac cccatcttta tcggcaacgg
      961 gctgctgccg caggcgggaa gcctgctcaa accgcatttg ggcaaacgcg ccgccatcat
     1021 caccaacgaa accgtcgccc cgctctacct cggcacgctt cagacggcat tggatgcggc
     1081 aggcgtatcc catttcagca tcatcctgcc cgacggcgag gcgcacaaaa actggcagac
     1141 gctcaacctc atctttgacg ggctgatgca aaaccgcgcc gaacgtaaaa ccacgctgat
     1201 tgcgctgggc ggcggcgtga tcggcgacat ggtcggcttt gccgccgcca cctaccagcg
     1261 cggcgcgccg ttcatccaaa taccgaccac gctgttgagt caggtcgact catcggtggg
     1321 cggaaaaacc gccatcaacc acccgctcgg caaaaatatg atcggcgcgt tttaccagcc
     1381 gcaggcggtg cttgcagatt tggacacgct gcacaccctg cccgcccgcg aactgtccgc
     1441 cggtatggcg gaagtcatca aatacggcgc gctcggcgac atcggctttt ttgaatggct
     1501 ggaacagcat atgcccgaac tgatggcact cgaacgcgcg cccctcaccc aagccgtgta
     1561 ccgctgctgc caaatgaagg cagacatcgt cgcccaagac gaaaccgaac agggcatacg
     1621 cgcatggctc aacctcggac acaccttcgg acacgccgtc gaagcggaaa tgggttacgg
     1681 cgtatggctg cacggcgagg ccgttgccgc cggctgcgtg ttggcggcgc gtttgtccga
     1741 acaactgggc aaaacctccg ccgcagatac cgcgcggctc gccgccctgc tcgaagccgc
     1801 cggactgccg tccgcaccgc ccgtgtttgc ctttgaaaaa tggctggcac atatgagcca
     1861 cgacaaaaaa gtcagcggcg gcatcatgcg ctttatcggt ctgaaccggc tgggcgaagc
     1921 cgtcatcacc gaaattaccg acacggacat cctccggcgc accctgcaac cgtatctctg
     1981 atttcctctg ccgatgtgtt gccgcgcggg tttgacgcac gatgatgact ttccatcatc
     2041 attctccgcg aaagcgggca tccggttatt ccatattgca gggatttatc cggaataacg
     2101 acaacctgtc cgccgtcatt tccgcgcaga tggaaatttg gaaattcaaa atcacaggaa
     2161 tttatccgga atatagcgga ttaacaaaaa tcaggacaag gcggcgaagc cgcagacagt
     2221 acaaatggta cggaaccggt tcgcccggtg cttgggcgcc ttagggaacc gttccctttg
     2281 agccggggcg gggcaacgcc gtaccggttt ttgttaatcc gcaacagcaa ccctgtcgcc
     2341 gtcattaccg cgaaagcggg aatccagtcc gttcagtttc ggtcatttcc gataaattcc
     2401 tgttgctttt catttctaga ttcccacttt cgtgggaatg acggcggaag ggttttggtt
     2461 ttttccgata aattcttgag gcattgaaat tccagattcc cgcctgcgcg ggaatgacgg
     2521 ctcaaaagtt acggaacgaa aaacaaccga aaccggacaa gtcggattcc cgcctgcgcg
     2581 ggaatgacgg aatcttaagt ttccgtcttt gttttctgtt ttcgcgggaa taatggggaa
     2641 caagccgtat ttcagacggc attttcagtt cggggtataa tccgaatact tgcgaccatc
     2701 tgaatcattt ggacaaacta tgtgtcaact gctgggcatg aactgcaata cgccgaccga
     2761 tattatgttt tcctttgaag gcttccgccg caggggcggc attaccgacc atcacgccga
     2821 cggtttcggc atcggctttt tcgaaggcaa aggcgtgcgc ctgttccatg acgacaagcc
     2881 gagtgcaaat tcccccgtcg ccgacctcgt gcgcgcctac cagattaaat cggaaaacgt
     2941 cgtcgcccac atccgcaaag cctcgcaagg tcaaacctcg ctggcgaaca cccatccctt
     3001 tatgcgcgaa atgtggggcg gctactggct gtttgcccac aacgggcatt tggtcgattt
     3061 tttccccgaa cagggagaat ttttccaccc cgtcggcaca accgattccg aacgcgcgtt
     3121 ctgccacatc ctcaaccgcc tgcgcacccg ctttgccgcc cgtcccgacg acgacacgct
     3181 gtttgacgcg attgcggggc tgacgcacga aatccgcaag ttcgggctgt ttaacttcat
     3241 gctttcagac ggcatttccc tgtttgccca cgccagcacg ctgctgcact acatcgtccg
     3301 ccaagccccg ttcggcaaag cgcgcctgct cgacgacgat gtaatggtcg attttgccga
     3361 agtaaccacg ccggacgacc gcgtcgccgt tatctccacc ctgccgctga ctcgcgatga
     3421 atcgtggtcc caacttgccg tgaacgaact ggtcatgttc cgcgaaggca acatcgtccg
     3481 gcacgaccgt cccgaaaatc ccgtctatat gagtgccgaa gaaggcctgg aaatcgcccg
     3541 cgccgccggc gtatcggttt gacgttcaga cggcatcagg aagaaacacc atgaaatgcc
     3601 cgttttgcag ccacccagac acccgagttg ccgattcccg cctgatggaa gagcgcaata
     3661 ccgtccgccg ccgccgccac tgccccggct gcggcaaacg cttcggcacg ctcgaaaccg
     3721 tcgaactcaa aatgcccgcc gtcatcggtc cggacaagaa acgttcgccc ttcaatgcac
     3781 aacgcctccg caacgacctg accgccgccg cccgaaaatc cgccctgaca cccgaacaga
     3841 ttgacgaaac cgtccgcctg acggaacaca ggctctacac ttcgggtcag cgcgacatat
     3901 cctcatccga acttgtcgaa atcgtgctgg aggagctgtt cgggcaaaac acggaagccg
     3961 ccgtccgttt cgccgccctg cacaaacgct tcgacagccc ggaacatttc gcctcgtggc
     4021 tggcgcaagc cgtcaaaaca ggcggcaaaa cctgattccc ccaacccata ctgatacggt
     4081 atccctatgt tttcggacac aaatatatcc atgatggaaa acgccctccg acttgccgct
     4141 ttggggcgtt tttccacttc acccaacccg cgcgtcggct gcgttatcgc acacggcaga
     4201 caaattgtcg gacagggctt ccacgtcaaa gcgggcgaac cccatgccga agtccacgcc
     4261 ctgcgtcagg cgggggaaat ggcaaaaggc gcgaccgcct ttgttaccct cgaaccgtgc
     4321 agccattacg gacgcacacc gccctgcgcc gaagccctgc tccgttccgg cgtaacacgc
     4381 gtcgtcgccg ccatgcgcga ccccaacccg ccggttgcag gcaaagggct tgtcctgctc
     4441 aaagcagcgg gcatcaagac ggaatgcgga ctacttgaaa acaaagcacg cgaactcaac
     4501 cggggatttt tatcgcgcat cgaacgccgc cgcccctttg tccgcctcaa atgcgccgtt
     4561 tcgctggacg gcaaaaccgc cctttcagac ggcagcagct tttggattac cggcgaggaa
     4621 gcgcgtgccg acgtacaggt tttgcgtgcc gaaagctgcg cggtgctgac cggcatcggc
     4681 acggtgttgg cagacaatcc ccggctcaac gtccgcgctt ttccaacttt gcgccaaccc
     4741 gcacgcatcg ttttagacag ccgcctgcgc ctgcccccga acagccattt ggttaccgac
     4801 ggacaatctc cgacctacat cgccaccttg gaacgcgatg aagacaaact ccgcccctat
     4861 cgggaacacg cacacatccg catcctgatg ccgtctgaaa cggcagacgg caaaatcgac
     4921 ctgcaccatc tgatgcgcct ccttgccgac gaaggtttcg gcgaaatcat ggtcgaagca
     4981 ggctccgaac tcacatccgc atttttggcg gaaaatttgg cggacgaaat cgtgctgtac
     5041 cgttcgccca aaatcctcgg cggcggcaaa gacctgtttt ccctgcccga aaaccgtgcc
     5101 gccctttccg caccgccctt gtggacaccc gtttcaagcg aaatcctcgg acacgacatc
     5161 aaaaccgtgt tccggaaaaa cggcaacgcc ttttaaaggg tttgccgccg ttttgctata
     5221 taataacgcc gataaaaaac ggcccgttca gaccgccgcc cgcccggaaa agcgcaaccc
     5281 ggactgccgc accccgccgg cagccgcgac ggcctgaaag ccgtcaaatt ccgatcaaga
     5341 aaggcttcag acggcacagg cagcatcacg ccgccgcccg gacatcaaaa atggacacaa
     5401 aagaaatcct cggctacgcg gcaggctcga tcggcagcgc ggttttagcc gtcatcatcc
     5461 tgccgctgct gtcgtggtat ttccccgccg acgacatcgg gcgcatcgtg ctgatgcaga
     5521 cggcggcggg actgacggtg tcggtattgt gcctcgggct ggatcaggca tacgtccgcg
     5581 aatactatgc cgccgccgac aaagacactt tgttcaaaac cctgttcctg ccgccgctgc
     5641 tgttttccgc cgcgatagcc gccctgctgc tttcccgccc gtccctgccg tctgaaatcc
     5701 tgttttcgct cgacgatgcc gccgccggca tcgggctggt gctgtttgaa ctgagcttcc
     5761 tgcccatccg ctttctctta ctggttttgc gtatggaagg gcgcgccctt gccttttcgt
     5821 ccgcgcaact cgtgcccaaa ctcgccattc tgctgctgtt gccgctgacg gtcgggctgc
     5881 tgcactttcc ggcgaacacc gccgtcctga ccaccgttta cgcgctggca aaccttgccg
     5941 ccgccgcctt tttgctgttt caaaaccgat gccgtctgaa ggccgtccgg cgcgcgccgt
     6001 tttcgcccgc cgtcctgcac cgggggctgc gctacggcat accgctcgca ctgagcagcc
     6061 ttgcctattg ggggctggca tccgccgacc gtttgttcct gaaaaaatat gcgggcctgg
     6121 aacagctcgg cgtttattcg atgggtattt cgttcggcgg ggcggcatta ttgctccaaa
     6181 gcatcttttc aacggtctgg acaccgtata ttttccgtgc aatcgaagaa aacgccacgc
     6241 ccgcccgcct ctcggcaacg gcagaatccg ccgccgccct gcttgcctcc gccctctgcc
     6301 tgaccggaat tttctcgccc ctcgcctccc tcctactgcc ggaaaactac gccgccgtcc
     6361 ggtttaccgt cgtatcgtgc atgttgccgc cgctgtttta cacgctgacc gaaatcagcg
     6421 gcatcggttt gaacgtcgtc cgcaaaacgc gtccgatcgc gcttgccacc ttgggcgcgc
     6481 tggcggcaaa cctgctgctg ctggggcttg ccgtaccgtc cggcggcacg cgcggcgcgg
     6541 cggttgcctg tgccgcctca ttctggttgt tttttgtttt caagacagaa agctcctgcc
     6601 gcctgtggca gccgctcaaa cgcctgccgc tttatatgca cacattgttc tgcctggcct
     6661 cctcggcggc ctacacctgc ttcggcacac cggcaaacta ccccctgttt gccggcgtat
     6721 gggcggcata tctggcaggc tgcatcctgc gccaccggaa aaatttgcac aaactgtttc
     6781 attatttgaa aaaacaaggt ttcccattat gaaaatcatc ctgactactt ctatgtcggt
     6841 tctgggaggc acgggcacga catcatcgat tgccaaatgt cgtgcaaaac cgaccccgtt
     6901 cagtccgacg aaatcgtccg ccgcttcagg cgcgacattt cctatcggaa aatcgtcaac
     6961 ctgattgaaa gattggcaaa tgagtaaagc cgtcaaacgc ctgttcgaca tcatcgcatc
     7021 cgcatcgggg ctgattgtcc tgtcgcccgt gtttctggtt ttgatatacc tcatccgcaa
     7081 gaatctgggt tcgcccgtct tcttcattcg ggaacgcccc ggaaaggacg gaaaaccttt
     7141 taaaatggtc aaattccgtt ccatgcgcga cgcgcttgat tcagacggca ttccgctgcc
     7201 cgacagcgag cggctcacgc ccttcggcaa aaaactgcgc accgccagtt tggacgaact
     7261 gcctgaactg tggaacgtcc tcaaaggcga gatgagcctg gtcggccccc gcccgctttt
     7321 gatgcagtat ctgccgcttt acaacaaatt tcaaaaccgc cgccacgaaa tgaaaccggg
     7381 cattaccggc tgggcgcagg tcaacgggcg caacgcgctt tcgtgggacg aaaagttctc
     7441 ctgcgatgtt tggtacaccg acaatttcag cttttggctg gatatgaaaa tcctgtttct
     7501 gacagtcaaa aaagtcttga ttaaagaagg catttcggcg caaggggaag ccaccatgcc
     7561 ccctttcgcg gggaatcgca aactcgccgt tatcggcgcg ggcggacacg gcaaagtcgt
     7621 tgccgagctt gccgccgcac tcggcacata cggcgaaatc gtttttctgg acgaccgcac
     7681 ccaaggcagc gtcaacggct tccccgtcat cggcacgacg ctgctgcttg aaaacagttt
     7741 atcgcccgaa caattcgaca tcaccgtcgc cgtcggcaac aaccgcatcc gccgccaaat
     7801 caccgaaaaa gccgccgcgc tcggcttcaa actgcccgtt ctgattcatc ccgacgcgac
     7861 cgtctcgcct tctgcaataa tcggacaagg cagcgtcgta atggcgaaag ccgtcgtaca
     7921 ggccggcagc gtattgaaag acggcgtgat tgtgaacact gccgccaccg tcgatcacga
     7981 ctgcctgctt gacgctttcg tccacatcag cccgggcgcg cacctgtcag gcaacacgcg
     8041 tatcggcgaa gaaagccgga taggcacggg cgcgtgcagc cgccagcaga caaccgtcgg
     8101 cagcggggtt accgccggtg caggggcggt tatcgtatgc gacatcccgg acggcatgac
     8161 cgtcgcgggc aacccggcaa agccccttac gggcaaaaac cccaagaccg ggacggcata
     8221 agcgattaaa ataaacttcc gtacaaaccg attttgacaa cacctgcggc gcgcgcccga
     8281 ttcttcggaa cacgccccct tcagacggca tagggtcgga aatgccgtcc gaacccgacg
     8341 gaccaaacac catgctgaac accgcccttt ccccatggcc gagcttcacc cgagaagaag
     8401 ccgatgccgt ttccaaagtc ctgctgtcca acaaagtcaa ctactggacg ggcagcgaat
     8461 gccgcgaatt tgaaaaagaa tttgccgcct ttgccggcac gcggtacgcc gtcgcccttt
     8521 ccaacggcac gcttgcgctc gatgccgcac tcaaagcaat cggcataggc gcgggcgacg
     8581 atgtgattgt tacctcgcgc accttcctcg cctccgcctc ctgcattgtg aacgcgggcg
     8641 caaaccccgt gtttgccgac gtggatttga acagccaaaa catcagcgcg gaaaccgtca
     8701 aagccgtgct gaccccgaat accaaagccg tcattgtcgt ccaccttgcc ggtatgcctg
     8761 ccgaaatgga cggcatcatg gctttggcaa aagaacatga tttgtgggtg attgaagact
     8821 gcgcccaagc gcacggcgcg acctacaaag gcaaatccgt cggctctatc gggcacgtcg
     8881 gcgcgtggtc gttctgtcaa gacaaaatca tcaccaccgg cggcgagggc ggtatggtta
     8941 cgaccaacga caaaaccctg tgggaaaaaa tgtgggcgta caaagaccac ggcaaaagct
     9001 acgatgccgt gtaccaccgc gaacacgcgc ccggtttccg ctggctgcac gaaagtttcg
     9061 gcaccaactg gcgcatgatg gaaatgcagg ctgtcatcgg ccgcatccag ctcaaacacc
     9121 tgcccgaatg gacggcgcgc cgccaagaaa acgccgccaa gctggcagaa agtttgcgca
     9181 aattcaaaag catccgcctg attgaagtcg ccggctacat cggacacgcg caatacaagt
     9241 tctacgcctt cgtcaaaccc gaacacctga aagacgactg gacgcgcgac cgcatcgtca
     9301 gcgaactgaa cgcgcgcaac gtcccctgct atcaaggcgg ctgctccgaa gtgtatttgg
     9361 aaaaagcctt cgacaacacg ccgtggcggc ccaaagagcg gctgaaaaac gccgtcgaac
     9421 tgggcggcac cgccctgacg ttcttggtgc acccgacgct gaccgacgac gaaatcgcgt
     9481 tctgcaaaaa acacatcgaa gccgtcctga ccgaagccgc acgataaccc ttcagacggc
     9541 atatgccgcc tgaaagcaca taccgcccca cgatatgaat ctggaaaccc tgatcgccct
     9601 gccgcgcaac atcaagaaaa tctgtttcct catacacgat tttctgatga ttttcattgc
     9661 cttttggttc acccaaagcc tgaaggccga ctactcggac gaatggttcg attttgccaa
     9721 ctggcagtct tttttgctga ctgccttgct gaccatcaca ttatttatcc gaatggggct
     9781 ttaccgcgcc gttacacgct ttgtcagttt ccacgtcctg accaccgcct ttgccggcag
     9841 cctcgcctcc gccgtattgt tcttcctcaa cacattgatt tttgaagaaa ggctgcgcct
     9901 cgccctgccg attgtctatt tcttactgct gtttgtttcc gtgaccggct cgcgtatggt
     9961 tttgcgcgga ctcctgtccg accaccagaa aaaaacacat gaccccgtca tcatttacgg
    10021 cgcggggcgt tcgggtcggc agctccttga agccgtcaaa cagatgcgcg aatattccgc
    10081 cgccgccttt gtggacgaca accccaagct ttggcacacc gtcatctacg accttgccgt
    10141 ttaccagccc gatgccatcg ccttcctcat cgaacgctac ggcgtggaaa aaatcctgct
    10201 cgccattccc agcgcgactc aggaacaacg ccgccgaatc atcagcaaac tgaaagccta
    10261 tccgtgcgaa gtgttgacca ttcccggaat gaaagacctg atggacggga aaatcagcat
    10321 cggcacgctc aaaaaaatct ctgtgtccga cctgctcggg cgcgattccg tcgcacccga
    10381 cgaccgcctc atgaatgccg acaccgaagg caaaaccgtc atggtaaccg gcgcgggcgg
    10441 ctccatcggt tcggaactct gccgccagat tatccgccgc cgccccgaaa ggctgctgct
    10501 gttcgagctg tccgaattcg ccctgtacac cgttgaaaaa gaattgtgcg aatactgcgc
    10561 ccgaaacggc atcgccgccg aaatccttcc ctttttgggt tcggtgcaaa accgcacgct
    10621 gctcacgcac attatgaccg ccttttccgt tgcgaccgtc tatcacgccg ccgcctacaa
    10681 acacgtccct atggtcgagt tcaacaccgt cgagggcata cgcaacaaca tcttcggcac
    10741 actcgaatgc gcgcttgccg ccacggcttc gggcgtggaa accttcgtcc tcatctccac
    10801 cgacaaagcc gtccgccccg ccaacacgat gggtgcgggc aaacgcatgg cggaactctg
    10861 ccttcaggca ctcgccgccg aacccggaca aaaaacccgc ttcagcatgg tacgtttcgg
    10921 caatgtttta ggctcgtccg gctccgtcgt cccgctgttt gaaaaacaga ttgccgaagg
    10981 cggccccatc accctgaccc accccgacat cacgcgctat ttcatgacca tacccgaagc
    11041 ggcgcaactg gttatccaag ccggcgcgat gggcagaggc ggcgacgtgt tcgtcctcga
    11101 tatgggcgaa tccgtcaaaa tcaccgacct tgcccgccaa atgattacct taagcggact
    11161 caaacccaaa acgcccgaac agcccgacgg cgacatcgaa atcctcatta ccgggctgcg
    11221 ccccggcgaa aaactctacg aagagttgct catcggcgac aacgtccgca aaaccggcca
    11281 tccgcgcatc atgaccgccg acgagaccat gctgccgtgg cacgaactct ccgccctgct
    11341 cgaccgcatc cgcaccgcct gcgaccgtta cgaccagcag gcaatccgcg acctgctcgt
    11401 caacgccccg accggcttta ccccgaccgg cggcatctgc gacctgcttt gggtatgcga
    11461 aacacacaga aaaaatgccg tctgaacctt cagacggcat accgtacaaa ccaatctgcc
    11521 ttacacacac tgagtttgac atgcagttct cggcattcgg cgaaaaattc acgcaacaca
    11581 gcggcatcct gcaactgatg gacgacctcg gcgacgcgct caaaagcgac aagcccgtca
    11641 atatgctcgg cggcggcaac ccggcgcgca ttcccgaaat cgatcgggcg ttcgccgaca
    11701 tattttccaa gctggcggcg gaacacgccg tcgagaacat cggcaactac tccaatcccc
    11761 aaggcgatgc cgcgctgatt gacgcgctga ccgccttccc caaccgcgaa tacggctgga
    11821 acctgaccgt cggcaatatc gcgctgacca acggttcgca aaacgcgttt ttctatttat
    11881 tcaacctctt cggcggcaaa ttcaagcttt cagacggcac atccgcagaa aaagccattt
    11941 tgttgccgct cgcgcccgaa tacatcggct atgccgacgt gcatgtcgaa gggcggcact
    12001 tcgtttccgt caaacccaaa atcgaaaacg tcgaacacga aggcgaagca ggcttcttca
    12061 aataccgcgt ggactttgac gcactggaaa acctgcccga actcaaagcg ggcaaaatcg
    12121 gcgcgattta ctgttcgcgc ccgaccaacc cgaccggcaa cgtgttgacc gacggcgaaa
    12181 tggcgcgttt ggacgctttg gcgcgtgaac acggcattcc gccgattatc gacaacgcct
    12241 acggaatgcc gttccccaac attattgaca gcggcgtaac gctgaattgg cacgaaaaca
    12301 tcatcctctg cttcagcctt tccaaagtcg gcctgccggg cgttcgcacc ggcatcatcg
    12361 tcgccgcgcc cgaagccgtc aaagccgtca gcagcctgaa cgcgattgtg aaccttgccc
    12421 ccacgcgctt cggcgcggcc atcgccgccc cgctgctgga aagcggcgag atgaaacggc
    12481 ttgccgacca agtcatccgg ccgttttacc gcaatcaggc gcaaaccgcc gtttcgctgc
    12541 tcaagcgcga gctgggcgcg tacccgatga aaatccacaa acccgaaggc gcgattttcc
    12601 tgtggctctg gtttgaaaac ctgcccgttt cgtcgcaaac cctgtacgaa atgctcaaag
    12661 ccgaaggtac gctgattatt ccgggcgaac atttcttcgt cggcatcgac acgcaagact
    12721 acccgcacgc gggcgagtgc atccgtatga gtatcgcaca ggacgctcaa acgctggaaa
    12781 aaggcatcgc cgccatcggc aaaaccgtcc gaaaaccgta cgacaacgtt taaaacgcaa
    12841 aaaatgccgt ctgaagacct ttcagacggc attttcatcc gcattcaatg tcgggaaaaa
    12901 tgcgcccgca ccggtttgca gttttccgga agatcgggac acgcgccgag gatgccgccg
    12961 ctgaagtcgt ctaaacggtg gaagtcgctg cccgcgcttg ccaacaatcc gaagcggtct
    13021 gccaaaagcg cgtagttgag gcggtcgttt ttgcagcagt tgccgctgtg gacttcgatg
    13081 cccgcgccgc cgaggttttt aaattcttca aacaggttgc gcttggcggt tgccgacaaa
    13141 tcataacgca tcggatgggc aatcaccgcc atgccgcccg cgccgttgac ggcggagacg
    13201 cagtctgcca gcgtcgccca ttcgtggcgt accgcgcagg atttgccgtc gcccaagtat
    13261 ttggtgaacg cctgctgctt gtttttgacg tgtccgtttt tgatgaggaa ctcggcgacg
    13321 tgggtgcggc tgaccatttc tttgtttgcc gccagcgcca gcgcgccgtc gtatgcgccg
    13381 ccgatgcctt tcttttcgag cttggcggcg atggcttcaa gacgtttcag acggtctttg
    13441 cggacatctg ccaacaggtt ttgcaggttt tcgtcctgct cgtcgaaatc caaaccgaca
    13501 acgtgtatgg tacgcccgcg ccacgttacc gaaatttcca cgccgttaat caggcgcaaa
    13561 ccgagcctgt cggcttcggc acgcgcttcg gagatgccgc ccgtgtggtc gtggtcggtc
    13621 aacgccagca gcgtgcagcc gttttgatgt gcgaggcgga cgacttcggc gggggggagc
    13681 ataccgtcgg aaacggtgga atggcagtgc aggtctatca tggggtgtta tgtggtggtg
    13741 aatgaaggac gggatgtttc aatgttgtcg gacagtgtgg cggcggcggt cattttaaaa
    13801 aacaggtgta tggcaaatgc aaaggaaaag ccgctatgcc gtcattcccg cgcaggcgag
    13861 aatccagact ttgatttatt ggaaatgttt aaggttaacc gctatttcaa acttccggat
    13921 tcctgctttc gagggaatgg cgatatgaac gttttcaatt ttaatctact ataaaagacc
    13981 gtctgaaaac gtggttttat caagcccaac cgttttcaga cggcatcgtc cggccaaccc
    14041 gcttccttca gttttttccg ttgcgcatcg tagcgtgcct tgtccgccca gtaaatcgtc
    14101 tgaatgcacg cctcgccgca gtcgctgccg cagcattccc acgactcggg gcggacgggt
    14161 tcgtccaaaa gcggctcgcc caaaagggct tcggctttat gcttcagggt cgtatccatc
    14221 ggcgatttcc aagcgcgcgc cgtcaaactc gatgacttct ccgccgcgta ttttggccgt
    14281 tttgcggatt tcggttccgc cgttgcgcaa caccagccct tcggcgataa atgcttttgc
    14341 ctgtccgccg ctttcggcaa gtccggccaa tttcaagagg tcgcacaagg cgatgtattc
    14401 gttgtcttcg agatagacgg tggcttccat aatgtcccct tttagaaaga gggcgttatt
    14461 gtagcacctg ccgccgccgc acccaaaatt gccgcaaaac cggcgatgtg tccgcactgc
    14521 ctgttccgta aaaatgccgt ctgaaacccc gtatgccgcc atccgtccaa agaaatcctg
    14581 cccaacggca ggctgcaaat cctgttcccc gacgaatccg cattgacgct gatgcacatc
    14641 ctcaaacgcg gactgcccga tacaccggca atcggcatca aaacgaaatc aaaaacctgt
    14701 ttgaacgtaa aatctattta actgcttgcc gtccgtccga ataaggtata tagttcctta
    14761 taactatttt gatagtcctt tatatctatc aatactcctt gggaagcctc cgccacacgg
    14821 caggaggcat ttttttgccg tcgtaaaagc tcaaaaaaca tttgcaggtc atgccgtctg
    14881 aatccgaaac ggcattacct gcaccgccat ctaaagacaa ccctgctaca atacgccttt
    14941 tattgtccac gccgattttg ccatgaccga gccgacctac atccccctgc gcctgcatac
    15001 cgaattctcc attaccgacg gtatggtgcg gattaaaaaa ctgattgcca aagcgcaaga
    15061 atacggtttg cctgctttgg gcatcagcga tttgatgaac gaattcggtt tggtgaaatt
    15121 ctataaagcc tgccgcggcg cagggattaa gcccgtcggc gcggcggacg tgtggatagg
    15181 caatccgaat gcgcccgaca agccgttccg cgccatgctg gttatccgca acgatgcggg
    15241 ttatctgcgc ttgagcgagc ttttgacgga ggcttatgtc ggccaagacc gcaatatcca
    15301 tcatgcggaa ctcaatcccg aatggctgga aaacggcgac aacagcggct tgatttgttt
    15361 gagcggcgcg cattacggcg aagtgggcgt gaatctgttg aacggcaatg aagacgcggc
    15421 gcgtgcggcg gcgttgaaat atgcggcatg gtttcccgat acgttttatt tagagctgca
    15481 acgcctgccc gaacgccccg aatgggaggc ttgcgtttcc ggcagcgtga agctggcgga
    15541 ggaactgggt ttgccggtgg tagcaacgca tccgacacag tttatgaacc gcgacgattt
    15601 caacgcgcac gaggcgcggg tgtgcatcgc gggcggctgg gtgctgacgg acaagaaacg
    15661 tccgcgcgat ttcacgccga gccagttttt cattccgccg gaaacgatgc tggagcgttt
    15721 cgccgacttg cccgaagcct tggaaaacac ggtggaaatc gccaaacgct gcaacttgca
    15781 catcacattg ggcaaaaact tcctacccct tttccccacg cccgacggtt tatcactcga
    15841 tgactgtctc atcaaactct ccaacgaggg tttgcaggaa cgcatggttc agctttatcc
    15901 cgacgaggcg gaacgggcgg caaaaatgcc ggaatatcag gagcggctgg actttgagct
    15961 gaacatcatc atccaaatga aattccccgg ctatttcctt atcgtacaag actttatcaa
    16021 ctgggcgaaa acgcacggct gtccggtcgg gccgggacgc ggttcgggcg cgggttcgct
    16081 ggtggcgtat tcgctgaaga ttaccgacct cgacccgctg aaatacgcgc tgctgttcga
    16141 gcgtttccta aaccccgaac gcgtttccat gcccgacttt gacgtggact tctgtcaggc
    16201 aaaccgcggc cgcgtgattg aatacgtgcg cgaaaaatac ggcgctcagg cggtcagcca
    16261 gattgtgact ttcggcacga tgtcgtccaa agcggtcatc cgcgacgtgg ggcgtgtgct
    16321 ggaactgccg tttatgctgt gcgacaaact gtccaagctg attccgttgg aagccaacaa
    16381 acccctgagt ttggacgacg cgatgaaggc gcagccgcag attcaggaat tgcttgaagc
    16441 ggaagaagcg gacgaactga ttacgctggc gaaaaaactg gaagacctga cgcgcggttt
    16501 gggtatgcac gcaggcggcg tgttgattgc gccgggcaag atttccgatt acagccccgt
    16561 gtatcaggcg gacgaatccg cctcgcccgt atccatgtac gacaagggcg acgtggaaga
    16621 cgtgggtttg gtgaagttcg actttttggg cctgcgcaac ctgaccatta tcgaaatggc
    16681 gcagaacaac atcaaaaaca ccgccggcga tatcgtcgat gtcggcaaga ttccgcttga
    16741 cgaccagact gcctaccaaa tcttccgcga tgcgaacacc accgccgtct tccagttcga
    16801 gtcgaccggc atgaaaaaaa tgctgaaaac ggcgcatacg accaagtttg aagaactcat
    16861 cgccttcgta tcgctctacc gacccggccc gatggacaac attcccgact tcgtcgcacg
    16921 catgaaggga caggaattcc aatacatcca cccgctgctg gaaggcatcc tcgcgccgac
    16981 ctacggcatt atggtgtatc aggaacaagt gatgcaggcg gcgcagatta tcggcggcta
    17041 ctcgctcggc ggcgcggacc tgctgcgccg cgccatgggt aagaaaaagc ccgaagagat
    17101 ggtgaaacac cgcgaaatct tcgccgaagg tgcggcaaaa caaggcattt cgcgcgaaaa
    17161 atccgacgaa atcttcaact acatggaaaa attcgccggc tacggtttca acaaatccca
    17221 cgccgccgcc tacgccctga tttcctacca gaccgcatgg ctcaaagccc actatcccgc
    17281 cgaatttatg gcggcgacga tgtcgtccga attggacaac accgaccagc tcaaacattt
    17341 ctacgacgac tgccgcgcca acggcatcga gttcctgccg cccgacatta acgaatccga
    17401 ctaccgcttc acgccgtatc cgaacatgaa aatccgctac gcactcggcg cgattaaagg
    17461 cacgggcgaa gccgccgtcg aatccatcat cgccgcgcgg caaagcggcg gcaaatttac
    17521 cggcctgttg gacttctgcg agcgcgtcgg caaagaacac atgaaccgcc gcaccctcga
    17581 agccctgata cgcggcggcg cgttcgacag catcgaaccc aaccgcgcca tgctcttggc
    17641 gaacatcgac cttgccatgg acaacgccga ccaaaaagcc gccaacgcca atcagggcgg
    17701 gctgtttgac atgatggaag acgccatcga accggtgcgg ctcatcgacg cacccatgtg
    17761 gagcgaatcg gaaaaactcg ccgaagaaaa aaccgtcatc ggcttttacc tgtccggcca
    17821 cccgttcggc ccgtatgccc aagaagtccg ccaaatcgcc ccgaccaaat taggccgtct
    17881 gaaaccgcaa gacagcgtgc gcctcgccgg attcgttacc gccgtgcgca ccatgatggg
    17941 caaacgcggc aaaatcgcct tcgtcagcct cgaagattcg agcgggcagg ctgaaatcat
    18001 ggtcggcgga caaacgctgg aaaactgcgc cgactgcctc aaagccgacc aagtgctgat
    18061 tatcgaatcc aaagtcagcc gcgacgatta cggcggcggc gacgggctgc gcatcatggc
    18121 aaaccaagtc atgaccctgc aaacggcgcg cgaacgctac gcccgcagcc tcagcctcgc
    18181 ccttgccccg catcacgaca tcggcggact ggtacggctg ctcgccgccc accaactgcc
    18241 cgacacgccg cgcatcccgc ttcaattgtc gtatgccaac gaaaaagcgt cgggcaggct
    18301 tcaagtgcct ccgaaatgga cggttacacc gagttccgca ttgttcggcg aactggaaac
    18361 attgctcggc agccggtcgg tgcgcgtgaa ttggtaacca aaaatacaaa tgccgtctga
    18421 agcccaaaac cggtttcatt cgtactttat tcgaatgatt gaataaaagt aactgccaag
    18481 aaaaacgtat tttttggtta tttcgccagc ctaaataaat caaccggggc gattgatatc
    18541 cgtgtacatg acacagacag cgccaaaggg aaaaacggca ttttcaaaag tatcggtgtc
    18601 aaaaccgccc tttcattcca aaaataccaa atcgacgaac cgggcaaaga aatcagaccg
    18661 tgccgcctga aaaaacgccc gcccgtccgt taaattaatc tatccctgtt tcagacggcc
    18721 tgaagcaggg atttttatat caagataaaa tgagaacggg agcgacaacc acgggcaaag
    18781 tcggcgcgaa ctatcaaaaa ttgtagcact gcgaaatgag aacgggagca ataaccctta
    18841 ggtagctctt gttatagcgg attaacgaaa atcaggacaa ggcgacgaag ccgcagacag
    18901 tacaaatagt acggaaccga ttcacttggt gcttcagcac cttagagaat cgttctcttt
    18961 gagctaaggc ggggcaacgc cgtaccggtt tttgttaatc cgctatattt tccgatgcaa
    19021 aacaaagcag tcatatattt gattccccct accgttgcca cgcttccctc aaatattcga
    19081 cgcagtcggt cagcgagtaa aacgggacat tgccgtggtc ggcattcgga tattcccgga
    19141 aaaatacggc ggtcccgcgc ctgtccaact ctgccgccat ttgttcggcc tgccctgcca
    19201 tgtcgcgttc ttccctgcgt ttgcaaccgc tgctccgctc gagtgcgccg atgttgaggc
    19261 aggcatcgat gccgtccagc cggttttcag acggcataaa gtcgagtatc cgcctgttgt
    19321 gccaccaaat cgaggggata cgagccaatg ccgtctgaaa cagcggtggg aaagcaggga
    19381 atacagtccg aacagtgcgc cgaacgagtg tccgaatacg gcggtttcat tacggttaag
    19441 ggtgtagcgg ctttctaaaa aggcggtcag ttcgctgtcg ataaagtcgg cgaagcggtc
    19501 tgcctgtccg aactgccgcc gttcgtctgc tgtggcgttg tctccaagcg gcggcgtgta
    19561 gtcggcggca cgctgcgcca ggtcgcgcac actgcctgtc gtgtagccga taccgacaat
    19621 caggcagggg gcgttgcttc gggtaacggg gttgttcatc agcgactgca tgatgttgta
    19681 cagcgcggga aaaaggcttc gccgtcgagg acaaagagga cgggatagcc ttcagactgc
    19741 atttcgccga gtgttgccgt ctgaatccga tagattcgcc ccgtgcaggt ggatttgatt
    19801 tcggtttcaa aggcttgggg cagtatggca ggttggaatg tgtcggtcgg tatgggtttc
    19861 atgatgttcg gcttgtgggt cagactggcg gcaagcggta aaaccgaacc ggcaaagcgg
    19921 tctgcctgcc ggttcggtct gttttccttc gcaatgccat actccggttg tgagcgcata
    19981 gggtatgccg cgcagcttgt tgtggtttga ttatgctgcg gctgccgttt cagacggcat
    20041 attggtcttt aaaaactgta acgcaggttt gccgtcaggc tgcgctccga accgggaatg
    20101 ttaaaggtgt tcgtgccgcc gacgcgggcg tagtaatggc ggttgaagat gttgtcggca
    20161 ttgatttgca gcttcagctt gggcgtgaag cggtatgccg ccatcgcatc gaacgtggca
    20221 taaccgcctg catgcatccc tgcagatgaa gtaatgccgc tcatcgcgtt cacgccgccg
    20281 ccgacggtca gcccgggcgt aacttggtaa gtcgtccaca ggtttgcgct gtgtttgggc
    20341 accagcagga agatgccgtc gtcgcgtgga ttggcggcgg ttttgatttg gctgtgcaga
    20401 tagctgtaac ctgcatggat ttgccatttc ggtgtaatcg caccgctgat ttcggtctca
    20461 acgccttcca tcacgcgttt gcccaatgcg gcgtaacggg tgttgcggtt gttcgggttc
    20521 ggcggcgttt ttgtctttca ggcggcaggg ggagacgcgg gtattgaggc ggtcatccat
    20581 atagctgcct ttaacgagct gtaatcgccg tttttctcgg tggcaatcgc gttgtacgaa
    20641 cgctgccctt tgatatggac ggtttccaaa tccgccgttt gtgcggcaaa aaccggagac
    20701 gagagtgctg ccaaaaccgt ggcggcggtc atattgatgc ggaaaactga cataaactgt
    20761 cccatctgta taaatgataa tggttctatt ttaataaagc acaacgcggc ttgttcggaa
    20821 aaacatatcg ctcagccgac aaattttgtc gaaaatgcga cacgtctgcg ttttccgcat
    20881 aaaatctgct tttttactgc aaccaacctg ccatgacccc gcccaaactc atcatcttcg
    20941 actgggacgg cacgcttgcc gatacgaccc aacccatcat cgacaccatg cgccgcagct
    21001 tcgccgaatg cggttttccg ccgcccgaag cggagcgcgt ccgcagcctg atcggataca
    21061 gcctgcccga aatcatccgc gccctgctcg aaatgccttc tgaagctgcc gttgccgaca
    21121 tcgcgcgcac ttattccgcg cattacctca atcccaacaa ccgcaatatg acactctttc
    21181 ccgatgcccc gccctgtctg gacaagctca aagcgcaagg cttccggctt gccgtcgcca
    21241 cgggcaaagg gcgggcgggt ttggacaacg ccatcagcca aaccgccacc ggcggctatt
    21301 ggctcgccac cgcctgcgcg ggggaatacc cctccaaacc ctcgcccgaa atggtattcg
    21361 gactctgcgg cgaactggga ctcgacccga aagaggcatt ggttgtcggc gatacggcgc
    21421 acgacctgca tatggcggca aacgcaggcg cggcggcagt cggcgttgcc accggcgcac
    21481 attcgcgcga acagctcctt ggcgcaccgc atctcgccgt attggacggt ttgtccgaac
    21541 tgcccggttt tcttgcacga cattacgcct gattggtttc cgcatccggc acgcggcaaa
    21601 aatgccgtct gaagcctgtt cagacggcat gaggcctttg caaaaaagcc cttccttcga
    21661 catccgaaac ccaaacacag gttttcggct gttttcgccc caaatacctc ctaattttac
    21721 ccgaatatcc ccttaa
//
LOCUS       DAWXHA010000020        21726 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.020, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000020 DAWXHA010000000
VERSION     DAWXHA010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21726
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.020"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(19..1329)
                     /locus_tag="AABD07_000606"
     CDS             complement(19..1329)
                     /locus_tag="AABD07_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HFB2355190.1"
                     /translation="MDISKQTLLDRVFNLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFIGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFVMVVVLGYFRVQGAIIITILTITVIASLMGLN
                     EFHGVVGEVPGIAPTFMQMDFKGLFTVSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPVFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTGDVPPMVWVVAVLWALKFWYLG"
     gene            complement(1465..2643)
                     /gene="ftsZ"
                     /locus_tag="AABD07_000607"
     CDS             complement(1465..2643)
                     /gene="ftsZ"
                     /locus_tag="AABD07_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HFB2355191.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRSVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFSYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDPTPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            complement(2762..4006)
                     /gene="ftsA"
                     /locus_tag="AABD07_000608"
     CDS             complement(2762..4006)
                     /gene="ftsA"
                     /locus_tag="AABD07_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HFB2355192.1"
                     /translation="MEQQKRYISVLDIGTSKVLALIGEVQDDDKINIIGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIELCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGT
                     VQEREGGGGLLARLKRWIENNL"
     gene            complement(4092..4820)
                     /locus_tag="AABD07_000609"
     CDS             complement(4092..4820)
                     /locus_tag="AABD07_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HFB2355193.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWNVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRHAPDGLPEKESEE"
     gene            complement(4810..5724)
                     /locus_tag="AABD07_000610"
     CDS             complement(4810..5724)
                     /locus_tag="AABD07_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HFB2355194.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKERGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLYDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKEKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTGH
                     SLVPKSAAVTGVGFADLCIEILKAAHVG"
     gene            complement(5836..7245)
                     /locus_tag="AABD07_000611"
     CDS             complement(5836..7245)
                     /locus_tag="AABD07_000611"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HFB2355195.1"
                     /translation="MMKNRVSNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLSSLGIQVYPGHTAEHVNGADVVVASTAVKKENPEVVAALERQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCV
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPVAAADSRALARAIRVLGKLEPIYCENVADLPQMLMNVLQDGDVVLNM
                     GAGSINRVPSALLELSKQI"
     gene            complement(7400..8467)
                     /gene="murG"
                     /locus_tag="AABD07_000612"
     CDS             complement(7400..8467)
                     /gene="murG"
                     /locus_tag="AABD07_000612"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HFB2355196.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRVRGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGIRGNGIKRKLMLPFTLYKTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPEEVRPQMYHQ
                     SGRNKLGNLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            complement(8471..9742)
                     /locus_tag="AABD07_000613"
     CDS             complement(8471..9742)
                     /locus_tag="AABD07_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HFB2355197.1"
                     /translation="MGDGVHTLLLDRPIVRDGRKFDAPLLWMVVLMTAFGLLMIYSAS
                     VYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRRLVPWIFALSGLLLVA
                     VLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRREEVLRSMESLGWQSI
                     WRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLIMVQPDFGSFVVITV
                     ITVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAFLDPWKDPQGAGYQL
                     THSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFGFFGMCVLIFCYGWL
                     VVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGALPTKGLTLPLMSYG
                     GSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            complement(9921..11258)
                     /locus_tag="AABD07_000614"
     CDS             complement(9921..11258)
                     /locus_tag="AABD07_000614"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HFB2355198.1"
                     /translation="MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKAERVA
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQSDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAELQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVMNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDVFCRAMKRAGREVKRFSLEHEADFWLERGTGCLKQGNEDLISTQDIPLQGLHN
                     AANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALKDKAKGVFLIGVDAPQIRRDLDGCGLN
                     LTDCVTLEEAVQTAYAQAEAGDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            complement(11343..11723)
                     /locus_tag="AABD07_000615"
     CDS             complement(11343..11723)
                     /locus_tag="AABD07_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HFB2355199.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWAGDVSDFRENLQAAEQGNAAAQ
                     FNLGVMYENGQGVRQDYVQAVQWYRKASEQGDAQAQYNLGLMYYDGRGVRQDLALAQQ
                     WLGKACQNGDQNSCDNDQRLKAGY"
     gene            complement(11848..12930)
                     /locus_tag="AABD07_000616"
     CDS             complement(11848..12930)
                     /locus_tag="AABD07_000616"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HFB2355200.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAVIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVAIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            complement(13354..14712)
                     /locus_tag="AABD07_000617"
     CDS             complement(13354..14712)
                     /locus_tag="AABD07_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HFB2355201.1"
                     /translation="MKPLDLNFICQALKLPMPSENKPVSRIVTDSRDIREGDVFFALA
                     GGRFDAHDFVGGVLSAGAAAVVVSREDCAALGGALKVDDTLAALQTLAKAWRDNVNPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDDAVSATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNALRAHVGCGFDGVGDIAKAKSEIYAGLCSDG
                     MALIPQEDANMAVFKTATFNLNTCTFGVDSGDVRAENIVLKPLSCEFDLVCGDERTAV
                     VLPVPGRHNVHNAAAAAALALAAGLSLNDVAEGLQGFSNIKGRLNVKAGIKGATLIDD
                     TYNANPDSMKAAVDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLSHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(14837..16483)
                     /locus_tag="AABD07_000618"
     CDS             complement(14837..16483)
                     /locus_tag="AABD07_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HFB2355202.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWKYCVSVGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMEKIAGDKDWREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSRTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLTGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGEWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVPGEGNNLAFIDRQSDDPAPWYAGKGKSAKNTSKK"
     gene            complement(16506..17984)
                     /locus_tag="AABD07_000619"
     CDS             complement(16506..17984)
                     /locus_tag="AABD07_000619"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HFB2355203.1"
                     /translation="MFSKLSPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACQG
                     EYTDGRSYIPAAVANGAAFVFWDDDGRFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIIGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATAAAMEVSSHGLDQSRVNGVPFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAIINVDDEYGAELIGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIEAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLDKVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALSTLQEIKPQGAALWCVFGCGGNRDCG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(18009..19757)
                     /locus_tag="AABD07_000620"
     CDS             complement(18009..19757)
                     /locus_tag="AABD07_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HFB2355204.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAMAVLFACLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQALPATRGTVSDRNGAVLALSAPTESLFAVPKDM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLYGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPQNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVR
                     MHSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPLSF
                     EKQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKLVNG
                     RYVDNKHVGTFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGSPFKKIMGGSLNILG
                     ISPTKPLTAAAVKTPS"
     gene            complement(19818..20081)
                     /gene="ftsL"
                     /locus_tag="AABD07_000621"
     CDS             complement(19818..20081)
                     /gene="ftsL"
                     /locus_tag="AABD07_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HFB2355205.1"
                     /translation="MNKSNFFLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRVQQARLANHEAIRAAAEKQNLHPPVSGNTFMVEHQR"
     gene            complement(20108..21064)
                     /gene="rsmH"
                     /locus_tag="AABD07_000622"
     CDS             complement(20108..21064)
                     /gene="rsmH"
                     /locus_tag="AABD07_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HFB2355206.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIVRAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAIRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHEPLPSWAAVREADL
                     PEPPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGPIPE"
     gene            complement(21061..21516)
                     /gene="mraZ"
                     /locus_tag="AABD07_000623"
     CDS             complement(21061..21516)
                     /gene="mraZ"
                     /locus_tag="AABD07_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HFB2355207.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVATLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLVPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLSQTDLQL"
BASE COUNT         5080 a         6245 c         5435 g         4966 t
ORIGIN      
        1 tttttaatat cgaatcaatc agcccaaata ccagaatttc aatgcccaca atacggcaac
       61 aacccatacc ataggcggca cgtccccagt ccggcgacac aaaagtttga ccacggcata
      121 gctgatgaag ccgaaggcga tgccgtctgc aatcgaatag gtaaacggca tgaagacaat
      181 ggtcaggaac gcgggcgcgg cttcagtcat atcgtcccaa tcaatgtccc tcgcactgcg
      241 gagcatctgc gtgccgacat aaagcagtgc gggcgcggtg gcaaataccg gaacactttt
      301 cgccaatggg gagaacatca gacacgccag catcaatacg ccgacggtaa ccgccgtcag
      361 gccggtccgt ccgcctgccg atacgcccgc cgcgctttcc acataaggcg tggttgaaga
      421 agtacccaaa gccgcacctg ccacaatggc ggtagagtct gcaagcagtg cgcgtttcag
      481 gcggggcagc ttaccgtcca ccagcagtcc ggcacggtgg gatacgccga ccagcgttcc
      541 ggtactgtca aacaaatcga ccaagaagaa gacgaaaatc acgctgacca tgctgacggt
      601 aaacagacct ttaaaatcca tctgcataaa ggtcggcgca atgcccggta cttcgccgac
      661 cacgccgtga aactcgttca aacccatcag gctggcaatg acggtaatcg tcagaatggt
      721 gatgatgatt gcgccttgaa cgcggaaata ccccaatacg accaccatga caaaaccgaa
      781 caatgccaac agtgcgctgg gctgatgaat atcgcccaag ccgaccaagg ttgccggatt
      841 ggcaacgata atgcctgcgc ctttcaggga aatcagtgcc aaaaacaaac cgataccggc
      901 ggcaatcgac attttcaaac ccataggcag tgcgttgacc agcatttccc tgactttaaa
      961 aaagctgaac aggatgaaaa tcagaccgga aatgaacacc gcacccaacg ccacctgcca
     1021 aggcacgccc atacccttaa cgacggcaaa ggtgaaatag gcattcagcc ccatccccgg
     1081 ggcaagcgca atcggatagt tgccgataaa acccatgaca aaacagccga tggcggatgc
     1141 gatacaggtg gcgacgaata ccgcccccat atccattccg gtctcgccca aaatcagggg
     1201 attgacgata acgatgtagc acatcgtcaa aaaggtcgtc aaacccgcca tcaactcggt
     1261 acgtaccgtc gtaccgtttg ccttcaggtt aaaaacccta tccagcaatg tttgttttga
     1321 aatatccata tctagcagtc cgtttcaagt aaaaaatctg aacccgcaca ccgcaaaccg
     1381 cacaggattc ggcatattga aaaatatacc tcccaaatcg ggaaaaccgg ttcgggaggc
     1441 aataagttta cggcagacgg cacattattt gtctgaattg tgttgacgac gcaaaattgc
     1501 aggaatttca aaatcgtcaa ggacagactg gttatcgaaa tccgctgctg tcagattcat
     1561 ggtgcggata ccgcgattgg tgcggatcat accttcgaca ttgtggcttt gctcctgttt
     1621 ggacggggca accgcttcta cttcccttgc cggagtagga tcgaccgctc ctttttcttt
     1681 cagaccggta gcgataatgg taatccggat ggcatcttcg ctcatggtct cgtcttcagc
     1741 ggcaccgaat ttgcattcca aatcgggatg cgcgctttgg ttgacgattt tcatgacttc
     1801 agacaactcg gacattttca ggcaacccgg agcagtcgta atattgacca gcacaccgcg
     1861 tgcaccatcc aaagttacat cgtccagcag cggactggaa atggcctggt cggtcgccat
     1921 acgcgcacgg tcgatacctt gggcataacc cgaacccatc atagcgatac cgcggttgct
     1981 catcacggtt ttcacgtcgg caaagtcgag gttgatgatt tcgctcgggc aagttaccac
     2041 ttcggaaatg cctgcgaccg catcgcgcaa tacattgtcc gccgcgcgga aggcttcgcg
     2101 catagttacg tcttcaccca atgcggtcat cagtttgtcg ttcgggatga taatcagcga
     2161 atcgacgtgt tctttcaact gttccaaccc tgcctgtgcc acatggacgc gtttgccttc
     2221 ataagaaaac ggacgggtaa ctacggcaac ggtcagaatg cccaaagact tggcaatctc
     2281 agcaacaacc ggcgcggaac cggtaccggt accgccgccc ataccggtcg tgataaacag
     2341 catattggca ccgcgaatgg cttcttcaat ggcctcccga tcttcctgtg ctgccgcacg
     2401 gccgatatcg ggattcgcac ccgcgcccaa accgcgtgtc agattcgtac ccaactggat
     2461 tctcttcgcc gcatggtttt ttgccaaaga ctgcgcatct gtattggcac tgataaactc
     2521 cacactgcgc acattgttgg caaccatgtt attgattgca ttgcaaccgc cgccgcccaa
     2581 gccgattact ttaattaccg cagggctgac tgccgattct gccacgtcgt aaacaaattc
     2641 cattcaaaaa ctcctgatcg ccccgttcag aggacggttt aaataaatta ttatttatta
     2701 tataagaagt atcttactgc tggcaaaata cttctcacct gtcaaacggc aatccaactg
     2761 ttcagaggtt gttttcaatc caccgcttca atcttgccaa caaaccgccg cccccttctc
     2821 tctcttgcac tgtaccgttt tccggttgcg gcaagtttcc ttccagcttg catgctgcat
     2881 gaagcagccc gatagcggta gaaaagcgcg gtgtgcggac acggtcggac aaaccgccca
     2941 tttcttgggg cgcaccggtg cgtacaggca aatcgaagat tttttcggca aattccacaa
     3001 tcccggtcat catggacaca ccgccggtca gaacgatacc cgcattcagc acttctttgg
     3061 ggaaacccga tttttgcagt tcgcccagca ctacgccaaa aatctcctga atacgtgcgc
     3121 tgatgattgc tgccaaaacc ttactggaaa cctgacgcga tgtccggtca cccacgcccg
     3181 gaacttcaat catctcgccc aagccttccg tatcgcatga tgccacgcca taatggattt
     3241 taatgtactc ggcggcatcg agaggtgttc tcaacgattt ggacaaatct ttggtaatca
     3301 gattaccacc ggccggaatg acggacgtat ggcggatggc gccgttcata taaacggcaa
     3361 tatcggtcgt tccgccacca atgtcaatga cgcatacgcc gaggtctttt tcatcttcag
     3421 tcagcaccgc ctgcccgctt gccaacggtt gaagcatgat ctgatcgctt ttcaagccgc
     3481 acagctcgat acatttttgg acattctgca ctgccgtact tgcaccggta atgatgtgca
     3541 cccgcgtatc cagacgcaca ccgctcatac cgatgggctc ccttacacca agttgggtgt
     3601 cgataatgta gtcttgaacc acggcatcga gaattttttg atcgggcggg atattgattg
     3661 cctttgccgt ttcaatggcg cggtcgatgt ctgcctgtgt tacttctccg tctttgattt
     3721 taaccacacc ttgcgaatta aggctgcgga tgtggttgcc tgcgatacct gtggtaacgt
     3781 gggtaatttt ggtatccgcc atcagctcgg catcattgac cgcctgcctg atggcttgga
     3841 cggtggcatc gatattggtt accatgcccg cgcgcaagcc ccgtgaagga gcctgcccca
     3901 aaccgatgat gttgattttg tcgtcatctt gaacttcccc gatcagtgcg aggactttag
     3961 acgtaccgat atccagtacg ctgatgtatc ttttctgctg ttccattgtt cgtctgccct
     4021 taaaactgat tgaaatttgc gtcgcaccgt ttcagacggc acggccgtaa tatgtccgat
     4081 acctgttccc actattcttc ggattctttt tcgggtaaac cgtcgggagc atggcggact
     4141 gaaaatccgt ccttatacct catatccaca taggataacc gatttttatt cttacgcaac
     4201 agatgctgcc acgcttcggt aaaaagccgg aggcgtttca tctcgttttc ccgtccgagc
     4261 ctgacggtga tgccgttgtc caaaacgaca ttccacgccg aacgtgccgt ataggtcatc
     4321 tctttgatgc ccaaaccctg ttttgccaaa acagtcgaaa attcgtcata acggcggagc
     4381 atttcggcag acgttccttc cgcgcctctg aataccggca ttccgggtct gtccaagcgg
     4441 gcttcaaaaa cattgccttc gccgtccacc aaggcatggt cgccccaacg tgcaaccggc
     4501 ttgcgctcgg tcaggacgac ctcaaccgta tcgggaaaac ggcggcgcac catgaccgac
     4561 gcaatccacg gataccggcg gtaggcttcc tgtgcgccat tgatgtccgt cctcaaaata
     4621 ttcccatgga tgtattcttt cgccaaactg cccaatgcct tcttatcgga ataaaccagg
     4681 ttgcccttca gcgacacctg cttgacgggc agatgattcg aattgtaaaa ccaaaccagc
     4741 ccggacgcag caagcagcat cgccatcatg acaagcagcc agcgcgtcag ccgttccatc
     4801 gcttcggcat tatcccacat gtgcggcctt caaaatttca atacataaat cggcaaaacc
     4861 cacgcccgta acggcagcgg atttcggtac taaactatgg ccggtcatac cgggcagggt
     4921 gttgatttcc aacagataga gtttgccgtc ggtatctttg aggaaatcga cgcgcacgca
     4981 gccttccgca ccgattgcct gtgcgccgcg aaccgccagt tcgcgcatca ggctttcttc
     5041 ggcttcggtc aaatcttccg aaggacattg ataaatggtg tcgtctcggt tgtacttggc
     5101 ttcgtagtcg taaaactcgg ttgcggggat gatgtgtatg ccgggcagcc ctttgccgtt
     5161 caggacgggg caggaatatt cgccgccgcc gataaaacgt tcggcaatga tttcgccctg
     5221 aaggtgtttc aattcttcgt aaacgctttt cagacggcct ttttctttga cttttaccac
     5281 gccgacgctg ctgccttcgg ccgccggctt cacaaacatc ggcagaccca atttttcttc
     5341 gacggcatcg aaatcggtat catcgtacag tacggcgaac tcgggaacgg gtaatcccaa
     5401 tgcctgccaa atcagtttgc agcggtattt gtccatgccg atggcggagg cggcgacacc
     5461 gctgccggta tagggaatgc ccaacagttc caatgcaccc tgaacagccc cgtcttcgcc
     5521 gtaagtaccg tgaaggatgt tgaatgccgt ctgaaagccc cgctccttca gttcggataa
     5581 cggcgtttcc ttagggtcga aggcgtatgc gtctatgcct ttgcttttta aggcgttcaa
     5641 aatggcggta ccgctgtcca gcgagatttc tcgttcgctg gaaaaaccac ccatcaatac
     5701 ggccactttg ccaaaattct gcattgtttt tgttctttcc taattgcttt atgcttgttg
     5761 tcagaggtcg tctgaaacct gattgcggtt tcagacgacc tttatatgat gttccgtctg
     5821 tcaggcgggt gtatctcaaa tctgtttcga caattccaac agcgcggagg gaacgcggtt
     5881 gatgcttccc gcacccatat tcaacacaac atcgccatcc tgtaaaacat tcatcagcat
     5941 ttgcggcagg tcggcgacgt tttcgcagta aatcggctca agtttgccca atacgcggat
     6001 agcacgcgcc aaggcgcggg agtcggcggc ggcaaccggc tcttcgccgg cggcataaac
     6061 ttcggtcagt accagcgcat caacggtatt gagtactttg gtaaagtctt caaacaaatc
     6121 gcgcgtgcgg gtatagcggt gcggctggaa ggcgagtacc aaacgttttt ccggatacgc
     6181 gccgcgtgca gcggcaaggg ttgccgccat ttcgacgggg tggtgtccgt aatcgtccac
     6241 cagcaaagcg gtcccgccgt ttggcaactt gatgtcgccg tatttttgga agcggcggcc
     6301 gacgccttca aagccgagca agcctttttg gatcgcttca accgatgcgc cgacttccag
     6361 cgccacgccg atggctgcca atgcgttcag cacgttgtgt ctgccgggca tattcagcac
     6421 gacttcaaac gacccctgct catgtccttt catttgaaca tggacggtga atttcatttg
     6481 cgcgccgacg ttttcgatgt cggtggcgta gatgtcggcg gtatcgtcca aaccgtaagt
     6541 agcataaggt ttgctcactt tgggcaaaat cgcgcggacg tgttcgctgt caacacacaa
     6601 aaaggctttg ccgtagaagg gcatacggtg gatgaaatcg ataaacgcct gatgcagttt
     6661 ttcgacgctg tgcccgtagg tatccatatg gtcttcgtcg atattggtaa cgacggacat
     6721 aatcggggtc agatgtagga aagaggcatc ggattcgtcg gcttcggcaa cgatgtattc
     6781 gcctttgccc aagcgggcgt tggtgcctgc ggcgttgagt ttgccgccga taacgaaagt
     6841 ggggtcgagt cctgccgcgc cgaggatgga ggcggtcagg ctggtggtcg tggttttgcc
     6901 gtgcgtaccg gcaatggcga tgccgtcacg gaagcgcatc agctctgcca gcatcaaggc
     6961 gcgcggaata acgggaattt gccgctccaa cgcagcgaca acttcgggat tttctttctt
     7021 gacggcggta gaggcaacga cgacatccgc accgttaacg tgttctgcgg tatggccggg
     7081 ataaacttga atgcccaggc tgctcaaatg ctcggtagcg gcatttcgcg cctgatccga
     7141 accggaaact ttaaagccca aattgtgcaa gacttcggcg ataccgctca tgccgacgcc
     7201 gccgataccg acaaaatgga tgttgcttac tcgatttttc atcataatgt tgcgttccgg
     7261 ttggttttta gtgcgtaaag gcgttatttt aaaggtctga ccgtttgcgc accatagttt
     7321 tctgacaaat atatagcgga ttgaaataaa aaacatccat gccgtctgaa cggcttttca
     7381 gacggcatgg ttcggcagtt tacgccgcac acgcaatcgc ggcttcggca acgtcatccg
     7441 cgctgtgcgg caatgccaac gtacgggcgt tttccgccca tttgaggcat ttttcgcggt
     7501 tgaggctgcc gaggatttcg gcgagttttt ccgccgtcaa ctgggtttgc ggcaacagca
     7561 gccccgcttc tgcctgcacc atgaaacgcg cgttggcggt ttgatggtca tcaacggcgt
     7621 gaggatacgg cactaacaac gcgcccagcc ccgccgccgt caactcggca atcgtcagcg
     7681 cgccggcacg gcaaatcacc aaatcggcat cacggtaggc ggacaccatg tcggtaataa
     7741 attccacgca ttccgctttc acgcccaacg cgtcataatc cgcctgaaga ttgcccagct
     7801 tgttacgccc cgactggtgg tacatctgcg ggcgcacctc ttcaggcagc agtgccaacg
     7861 cctgcggtac ggttttgttc aaaacgtccg cacccaaact gccgccgacc accaaaattt
     7921 tcagacggcc ttcgcgccct tggaagcgtt cggcaggcac gggcaggttg ctaatatcgg
     7981 cgcggacggg gttgccgacc aaaccgcctt cgtggctgaa cgctttcgga aaagcgtaca
     8041 acacccgttt cgcccagcgc gacaggtggc ggttggacaa gcctgccacg gcgttttgct
     8101 cgtgaatcac aatcggcacg cccaagagtt tcgccgccag accgccggga aaggtaacaa
     8161 aaccgccgaa gccgatgacg cactcgacac ggtgtttgcg gataatccgc tgcgcttcgc
     8221 ggacggtttt gtacagagta aacggaagca tcagcttgcg tttgatgccg ttgccgcgta
     8281 ttcctttaat cgccagcgtt tccaagcgta tgccgtattg cggcacgatg cgctcttcca
     8341 tcgaatcctt gctgcccagc caaattacat gatgaccgcg cacgcgcaat gaatccgcca
     8401 cagccagagc tgggaaaatg tgtccgcccg ttccgcccgc catcagcata aaggttttac
     8461 cgcccatgat ttactccacc cggtaaccgc gcattttccg gcggttttca taatcgatac
     8521 gcaacagcag catcatgctg atcagcatga aaaagactga cgaaccgcca taggacatca
     8581 acggcagcgt cagacctttg gtcggcaaag caccgatgtt cacaccgata ttgaagaaac
     8641 tttggatacc gatccaaatg ccgatacccg aagcgatata ggcgttgaaa gtcaaaccca
     8701 aatcgcgcga ctgcttgccg atggaaaacg cccgcaccac cagccagccg taacagaata
     8761 tcagcacgca catcccgaag aagccgaatt cttcagcgat gatggcaaaa ataaaatcgg
     8821 tatgcgcttc cggcagaaag ccgcgtttgc tcaaactcgc acccaaaccc ataccgaacc
     8881 actctccgcg cccgattgcc atcagagagt gggtaagctg gtagccggca ccctgcgggt
     8941 ctttccacgg gtccaaaaat gccactaccc gctgcacacg gtagggagcg gcggtaatca
     9001 tcagcaccat cccacccaag acgctgccta ccaggacaaa aaaatatttc cacggcaatc
     9061 ctgccagaaa cagcattcca acggtaatga cggtaatgac gacaaacgaa ccgaaatccg
     9121 gctgtaccat tatcagcacc aaaccgaacg ccaccagcat aatcggcagg atgatcgccc
     9181 ggaaacggcc gtacatttct aatgtttcac gacgtgcctg cggattggtg gcggacataa
     9241 tcaggttggc cgtcccccgc caaatcgact gccaacccaa actttccatg ctgcgcaaca
     9301 cttcttcacg gcgcgtgaac aggcttgcca aataaaggat gactgccagc ttgaacagct
     9361 cggtcggctg gaaattcaac ggacccaaag gtatccaacg ggtcgcgcca ttgatttcgc
     9421 gcccggcaat caatacggct accagcaaca ggccggataa ggcaaaaatc cacggcacaa
     9481 gccgccgcca tgtcctcatc ctgcaaagaa accataaaaa accgctcgct ataaggccgg
     9541 caacgacgaa ccccgcctgc ctggtcaaat agaaaaactg atcgccgcct tccttcgatg
     9601 ccaaatacac agaagccgaa taaatcatca gcaggccgaa cgccgtcatc agcaccacca
     9661 tccacaaaag cggcgcgtcg aatttcctgc cgtcgcgcac aatcggcctg tcgagcagca
     9721 gagtgtggac accgtcgccc acttttacca atacttccga aatcttcaaa aaaccacctg
     9781 ccagtctgtt tgcacctgcc gcaaagggca aaaatttcag acggcagaca atgccgtccg
     9841 aacatacgat acatcccaaa tcggtattct aaatctttac ttgccgccca acaatgacgg
     9901 cgtttgtgtt tcggacggca tcacaaagcc ttaaacgctt cgataaacac ttccgaacgg
     9961 tgcgcgtagc ctttaaacat atcgaaactc gcgcaggcgg ggctgagcaa gacaatatcg
    10021 cccgcttcgg cttgggcgta tgccgtctga accgcctctt ccaaagtgac gcagtcggtc
    10081 aggttcaagc cgcagccgtc caaatcgcgg cggatttgcg gcgcatcgac gccgatcagg
    10141 aacacgcctt ttgccttatc tttcaacgcg tcgcgcaggg gcgtgaagtc ctgccctttg
    10201 cccatgccgc ccaaaatcac gaagagcggg ttttgcaaac cggcaatcgc ggcggcggtc
    10261 gcgccgacat tcgtgccttt gctgtcgtcg atgaatacca cgccgttttt ctcgccgatt
    10321 ttttccacac ggtgcggcaa gccttggaag gttttgacgt gttccagcaa tgcttcgcgc
    10381 ggcaaaccga cggcctcgca caaagccacg gcagccataa cgttggcggc gttgtgcaaa
    10441 ccttgcagcg ggatgtcttg cgtagaaatc aaatcttcat tgccttgttt taaacagccc
    10501 gtcccgcgtt ccaaccaaaa atcggcttcg tgttccaagg aaaaccgttt cacttcacgc
    10561 cctgcccgtt tcatggcgcg gcagaacacg tcgtccgcat tcaaaacctg cactccatcg
    10621 ccacggaaaa tcttggcttt ggtatgcgcg tagtcgagca aatcgtcgta gcggtcgaga
    10681 tggtcttcgg aaatgttcat caccgtcgcc gcagtcgggc gcaggctttc ggtgttttcc
    10741 agttggaagc tggaaagctc caacacccac acgtccgcct ttttgccttc gcgctgcaat
    10801 tctgcctcca aaaccggcgt accgatattg cccgcaatga cggtatccag cccgcacttg
    10861 atgcagagat agccgaccag gctcgttacc gtggttttgc cgttgctgcc ggtaatcgca
    10921 atcaccttgt cgccgcggcg gttcacaatg tccgccagca attcgatgtc gcctagcacg
    10981 cgcccgccgt tttgcttgaa cgcctcgata tccgactgcc gctcgctgat gccgggactg
    11041 agcgccagaa tatcgaaacc gttgtccaac gcatctttca gacgacccgt gtaaaacacc
    11101 agcccgtcaa acatcttacc gatttgcgcc acgcgctcgg ctttcagctc cgcatcataa
    11161 gcggcaacct ccgcgccgtt tttgcgcaga taggcaatca tggaaatacc cgtgccgcca
    11221 agtccggcga cgaggatttt tttgttttgg aaagtcattt tggttttgtc ctaaaacaaa
    11281 tcatattggg caggagacgt ccgcccttgc ccaagccgct ttcagacggc atcgcgagcc
    11341 gattaataac ccgccttcag gcgttggtca ttgtcgcagc tgttttggtc tccgttttga
    11401 caagccttgc caagccattg ttgagcgagc gcaaggtctt ggcgcacgcc gcgtccatcg
    11461 taatacatca agcccaaatt gtattgggct tgggcatccc cttgttctga agccttgcga
    11521 taccactgca ctgcctgtac ataatcttga cgaactcctt gtccattttc atacatcacg
    11581 cccaaattga attgggctgc tgcatttccc tgttctgccg cctgcaagtt ttcccgaaaa
    11641 tccgatacgt cacccgccca caccgcttgg ttcaagccca aggcaatcag ggcggcggca
    11701 agccatttga ctgtctgttt catggttttt tcctgtttta gtataaggcg ggtttcagcc
    11761 gccgttaacg ataggacggg gcggattgcc gccgcaggtt tattgcgcgt tcaaatgccg
    11821 tctgaaaggt gttcggacgg cataggttca gcgaattttg agggtactca aaccgatcaa
    11881 taccaagacg atggtaataa tccagaaacg gacgacgact tgggtttctt tccagccttt
    11941 ttgttcgtaa tggtgatgaa tcggcgccat caggaagatg cgttttttgg ttttcttgta
    12001 ccagccgacc tgaagcataa cggacacggc ttctacgacg aacagaccgc ccataatgac
    12061 gaggacaaat tcttggcgga cgatgacggc aacggtaccg agcgcggcac ccaatgccag
    12121 cgcgccgaca tcgcccataa agacttgcgc gggataggcg ttgaaccaca aaaatccgag
    12181 gcacgcgccg cacatggcgg tgcagaatat agcgacttcg ttcgcgccgg cgacataggg
    12241 aagctggagg tattgggaaa attggtagtg tccgctgacg taggcgaaaa tggcgagccc
    12301 ggcggcaacg aggacgacgg ggaaggcggc aaggccgtcc aagccgtcgg tgaggttgac
    12361 ggcgttggat gtgccgacga tggtcaggta agacaacacc aaaaagccga ccacgcccag
    12421 cggcagggcg atttgtttga aaaacgggac aatcaaaata ttgttggcgg aattggcggc
    12481 aaggtaaaac aatgccaaac cggcgataac ggcaacgctt gactgccaca ccattttgaa
    12541 tttggcggac acgccgttgg ggtctttata aacgactttg cgccagtcgt cgtaaaaacc
    12601 gagcgcaccg gtggcaagca gtacgcccaa gagaatccag atatacgggt tcgcccagtt
    12661 gccccacaac agggtggaca cggtaatggc ggtcagaatc agcgaaccgc ccatcgtcgg
    12721 cgtgccgttt ttgacgaggt gggtttgcgg gccgtcggta cgcactgcct gcccgcattt
    12781 gagcgcggtc agcctgcgta tcgtccacgg gccgaacatc agggaaaacg ccaaggcggt
    12841 caacgccgcc ataacggcgc ggaatgtggt gtattgaaaa atattcagac cggttaacca
    12901 gttgctgaaa tgtgcgagcc ataaaaacat ggggcttcct tttttgtttt gtcgttatag
    12961 cggattaaca aaaaccggta cgtcgttgcc ccgccccggc tcaaagggaa cggttcccta
    13021 aggcgcccaa gcaccgggcg gatcggttcc gtactatccg tactgtctgc ggcccgccgc
    13081 cttgtcctga tttttgttaa tccgctatac atcgggcttg cgcccgcttg aggtttgctt
    13141 gctgtccggc aaggtttcgg acggcttttg cagattaacg tgcagggact ttcccaatca
    13201 cgcaaatcgg gtagctcccc ggatttttgc cgccgcccaa gtctaaacat aaatcttcat
    13261 aaagatacgc ctgcgtccgc attccggcat aaaacgcgcc gaccagcgcg gcaatcagca
    13321 ataaggcttt aaaaaaacgt cggcttttca ttttcactta tcctccaatg cctcgaccac
    13381 ttcttccatc tgcataaagc gcgaaccttt caccaacacg gtggcgcgtt cgggcaaatc
    13441 gtggctcaac acttgaatca acgggtcttt ggcggcgaac cacaaaccgt ccgcgccaaa
    13501 tttttccgcc gcttcgacgc tgttgtcgcc gacaaaataa gccgcttcga tgccttggtc
    13561 gcgggcgtac gcgccgactt cggcgtgcat ggcggcggct tcgtcctcgc ccagttcgcc
    13621 catatcgccc atcacgaaaa tgcgcggcgc aggcatacgc gccaacacgt caaccgcggc
    13681 tttcatactg tcgggattcg cattataagt atcgtcaatc agggttgcgc ccttgatgcc
    13741 ggctttgacg ttcagacggc ctttgatgtt gctgaagcct tgcaaacctt ccgccacatc
    13801 gttcaaactc aaaccggcag ccaaagccag cgcggcggca gcggcggcgt tgtggacatt
    13861 gtggcggccg ggaacaggca gcaccacggc agtgcgctcg tcgccgcaca ccaaatcaaa
    13921 ttcgcacgac aaaggtttca gcacgatatt ttccgcgcgg acatcgccgc tatcgacgcc
    13981 gaaagtgcac gtattcaaat taaacgttgc cgttttgaag acagccatat tggcatcttc
    14041 ttgaggaatc agtgccatgc cgtctgaaca taagcctgca taaatctcgc ttttcgcttt
    14101 ggcaatatcg cccactccgt cgaaaccgca tccgacatgg gcgcgcaggg cgttgttgac
    14161 caaagcggca tcgggtttgg cgatttgcgt taaaaccgcc agttcgccaa aatggttcat
    14221 gcccatttca atcacggcat agcggtgttt ttcgtttaat ttcaataaag tcagcggcaa
    14281 tccgatgtgg ttgttgaagt tgcctgccgt cgccgaaacg gcatcatcgc cgaaacggcg
    14341 gcgcaatacc gcagccagca tctccttcac cgtcgtcttg ccgcccgaac cggtaatgcc
    14401 gaacacaaac gggttcacat tatcgcgcca cgccttcgcc aacgtttgca acgcggcaag
    14461 cgtgtcatcg actttcaacg cgccgcccaa agccgcgcaa tcttcgcgcg aaaccacaac
    14521 cgccgccgcg cccgcagaca atacgcctcc aacaaaatca tgcgcgtcaa accgcccgcc
    14581 cgccaatgcg aaaaacacat cgccttcccg aatatcgcgg ctgtcggtta cgatgcgcga
    14641 cacgggtttg ttttcagacg gcatcggaag cttgagggct tggcagatga aatttaggtc
    14701 cagtggtttc atatttgctt tcgttaatat tcgggcggcg gacacatcgg tagcggctga
    14761 tttttttatc gcctgttttg ctgtggtaaa acacagatta ttttcccatt ctcattcggc
    14821 attttttctg tacgtatcat tttttagacg tatttttagc cgatttgcct tttcccgcat
    14881 accacggcgc ggggtcgtcg gactgtctgt cgataaaggc aaggttattg ccttcgcccg
    14941 gcacatcggg gacattcccc caaaaatcat agccgtcatc gggcaactcg tcggtttcga
    15001 tacccgtcca actgccgaat ccgcgtaaaa aattaaacgc gctgcgcctc actttaatca
    15061 tttcgcgccg cgtgtcatcg gacgaaattt taaccagcgg cacgccgtag ctttgacgct
    15121 tccactcgcc gtgtgtcaac gttcgctcgc cgcctttgcc gacatgcatc aaaccgtggt
    15181 cggaaaagta aaccaaagac cagctttctt tattttcatt caatatctta accgtatctt
    15241 ctaaaaattt atcggtttgc gcgatggtgg aaacatagca ggatattttt tcagtttgat
    15301 actgaaaccg ccgcgcatcc ttatccaaac gtgtgcaaaa atcactgtgc gaacccatca
    15361 ggtgcatcac aatcagccga ggcttcgtgc ctgcatttcc tgtcaaaacc cgtttgaacg
    15421 ccggcaacaa aaggcggtcg ctcaaccccg cgcttttgcc ataatcaccc ctttgggtaa
    15481 accacggata atcgctgcgt agggcatagg tggaaatttc gttggcaaaa tgccccaaca
    15541 ttccttgatt agacagccac gccgtccgaa aacccgcctg cttcgccaag ctgacaatgt
    15601 tattgttcgg ctctcccggc agccccaaag tctgcggcag cgaaagattc gtcgcgtggg
    15661 cggtcgattg gtaaccgttt atcaacagcc ctttggtccg actcaaaaaa ggcgtatcgg
    15721 gcaatgggaa accgtaaaca ttcatataat ccgaacgcgc gctctcaccg ataaccacaa
    15781 cataattttt atacttgggc gcaacatgac ggatatgcca tgttgacgct ttttttgctg
    15841 cttccaaaat gtgggcgcgc ttggcggcat attgtgccgg cgcggaagcc aaatcgtaat
    15901 acaggtcgaa aatattcaac aacaggccgg catcaggttc tcgccaatct ttatcgccgg
    15961 cgattttctc catcaccgcg caggataaaa tcaaagtcaa taatatggtc agccatattt
    16021 tgctgcggcg tttatagttt tttacgtcag caaatacccc cacagataca caatatttcc
    16081 aaactgtcaa gccaaaaatg aaaaataatg cctgcacaaa ataaagcgac ccgggaagat
    16141 tgccgacaaa ttcacgcgcc tcggcaggat tgctttccaa tatcgaaccg actatctgat
    16201 aagaaggcgc accatacagc cagccgaccg gcaaatatag ggcggttgtg ccgacgtaaa
    16261 tcagtaaaac aactgaagaa acgcgcggga agccgcgtgc caataataat aaaaatacaa
    16321 ccgaagccaa agcgcccacg gcagaataac ggtagccgta ttcatattcc aagtgataac
    16381 ctgatgcgat ggccgcgcca aaacaaaagg ctaaaagcgc gcaaatgccc aatgtatttt
    16441 ttaatgtctg atccatattt tttattcggg cggattgttt catacgatgc cgtccgaata
    16501 tcccattatt tacgagttaa caaagcctgc ccgacgattt caagatcgga aaaacggtgc
    16561 ttcacgccct gtacatcctg atagttttcg tgtcctttgc cggcaatcag gatgatgtcg
    16621 tttgcggcgg cctgctcaac cgcataacgg atggcggcgg cgcggtcggc ttcgacgcat
    16681 tcgggcgcgg gcacggcggg caggatgtcg ttgatgatgt cgtgcggatt ttccaaacgc
    16741 gggttgtcgc tggttacgac gactttatcc gcgccctgta cggctgccgc gcccatcaat
    16801 gggcgtttgc cgcaatcgcg gttgccgccg caaccgaata cgcaccataa ggccgcaccc
    16861 tgcggtttga tttcctgcaa agtggagagt gctttttcca atgcgtcggg cgtgtgggcg
    16921 taatcgacga cgaccaaggg cttgccgctg ttcatgatgc agtccatgcg ccctgaagcg
    16981 ggacggattt ttgccagcac atccaatacc ttatcaagcg gataaccgtt ggcacaaagc
    17041 aaggcgatgc aggcggcgag gttttgcgcg ttgaaccgtc cgagcaggcg tgtgcggcat
    17101 ttcccttcgc cccacggggt ttggaatacg gcttctatgc cgtctgaaga ggcggtgaaa
    17161 tcggtaatgc ggatgtcggc gtgttcgctg aaaccatagc tgtaaacggc caaatcgggg
    17221 cagtcttttt tcagacgacc tatgagttct gcgccgtatt cgtcatctac attgatgata
    17281 gcgtgcttca agccatgcca gtaaaacagt cgcgacttga tggcaccgta ggcttccatc
    17341 gtgccgtggt agtcgaggtg gtctcgggtg aggttggtaa agattgcgct gcggaatggc
    17401 acgccgttga cgcgcgactg gtcaagaccg tggctggaga cttccatcgc ggcggctgtt
    17461 gcgccctgtt ggcggaaacg gtagagcagg gtttggacat cgacgggggc gggggtggtg
    17521 tgcgtggttt cttccaatgc accccaaaag ccgttgccga ccgtgccgat aatggcggtt
    17581 ttttcgccca acaaatcggc ggcttgcgcc agccattgcg tgatggaggt tttgccgttg
    17641 gttccggtta cgccccagac tttgagaccg tctgaaacgt tgccgtaaac ctgtgccgcc
    17701 aatatgccgg cacggtgttt caaatctttg atgccttgat tggggacttt ccattcggga
    17761 ttccacgcga atctgccgtc gtcgtcccaa aaaacaaaag ccgcgccgtt ggcaacggcg
    17821 gcggggatat aactgcggcc gtcggtatat tcgccctgac aggcaacgaa aatatcgcct
    17881 tgtttgattt ggcggctgtc tgaatgcaac aaacgccctg ccgcgtttgc acacgacagg
    17941 gtcgggatgc cggtttcagc caaagggctt aacttgctga acataaaaca atctcgttga
    18001 tactcggatt aagacggtgt tttgacggct gcggcggtca gtggcttggt cggggaaatg
    18061 cccaagatgt tcaggctgcc gcccataatt tttttgaagg gcgaccctgc cactacgccg
    18121 ccgtaatagc cgtgggcagt cggttcgtcg atggttaccg ccacaatcac acgggggttt
    18181 ttggcggggg caaaaccgat aaacgtaccg acgtgtttgt tgtccacata gcggccattg
    18241 accagtttgc gcgccgtacc ggttttagcg ccgacatcga aaccgtccac cgcacccgcc
    18301 gtaccggtgc cgcccggctc ggttacggaa accatcagat tgcgtacctc gcgcgcggtc
    18361 gattctttga atatgcgttt gccttgcggc gcaaccgcct gcttctcaaa gctgagcggc
    18421 agcaaaacgc cgtcgtgcgt cagtgcggta taggcgcgcg ccaattgcag caggctcaat
    18481 tgcaggccgt aaccgaaaga catcgtcgcc tgttcgatgg gccgccacct gcgccaattt
    18541 ctcaacaaac ctgcagtttc ccccggaaag cccgagtgca tacgcacacc gatgcccaat
    18601 tcatgataga agtcatacat ttcttcggcg ccgaaacgcg cagacagttt gcttgtgccg
    18661 acgttggacg atttctgcat aatgccgcgc acatccaaag aggggtaaac atgggtatcg
    18721 tcgcgcacgg gagacggtcc gattttataa ggctgcgtat tcagccgttc gttcaaatcg
    18781 gttttgcccg catccaatgc cttcgcaatc acgaacggtt tgattgccga accaggttcg
    18841 atcatatcgg ttacggcacg gttgcgccgc tgttcgctgt ctgcccggcc gggtctgttg
    18901 ggatcgtagg cgggcgtatt ggccaaggcg aggatttccc ccgtgcgggc atccaaaacc
    18961 accaccgttc cggcttttgc ctgatggtat tcgaccgcct tgttcaactc ttcataggcc
    19021 aaggtctgaa tcctctgatc gagggaaagg atgatgtctt tgccgttttg cggtgcttta
    19081 ttgcgcgggg agtccaagct gtccacaata ttgccctgcc ggtcccgcaa aacaacttcc
    19141 gcgccgtctt cgccatacag gctgtcttca agcgaaagtt ccaaaccttc ctgacctttg
    19201 ccgtcaatat cggtaaatcc gatgacgtgt gcaaacaggt tgcccatcgg gtaatggcgt
    19261 tttaattctt tttcaaatac aaagttttcc aaacccaagg ctttgacctc ttcggcaacc
    19321 ttgggatcga gctgccgctt gatccaaata aacgacttgc ctttctgttc gagtttgttc
    19381 ctcaaaacat cgaccggcac atcgacaagc tcggacaggc gttccaattg ggcggcagac
    19441 ggcatttcct tcatatcttt aggcacggca aacagggact ccgtcggcgc gctcaacgcc
    19501 aaaaccgcac cgttccggtc cgaaaccgta ccccgtgtag ccggcaatgc ttgagtccgc
    19561 acaatccggt tgtcgccctg ttctttcaaa aagttatacg ttaccgtctg cagatacagc
    19621 ccgcgggcaa tcagacaggc aaacaagacc gccattgcca tcaggacgaa gctaatccgt
    19681 ccgttactgg tcatcggctt tttgacctgc tcttctttgg gcagcatccg gggcttatat
    19741 tcgcttttaa tcaacatttt tacttctcgt tattattatc ctgatgcagg aatccgattc
    19801 cggcacacag gctgcttcta tctttgatgt tccaccataa aggtattgcc cgaaaccggc
    19861 ggatggaggt tttgtttttc tgccgccgcc ctgatcgctt cgtgattcgc caaacgcgcc
    19921 tgttgcaccc tcatttgcgc ataatcctgc tccaaggcga tttcctgttt tttcgccttg
    19981 tccaaagctg tgaagttgag cctgtactgg ttttgctgca tcacaacgga aaaagcggaa
    20041 acgcacaccg caagcagcag aaagaaattc gatttgttca ttgccgttca gacgtttttc
    20101 tctgttatta ttccggtatc ggaccggcag tccgctccgc cacacgcaaa actgcgctcc
    20161 tcgccctcgg gttggcggca atttccgctt cacccggctt taatgccctg cccacgattt
    20221 tcaggggcgg ctcgggcaaa tccgcttctc tgaccgccgc ccagctcggc aggggctcgt
    20281 gttgcgaata ttttttgaca aactgcttca caatgcggtc ttccaacgaa tggaaagcaa
    20341 tgaccgccaa acgcccgccc tctttcagac ggcacatgac ctgcggcaat accgccccta
    20401 cttcttcaag ctcgcggtta ataaagatgc ggattgcctg gaaggtgcgc gtcgcaggat
    20461 cctgcccccg ctcgcgagta cggacgtttt gtgccacgat ctgcgccagc ttgcgggttg
    20521 tatcgattgg actttccgcc cgttgcgcga caatggcgcg cacaatctgg cggctaaacc
    20581 gctcttcacc ataattcttg attacctcgt gcaaatcctg ttccgacgca accgctatcc
    20641 actctgcggc agacataccg cgcgtcgtat ccatacgcat atccaaaggg gcatcgaaac
    20701 ggaagctgaa accgcggctg ccgtcatcga tttgcggaga cgaaatcccc aaatcaaaca
    20761 gcgcaccgtc caccttgccg atacccaaac cgtccaatgc cgtctgaaac gaagcaaaac
    20821 cgccatgcac gacaccgacc cgtttgtccg aacgcgccag ctcttctgcc acagcaatcg
    20881 cctgcgggtc tttgtcgaaa acaatcaacc gccccgcatc gcccaaacgc gacaaaatca
    20941 gccgggaatg ccctcccctg ccgaacgtac cgtccacata gacaccgtct tcgcgcacgg
    21001 caagcgcatc caccgcctca ttcagcaaga ccgtgatatg ccggtaactt tctgctccac
    21061 tcacaattgc aaatccgtct gactcaactg gaaggcaagt tcgtcaggat cgtcatccaa
    21121 agcctgaacc atctcagcct cccactgctc gcgaccccaa agctccaaac ggttggcacg
    21181 gccgaccaaa acaacttcac ggtcgaaatc cacccttttc ctcagtccgg caggaaccag
    21241 caccctgccg gcgctgtccc attccaaaat ttccgcgtta tgcagcaaaa gattttgaaa
    21301 ccgccgcaaa acagggttat ccgccacttt taagtttaaa agttgcgccg caaccttttc
    21361 ccactccgca acagggtaca tcaacagctt atgtttcgac tcgagcgttg ccactacggc
    21421 aggcgtatag aggcgcgaca gaatgtcgcg gaatttggca ggaacagcca accgcccctt
    21481 actgtcgatg cttaattcgt gtgcgccgcc gaacatgaca tgtcccaagc cgaaatcaaa
    21541 atcacaaggg taaaagagac actttgcccc acaattcccc accaatcgac actataagaa
    21601 attttaaaca ctcggtcaaa tcagggcatg aaaactcatt aacatatctg aaatttttat
    21661 tctgtttaaa aacaataaga taaaaaatga cgacaacggc acggcgggtg cagtacagag
    21721 tgaccg
//
LOCUS       DAWXHA010000021        21310 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.021, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000021 DAWXHA010000000
VERSION     DAWXHA010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21310
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.021"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            94..339
                     /locus_tag="AABD07_000624"
     CDS             94..339
                     /locus_tag="AABD07_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFB2355208.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEGLHHDTGHIGWEAMNKGR"
     gene            342..732
                     /locus_tag="AABD07_000625"
                     /pseudo
     CDS             342..732
                     /locus_tag="AABD07_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(772..2229)
                     /locus_tag="AABD07_000626"
     CDS             complement(772..2229)
                     /locus_tag="AABD07_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HFB2355209.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHALATL
                     SLGGFSTHDASIGYYNSPLIEAVIIVFTIFGGINFASHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGHYAGFGESLRYTAFNFVSIGLANGLSNTDFAQWPLLIS
                     LWMFFLANILASSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(2244..3074)
                     /locus_tag="AABD07_000627"
     CDS             complement(2244..3074)
                     /locus_tag="AABD07_000627"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HFB2355210.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLYLLAVGCGEGALKRSDTIEPILKHPDGGKMLDWL
                     RAQPLLIREGGRVMIHAGILPQWRIAKAESLAGEAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     HTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            complement(3151..3540)
                     /locus_tag="AABD07_000628"
     CDS             complement(3151..3540)
                     /locus_tag="AABD07_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFB2355211.1"
                     /translation="MSKTVIHTDKAPAAIGAYSQAVRAGGTVYMSGQIPLDPATMTVV
                     GNGDFHTEARQVFQNLQAVAEAAGGSLDDIVKLNAYLTDLGNFAVFNEVMAEFITEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            complement(3687..4214)
                     /gene="nspA"
                     /locus_tag="AABD07_000629"
     CDS             complement(3687..4214)
                     /gene="nspA"
                     /locus_tag="AABD07_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HFB2355212.1"
                     /translation="MKKALAALIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKQAPSTDFKLYSIGASVIYDFDTQSPVKPYF
                     GARLSLNRASAHLGGSDSFSKTSAGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVK
                     NVRSGELSAGVRVKF"
     gene            complement(4657..5832)
                     /locus_tag="AABD07_000630"
     CDS             complement(4657..5832)
                     /locus_tag="AABD07_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HFB2355213.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTVEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIATDATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGTLEGAGLIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVFRPTEKGRLFLNDLLQCFL"
     gene            complement(5889..8360)
                     /gene="ligA"
                     /locus_tag="AABD07_000631"
     CDS             complement(5889..8360)
                     /gene="ligA"
                     /locus_tag="AABD07_000631"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HFB2355214.1"
                     /translation="MNPTAQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEA
                     LERNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYA
                     FDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTRNVKTV
                     ANIPLRLHGENTPELIEVRGEVLMLKADFAGLNKRQAENGQKPFANPRNAAAGSLRQL
                     DSRITAQRKLHFFPYSIARQQGGFEAEEHIQELAYFQELGFSLPNGNFGCFKNIGEVL
                     AFYEHMQQKRPELPYEIDGMVVKVNSLAQQRELGFISRAPRWAVAHKFPAEEALTIVE
                     AIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDV
                     IPEVVRVIFERRPMQETAVAVSDGIGHQQDDLFAETPSAKQTESVPLHKPYRLPARCP
                     ICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDL
                     VRHFADLYRIDIPTLQKMKETADKGSSENENGDAETVSGDLSKYNTQNGKKQPTKWAQ
                     NILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDI
                     GTVVARSIAHFFAQAEQQAMIDELLAAGVAPQAQAVSLPAAQYAGPQRWITRLPGFKI
                     SENKAQALWELAGQSIEGLQNDKALPADWQAWRSKAQNTALLENLKTFFAQMPSEDEA
                     AQGSDGINKAVAGKTFVLTGTLPTFKRDQAQALIEAAGGKVSGSVSKKTDYVVAGEAA
                     GSKLEKANALGVSVLSEAELLTLLC"
     gene            complement(8494..9780)
                     /locus_tag="AABD07_000632"
     CDS             complement(8494..9780)
                     /locus_tag="AABD07_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HFB2355215.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGPVMMPKPQPAVKKPAKPQDSAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEEIGIIGNSAHTVSEPQTGHSAPKPADAPAKPVPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQADAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            complement(9974..10546)
                     /gene="ampD"
                     /locus_tag="AABD07_000633"
     CDS             complement(9974..10546)
                     /gene="ampD"
                     /locus_tag="AABD07_000633"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HFB2355216.1"
                     /translation="MDNHAGAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLHVSSHFLIARDGETVQFVSCGDMAYH
                     AGASSFRGREKCNAFSIGIELEGCDFEPFAEAQYRSLETLLAALCRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIREKGFPVDRNAV"
     gene            10630..11625
                     /gene="mltG"
                     /locus_tag="AABD07_000634"
     CDS             10630..11625
                     /gene="mltG"
                     /locus_tag="AABD07_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HFB2355217.1"
                     /translation="MLKKMLKWTAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIGHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLQIYQTAYKAMQRRLNEAWAGRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            11685..12305
                     /locus_tag="AABD07_000635"
     CDS             11685..12305
                     /locus_tag="AABD07_000635"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HFB2355218.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQAREKDRFEQEQAD
                     FFMRVRGVYLDRAAACPERYAVIDSNRSLDEVRNSIEKVLDGHFGC"
     gene            12527..13807
                     /locus_tag="AABD07_000636"
     CDS             12527..13807
                     /locus_tag="AABD07_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HFB2355219.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTGKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRYTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGRRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLGEWKL"
     gene            13889..14170
                     /locus_tag="AABD07_000637"
                     /pseudo
     CDS             13889..14170
                     /locus_tag="AABD07_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272810.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            14209..15240
                     /locus_tag="AABD07_000638"
     CDS             14209..15240
                     /locus_tag="AABD07_000638"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HFB2355220.1"
                     /translation="MPNFFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKWRADF
                     LSGKRQSEKLSVPVVVVGNIHAGGTGKTPIAAALVSGLQEKGVKVGIISRGYGRKSKA
                     VYVLNAASRAEDAGDEPLLLFRKTGAPTAVGSSRVEAGRALLAAHPELELIVADDGLQ
                     HYALQRDVEIAVFPAADTGRTDLDLLPNGNLREPLSRLESVDAVVVGGRAADGFMPSE
                     HLFGSRIEAGAVYRLNRPSEKLDISTLSGKRVAAVAGIARPQRFFDTLTHMGIRLDQT
                     VALPDHADIFNRDLPPADVVLVTEKDAVKFSDGICTDNVWVLPVCAIIEPDLAEFVLE
                     RLEGVPKAV"
     gene            15446..15979
                     /locus_tag="AABD07_000639"
     CDS             15446..15979
                     /locus_tag="AABD07_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HFB2355221.1"
                     /translation="MKLKTLLLPFAALALCANAFAAPPGDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PEFTEELRRIICGGIVD"
     gene            16201..16383
                     /locus_tag="AABD07_000640"
     CDS             16201..16383
                     /locus_tag="AABD07_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HFB2355222.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARALSEEELKA"
     gene            16380..17141
                     /gene="kdsB"
                     /locus_tag="AABD07_000641"
     CDS             16380..17141
                     /gene="kdsB"
                     /locus_tag="AABD07_000641"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFB2355223.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAA
                     RVVVATDHPDIQTACQAHGIEVVMTSNRHESGTTRLAEAAAALKLPPHLIVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAGHELHDFDELMNPNAVKVVLDKNGNAIYFSRAP
                     IPYPRDAMRAGKREMPSETAVLRHIGIYAYRVGFLQRYAEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRVRAVFQTV"
     gene            17164..17460
                     /locus_tag="AABD07_000642"
     CDS             17164..17460
                     /locus_tag="AABD07_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFB2355224.1"
                     /translation="MQQHIEKWQHLSREEQKILAEVWGLVQNDDQEVHYEMLKLNAPD
                     EVSGEFWFRMAETLSTLPPNRSLDLRMNGGRLSTAVSILSVMIEDNPDIPQLWA"
     gene            17482..17679
                     /locus_tag="AABD07_000643"
     CDS             17482..17679
                     /locus_tag="AABD07_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355225.1"
                     /translation="MVHGHKARADGLVQQPDKAAEANEEEYLTKALSQNLLSTLDASL
                     ARFPEDAWFQEIKQDAQKHFA"
     gene            17836..17928
                     /locus_tag="AABD07_000644"
     tRNA            17836..17928
                     /locus_tag="AABD07_000644"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17870..17872,aa:Ser,seq:gct)
     gene            18202..18987
                     /locus_tag="AABD07_000645"
     CDS             18202..18987
                     /locus_tag="AABD07_000645"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HFB2355226.1"
                     /translation="MSRIRQAFAALDGGKALIPYIAVGDPDIRTTLALMHGMVASGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PIHKMGYREFAQEAAKAGVDGVLTVDSPIETIGSLYRELKDNEVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLRQYIDIPIGVGFGISNAESA
                     RKIGRVADAIIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            19024..19896
                     /locus_tag="AABD07_000646"
     CDS             19024..19896
                     /locus_tag="AABD07_000646"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HFB2355227.1"
                     /translation="MSWLDKILPPKIKNRGKDGSSNVPEGLWRKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEEGREEVAGNVKPTDPLKFKDSKKYPDRLSAA
                     RKLTGEDDALVVMKGMMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAT"
     gene            complement(19956..20567)
                     /locus_tag="AABD07_000647"
     CDS             complement(19956..20567)
                     /locus_tag="AABD07_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cryptic protein cnp1"
                     /protein_id="HFB2355228.1"
                     /translation="MRRAIFLILTLTVGTSLAAGFSQKDTPINTRYRETPEEAAAREF
                     KEHTAELPPLPDAHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARSSIGFGNGKLSSYKVFGYGDTVNSRWIQPRNAEWKPIGGTLGRN
                     DALRAVLYQAFCEGGVPADTQGLVQRLKERAGRYAPSMKPHDK"
     gene            20675..20899
                     /locus_tag="AABD07_000648"
     CDS             20675..20899
                     /locus_tag="AABD07_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HFB2355229.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKVLAQMRQGEVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDSSEQDGVFTLVVKHK"
     gene            20930..>21310
                     /locus_tag="AABD07_000649"
     CDS             20930..>21310
                     /locus_tag="AABD07_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355230.1"
                     /translation="MLLLSAFVLAACNAQNRQSGVRHQDFARVAVDLFRSACVLTQGS
                     FEPVSKFAAVGHFVPVGKEDLSRLPPAVAEPDVQALWTLERDGGIYYLSLTRDSCSVK
                     AERADSAALLEHFSGLVRQPPKNAN"
BASE COUNT         4646 a         5200 c         6463 g         5001 t
ORIGIN      
        1 cgatgatttt tattagctaa tttaagtaat ttaagcaagt tttttagata ctgaaactgg
       61 taattatgtt tatgtaagca taaggagttc agattgaagg attctacagg gcaaatgagg
      121 ctggcaacca aggatttggc ggaagccatt aaacgaggag aagtacgtag ttctgctttt
      181 acaacaaagc aactaaaggc aatcgaaaaa ggagaatcta aaataccgga ttacacttgg
      241 catcatcatc aagacactgg aaggatgcaa ttgattaatg aaggcttgca tcatgatacc
      301 ggccatattg gttgggaagc aatgaacaaa ggaaggtaac tatgtggaaa atcataaaag
      361 aggatagtga tgatttagaa tttgcaatta aatgcttatt ctctcagtct attgatttaa
      421 atgaattcaa gttatggatt gaacaagtaa tacgcgatat gcccatcgag gacatccctt
      481 tttatatttt tgacttggcg gatttcaatg ggggaattgg agacattgac aatattgtag
      541 gttttgtttc gagttacagc ctatcaaaat cgaaaaaaaa tgccttgaca ggcattgcct
      601 tcttaagggg gatagatgtc tatagaccct cccgtttcaa aagaaaaagc attaaaagcc
      661 ttagagaaat atcctgaaat ttatcataaa tttaaatggt tctttccttt tgtagagctt
      721 ccgcttcttt aaaggacaat atgccgtctg aaaagttttc agacggcatt tttatttctt
      781 ccagtaggcg ggggtgaaga ggatgaagac ggtgaagatt tccagcctgc ccaagagcat
      841 tgcggtaacg cagatccatt tctgcatcac gtccaaaccg gcgtaattgc cggcgggccc
      901 gacttcgccc agtccggggc cggcgttggt aatgcaggcg atgacggcgg taaaggcggt
      961 ggtaaattcc ataccgctcg ccatcagcag gaagctgaag aggacgacgg tcataaagta
     1021 gatgaagatg aaggacataa cggtcagcgc gaggcggtcg ggtatggctt tgccgctgat
     1081 tttgacggtg cggacggctt tggggtgcag cagcaccatc atttcgcgca ggctgaattt
     1141 gaacaggacg agggcgcgta tggttttgat gccgccgccg gtcgagccgg agctggcgag
     1201 gatgttggcg aggaaaaaca tccacaggga aatcaggagc ggccattgtg cgaagtcggt
     1261 gttggacagc ccgtttgcca atccgatgga gacgaagttg aaggcggtgt agcgcaggga
     1321 ttcgccgaag ccggcgtaat ggccggtgtg ccacaggtac agggcggcgg caaggatgct
     1381 gccggagagc agcagcagca tcgtccggca ttcttcgtct ttccaatagg ttttgaggct
     1441 gcggctgttg agggcggcga aatggctggc aaaattgatg ccgccgaaaa tagtgaaaac
     1501 gatgatgact gcttcgatga ggggggagtt gtaataaccg atgctggcat cgtgggtgga
     1561 aaacccgccc agcgagaggg ttgccagcgc gtgacagacg gcatcgaacc aacccatccc
     1621 ggcaaaatgc aggcaggctg ccgcgaggat ggtgatcagg gtgtagccga accagagttt
     1681 tttcgccact tgggaaatgc gcggcgacat tttgctttct ttgtcaatgc cggggatttc
     1741 ggctttgaat aactgcgtgc cgcctacgcc gagcataggc aggatggcga cggcaaggac
     1801 gatgatgccc atcccgccca gccagttgag catatgccgc caaaagttga cggagggggc
     1861 gagcccgtcg acgtggggga tgacggtcgc gccggtggtg gtcagtcccg acatcgattc
     1921 aaaaaatgcg tcggtaaagc ccatattcgg gaaatacagg tacatcggca tcgcagccat
     1981 agcggcaaac gccagccaca acatcaggac gagggtgaag ccgtcgcgcg ggcgcagttc
     2041 gcgcctgaac cggagggtgg cgagccggac gatgcacgag ccggaaaggg taacggtcgc
     2101 ggtggtggcg aatgcggtgt acgcgccgtc cgaaaaggcg taggaaaggg cggcgggtat
     2161 cagcaggata aaggaaaaca gcatacccag gcgggagagg acgtgggcga tgggcaggat
     2221 tttgtgcata gtggggcggt ccgttatttt gcgaagcttt tccagtctat gccgccggcg
     2281 gcttggactt gggtaatttc ttccgtttcg aggttgacgg cggtcagctg cccgccccac
     2341 agcgcgccgg tgtccagcga gatgacgttg tcggcattcg tgtagcccag cgaggaccag
     2401 tgtccgaaga tgatggtatg gtcgaggttt tgccgatcgg gggctttgaa ccacgggcgc
     2461 aggtaaggcg gcattttttt cactgtggat ttgtagtcga aatccagttc gtttttaaag
     2521 gtcagggcgc gcatccgcgt gaaggcgttg acgatgaagc gcaggcgggc atagccttcc
     2581 aaaccttcgt cccatgcggc cggtttgttg ccgtacattt tggagaagaa tttgacgtat
     2641 tttttgccgc gcagttcggc ttcggcttct ccggcgagcg attcggcttt ggctatgcgc
     2701 cattgcggca ggatgccggc gtgtatcatc acgcggccgc cctcgcgtat caaaagcggt
     2761 tgcgcgcgca gccagtcgag catttttccg ccgtcggggt gtttgagtat gggttcgatt
     2821 gtgtcgctgc gtttgagcgc gccttcgccg cagccgacgg cgagcaggta caggtcgtgg
     2881 ttgccgagga cgatttgcac gctgttttcg tgccggatgc agaattgcag cgtttcgagg
     2941 gatttcgggc cgcggttgac gatgtcgccc gtcagccaga gggtgtccgt gccgtggttg
     3001 aagccgattt tgccgagcag cgcggtcagt tcgtcgaaac agccttggat gtcgccgatt
     3061 gcgtaatgtg ccattgcggg tgttgtgaag tgggaaagtg ttgcggttcg gacggcacgg
     3121 ttggaaatct tatgccgtcc gaacgtggaa ttatgcgttc aaaacgagga cggcttccgc
     3181 ttcgacctgc acgcctttgg gcagcgaggc aacgccgacg gcggcgcggg cggggaacgg
     3241 ctcggtgata aattccgcca tcacttcgtt gaagacggca aaattgccca agtcggtcag
     3301 gtaggcgttg agtttgacga tgtcgtccag cgaaccgcct gccgcttcgg cgacggcctg
     3361 caggttttgg aacacttggc gcgcttcggt gtggaaatcg ccgttgccga ccacagtcat
     3421 cgtggcggga tcgagcggaa tctgaccgct catgtaaacg gtgccgccgg cgcgcacggc
     3481 ctggctgtat gcgccgatgg cggcgggggc tttgtcggta tggatgacgg ttttggacat
     3541 ttcggattcc tcaaaaaata gggcggcaga agccgcagcg ttcgggatta tcgtacaaaa
     3601 ccgccggctt gtgtagtttt aggcggtata tgtgccggaa acaaaaaacc gccgaaggct
     3661 cggcggtttg cggaataacg cgtatatcag aatttgacgc gcacgccggc ggacagttcg
     3721 ccggaacgga cgtttttgac agtgttgact ttgccgatgt agttgtagcg gtagccggca
     3781 tccagatcga cattgggtgt aacggcatag cttacgcccg ccaatacgcc gaggccggcg
     3841 gaggttttgc tgaagctgtc gctgccgccc aagtgggcgg aagcgcggtt gaggctcaag
     3901 cgcgcgccga aatacggttt gacgggcgat tgggtgtcga agtcgtaaat gacggacgcg
     3961 ccgatgctgt aaagtttgaa atcggtggat ggggcttgtt tatagttttt gtagcgcgtg
     4021 taatcgacgg cgaagcggag gtcgttgatg cggtagcctg cggagatgcg cgggctgaag
     4081 cctttggcag aacctaaaga gcttgaggct ttggcgtgtg cggcatcggc ttggacgtaa
     4141 aagccggatg cgccttccgc cagtgcggcg gccgggagtg cgagggcaat cagtgcggca
     4201 agtgcttttt tcatattttg gttcctttat ggtcagggag aaaaattgtt aataatccgt
     4261 taaagaatcc tgccgtatta tactgaaatt ttctttttgc atcgtaatat tttcaatgcc
     4321 tcaagatacg cggcggcatc cggctgcttt gccgacggca aagccgttaa cccgcgcgtt
     4381 gcccttaaac ggcggcatca cgcggcggat gggtgaaact tgcaaacggt ttggaaaaaa
     4441 ccgcaaaggc ggggcggcgg catttgtcag attgttgcag gcgcaggcgt acggtttttt
     4501 gtgtgcggcg ttaccttagg cgtcggacat ttccggcggc ggctgtgccg tctgaaacgc
     4561 ccggcggggg atgcggctgc gtttcccatc gataggcata tttgccggcc gcgttcgggg
     4621 cgggttttac ccgggcggcc gccgatttgt ttgcgcttat aaaaaacact gcaacaaatc
     4681 gtttaaaaac aagcgtcctt tttcggtcgg gcggaatacg gtcgggtcgg tttccagcag
     4741 gcctttttgc cttgccgttt cgatttgcac catgattttg gcggcgggta cgcccgtgcg
     4801 ctcctgcaac atcgcggcgg gtacgccgtc ggtcaggcgc agggcgttca tcatgaattc
     4861 gaacggcaaa tcttcggcgg cgacggtttt gcgttcgacg gcttcgcccg gctgactttg
     4921 cattaaggcg aggtagtcgt tggggtggcg gcggcggacg gtgcgctcga tgcggtcggg
     4981 ataggagatt ttgccgtgcg cgcccgcgcc tatgcccaaa taatcgccga actgccagta
     5041 gttcaaattg tggcggcact gcatggtggg tttcgcaaaa gccgatgttt cgtagtggat
     5101 aagacccgcg ccttccagtg tgccgtgtac cgcgtcttcg atgtcgagcg ccgcttcgtc
     5161 ttgcggcaaa cctttcggcg gcgtatgacc gaacggcgtg ttcggctcca tcgtcagatg
     5221 atatgcgctg atgtgggttg cgtctgtggc gatggcggtt tgcacgtcgt ccaatgccgt
     5281 ctgaacggtt tggttcggca gggagtacat caagtcgata ttgactttat caaataattt
     5341 taaggcggta tcgatagcgg ttaaggcttc cttgccgttg tggacgcgcc ccagccttga
     5401 gagcatatcg tcgttgaagc tttgtacacc aatagaaagc cgcgtgatgc ctgcgtcttt
     5461 aaatccttga aacttctcga tttcaactgt acccggattg gcttccaacg taatttccgc
     5521 ttcgggctgc aagcgcaaca gcgaacgcac gccgcttaac aaacggtcaa tcgattccgc
     5581 ctgaaacagg ctgggcgtac cgccgccgaa aaatatcgtt tccaccggcc tgccccaaat
     5641 attgggcaat tcaagctgca agtcggtcag cagcgcgtcg atataggcgg cttcgggcaa
     5701 tccgtttttc aggctgtggg aattgaagtc gcaatacggg cattttttga tgcaccacgg
     5761 gatgtggata tagagcgaca ggggcggcag ggcggtgagt cgggtgcggt ttggaaagga
     5821 aatggtgtgc atggtgcggt tcggaaaagt ggacgatgcc gtctgaaggc ggttcggacg
     5881 gcatgggttc agcagagcag ggtaagcagt tcggcttcgc tgaggacgga aacgcccaag
     5941 gcattggctt tttccagctt gctgcccgcg gcttctccgg cgacgacgta gtcggttttt
     6001 ttggacacgc tgccggacac tttgccgcct gcggcttcga ttagggcttg ggcttggtcg
     6061 cgtttgaagg tgggcagggt gccggttaac acaaaggttt tgcctgccac ggctttattg
     6121 atgccgtctg aaccttgcgc cgcctcgtct tcagacggca tttgcgcgaa gaaggttttt
     6181 aggttttcga gcagggcggt gttttgcgct ttgctgcgcc acgcctgcca gtcggcaggg
     6241 agggctttgt cgttttgcag tccttctata ctttgtccgg cgagttccca taaggcttgg
     6301 gctttgtttt cgctgatttt gaaaccgggc aggcgggtaa tccagcgttg cggcccggca
     6361 tattgtgcgg caggcaggct gacggcttgg gcttgcgggg caacgcctgc ggcgagcagc
     6421 tcgtctatca tcgcctgctg ttcggcttgg gcgaagaagt gggcaatgga acgcgccact
     6481 accgtgccga tgtcgggcag gcaggcgagg acgggttcgg gggcgcggcg gacgcgttcc
     6541 aatgtgccga atgcctgcgc cagcgttttg gcggtgcgtt cgccgacgtg gcggatgccg
     6601 agcgcgaaca ggaagcgggc aagttcgggc gttttgccgg attctatgcc tgcgaggatg
     6661 ttttgcgccc acttggtcgg ttgttttttg ccgttttggg tattgtattt agacaggtcg
     6721 cctgaaaccg tttctgcgtc gccgttttcg ttttcagatg accctttatc cgccgtttcc
     6781 ttcatttttt gcagggtcgg aatatcgatg cggtagaggt cggcgaaatg gcggacgagg
     6841 tcttgggcga ccagctgttc gatttgtttt tcacccaagc cgtcgatgtc catcgctttg
     6901 cgcgaggcga agtggattaa gccttgcgcg cgttgtgcct gacaaagcat accgccgctg
     6961 catcgggcga cggcttcgcc ttcttcgcgt tcgatttcgc tgcggcagat ggggcagcgg
     7021 gccggcaggc ggtagggctt atggagcgga acggattcgg tttgcttggc ggacggtgtt
     7081 tcggcaaaca ggtcgtcctg ctgatgcccg atgccgtctg aaacggcaac ggcggtttcc
     7141 tgcatcgggc ggcgttcgaa aatcacgcgc acgacttcgg gaatcacgtc tccggcgcgg
     7201 cgcacgacga cggtatcgcc gacgcgcacg tctttgcgcg atacttcgtc ctgattgtgc
     7261 agggtggcgt tggtaacggt tacgccgccg acgaatacgg gttgcaggcg ggcaaccggc
     7321 gttaccgcgc ccgtcctgcc gatttgcacg tcaatcgctt cgacaatggt cagggcttct
     7381 tcggcaggga atttgtgggc aaccgcccaa cgcggcgcgc gggagatgaa gccgagttcg
     7441 cgctgttgcg ccaagctgtt gactttgacc accatgccgt cgatttcgta gggcagttcg
     7501 gggcgttttt gctgcatgtg ttcgtaaaac gccaatactt cgccgatatt tttgaaacag
     7561 ccgaaattgc cattgggcag actgaagccg agttcttgga aataggcgag ttcttggatg
     7621 tgttcttcag cttcgaaacc gccttgctga cgggcaatcg aataggggaa aaagtgcagt
     7681 ttgcgttgcg cggtgatgcg cgaatcgagt tggcgcaggc tgccggcggc ggcgttgcgc
     7741 ggattggcaa agggtttttg cccgttttcg gcttggcgtt tattgagccc ggcaaagtcg
     7801 gctttgagca tcagcacttc gccgcgtacc tcgatgagtt cgggcgtatt ttcaccgtgc
     7861 agccgcaggg ggatgttggc gacggttttg acgtttcggg taacgtcttc gccggtcgta
     7921 ccgtcgccgc gtgtcgccgc ctgcaccaat acgccgtcgc ggtagagcag gctgatggcg
     7981 aggccgtcga atttgggttc gataacgtat tcgggattgc cgccgtccaa gccgtcgcgc
     8041 acgcgttggt cgaaggcgta catttcggca tggtcgaaca cgccgttttc atcttgcggg
     8101 gaaaaggcgt tggtcagcga cagcatcggc acttcgtggc gcacttcggc aaagcctgcc
     8161 aaaggctcgc cgccgacgcg ctgggtcggg ctgtcgggca gcttgagctc gggatggttt
     8221 cgttccaacg cttcgagttc gcggaacagg cggtcgtatt cggcatcggg tatgctgggc
     8281 gcgtcgaggg tgtagtattc gtaggcgtag cggttgagga ggtcggtgag ttcgtgtatg
     8341 cgttgtgcgg tcgggttcat ggattcgtac aggttcagac ggcatggaca aatgccgtct
     8401 gaacggtaaa acgtgttgga aatggtcgga ttttacctga aaacaaaagg cggatgcacc
     8461 gttgccgatg tatccgcctt tgtgtttgcg gagttatgaa aacaggcgca gggcggtttt
     8521 gccgcccggt tcgataccga ctttgagcat ctcggactga cgcgccaata cataagtgcg
     8581 tacgtctttg agccattggg tcgaaacttc ttccattttg tcgttgacca gattcaggtt
     8641 caactgaccg gacaggcgta ccgccaaatc cataaacaaa tcgtcgaagg ttttttcgcc
     8701 tgccggagag tgcgggatgt cgagcagcat actgaagcct ttgtaggact ggttgtccaa
     8761 aagggcattg gtaaacggct cgttgttgag cgagcagatg gagaacatgg tcgagcccga
     8821 cgtgtcggta tagtggaacg cgccgtcgtc ttccaaaacg aaacccacgc ccgttacggc
     8881 ggaacgcagt tctacgccgc tgatgctggt cggcgaaacc aaatggatgg cgatggtctg
     8941 gtcgacgcgc gcgcagaatg cgtccagtgc ggaagccact tcgataaagg cggcaaggtc
     9001 ggtgtgcagc gtctgaccgc ccatgctttg tgcgaatgcg tccgcctggc ggttgaatgc
     9061 ggagagttct tcctgcgagg caagtccgtt gcggctgact gcctggatac ccacgataaa
     9121 tgcctgatag cggatgcccg ggatgggttc ggcaatctgg aaatggtcgt ccatggtgca
     9181 gccgacaatc tggtagcggc agcggttgga aaggcgcggc agtgcgtgca gttctttggc
     9241 ttcggtcagc gcgatatagg agatgaagtc gaagcgcacg tcaaaccagg gcagctcgac
     9301 cttcgacagc tctttgagcg taatcagcgg ttttgccggc gtttgcggaa cgggaacggg
     9361 ttttgccggc gcgtcggcag gtttcggtgc ggaatgtccg gtttggggtt cggaaacggt
     9421 gtgggcggag ttgccgataa tgccgatttc ttccaaggcg gtttcgattt cggttttgaa
     9481 cggggaggct tttgcctgtt tctgcttggc gatgtagacg gcatcctgtt cttgcaggtt
     9541 gcgcatggcg gagtcttggg gtttggccgg ttttttgacc gccggttggg gtttcggcat
     9601 catgactggc ccgccggacg gtttgccgtc gcggacatgg ctggttttgc tgttgagcag
     9661 ggcatctttg tcggagtgtc cgaactggtc gcgcactttt ttgcggtatt ggttttcctg
     9721 atacatattg taggcgacaa cggcgaggac ggcggcgagg aacagtacga tgtaaatcat
     9781 ggcaatcact ttaaatttcg ggatgcagga tgcgcaaagt gcgggtactg cggttaaatc
     9841 gggcttgcgt ttccggcagt ctgacggaac ggccggttat aacgtttgaa ttataacgaa
     9901 aattgcaggg tctgacagca gtgtgtcgaa ataagcggaa attttccgaa atgccgtctg
     9961 aaatctgtgg ttttcagacg gcatttctgt ccacgggaaa ccctttttcc cgtatccgcc
    10021 gccagtcgaa aaaatggccg gggtcggttt tgcggccggg tgcgatgtct tggtgtcccg
    10081 ttaccgccgt gatggggtag cggcggcaga gggctgccaa cagtgtttcg agcgaacggt
    10141 attgcgcttc ggcaaacggt tcgaaatcgc agccttccag ttcgatgccg atggaaaacg
    10201 cgttgcactt ctcccgcccc cgaaacgagg atgcgccggc gtggtacgcc atgtcgccgc
    10261 atgatacgaa ctgcaccgtt tcgccgtcgc gtgcaatcag gaaatggctg gacacgtgca
    10321 aagtgtgtat caggctgaag aacggatgtc cgtcggggtc gagccggttg gcaaacagct
    10381 tttccaccgc atccgtgccg tattcgaacg gcggcagcga aatgttgtgc agcacgatca
    10441 gggaaaccgt ttctcccgtt tccctcgggc tgaaattggg cgacggggta tggcgtatgc
    10501 tttgaagcca gccgttttgc cagtgtgctc cggcgtgatt gtccatgatg ttcttcctgt
    10561 ccggcgggca atttgggtta tactgtcgcc cgaattttaa gacgtattcc gaatgctggg
    10621 aatcctacca tgttgaaaaa aatgttgaaa tggactgccg tttttttgac cgtatcggca
    10681 gccgttttcg ccgcgctgct ttttgtccct aaagacaacg gcagggcata ccgaatcaag
    10741 attgccaaaa atcagggtat ttcgtcggtc ggcaggaaac ttgccgaaga ccgcatcgtg
    10801 ttcagcaggc atgttttgac ggcggcggcc tacgttttgg gtgtgcacaa caggctgcat
    10861 acggggacgt acagattgcc ttcggaagtg tctgcttggg atatcttgca gaaaatgcgc
    10921 ggcggcaggc cggattccgt taccgtgcag attatcgaag gttcgcgttt ttcgcatatg
    10981 aggaaagtca tcgacgcaac gcccgacatc ggacacgaca ccaaaggctg gagcaatgaa
    11041 aaactgatgg cggaagttgc gcccgatgcc ttcagcggca atcctgaagg gcagtttttt
    11101 cccgacagct acgaaatcga tgcgggcggc agcgatttgc agatttacca aaccgcctac
    11161 aaggcgatgc aacgccgcct gaacgaggca tgggcaggca ggcaggacgg gctgccttat
    11221 aaaaaccctt atgaaatgct gattatggcg agcctgatcg aaaaggaaac ggggcatgag
    11281 gccgaccgcg accatgtcgc ttccgtcttc gtcaaccgcc tgaaaatcgg tatgcgcctg
    11341 caaaccgacc cgtccgtgat ttacggcatg ggtgcggcat acaagggcaa aatccgtaaa
    11401 gccgacctgc gccgcgacac gccgtacaac acctatacgc gcggcggcct gccgccaacc
    11461 ccgattgcgc tgcccggcaa ggcggcactc gatgccgccg cccacccgtc cggcgaaaaa
    11521 tacctgtatt tcgtgtccaa aatggacggc acgggcttga gccagttcag ccatgatttg
    11581 accgaacaca acgccgccgt ccgcaaatat attttgaaaa aataaaccat gccgtctgaa
    11641 aagtttgtgt tttcagacgg cataccctta ccggaactgc aagcatgaaa ccgcaattca
    11701 tcactttgga cggcatagac ggtgccggaa aatccaccaa ccttgccgtc atcaaggcat
    11761 ggtttgaacg gagggggctg cccgtgctgt tcacgcgcga gccgggcgga acgccggtcg
    11821 gtgaggcctt gcgcgaaatc ctgctcaacc ctgaaaccaa agccggtttg cgtgcggaaa
    11881 cactgatgat gttcgccgcg cgtatgcagc acatcgagga agtcatcctg cccgcgcttt
    11941 cagacggcat ccatgtcgtg tccgaccgtt ttaccgatgc gaccttcgcc tatcagggcg
    12001 gcgggcgggg gatgccgtct gaagacattg aaattttgga acattgggtg cagggcggtt
    12061 tgcgccccga tttgaccctg ctgttggatg tgccgctgga agtatcgatg gcgcgtatcg
    12121 gacaggcgcg cgagaaagac cggttcgagc aggagcaggc ggatttcttt atgcgtgtgc
    12181 gcggcgttta tctcgaccga gccgccgcct gtcccgaacg gtacgccgtt atcgacagta
    12241 accgcagctt ggatgaagtc agaaacagca tagaaaaagt gttggacgga catttcggct
    12301 gttgatgcgg caaatattga aacaagcgca tccgcccgcg ccgaaaacca aacggcagtg
    12361 ccgcaggtga aaatggcggt atgcgccaaa ctttcggcat gatagaatta cgctcggtta
    12421 caaggcagga tgcgtcggca atattaacga accgcccgta acatgatgac ccgaaagcgt
    12481 ttcggacagt tcgattcaaa tctttttctc gcaacaggat tgacacatgg aaaactcatt
    12541 gaaagaagcc gccctcaagt tccacgaatt acccgttccg ggcaaaattt ccgttacccc
    12601 gaccaaatct ctggcgaccg acaaagattt ggcgttggcg tactctccgg gcgtagccgc
    12661 cccctgtatg gaaatccatg ccgatccgca aaatgcctac aaatacaccg gcaaaggcaa
    12721 cttggtcgcc gtcatttcca acggtacggc cgttttgggc ttgggcgaca tcggcgcgct
    12781 ggcgggcaaa cccgtgatgg aaggcaaagg cgtattgttc aaaaaattcg ccggtgtgga
    12841 cgtgttcgac atcgaaatcg acgaaaaaga cccgcaaaaa ctggtggaca tcatcgccgc
    12901 tttggagccg actttcggcg gcatcaacct cgaagacatc aaagcacccg agtgttttta
    12961 catcgaacgc gaattacgca aacgctgcaa aatccccgta tttcatgatg accagcacgg
    13021 cacggccatc attaccgccg ccgccgtatt gaacgccctg cgttataccg gccgtaaaat
    13081 cgaagaagcg actttggtgt gctccggcgc aggtgccgcc gcgattgcct gcctgaacca
    13141 actgctggat ttgggcttga aacgtgaaaa cgtaaccgtt tgcgactcca aaggcgtgat
    13201 ttaccaaacc cgcgaagaca aagaccgcat ggacgaatcc aaaaaattct acgccgttga
    13261 agacaacggc cggcgcgtac ttgccgatgc ggttaaaggc aaagacatct tcttgggcct
    13321 ctccggcgca aacctgctga cgcctgaaat gttgaacacg atgaacgaaa aacccatcgt
    13381 gttcgccatg gccaacccga atccggaaat cctgccgccg ctggcgaaag aaacccgtcc
    13441 ggacgtggtt atcggtaccg gccgctccga cttcccgaac caagtgaaca acgtattgtg
    13501 cttcccgttc atcttccggg gcgcgttgga tgtcggcgca accaccatca acgaagaaat
    13561 gaaacgcgcc tgcgtgtatg ctttggcaga tttggcgatg gaagaagtaa ccgaagaagt
    13621 ggttgccgct tacggtaaga aattcgaatt cggcgcggaa tacctgattc ctactccgtt
    13681 cgattcccgc ctgctgcctc gcgtcgctac ggctgccgcc aaagcagcga tggaaagcgg
    13741 cgtggcaacc cgtccgattg cagatttgga agcttacgct gccaagttgg gcgaatggaa
    13801 gctgtaagcc gtttgtggtt aaaatgccgt ctgaactgtt ttcaggcggc attttgttgt
    13861 cagattgata aatgaaagat actggaaaat gaaagagatg aaacctgtcc gttatcatat
    13921 tggcgatata cccgaaactt caaaacaaac cgcccccggt catgacgaca gggcagtggg
    13981 tgttgacgat gattgttttc atgattcctt tggtcaatat cgttatgttt tttgtttggg
    14041 cgttcggcag aggcaacccc aaccgtgcca atttctgtaa agcactgttc ttatttacct
    14101 tgttggttcg cttatcggtt tgattttcat attgcttata ggtgggtctg catcgggtac
    14161 gcattattaa tgtgccggct gattctgctt cgaagatttg tatcgaatat gccaaatttt
    14221 tttaaatttc ataccgttat cgaacggcat tggcaaaaac cttatccggt tttgtctttt
    14281 ctgctcaagc cgctttccgg gctgtttgcc aaaattgcgg caaaatggcg ggcggatttt
    14341 ttatcgggaa aacggcaaag cgaaaagctg tccgtgcctg tggtcgtggt cggcaacatc
    14401 cacgcgggcg ggacgggcaa aacgccgatt gccgccgcgc tggtgtcggg cttgcaggaa
    14461 aaaggtgtca aggtcggcat catcagccga ggctacgggc gcaagagcaa ggcggtttat
    14521 gtattgaatg ccgcgagccg tgcggaagat gcgggcgacg agcctttgct gctgttccgt
    14581 aaaacaggtg cgccgacggc agtgggcagc agccgtgtgg aggcaggcag ggcgttgctg
    14641 gcagcgcatc cggagcttga attgattgtg gcggacgacg gtttgcagca ttacgccctg
    14701 caacgcgatg tggaaatcgc ggtgtttccg gcggcggata cggggcgtac ggatttggac
    14761 ttgctgccca acggcaattt gcgcgaacct ttgtcgagat tggaaagcgt ggatgcggtg
    14821 gtggtcggcg gcagggcggc ggatggtttt atgccgtctg aacatttgtt cggcagccgt
    14881 attgaggcgg gtgcggttta ccgtttgaac cgtccgtctg aaaaactgga tatttcgaca
    14941 ttgtcaggga agcgcgtcgc agcggttgcc ggtatcgcca ggccgcagcg tttcttcgat
    15001 actctgacac acatgggcat ccgccttgac caaacggttg ctctgcccga ccatgccgat
    15061 attttcaatc gggatttgcc gcctgccgat gtggtgctgg taactgaaaa agatgcggtc
    15121 aaattttcag acggcatttg caccgataat gtttgggtgc tgccggtttg tgcgataatc
    15181 gaacctgatt tggcggagtt tgtgctggag cggttggagg gtgtaccgaa ggccgtctga
    15241 aagcgcggtt tggacgaagt gataacggac tggaataaga acgccctacg ccgtcattcc
    15301 cgcgcaggcg ggaatctaag tctcgaattt tcaggaatgc ctaggagact tcagaaatcc
    15361 caaatctccg gatttccact tgggcaggaa tgagaaagcc ggttgtattt tttatctgca
    15421 ttaatcattc gttaaaggag tggatatgaa gctgaaaacc ttgttattgc ccttcgccgc
    15481 actggcattg tgtgccaacg catttgccgc cccgcccggc gacgcgtcgt tggcacgttg
    15541 gctggatacg cagaatttcg accgggatat agaaaaaaat atgattgaag gctttaatgc
    15601 cggatttaaa ccgtatgcgg acaaagccct tgccgaaatg ccggaagcga aaaaagatca
    15661 ggcggcagaa gcctttaatc gttatcgtga gaatgttttg aaagatttga ttacgcccga
    15721 agtgaaacag gctgtccgca ataccttatt gaagaatgcc cgtgaaatat acacgcaaga
    15781 agaaattgac ggcatgattg ccttttacgg ttcgcctgtc ggtcagtccg tcgttgccaa
    15841 aaatccgcgc ttaatcaaga aatcgatgag tgaaatagcg gtatcttgga ctgcattgtc
    15901 agggaaaatc gcgcgacatc atctgcccga gtttacggaa gagttacggc gcatcatctg
    15961 cggcggtata gtggattaaa tttaaatcag gacaaggcgg cgaagccgca gacagtacaa
    16021 atagtacggc aaggcgaggc aacgccgtac cggtttaaat ttaatccact ataaaaatcc
    16081 cgatgcgggc tgcaagcagg ccggacagct tgggaaaagg tatcagaagt aaataatagc
    16141 cgcctgaaat attgcggagg gcatccgatt gattaaacca tcaaacccga aagcaacctt
    16201 atggaaaaaa aattcttaga catcctcgtc tgccccgtta ccaaaggcag gctggaatat
    16261 catcaggaca aacaggaatt gtggagccgt caggcgaagc ttgcctatcc gattaaagac
    16321 ggcattccct atatgctgga aaacgaagca cgagcgttga gcgaagagga actcaaagca
    16381 tgaccgaatt cgtcgtattg attccggcgc ggctggattc gtcgcgcctg cccggaaaag
    16441 ccttggcgga cattcacggc aaaccgatgg tcgtgcgcgt tgccgaacag gcggcaaaaa
    16501 gcaaagccgc gcgcgtcgtc gtcgccaccg atcatcccga cattcagacg gcctgtcagg
    16561 cgcacggtat cgaagtcgtc atgacttcaa accggcacga aagcggcacg acgcgccttg
    16621 ccgaagccgc cgccgcgctg aagctgccgc cgcatttgat tgttgtgaac gtacagggcg
    16681 acgagccgct gattgccccc gaactcatcg accgcaccgc cgaagtactc gtcgaaaaca
    16741 acgtccaaat ggcgaccgcc ggccacgaat tgcacgattt cgacgaattg atgaatccca
    16801 atgccgtcaa agtcgtcctc gacaaaaacg gcaacgccat ctacttcagc cgtgccccga
    16861 ttccctatcc gcgcgatgcg atgcgtgccg gaaaacgcga aatgccgtct gaaaccgccg
    16921 tcctacgcca tatcggcatt tacgcctacc gcgtcggctt cctgcaacgc tatgccgaaa
    16981 tgagcgtctc gccgctggaa accatcgaat cgctggaaca actgcgcgtc ctgtggcacg
    17041 gctaccccat cgccgtcgaa accgccaaag aagcccccgc cgccggtgtg gatacgcagg
    17101 aagatttgga cagggttcgc gctgtatttc agaccgtata aaacaggttc aaagggaaaa
    17161 gatatgcagc aacatattga aaagtggcaa cacttgagcc gtgaagaaca gaaaatcctt
    17221 gccgaagtat ggggtctcgt gcaaaacgat gatcaggagg ttcactatga aatgctcaaa
    17281 ttgaacgcac ctgatgaagt cagcggtgaa ttttggttca gaatggcaga aacactcagc
    17341 accctgccgc ccaatcgttc cctcgacctt agaatgaacg gcggcaggct gtcgaccgcc
    17401 gtatccatcc tttccgtcat gattgaagac aatcccgaca taccgcagct ttgggcgtaa
    17461 aaaattaccg ccctcaatta tttggtacac ggacacaaag cccgtgccga cggtttggta
    17521 caacagcccg acaaagcggc agaagccaac gaagaggaat acctgaccaa agccctgtcg
    17581 caaaacctgc tgtcaacatt ggatgcctca cttgcacgtt ttcctgaaga cgcgtggttt
    17641 caggaaatca aacaggatgc acaaaagcat tttgcttgag gacgtggcgg tcaggaatat
    17701 ttccattcag gaagaaaaga agtgcctaat tgggtataat cagggtaaat cttattttat
    17761 ttcaaaagat taatatttgt tttccgtttt tccttgacgg tatcggaaaa gttgattata
    17821 gttacagctt ccttaggagt aatggctgag aggctgaagg cacttccctg ctaaggaagc
    17881 atgtgggatc aacctgcatc gagggttcga atccctctta ctccgccaga taaaaaaata
    17941 gacgctgtgt tttacagcgt ctattttttt atgcaatttt atagcgggtt ggcgcaaacc
    18001 cggtatggta ttgccctgtc ttgattctga attttgttaa tccgagatgt ttgccgttta
    18061 tttttgcctc gttcaaacgg cggctctgat ctgcgcggtt tctgtttgcc gtattcgcct
    18121 atccgtaccg caaatgttat actgggaaaa attcaccgat tgtattttac ggcgtatttg
    18181 ccgataggat ggaagagaca aatgagcaga atccggcagg cttttgccgc tttggatggc
    18241 ggaaaggcat tgattcccta tattgcggtg ggcgaccccg atattcggac aactttggca
    18301 ttgatgcacg gcatggttgc aagcggtgcg gatattttgg agttgggcgt gccgttttcc
    18361 gatccgatgg cggacgggcc ggttattcag cgtgcggcgg agcgggcgtt ggcaaacggg
    18421 atttcgctgc gcgatgtctt ggatgtcgtc agaaaattcc gtgaaaccga cacgcaaacg
    18481 ccggttgttt tgatgggata tttgaatccc atacataaga tgggttatcg ggagtttgct
    18541 caggaagccg caaaggcggg ggtggacggc gtgttgacgg tggattcccc catcgaaacc
    18601 atcggttctt tatatcgcga gctgaaggat aacgaggtcg actgtatttt cctgattgcg
    18661 ccgacgacga cggaagaccg tattaaaacc attgccgagc tggcaggcgg atttgtctat
    18721 tatgtttcgc tcaagggcgt aacgggcgcg gcaagtttgg atacggatga ggtttcgcgt
    18781 aaaatagagt atttgcgtca gtatatcgat attcccatcg gtgtcggttt cggcatcagc
    18841 aatgcggaaa gcgcgcgcaa aatcggccgg gttgccgacg cgatcattgt cggcagccgg
    18901 attgtgaaag agattgaaaa caatgcgggc aacgaggctg ccgccgtcgg tgctttggtc
    18961 aaagagttaa aggatgccgt gcgctgattc tgtcgcgcat tctaaatgtt ttaggagttg
    19021 tccatgagct ggttagataa aatcctgcca cccaaaatca agaatcgtgg gaaagacggt
    19081 tcttccaatg ttcccgaggg tttgtggcgc aaatgcccgt cttgttcggc aaccgtttat
    19141 tcgaccgagt tgcagcagaa caatcaggtc tgcccgaaat gcaaccacca caatccgtta
    19201 tcggcgcgcc agcgtttgaa cctgcttttg gatgaggaag gcagggagga agttgcgggt
    19261 aatgtcaaac cgaccgatcc tttgaagttt aaagacagca aaaaatatcc ggaccgtttg
    19321 agtgcggcac gcaagctgac cggggaagat gacgcgctgg tggtgatgaa ggggatgatg
    19381 aacggtctgc ccgtcgtcgt tgccgcgttt gaattccgct ttatcggcgg ttcgatgggt
    19441 tcggttgtgg gcgagcgttt cgtacagggt gtccgccgtg cggttgccga taattgtccg
    19501 tttgtctgtg tggcggcttc cggcggcgcg cgtatgcagg agggtgtaaa ctcgctgatg
    19561 cagatgacga aaaccagtgc cgcgctgcat ttgctgacgg aaaaacgcct gccgtttata
    19621 tcggtgttga ccgatccgac tatgggcggc gtatctgcca gcttcgcatt tttaggcgat
    19681 gtcgtgcttg ccgaaccgaa cgcgctgatc ggttttgccg gtccgcgcgt gattgagcag
    19741 acggtgcgcg aaacgctgcc ggaaggcttc caacgcgccg agtttctgct ggaaaaaggc
    19801 gcgatcgacc agattgtcga ccgccgcgat atgaagcggc gcatcagtga tttgattacg
    19861 ctgttgtgcc gtcaggacaa agtttccgcc acctgatggc tgatgaatcg aatgccgtct
    19921 gaaaccgatg tttcagacgg catttttgtg tctggttatt tgtcgtgcgg cttcatcgac
    19981 ggggcatagc gtccggcacg ttctttcagg cgttgtacca aaccttgcgt gtcggcgggt
    20041 acgccgccct cgcagaatgc ctgatacagg acggcgcgca atgcgtcgtt gcgcccaagt
    20101 gtgccgccta tcggtttcca ttcggcgttt cggggctgta tccagcggct gttgaccgta
    20161 tcgccgtatc cgaatacttt gtaggaggaa agtttgccgt tgccgaaccc gatggaggag
    20221 cgggcgcaga atatgccttc ggcagtcagg ttgtcgtagc ctttgtcgga gcggatattg
    20281 agaatgtagc ggatgctgcc gtcgggcgcg ggcataattt gcaggctgtc gagcaggatt
    20341 ttcggctgtt tgccgtaatt ttcatccaca taaatgtcaa accagccgtc cgagtgcgca
    20401 tcgggcagcg gcggcagttc ggcggtatgt tctttaaatt cgcgggcggc ggcttcttcg
    20461 ggcgtttcgc ggtagcgggt gttgatcggc gtgtcttttt ggctgaagcc ggcggcaagg
    20521 gacgtgccga cagtcagggt cagaatcaga aagatggcgc ggcgcataag tttctccaaa
    20581 ttgaaaacgg ctttatttta tggtttggcg ggaagggctg caagcaatcg gggtataatc
    20641 tgacctgatt ttcattttaa agcggtgtcg aaccatgaac agcgaaactt tagacgtaac
    20701 cggattgaaa tgtcccctgc cgattttgcg ggcaaaaaag gttttggcgc aaatgcggca
    20761 gggcgaggta ttgaccgttc tggcgaccga cggcggcgcg ccgggggact ttgaggcttt
    20821 ttgccgccaa accggtcatg tgctgttgga ttcttccgaa caggacggcg tgttcacact
    20881 ggtcgtcaag cacaaataaa tgccgtctga aatgcggatg tcctgattga tgttattgct
    20941 gtcggcattt gtgcttgctg cgtgtaatgc ccaaaaccgg caatccggtg tacggcatca
    21001 ggattttgca cgcgtagccg tcgatttgtt tcggagtgcc tgcgtcctga ctcaaggtag
    21061 tttcgaaccg gtttccaagt ttgccgctgt cggacatttt gtccctgtcg gaaaggaaga
    21121 cctgtcccgt ctgccgcccg ctgttgcaga acccgatgta caggcgttgt ggacgcttga
    21181 acgcgatggc ggcatttatt atttgagcct gacgcgcgac agttgcagtg tgaaagccga
    21241 gcgggcagac agtgccgcgc ttttggaaca tttctcaggg cttgtccgac agccgccgaa
    21301 aaatgccaat
//
LOCUS       DAWXHA010000022        20968 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.022, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000022 DAWXHA010000000
VERSION     DAWXHA010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20968
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.022"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(47..511)
                     /locus_tag="AABD07_000650"
     CDS             complement(47..511)
                     /locus_tag="AABD07_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355231.1"
                     /translation="MKRFILPVLLSATTALASPIVGTWHCIGTDENIHSDTKVKYLQD
                     GSFRGDAILKIDDDGNILAYRVVGEGKWRFANNALTQSQIKYGEVSRQHSPETLAWLE
                     KSEDGRLLESMMYTGLVAQMDKPGKDDVYQLDKSGKLVSEDGTSREACTKVE"
     gene            complement(588..3425)
                     /locus_tag="AABD07_000651"
     CDS             complement(588..3425)
                     /locus_tag="AABD07_000651"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HFB2355232.1"
                     /translation="MLDKYSPAEIESKHYQNWESQGYFRPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVAEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPLADNPTEAVIVATTRP
                     ETLLGDAAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLINVFDLEAKVLANAEVFNFKGEAQPGFSLPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKPHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDNEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEAG
                     NVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGHSFPDMWIIGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPETDGGEIVQTAFGQ
                     MTVLQDLIGAVRNLRGETGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEARQVAAL
                     PESGDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            complement(3530..4789)
                     /locus_tag="AABD07_000652"
     CDS             complement(3530..4789)
                     /locus_tag="AABD07_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HFB2355233.1"
                     /translation="MKVLVLGAGIAGVSSVWYLAEAGHEVTVIDRTEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKRLFKSHPPLLFRPDGGLYQIEWLWRMLQNCTATRYQ
                     INKERMVRISEYSREMFRRFEAQTDMNFEGRKKGTLQIFRQTEEVEAAKQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIVGGLHLPADATGDCRLFTENLYKLCQEKGVRF
                     YFNQTISRIDHNGLRIKAVETETGRFETDAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYETKLPEKRRETLAL
                     VVNDLFPEGGDLSQALSWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSPGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQKL"
     gene            complement(4868..6259)
                     /locus_tag="AABD07_000653"
     CDS             complement(4868..6259)
                     /locus_tag="AABD07_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HFB2355234.1"
                     /translation="MQVFLDNLKAFFETVSSWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKYEGGAGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIVINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPELSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAALYRVGYVSSVMPGTVLSLDLVWLASDTFNGLMALPNLTALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            6458..6604
                     /locus_tag="AABD07_000654"
     CDS             6458..6604
                     /locus_tag="AABD07_000654"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355235.1"
                     /translation="MGMWRAAEIINAADCHTSEIYSGLNLNRYGVASPCRTSCTVCGF
                     VALS"
     gene            complement(6721..7497)
                     /gene="lpxA"
                     /locus_tag="AABD07_000655"
     CDS             complement(6721..7497)
                     /gene="lpxA"
                     /locus_tag="AABD07_000655"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HFB2355236.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVRIGANTEIGPHA
                     VINGHTTIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTVGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFQDFFAQSTRGIIR"
     gene            complement(7540..8226)
                     /locus_tag="AABD07_000656"
     CDS             complement(7540..8226)
                     /locus_tag="AABD07_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="abi-like family protein"
                     /protein_id="HFB2355237.1"
                     /translation="MERYKNAVRKDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CFRQEFKDRNRLYDSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDAAGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINNFRNRLAHHEPICFSFKGAIKDTGYARNIYQSIFELLNYMDVDTASVFSHFSDQV
                     IAVCDEIDKL"
     gene            complement(8433..8882)
                     /gene="fabZ"
                     /locus_tag="AABD07_000657"
     CDS             complement(8433..8882)
                     /gene="fabZ"
                     /locus_tag="AABD07_000657"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HFB2355238.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAVIMCAKRVV"
     gene            complement(8918..9961)
                     /gene="lpxD"
                     /locus_tag="AABD07_000658"
     CDS             complement(8918..9961)
                     /gene="lpxD"
                     /locus_tag="AABD07_000658"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HFB2355239.1"
                     /translation="MIPATCTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAIIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRHVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHIAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDSKDTQ"
     gene            complement(9994..10494)
                     /locus_tag="AABD07_000659"
     CDS             complement(9994..10494)
                     /locus_tag="AABD07_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HFB2355240.1"
                     /translation="MIRLTRAFAATLIGLCCTTGTHADTFQKIGFINTERIYLESKQA
                     RNIQKTLDGEFSARQDELQKLQREGLDLERQLAGGKLKDAKKAQAEEKWRGLVEAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQDVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(10560..12938)
                     /gene="bamA"
                     /locus_tag="AABD07_000660"
     CDS             complement(10560..12938)
                     /gene="bamA"
                     /locus_tag="AABD07_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HFB2355241.1"
                     /translation="MKLKQIASALMMLGISPLAFADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSDRFDRQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTRQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAGTKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDIYGKAFDPRKASTSVKQYKT
                     TTAGGGVRMGIPVTEYDRVNFGLAAEHLTVNTYNKAPKRYADFIKQYGKTDGADGSFK
                     GLLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEVGIAGGYGRTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGRTYTAAENGNNKSVYSENAH
                     KSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(12995..14335)
                     /gene="rseP"
                     /locus_tag="AABD07_000661"
     CDS             complement(12995..14335)
                     /gene="rseP"
                     /locus_tag="AABD07_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HFB2355242.1"
                     /translation="MQTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRSYVGTVEPDTIAARTGFQSGDKIQSVNGVSVQDWSSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTVEWIRGKPLGERVQNIGLRFGLALMMLMMAAAFFNDVTRLIG"
     gene            complement(14370..15554)
                     /locus_tag="AABD07_000662"
     CDS             complement(14370..15554)
                     /locus_tag="AABD07_000662"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HFB2355243.1"
                     /translation="MTPQVLTILGSTGSIGESTLDVVSRHPEKFRVFALAGHKQVEKL
                     AAQCQTFRPEYAVVADAEHAARLEALLKRDGTATQILHGAQALVDVASADEVSGVMCA
                     IVGAAGLPSALAAAQKGKTIYLANKETLVVSGALFMETARANGAAVLPVDSEHNAIFQ
                     VLPRDYTDRLNEHGIDSIILTASGGPFLTTDLSTFDSITPEQAVKHPNWRMGRKISVD
                     SATMANKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRYRDGSVLAQLGNPDMRTP
                     IAYCLGLPERIDSGVGKLDFGALSALTFQKPDFGRFPCLKFAYETINAGGAAPCVLNA
                     ANETAVAAFLDGQIKFTDIAKTVAHCLAQDFSNGMGDIEGLLAQDARTRAQARAFIGT
                     LR"
     gene            complement(15610..16407)
                     /locus_tag="AABD07_000663"
     CDS             complement(15610..16407)
                     /locus_tag="AABD07_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HFB2355244.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALTALWEYA
                     RMAGLCKTETNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLLMPFWFALVSLRPHPDDALPLLAVMGLVWVADVCAYFSGKALGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLPGHGGVFDRTDSLIAVISVYAAIMSVLN"
     gene            complement(16410..17156)
                     /locus_tag="AABD07_000664"
     CDS             complement(16410..17156)
                     /locus_tag="AABD07_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HFB2355245.1"
                     /translation="MKSSTQTILEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDET
                     ALDAAVASFQKRERRFGRTSEQLPIGQQRN"
     gene            complement(17212..17769)
                     /gene="frr"
                     /locus_tag="AABD07_000665"
     CDS             complement(17212..17769)
                     /gene="frr"
                     /locus_tag="AABD07_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019389871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HFB2355246.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYIAEADKVLAAKEEDLMAV"
     gene            complement(17911..18903)
                     /locus_tag="AABD07_000666"
     CDS             complement(17911..18903)
                     /locus_tag="AABD07_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2355247.1"
                     /translation="MKIISLFSGCGGLDLGFEKAGFEIPAANEYDKTIWATFKANHPK
                     THLIEGDIRKIKEEDFPEEIDGIIGGPPCQSWSEAGALRGIDDARGQLFFDYIRILKS
                     KQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFY
                     IGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAPQNKTNPDAVNNNEYF
                     TGSFSPIFMSRNRVKAWDEQGFTVQASGRQCQLHPQAPKMEKHGANDYRFAAGKETLY
                     RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTLER"
     gene            complement(18908..19744)
                     /locus_tag="AABD07_000667"
     CDS             complement(18908..19744)
                     /locus_tag="AABD07_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoPII family restriction endonuclease"
                     /protein_id="HFB2355248.1"
                     /translation="MNIIDAIINLANNPVVGVESHSQSNNRANQAGDALEEYVKDLFS
                     GSFNLNETQRIARHAKVFSYLGNNSNPPDAMLRNGDAIEVKKIESKDSALALNSSHPK
                     SKLSVDDSMLTKACKDAEKWEEKDIIYIVGVVDKKKNLKHLAMVYGIDYCADAECYLK
                     IKNQIKEGIGNIGGIQFAETKELGRVNRIDPLNITYLRVRGMWGIENPWFVFNYIYQR
                     NMEKSFNFMAIINEDKWNSFNNTDKLLAIQDSKLAISDIKIKNPNNPARLRNAKLITY
                     HL"
     gene            complement(19853..>20968)
                     /locus_tag="AABD07_000668"
     CDS             complement(19853..>20968)
                     /locus_tag="AABD07_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HFB2355249.1"
                     /translation="QRKRLSGRWLNSYERYRHRRLIHAVRLGGAVLFATALARLLHLQ
                     HGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGNLLFY
                     LTIGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIGAAIA
                     IAAAKLLPLKSTLMWRFMLADNLADCSKMIAEISNGRRMTRERLEQNMVKMRQINARM
                     VKSRSHLAATSGESRISPSMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSEIRLL
                     DRHFTLLQTDLQQTAALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLSTNMR
                     QEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
BASE COUNT         4246 a         5315 c         6011 g         5396 t
ORIGIN      
        1 gagttttggt atttttgccc gacggggtgg aaaatacagt tgcttttcac tccactttcg
       61 tacatgcctc acgggaagtt ccgtcttcgg acactaattt gcctgattta tccagttgat
      121 acacatcatc ttttccgggt ttgtccatct gcgcgaccaa tccggtgtac atcatgcttt
      181 ccaagagtcg tccatcctcc gacttttcta accacgccag cgtttcgggg ctgtgctgtc
      241 gtgaaacttc accgtacttg atttggcttt gagttaaggc attgttcgca aaacgccatt
      301 taccttcacc gacaacacgg tatgccaaga tattgccgtc atcatcgatt ttgagtatag
      361 catcgccacg gaagctgccg tcctgaagat atttgacttt tgtatcactg tgaatgtttt
      421 catcagtgcc gatgcaatgc catgtaccga caatcggaga agccaaggcg gttgttgcgg
      481 ataaaagcac cggcagaata aagcgtttca tctatttcct tttttaaagg aggccgtctg
      541 aaaaccccgg tttcaggttt tcagacggcc ttgtctattc aatcaaatca gtctttcaac
      601 ttcgccaact gattttgcac ttttgccatt ttgtcttcca attccgccaa atcggctttg
      661 tctttttcca ccagatgcgc cggggctttt tcggtgtagc cgggtttgga gagtttggca
      721 ttgagtttgt ccaaggcttt ttgcagcttc tcggcttctt tgctcaaacg ggcggtttcg
      781 gcggctttgt cgatttcgac tttcagcatc aggcgcgcgc cgttgcagac ggcgacgggc
      841 gcgtctccgc tttcgggcag ggcggcgact tgccgtgctt cggtcaggcg ggtcatcatc
      901 ggcaggtatt tgaggtagtc cgccaagtcg tccgcgcttt cgacaaacag cggggctttc
      961 acgttgggct ggatgcccgt ttcgccgcgc aggttgcgga ctgcgccgat caaatcctgc
     1021 aacacggtca tttgcccgaa tgccgtctga acaatctcgc cgccgtcggt ttcggggaag
     1081 cgggcgagca tgatgctgtc ggcggttttg gcatcgcaca tgggggcgac ggtttgccac
     1141 agttcttcgg tgatgaacgg gataatcggg tgcagcaggc gcagggcggc ttcgagtacg
     1201 cgcaataagg tatggcgtgt ggcgcgctgg cggctggcgc agccggtttg gagctgcact
     1261 ttggcgagtt ccagatacca gtcgcaataa tcgttccata cgaagctgta cagggtttcc
     1321 gccgccaaat caaagcggta ggtttcgtag gcttgcgtaa cctgctcgat ggtctgattc
     1381 agacgaccta tgatccacat atcggggaag gaatggccgc gcggttcggc agcggttgcg
     1441 ccgtagccgc agtcttggtt ttcggtgttc atcaagacga agttggtggc gttccagatt
     1501 ttgttgcaga agttgcggta gccttcggcg cgtttgaagt cgaagttaac cgaacggccc
     1561 aagctggcgt agctcgccat ggtgaagcgc aatgcgtccg cgcccatgct ggggatacct
     1621 tcggggaaga gttttttcgt ggcttcttcc actttcggcg cggtttcggg tttgcgcagg
     1681 ccggtcgtac gtttcatcag cagcttgtcc aagccgatac catcgatcaa atccacaggg
     1741 tcgatgacgt tgccttcgga tttggacatt tttttgcctt cgtggtcgcg cacgatgccg
     1801 tggatgtaca cggctttaaa cggtactttg ccggtgaagt gggtggtcat cataatcatg
     1861 cgcgccaccc agaagaagat gatttcatat ccggtaacta agacgttgga cggcaggaag
     1921 gctttgagct cgtcggtttc agacggccag ccgagcgtgg agaacggcac gagcgcggag
     1981 gagaaccatg tgtccaatac gtcttcttcg cgggtcaaac ctgttttgcc ggcttgtttt
     2041 tcggcttcag cctgattgcg ggcgacgtaa acattacctg cttcgtcgta ccacgcgggg
     2101 atttgatgcc cccaccacag ttggcgcgaa atacaccagt cttggatgtt gttcatccat
     2161 tggttgtagg tattgaccca gttttcaggg ataaagcgca ctgcgccgct gtcgacggct
     2221 tttttggctt tgtcggcaag gctcaagcct ttgaattcgt tgtcaggctc gccgccgttc
     2281 ggtgtggcgg acatggcgac aaaccattgg ctggtcagca tcggctcaat cactgaacct
     2341 gtgcggtcgc ctttcggcgt catcagcgtg tgcggtttga tttcgaccaa gaagccttgc
     2401 tcctgcaaat cggcaaccat ttgtttgcgc gcggcaaagc ggtccaagcc tgcgtatttt
     2461 tcaggcaggg aaaagcctgg ttgcgcttcg cctttgaagt tgaacacttc ggcgtttgcc
     2521 agcactttgg cttctaagtc gaacacgtta atcaggcgcg tgtcgtggcg tttgccgact
     2581 tcgtaatcgt tgaaatcgtg cgcaggcgtg attttcacgc aaccggtacc gaagtctttt
     2641 tcaacgtatt cgtcggcgat aaccggaatg gtgcgaccgg tcagcggcag gattaattct
     2701 ttgccgatta agtgggtgta acgttcatct tctggattga cggcaacggc cgcgtcgccc
     2761 agcaacgttt caggacgggt ggtcgccacg ataacggctt cggtgggatt gtcggccagc
     2821 ggatagcgga tgtgccacat agagccttgt tcttccatgc tttccacttc caaatccgac
     2881 accgccgtgc caagcacggg atcccagttc accaagcgtt tgccgcggta aatcaagccc
     2941 tgttcataca ggcgcacgaa cacttcggcc acggtttcgg cgcgtacgtc gtccatcgtg
     3001 aaatactcgc gcgtccagtc ggcggagcag cccacgcggc gcatttgctg ggtaatcgtg
     3061 ccgccggaaa cttctttcca ctcccacact ttttccaaga atttttcgcg ccccaagtcg
     3121 tgacgggaca cgttttgcgc ggcaagctga cgctcgacca cgatttgcgt ggcgatgccc
     3181 gcgtggtcgg taccgggaat ccaggcggtg ttgcagcctt tcatgcggta gtagcgggtc
     3241 aggccgtcca tgatggtttg gttgaaggca tgacccatgt gcagcgtgcc ggttacgttg
     3301 ggcggcggca gttggatgga aaaagacggt ttggtcaaat ccatatcggg ccggaaatag
     3361 ccttggcttt cccagttttg atagtgtttg gattcgattt cggcggggga gtatttgtct
     3421 aacatatgaa gccctgagaa ataagatgat ttgatggttt gaattatagc gcaaatgccg
     3481 tctgaaacgc tttcggggtt tcagacggcc ttaaatttaa atattgcctt tacagttttt
     3541 gatagcgcga caggctcaaa tcgtcgctgc ggatttcggt gtctttgccg ctcacgatat
     3601 cggcggtcaa ttttgccgaa cccggcgaca tggtccagcc caaagtaccg tgcccggtat
     3661 tcagaaacag gttttcaaag cgggtgcgcc cgattaacgg cgtactgtcg ggcgtcatcg
     3721 gcctgaggcc gctccaggac aatgcttggc tcaaatcgcc gccttccggg aacaagtcgt
     3781 tgacgaccaa agccaaggtt tcgcggcgtt tttcgggcag tttggtttcg tagccggaca
     3841 attccgccat tccgccgacg cggattctgt tgtcaaaacg cgtgatggcg actttgtagc
     3901 tttcatctaa aacagtggac accggtgcgc cgtcggaatt tgtgaccggc agggtcaagg
     3961 aatagccttt gacgggataa atgggcagat tgagatccaa ctgcgccaac acagtcctgc
     4021 tgaagcagcc gagcgcgcag acaacggcat ctgtttcaaa ccgccctgtt tcggtttcaa
     4081 cggctttgat gcgcagcccg ttgtggtcga tgcggctgat ggtttggttg aagtagaacc
     4141 gtacgccctt ctcttgacac aatttgtaca ggttttcggt aaagaggcgg cagtcgccgg
     4201 tcgcatccgc aggcaggtgc agaccgccga caattttggc ggtaacgcgt gccagcgcag
     4261 gctcgaattc tgcgcattct tcgggcttca gacggcggta cggcacgccg tagcgttcca
     4321 aaacggcaat gtcttgtttt gccgcttcga cttcttcggt ttggcggaaa atctgcaacg
     4381 tccctttttt gcgtccctca aaattcatgt cggtttgcgc ttcaaaacgg cggaacattt
     4441 cacggctgta ttcggaaatc ctgaccatgc gctctttatt gatttgatag cgcgttgccg
     4501 tgcagttttg cagcatccgc cacagccatt cgatttgata caggccgccg tcagggcgga
     4561 acagtaaagg cggatggctt ttaaacagcc gtttcagtgc tttggtcgga ataccgggtg
     4621 cagcccaagg cgtggtatag ccgtaagaaa gctggcctgc attggcaaaa ctggtttcca
     4681 tcgccacacc ctcggtgcgg tcgatgaccg ttacttcatg tccggcctct gccagatacc
     4741 acacggagga tacgccggca atacccgcac ctaaaacaag cactttcatg tttccccctc
     4801 cggctttttc aaaacaggct taatatgccg tgccgtctga atattcggat tcagacggtc
     4861 tcggatatta atgcggcaat tcgccgtttg tgattttttg tttgaagtcg cgtgtttcat
     4921 tgacgatgac tttcgccatc aacaaaagcg cagtcaggtt gggcaatgcc atcaagccgt
     4981 tgaatgtatc cgaagccagc cataccaaat caaggctcaa cacggtaccc ggcatgacgg
     5041 aagaaacata accgacgcgg tacaaagcgg caaacttctc gccgaagacg taaaccgcgc
     5101 atttctcgcc gtaataacac cagccgagaa tggttgagta ggcaaagaaa atcaggccga
     5161 tggtcacaat ccagccgccg atgccgggca gcattttttg gaaagtgacg gttgtcagcg
     5221 ccgcgccgct caattcaggt ttcacaaact cgccgcctgc gccgagcaga cccatgacca
     5281 acacgatacc ggtaatcgag cagacaacaa tggtgtccaa aaaagtaccg gtcatggaaa
     5341 ccaaagcctg acgaacgggg tggtcggttt tcgcggctgc ggcggcaata ggcgcagaac
     5401 ccatacccgc ctcattggag aacacgccgc gcgccacgcc gtagcggatg accgtaccga
     5461 tagcgccgcc tgctacggcc tgcgcgctga acgcatcgga gaaaatcagc ttgacggcag
     5521 gcatcagtgc atcggaatta atgacgataa tggaaagacc gcccaacaca taaaacaccg
     5581 ccatagcagg cacgatgaaa gaagcggctt tggcgatgcc tttaatacca cctaaaacga
     5641 caacggcagt cagaacggtc aacgtaatgc cggtataggc aggttcgata ccgaagctgg
     5701 tttgcacagc ctgtgcaacc gagttggact gcaccgagct gccgataccg aaggaagcga
     5761 atgtgccgaa cagcgcaaat gcaacggcca tccatttcca gtttttgccc aagccttttt
     5821 cgatgtaata catcgggccg ccggacattt cgcctttgga attgttgacg cggtatttca
     5881 ccgccaacac gccttcgccg tatttggtgg ccatgccgaa aatagcggtc atccacatcc
     5941 aaaataccgc gcccgggccg ccggttacca ctgcagtcgc cacgccggcg atgttacccg
     6001 taccgatggt ggcggacagc gcggtcatca acgccgcaaa atgggaaata tcgccttcgt
     6061 ggcctgcgcc gccttcatac ttctttgacg gcacaaacgc ctgtttcagc gcatagccca
     6121 acatagtgaa ctgcaagcct ttcagcataa cggtcagcac aatgccggtg ccgaccagca
     6181 gcatcaacat aacagatccc caaacccagc tgctgacggt ttcgaaaaag gctttgagat
     6241 tgtctaaaaa tacttgcatg gctttctcct ttgtctgttt tatttttaaa acaccacttt
     6301 gtagtgtccg gtaatttcag cacagaatat tcaataagac aatatgttct tttgaaaaat
     6361 acttttggtt ttttcaccga agacaggccg gttcaagctg cggaaattgt ttgcaattat
     6421 ttaaaagcag aggcggaggt cacaatgaaa tgtccgaatg gggatgtggc gggcggcaga
     6481 aatcatcaat gctgccgact gccatacttc tgaaatctat agtggtttaa atttaaaccg
     6541 gtacggcgtt gcctcgcctt gccgtacttc ttgtactgtc tgcggcttcg tcgccttgtc
     6601 ctgatttaaa tttaaaccac tatacaaaat gatgcatcga tcaaacaaca taccgcttta
     6661 aaaaaaaccg atgccatctg aaacgctttc ggggtttcag acggcattga aagggtgcgg
     6721 tcagcggatg atgccgcgcg tcgattgtgc gaagaagtct tgaaatacgg caagctcggc
     6781 ttgggtttcg gcgcggcgga gaatgtccgc cttggcttct tcaaacggaa tgccgcgatg
     6841 gtagagggtt ttgtatacgt ctttgacggc ggaaatctgt tctgcggtaa aaccgttgcg
     6901 gcgcatacct tcgctgttta ggccggccgg ttcggcgcgg tagcccgatg ccataaagta
     6961 gggcggcacg tctttgtgta cgcctgcggc gaaggcggtc atggcgtagt cgccgatgcg
     7021 gcagaattgg aagaccagcg tgtagccgcc caaaacgacg tagtcgccga cggtaacgtg
     7081 tccggcaagc gaggcgttgt tggcgaaaat ggtgtggttg ccgaccacgc agtcgtgcgc
     7141 gaggtggcag tacgccataa tccagttgtc gtcgccgata cgggtttcgc cgatgccggt
     7201 taccgtgcct aaattaaagg tggtgaattc gcggatggtg ttgccgttgc cgataatcag
     7261 cttggtcggc tcgtcgcggt attttttgtc ctgcggaatt tcgccgaggc tggcaaattg
     7321 gaaaatgcgg ttgttttcgc cgatggtggt gtgaccgttg atgacggcgt gcggaccgat
     7381 ttctgtattc gcaccgattc ggacgttggg gccgatgacg gtgtacgcgc cgactttgac
     7441 gccggagtcg agttcggctt tggggtcgat gacggcggtc gggtggatga gggtcatgtt
     7501 ttgaatactc cgctgcttgt taagacaaat aatagaaaat cacagtttgt cgatttcatc
     7561 gcagaccgca atcacttgat cgctaaaatg gctaaatact gaagcagtat ctacatccat
     7621 gtaattaagc agttcaaaaa tagattggta aatatttcta gcgtagccgg tatcttttat
     7681 tgcaccttta aaactaaaac aaatcggttc gtgatgtgcc aaacgattac ggaaattgtt
     7741 aatattggaa agttctcgaa aaatccattt ttggttatat tgcacacttg gtgtagattt
     7801 gggctttttt ggaaaaactt tcatcaatac ttttcctgca gcatcaaatt gagcatcttt
     7861 ccctcccgca aacagatacc gccaaaaacc gaatcctagt cctgcaacca attggttgtg
     7921 gtcaaacttt cctccgctat tattttgtat tttagataat gcaaccttga ttaattcagc
     7981 agattctttc gtaccatttc ttaaaaagca accttgatat ttcaatgcag gattcgtttg
     8041 tggttgtatg ctatcatata accggtttct gtctttaaac tcctgccgaa agcaaatatc
     8101 aattttgttt cttaaaacga tctcaaatat agaaacaaca tgaaaaagtt ctcttgataa
     8161 agataaattc aataaataca attcagctgc tttgtctttc ctaacggcat ttttataccg
     8221 ttccattctg aaatcagaaa aaatactaca gcattcctta taattcacgc taacccttga
     8281 ttctttattt ttaaattgac gtttcaaact atatttgata tagttagata aaactaatcc
     8341 ccaccgtgtc cctgggtttg aataaaccta aaccggtggg ttttcttttt attaggtcgt
     8401 ctgaaacttt cagacgacct ttttccgaac gctcaaacca cgcgtttggc gcacataatc
     8461 acggcttcga cggcgacttg tccgtccact ttggcaacgg cgttgaattt gccgatgccg
     8521 cgccggctgg tcaggagttc gacttcaaag acgagttggt cgccggggat gacttggcgt
     8581 ttgaaacggg cttcgtctat gccggcgaag aagaaaaatt cgttttcctt gcgcccgcct
     8641 tcgctcaaaa tcgccaacgt gccgcacgcc tgcgccatcg cttcgatgat gagtacgccg
     8701 ggcataacgg gcaggtcggg gaaatggcct tggaattggg gttcgtttat ggttacgttt
     8761 ttgatggcgg tcagggtttt catcggctcg aaggcggtga tgcggtcgag ctggagaaac
     8821 gggtagcggt gggggatgag tttttggatg tctttggctt cgatggggag ttgtacgtcc
     8881 atgtctgtcg tattccttga ataaagtcgg tttggattta ttgcgtgtct ttgctgtctg
     8941 aaagctgctg ttccagcgtt ttgaggcgtt tgttcatttc gcttaagcgg tggatgtaaa
     9001 cggcgttgcg cgcccattct ttatgggtgg acatcgggaa gatgccggcg atgtgtttgc
     9061 cgctttcggt aatgctgtgg gtaacggacg tgccgccgcc gatggtggtt ttgtcggcga
     9121 tttcgatgtg tccgaccgta ccgacgccgc cgccgatgat gcagtagctg cctatggtta
     9181 cgctgcctga gatgccggtt ttggcggcga tgacggtgtg cgaaccgatt ttgcagttgt
     9241 gtccgatttg gacttggttg tcgattttgg tgccgttgcc gacggtggtg tcgctcatcg
     9301 cgccgcggtc gatgttggtg ttcgagccga tttctacgtc gtcgcccagc gttaccgcgc
     9361 cggtttgcgg gattttgaac cacgaatcgc cggcgaaggc gagtccgaaa ccgtccgcgc
     9421 cgatgaccgc gccgctgtgg atttcgacgt gtctgccgag tgtgcagccg taataaacga
     9481 cggcgttggg atgcaggacg acttcgtcgc ccagtttgca atcgtgttgg acgacggcgt
     9541 ttgccaagat gcggcagcct tcgccgagca cggtgttcgc gccgatgtag gcgttcgcgc
     9601 cgatttcaca gcttgcggga acggtcgcgc ccggttcgac gacggcggtc ggatggatgc
     9661 cgccgcgcgc tttgacgacg ggtgaaaaca ggcgcgcgac tttggcgaaa tagagatagg
     9721 gatcgtcggc gacaatcagg ttgcgccctt caaatccgtc tgctgctttg gcggaaacga
     9781 tgatcgcgcc cgcgctgctg tcgtggactt cggctttgta tttcggattg gcgaggaagc
     9841 tgatgtgttc cgcctgcgcg tctgcgagcg ggcgcacggc ggtaacggaa atgtcctcgc
     9901 cgcgccattc gccgccgagc cgcgcggtga tttgggacag ggtgcaggtg gccggaatca
     9961 tggttttcct gtttggtatg ccgtctgaaa gggttagcgg gcgttcattt ctttaatgac
    10021 gctgtcggta acgtcgtatt gggtgttgac gtaaatcacg tcctgcaaaa tgacatcgta
    10081 accttcctgt ttggcgattt tgacgatgac gcggttggcg ttttgctgga gggaggcaaa
    10141 ctcttcgttg cggcggaggt tgtagtcttc ttcaaactgc gcctgttttt tgcggaacgc
    10201 ttcgaccagc ccgcgccatt tttcttcggc ttgcgccttt tttgcgtcct taagtttgcc
    10261 gccggcgagc tgcctttcca aatccaagcc ttcgcgttgc agtttttgca attcgtcctg
    10321 acgggcggaa aattcgccgt ccagcgtttt ttggatgttg cgcgcctgct tggattcgag
    10381 gtagatgcgc tcggtgttga taaagccgat tttttggaag gtgtcggcgt gcgtgcctgt
    10441 ggtgcagcat aaaccgatca gggtggcggc aaacgcgcgg gtcaaacgga tcatggtaaa
    10501 actccttcgg atgttgccgc gaaatgccgt ctgaagggct tcagacggca tttgcgggat
    10561 tagaacgtcg tgccgagctg gaattggaag cgttggattt cgtcttccgg ttttttcttc
    10621 agcgggtagg cgtagctgaa tttcatcggg cccaaaggcg agagccaggt aaccgcgccg
    10681 ccggcggaat agcgcaattc gttggtaaag gtggatttat gcgcgttttc cgagtaaacc
    10741 gatttgttgt taccgttttc ggcggcggta taggttctgc cgtcccacac gctgcctgcg
    10801 tcggcaaaca ggctcaggcg gacggtgcgt gcgtctttcg ccccgggcat cgggaagagc
    10861 agctcggcgg agacgttggc ttttttgttg ccgccgtagc tgattttttc gccgtattcg
    10921 tcatacactt tcgggccgag cgtgccgctt tcgtagccgc gcaccgaacc caggccgccg
    10981 ccgtagaagt tttcaaagaa ggggatttct ttggttctgc cgtagccgcc cgcaatgccg
    11041 acttcgccgc cgagcatcag cgtgaaggtt ttgcttaagg ggaagaacca ggtttggttg
    11101 tgggtggcgg agtagtattg cagtttgctg ccgggcaggg cgatttcggc atttacgccg
    11161 gtcaggtagc cgcgcgtcgg ccataaggcg ctgtcggtct tgttgcgccc ccagccgaca
    11221 gtgcctttgt acagcaggcc tttgaagctg ccgtctgcgc cgtcggtttt gccgtattgt
    11281 ttgataaagt cggcatagcg tttgggtgct ttgttgtagg tgttgacggt caggtgttcc
    11341 gccgccagcc cgaaattgac gcggtcgtat tcggtaacgg ggatacccat ccttacgccg
    11401 ccgccggcgg tggtggtttt atattgtttg acgctggtcg atgctttgcg cgggtcgaag
    11461 gcttttccgt aaatatcgta gcccaggctg accccgtctg ccgtgaagta cgggtcggta
    11521 aacgacagcg agccgttgag cgtggttttg cttcgcgagg cgcgcagggc ggccgacttg
    11581 cccgtaccga acaggttgtc ctgcgatacg ccggcggaca tgaccaagcc ggtatcctga
    11641 acccagcccg cgctcaagtc gagcgagccg gtggagcgtt cggtcaggct catgttcaaa
    11701 tcgactttgt cgggcgtacc ggcaagcggg acggcatcaa actgtacgtt gtcgaagtag
    11761 cccaaaagct cgacgcgctc tttggagcgt tgcagcttgg aggtgtcgta aggcgcggat
    11821 tccatttggc gcaattcgcg gcgcacgact tcgtcgcggg ttttgttgtt gccggtgatg
    11881 tggatttcgt tgacgtagat ttttctgccc ggttcgatgt gcaggacgaa atcgacggtt
    11941 ttggttccgg cgttcggcag cggctgtacg ctgatttcgc tgtatgcgta gcctgccgag
    12001 cccatgcggt tctgaatctc acccaaaacg gcggtcatct gctggcgttc gtaccatttg
    12061 ccgggcttca tggtcagcag tttttccagt tcggccttgg ggacttcgtt ggtgtcgcct
    12121 tcaatcgaca ctttgcccca gcggaaacgt ccgccttcgt ggacggtgat tttgatggtc
    12181 tgcctggttt tgtcttcgtt ggtttggatg tcggtatcga ggatacggaa atcgaagtag
    12241 ccgttgttct ggtagaagtc ggttactttt tccatgtctt gggcgaattt ctggcggtcg
    12301 aaccggtcgc ttcgtgtcag ccatgtccaa atgccgcctt cggtcagcga catctgccgc
    12361 atcagtttgc ggtcggaata gacttggttg ccttcaaatt cgatgtcggt gattttggcg
    12421 gatttgccct cgtcaatcgt gatgtcgatg tcgacgcggt tgcgggcgag tttggttact
    12481 ttgggcgtga tttggatatt gagtttgccg cgcccgaggt attcttcttt caggccggcg
    12541 actgcctggt tgagtgtcgc ctgattaaag tattgcgact gcgccagccc gaacgattcg
    12601 aggtttttct tgatggcgtc gttttgcagc attttggcgc cggtgatgtt gagcgagccg
    12661 atggtggggc gttcgataac ggtcagcaga agctgcccgt ccgcagtttc gactcgtacg
    12721 tcgtcaaaga aaccggtggc gtacaggctt ttgatgatgg cactgccgtg tgtgtcgttg
    12781 taggtgtcgc cgactttgac gggcaggtag ttgaatacgg tgctcggctc ggtacgctgc
    12841 aagccttcga cacggatgtc ttggatggtg aagtcggcaa atgccaaagg cgatatgccc
    12901 aacatcatca gtgcggaggc aatctgtttc agtttcatcg taagttcctt gtggtgcgga
    12961 atgcggtttc agactgcatt ccgaaacgta aaatctaacc gatcagccgg gtaacgtcgt
    13021 tgaagaaggc ggccgccatc atcagcatca tcagggcgag cccgaagcgc aaaccgatgt
    13081 tttggacacg ttcgcccaaa ggtttgccgc gtatccattc gacagtataa aacacgaggt
    13141 gcccgccgtc caaaacgggg acgggcagca ggttcagcac gccgaggctg atgctgacca
    13201 acgctaaaaa ttccaaataa ctttgcaagc cgagttcggc ggactgtccg gcaatgtcgg
    13261 caatggtcag cggcccggaa atatggctga cagaggcgtt gccgctgatt agtttgccga
    13321 aaaatttgag ggttgtccac gagtgggaaa cggttttttc ccagcccatg ccgaatgcgc
    13381 ggacaacaga cggacggtag ctgcggcgga tttgcgcgtc ccacgccctg tccggctgcg
    13441 gacggaggcc gacgcgcccg atcagggtgt ggtcgggctg ttcgacagta tcggggcgga
    13501 tgtcggcggt atgggtttgt ccggcgcgtt cgtaggtcag ggtgattttt ttgcccgggc
    13561 tttggcgggt caggtttgcc cattcctgcc atgaggcgat gggtttgccg tcggcggcag
    13621 tcagcctgtc gcccggtttc aggcctgctt tttcggcggg gctgcctttt tccacgccgc
    13681 cggcaacggt tgtgatttta aagggcatca gtccgatgta gccttggttt tttgcgattt
    13741 taccggcttc cggcgtgcct gcggcatcga tggtgcggac ggtttgcgcg cccgatgccg
    13801 tctgaacgcc gacggcgact ttgccggctt cgaggttgag gacgatttcg gtttgcgcgc
    13861 tgctccagtc ttggacggaa acgccgttga cggattgtat tttgtcgccg ctttggaagc
    13921 cggtgcgggc ggcaatggtg tcgggttcga ctgtgccgac ataggaccgc agttcggtta
    13981 cgccgaagga aaagctcagt ccgtacagca aaaccgccag tgcgaggttg gtcagcggac
    14041 cggcggcgac gatggcgatg cgcttggcgg ggtgttgttt gtcaaaagcg tagggtaaat
    14101 cggcttctga tacttcgcct tcgcgcgtat cgaccatttt gacgtagccg cccaacggaa
    14161 tcggggcgag gcaccattcg gtgtcgccgc gctttcgggt gaaaaacggt ttgccgaagc
    14221 cgacggaaaa acgcacaacc ttgacgccgc acaacctggc gacgatgtag tgtccgaatt
    14281 cgtgcaggct gaccaaaatc aggatggcga agataaaagc tagaagggtt tgcaaatggt
    14341 tttcctttga taacggtgtt cggacggtat cagcgcagtg tgccgataaa tgcccgcgct
    14401 tgtgcgcgtg tccgggcatc ttgcgccaac agtccttcta tatcgcccat gccgtttgaa
    14461 aagtcttgtg caagacagtg ggcgacggtt ttggcaatgt cggtaaactt aatctgtccg
    14521 tccaaaaagg cggcgacggc ggtttcgttg gcggcgttca atacgcaggg cgcggctccg
    14581 cctgcgttta tggtttcata ggcgaacttc aggcagggga agcggccgaa gtcgggcttt
    14641 tggaaggtca gcgcggacaa tgcgccgaaa tcgagtttgc cgacacccga atcgatgcgc
    14701 tcgggcaagc ccaaacaata ggcgatgggc gttcgcatat cgggattgcc cagttgcgcc
    14761 agcacggagc cgtcgcggta gcgcaccata ctgtgtatca cggattgggg atggatgacg
    14821 acttcgagtt tgtcgggcgg acagttgaac agccaatgcg cttcaatcag ttccaagccc
    14881 ttgtttgcca tagtggctga atcgacggag attttgcgcc ccatacgcca attggggtgt
    14941 ttgaccgcct gctcgggcgt aatgctgtcg aacgtgctta aatcggttgt taaaaacggg
    15001 ccgccggaag cggtcaggat aatcgaatcg atgccgtgtt cgttcagacg gtctgtgtaa
    15061 tcgcgcggca aaacttggaa aatggcgttg tgttcgctgt cgacgggcaa cactgccgcg
    15121 ccgtttgcgc gggcggtttc cataaacaac gcgccggaaa ccaccagcgt ttctttgttt
    15181 gccagataaa tggttttgcc tttttgcgcc gctgcgagcg cggaaggcag ccccgccgcc
    15241 ccgacgatgg cgcacatgac gccgctgact tcgtcggcag acgcaacgtc aaccaatgcc
    15301 tgcgcgccgt gtaaaatctg agtcgccgtg ccgtcgcgtt tcaacagggc ttcaagccgg
    15361 gcggcgtgtt cggcatcggc aacgacggca tattcggggc ggaacgtttg acattgagcc
    15421 gccagtttct cgacctgctt atgccctgcc agcgcgaata cgcggaattt ttcgggatgg
    15481 cgggagacaa cgtccagcgt gctttcgcct atgctgccgg tactgcctaa tatggtcagg
    15541 acttgtggtg tcataatgag gataacttta taccggatgc cgtctgaagc gttttcagac
    15601 ggcatagaat caatttaaaa ccgacattat cgccgcatag acgctgataa cggcaatcag
    15661 gctgtcggta cggtcgaaca cgccgccgtg tccgggcagc aggttgctgc tgtctttgat
    15721 gcctgccgcg cgcttgagcc agctttccaa caggtcgccg catacgctga caacggtcaa
    15781 caccaaaccg attaacacgg tatcgaacca gcctgtatcg aatgccagcc agccggcact
    15841 tcgtacggca gtcatgtaca ctgccacgca aaccgcaccg ccgattgcgc cttcccagct
    15901 cttgccgggg ctgattgccg gtgcgatttt gtgtttgccg agcgccttgc cgctgaaata
    15961 cgcgcaaacg tcggcaaccc agaccaaacc catcacggcg agcagcggca gggcatcatc
    16021 gggatgcggg cgcagggata cgagcgcgaa ccaaaacggc atgagcaaaa gccagccgac
    16081 ggcataaacc tgccaaccgc cgttgagcct ccatttgaat ctcaaccaca aaggcataac
    16141 ggcgagccaa aatgccaaaa caacatacca aaccaaatta ggcagcatcc agccgcccgc
    16201 ataggcaact acgccgaaaa ccaaggttgc ggcgaggtaa tggttggttt cggttttgca
    16261 caaaccggcc atacgggcat actcccacaa ggcggtcagg gcaatcagcc cgcaaaatgc
    16321 agcccacagc cattgcggcg cgtaaaacag catgcccagc atcagcggca gcagccacat
    16381 agcggttatt acccgttgtt tcagcatatt cagttccttt gctgtccgat aggcagttgc
    16441 tcggaagtgc gtccgaaccg ccgttcgcgt ttttggaacg aagcgacggc ggcatctaag
    16501 gcggtttcgt cgaaatcggg ccacaggatg tcggtgaaat acagttctgc atacgccatc
    16561 tgccagagca ggaaattgct gatgcgcgtt tctccgcccg tgcggatgaa caaatccggt
    16621 tccggcgcgt cgcccagcat caagtgtttg gccagcgtgt cttccgtaat ctcggatacg
    16681 ccttcggcaa tcagtttgtt tgccgcctgc aaaatatccc agcggccgcc gtaatccgca
    16741 gcaatgctca gggtcagacc ggtattattt gccgtcaagg cttccgcctc ttcgatacct
    16801 tgcagaatct gccgattaaa gcgttcgcgg ctgcccaata ttttcaggcg catattgttt
    16861 tcgtgcaggc ggcgtacctg tttttgcaaa gcctgtaaaa acagccccat caggaacgaa
    16921 acttcgtctt cggggcgacg ccagttttcg gttgaaaagg caaacacggt cagatattgc
    16981 acgcccagtt tggcgcaatg cttcaccata ttttccaacg cgtccaagcc gcgtttgtgt
    17041 cccattatac gcgggagaaa acgttttttc gcccaacggc cgttgccgtc cataattacg
    17101 gcgatgtgcc tcgggatggc ggtgtgttcc aaaatggtct gcgtgctgct cttcatatct
    17161 gcctttcgcg gttcggcgtt caaatgccgt ctgaacgccg cgccgtgaga tttaaaccgc
    17221 catcaggtct tcttctttgg cagccaaaac cttatcggct tcggcaatgt acttgtcggt
    17281 cagtttttga accgcctctt cgccgcgacg tgcctcgtct tcggaaattt ctttgtcttt
    17341 gaggagtttt ttgatgtggt cgttggcatc gcggcgcacg ttgcggatag agacgcgtcc
    17401 ttcttccgcc tcgccgcgca cgactttaat caggtctttg cggcgttcct cggtcagcat
    17461 gggcatcggc acgcggatca aatcgccgac agctgccggg ttcagtccca agtttgaatc
    17521 gcggatggct ttctcgactt tggccgccat attgccctca aacggtttca cgccgatggt
    17581 gcgcgcgtcc aaaagggtta cgttggcaac ctggctgacg gggaccatgc tgccccagta
    17641 ttcgacttcc acttggtcga gcaggccggt atgcgcgcgg ccggtacgca ctttcgccag
    17701 attttctttc agtacttcga ccgaacgctg catcttgcct tcggctgttt tttgaatatc
    17761 gttgatcata ttgttctttc ggtaagataa ggtaggcggg cagccgttcg aacgcgctcc
    17821 aagccgttca gacggcataa agaccgttaa ctgcgaatag taccgttatt cgggcatgac
    17881 gacaaggcag atgcctgtag gaagggtgtt tcacctttct agggtttttt taattgccgc
    17941 tgcaatttcg taggcaaggt tgacggggac ggcgttgcca atcattttgt atgcgtcgtt
    18001 gacattttga tagatgaatt tgaagttgtc gggaaagcct tggattcttg caacttcgcg
    18061 taccgtcatc ctccgatata gtgtttcttt gccggcagca aaacggtagt cgtttgcccc
    18121 gtgcttttcc atctttgggg cttgcgggtg cagttggcac tgcctgcctg aagcttggac
    18181 ggtaaaaccc tgttcatccc acgctttaac tcggttccgg ctcataaaaa taggggaaaa
    18241 actgccggta aaatattcgt tgttgttgac tgcgtcgggg ttggtcttgt tttgcggggc
    18301 ggaaggtacg gctgtgtcct gcaaatccca aataacgtct ttcaatgtaa tcttgtcttt
    18361 gtcttcgacc gtcgaacctt ttggaaaaga aaattttatt tccaagtctt tacggaaacc
    18421 gatgtagaag acccttttgc gttcctgtgc tacaccgtag tctttggcgt tggccatagt
    18481 caaggttacg tcgtatccgc atccgtcaaa cattttcagc aggttttgta cggctccgtt
    18541 gtggcggttt gccagcattc cgctgacgtt ttccgctaaa aagaattttg gctgtttgct
    18601 tttcaaaata cggatgtagt cgaaaaacaa ctgtccgcgc gcatcgtcga tgccgcgcaa
    18661 agctcccgct tcagaccaag actggcaggg tgggccgccg ataatcccgt cgatttcttc
    18721 agggaaatct tcttctttaa tcttgcgtat atcgccttct atcaaatggg tctttggatg
    18781 gtttgccttg aaggttgccc aaatggtttt atcgtattcg ttggcggcgg ggatttcaaa
    18841 tcccgctttt tcgaaaccca aatccaaacc gccgcaaccg ctaaacaaac taatgatttt
    18901 cataggatta taagtggtag gtgatgagtt ttgcatttct taatcgcgcc gggttgttgg
    18961 gatttttaat tttaatgtcg gaaatggcca gtttggaatc ctgtatggca agcagcttgt
    19021 ctgtattgtt aaaactgttc catttgtctt cgttgataat ggccatgaaa ttgaaacttt
    19081 tttccatatt ccgttggtaa atatagttga agacaaacca tggattttcg attccccaca
    19141 taccccgtac tctcagataa gttatgttga gcggatcaat gcggttgacc ctgcccagct
    19201 ctttggtttc tgcaaactgt atgccgccga tgttgccgat tccttcctta atttgatttt
    19261 ttatcttcaa atagcattcg gcatcggcgc agtagtcgat tccgtaaacc attgccaagt
    19321 gtttgaggtt tttctttttg tcaacgacgc cgacaatata gataatgtct ttctcttccc
    19381 atttttccgc atctttgcag gcttttgtaa gcatgctgtc atcaacagag agctttgatt
    19441 ttgggtggct gctattcagc gccagtgcgg aatctttact ttcaattttc ttaacttcga
    19501 tggcatcccc gtttcgcaac atggcatcag gagggttgga gttgttgccc aaatatgaga
    19561 atacttttgc gtgtcgggct atgcgttggg tttcatttag gttgaaactg ccggaaaaca
    19621 agtcttttac atattcttcc aaagcatcac ctgcctgatt ggcacgattg ttgctttgag
    19681 aatgggattc gaccccgaca acagggttgt tagccaaatt gatgatggca tcgataatgt
    19741 tcatggtttt tccttggggt tttgcggcag attatagcaa aaccgtcagg gtgtttatcg
    19801 gaccgatgcc gtctgaagcg gcaggcgttt cagacggcat cgtgtccggc cgtcagccgt
    19861 gttcccgtgt ttcaagcagg ctttggcgca ggtgttggcg ttcgtgggca tccagccatt
    19921 tgcggcgggt gcgttgcagc aggatgacga gggcggaaat ttcctgacgc atattggtgc
    19981 tgagccagag gaagccctgc cattggtagt ggaggtgttc ggcgagggct tccagttcgg
    20041 ggttgatggc ggtgtcgatg cggatgcggc gggcgtgtct gccgttgatg agggcggcgg
    20101 tttgttgcag gtcggtttgg agcagtgtga agtggcggtc gagcagccgg atttcgctgc
    20161 cgttgagttt gggagattgc agcttggcgg cggtggtcag gagcagctcg gtggtgttga
    20221 cgattttgcg gtgggcgtgc tgcatggctt ccatcatgga ggggctgatg cggctttcgc
    20281 ccgatgtggc ggcgaggtgg ctgcggcttt tgaccatgcg tgcgttgatt tggcgcattt
    20341 tgaccatatt ctgctccaaa cgttcgcgcg tcatacgcct gccgttgctg atttcggcaa
    20401 tcattttgct gcagtcggcc aggttgtcgg caagcatgaa acgccacatc agtgtggatt
    20461 tcagcggcag cagtttggcg gcggcaatgg cgatggcggc gccgatgagg acgttcatcg
    20521 cgcgcatcag gccgctgtcg agccattcgc tgccgttgtc gccgatgagc atgcacatcg
    20581 tcagccccgc cagcataggg acgtagccgt ttttgccgac cgccgcccag ccggccagtg
    20641 cgcttgccgt gccgatggtc aggtagaaga ggaggttgcc gtggaaataa tgctggttca
    20701 gccataaaac gcccaaaccc gcgcccagcc cgatgaccgt accgagcata cgttccaccg
    20761 ccttggagta aatcgcgcct tggaactgga gcatgccgag gacgacgaag acggtcatcc
    20821 ctatccattc gccgtgttgg aggtggagta gccgggcgag tgcggtggcg aacaggacgg
    20881 ctccgccgag ccgcacggca tgtatgaggc ggcggtggcg gtagcgttcg taggagttga
    20941 gccagcggcc ggaaaggcgt ttgcgttg
//
LOCUS       DAWXHA010000023        20818 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.023, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000023 DAWXHA010000000
VERSION     DAWXHA010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20818
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.023"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(133..684)
                     /locus_tag="AABD07_000669"
     CDS             complement(133..684)
                     /locus_tag="AABD07_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355250.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSLWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCIIGLV
                     GRFRLQTASGRVAKAGGAVKAGG"
     gene            922..2394
                     /gene="pyk"
                     /locus_tag="AABD07_000670"
     CDS             922..2394
                     /gene="pyk"
                     /locus_tag="AABD07_000670"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HFB2355251.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HILKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQTEYPEAVSTNLAIAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            2628..3980
                     /locus_tag="AABD07_000671"
                     /pseudo
     CDS             2628..3980
                     /locus_tag="AABD07_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
     gene            complement(4063..4356)
                     /locus_tag="AABD07_000672"
     CDS             complement(4063..4356)
                     /locus_tag="AABD07_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355252.1"
                     /translation="MKANDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSIHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPERPYHFDMKEVLYIFSRIPR"
     gene            complement(4835..5032)
                     /locus_tag="AABD07_000673"
     CDS             complement(4835..5032)
                     /locus_tag="AABD07_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355253.1"
                     /translation="MNTVPKSRIPVKPLPEKTTAEAKVEKWRQLGADHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(5042..6058)
                     /locus_tag="AABD07_000674"
     CDS             complement(5042..6058)
                     /locus_tag="AABD07_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HFB2355254.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQDIRGSIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAEANSPLLYGETSLADIVQQKTGGNVEFKDGVLTAAVRFLPAKDARTAFIDNTV
                     GMATQTLSAALLPYGVKSIVMIDGKAVTKEDAVRVLSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDVERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(6157..7371)
                     /gene="gltS"
                     /locus_tag="AABD07_000675"
     CDS             complement(6157..7371)
                     /gene="gltS"
                     /locus_tag="AABD07_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HFB2355255.1"
                     /translation="MEWAFNSYYTLIAATLVLLVGKVLVKKIKILRDFNIPEPVAGGL
                     IAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENTKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGSVTVILAVQTAVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(7624..7905)
                     /locus_tag="AABD07_000676"
     CDS             complement(7624..7905)
                     /locus_tag="AABD07_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355256.1"
                     /translation="MKQIKASDFTDEHFGLPTILDILSELEKPQPRTDSRPQTTTQRA
                     CPNQFGDGGCVCEVEAVSPTAGMYSDRCSGGFCPRFFCYFKYVYSHDAV"
     gene            complement(7924..9048)
                     /locus_tag="AABD07_000677"
     CDS             complement(7924..9048)
                     /locus_tag="AABD07_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFB2355257.1"
                     /translation="MSNNQPNSQIYEDYWAFTNAFTNYNDQKFCTALNICLDFIDANQ
                     DQPYSNELYEALQQNIAQDSVMASQRTSKAMNLASVRKAINQFVKMGFIEPFLSSYTP
                     LSRDYVQARTNRKRQTLLSKIVYTHSGFQRSVTENSNIRQINFLIKTLVEHPQGKLNK
                     KEIAAMMLVDLKTFQQDYLTETELNDYFQQGIESGFIERKYNQISYLWNLLDKLDDLK
                     RVGDDLYFAEDAQRIFGNLDEITVRKRDPYLHRLYKNQLQEESEEHYGNVKCMLEKLA
                     YPVLIASHIKPFILSDDTEAYDPNNGLLLSRTLDSLFDLKYISFDDEGNMVKSKRLSD
                     DVWRRWCDVKLDNNLLNDKRKSYLAYHRELMLQEDQEFHI"
     gene            complement(9111..10118)
                     /locus_tag="AABD07_000678"
     CDS             complement(9111..10118)
                     /locus_tag="AABD07_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HFB2355258.1"
                     /translation="MNKKYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGSPHAGFMSQRYSEK
                     FYFHDECQQLDLYRKNIGKLNNQYKRALAFTLMRRAMIRKMPYSRFTIPWEKVKQLRD
                     EEYSYAKYGRRRAYHNESFQSHFLQNLDDYNQAVFNNGWRHHAFNQDIFDLLPNIQAD
                     AVYLDPPYTGTMNNYFGFYGLLDSYITSSIPKPFANHFMDKKQAVELFKRVINHLKPF
                     KYWLLSYNNASYPNRDELEEMLGKNGRNVQILETPHVYKVTGKEKKQSHKEILFLVEN
                     T"
     gene            complement(10111..11112)
                     /gene="dcm"
                     /locus_tag="AABD07_000679"
     CDS             complement(10111..11112)
                     /gene="dcm"
                     /locus_tag="AABD07_000679"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HFB2355259.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPRHQLLQKDLTTLTEQDLTNCLNGQSVDLVIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGRTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSFPDNFIFCGSKIAQQQQVGNAVPPLLAKAIAESILKMSENE"
     gene            complement(11143..13416)
                     /locus_tag="AABD07_000680"
     CDS             complement(11143..13416)
                     /locus_tag="AABD07_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HFB2355260.1"
                     /translation="MNITRILSQELSATTVQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRQLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQPQDVEAAAQGYLNENIPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHTQVVEGKETEGEKFSDYFDRREPVRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     GMPESSLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSRLAKSLDAVVEDCVNAVGVDANTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGITAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGAFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRD
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPTNSAMADAFAKLKR"
     gene            13531..14547
                     /gene="galE"
                     /locus_tag="AABD07_000681"
     CDS             13531..14547
                     /gene="galE"
                     /locus_tag="AABD07_000681"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HFB2355261.1"
                     /translation="MTVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRL
                     RQITGRNIPFYQGDIRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVY
                     GSLVLAEEMARAGVLKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERML
                     TDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGVPNNLLPYICQVASGRLPQLSVF
                     GGDYPTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAF
                     EAASGLHIPYRIQPRRAGDLACSYADPSHTKQQTGWETKRGLQQMMEDSWRWVSRNPG
                     RYGD"
     gene            14548..15588
                     /gene="rfbB"
                     /locus_tag="AABD07_000682"
     CDS             14548..15588
                     /gene="rfbB"
                     /locus_tag="AABD07_000682"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HFB2355262.1"
                     /translation="MQTAGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEF
                     IRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYA
                     PSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKP
                     LPVYGDGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVIKTICALLE
                     ELAPEKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQ
                     WYLDNKTRRQNA"
     gene            15693..16559
                     /gene="rfbA"
                     /locus_tag="AABD07_000683"
     CDS             15693..16559
                     /gene="rfbA"
                     /locus_tag="AABD07_000683"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HFB2355263.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNAAFQRLLGDGSDFGIRLQYAVQPSPDGLAQAFIIGEEFIGNGNV
                     CLILGDNIFYGQSFTQTLKQAAAKTHGATVFGYRVKDPERFGVVEFDENFNALSIEEK
                     PQQPKSDWAVTGLYFHDNRAVEFAKQLKPSARGELEISDLNRMYLEDGSLSVQILGRG
                     FAWLDTGTQESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLTKKDVETRAKPLEKT
                     AYGQYLLRLIGK"
     gene            16698..17255
                     /gene="rfbC"
                     /locus_tag="AABD07_000684"
     CDS             16698..17255
                     /gene="rfbC"
                     /locus_tag="AABD07_000684"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFB2355264.1"
                     /translation="MDIIDTALPDVKLLKPQVFTDGRGFFMETFRDGWFKENIADRTF
                     VQENHSNSSKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNRYQLWIPEGFAHGFCVLGDAAEVVYKCTDYYNPETEQVLIWNDPAIGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(17299..19317)
                     /locus_tag="AABD07_000685"
     CDS             complement(17299..19317)
                     /locus_tag="AABD07_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HFB2355265.1"
                     /translation="MNKSLSGSVEKYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDDRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLVLLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFILGVSF
                     YHFIGDSHITGGMAWLLVAVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSI
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWAYIFTGIAIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNADRIGTLFAAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(19512..20633)
                     /gene="dnaJ"
                     /locus_tag="AABD07_000686"
     CDS             complement(19512..20633)
                     /gene="dnaJ"
                     /locus_tag="AABD07_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HFB2355266.1"
                     /translation="MSNQDFYATLGVARAATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGAS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCRGAGKHIKEPCVKCRGVGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
BASE COUNT         5174 a         5818 c         5039 g         4787 t
ORIGIN      
        1 cgaggcaacg ccgtactggt ttttgttaat ccgctataaa agcaaagaaa ccgccattag
       61 cactacaccc ccccaagctg cggctgccaa acacatcggc tgcttctcga cgcacccgct
      121 gaaaaatgcg ccctatccgc ccgccttgac cgcaccccct gcctttgcca ccctgcccga
      181 tgccgtctga agcctgaacc gccctaccag cccgatgatg cacgacaccg ccggaaaggg
      241 catacacaaa gccgtcagca cataacgcgc attccccgta ttgaccacgt ccgcgccctt
      301 cagcagcagc ggcagcgcgt tcgcccactc ccacagcgaa ggcgcgctga acgccaatac
      361 cgccaccagc cccaacatcc ggaacacccc gatttccaag acctgccgcc gccgcaccga
      421 acggttgagc aaaaacacaa ccgccaaccc gaaacagacc accgccgcca taccgccgtt
      481 ggcgacaatc tgcaaactgt tgaacgcaat atcgggcgta accgccaaca cgccttccga
      541 atccggcacg gcacgctgca aatccaaacc ctgcaacaca ttcaacacaa aaccgtagat
      601 caaatcaaaa aacaccacgc ctatcggcaa agcactcaaa acccgccaca tcttcctgtc
      661 cgaccaaccg ttcaaaacct tcattttacc cgaccgcgca agccgccgaa caaaaaataa
      721 atttagccta aatcataaaa ccgtgtaatt ttgcaccaaa aaaggcggtt tgcaggtaaa
      781 atatcaaacc attaatttaa atcatatttt tacagaatat tccgccgcgt tcaccaaatg
      841 gacatcaaac cggttccaaa tttctgtaat tttgcaacaa aataccgcaa aacacccgat
      901 tgagaccgaa aggactttca tatgaaccag acaagccgcg atctgacccg catcagccac
      961 aacaccaaaa tcgtcgccac ccttgggccg ggcagcaaca acgtcgaact gttggaagac
     1021 atgatccgcg tcggcggcct gaacgtcgtc cgcttcaact tcagccacgg cacgcccgaa
     1081 ttccatcagg aaaacgcccg catcgtgcgc gaggcggcaa aacgcgccgg acaggaaatc
     1141 gccatcattg ccgatctgca gggcccgaaa atccgcgtgg gcaaaatcgc cggcggcggc
     1201 atcgaattga acaaaggcga aacattggta ctcgatgccg cgctcgaagg cgaaggcacg
     1261 cgcgaggcgg tcggtttgga ctaccgcgac ctgcccgacg acgttgccgc aggcgatgtc
     1321 ttgtggctgg acgacggcct gctgaccctg accgtggaat ccgtcgaagg cagcaggatt
     1381 atcacaaggg tggaaaacag ccacatcctg aaaagcaaca aaggcatcaa caaacgcggc
     1441 ggcggtttgt ccgcaggcgc gttgaccgaa aaagacttcc gcgacctgaa aaccgcgatt
     1501 gccatcggtt gcgactatct cgccatcagc tttgtgaaat ccgccgaaga cctgcacatc
     1561 gcgcgcgcca aagtcgaaga ggaaatgaag ggcagcactg ccgtccgccc cggtttggtt
     1621 tccaaaatcg aacgcgtaga agcgattgaa aaccttgatg aaatcatcct tgccggcgac
     1681 ggcattatgg ttgcgcgcgg cgacttggcg gtcgaagtcg gacacgccgc cgtccccgcc
     1741 ctgcaaaaac ggatgatccg ccgcgcccgc gagttgcgcc gcttcagcat tacggcgacg
     1801 caaatgatgg aatcgatgat taccaacccc gtgccgaccc gcgcggaagt cagcgatgtg
     1861 gcaaacgcgg tattggacgg caccgatgcg gtgatgtgtt ccgccgaaac cgccgtcggc
     1921 gcgtatccgt ttgaaaccgt cagccaaatg gcgattatct gcgcggctgc ggaaaaagaa
     1981 caggattcgc tcaacggcgt tgccgaacag acagagtatc ccgaagccgt cagcaccaac
     2041 ttagcgattg ccggcggcgc ggtcagcgtg gcgcgcgcgg ttcacgccaa agccatcgtc
     2101 gccctgaccg aaagcggttc gaccgccttt gaaatcagcc gccacaatat taccctgccg
     2161 attttcgcgc tgaccccgag cgtttccgcc caacgccgta tggcgatgta ccggggcgtg
     2221 cgcccgctga ttttggcaac cagcaccgac cacgacacgg cgttgaacga agtcgaaacg
     2281 atgctggtgg aacacaacat cctgcattcc ggcgaccagt acatcatcac cagcggctcg
     2341 caaatgcgcg aatccggttc gaccaatacg ctggaagtgc tgcgcgtcaa ataatccgcc
     2401 ctgagtggaa aatgccgtct aaagccgata ctgtcgggct tcagacggca ttttatttgc
     2461 attccgtcag gtaaaaccga aagaattgtg caaatccggc aacatcggat aaaatcgagt
     2521 gcctatacta aagcgaaaca aggcatttcc gactgccttt tttatttgtc caccgtccgc
     2581 ctttttacgg aaaccgaaat gacccctttc acactgaaaa aaccgtcctg ctgctcggca
     2641 ctgcctttgc cgccgcatct gtccacgcat ccggctacca cttcggcaca cagtcggtca
     2701 acgcgcaaag cacggcaaat gccgccgacg cgtcgaccat cttctacaat cccgccggcc
     2761 tgaccaaact cgacagcagc cagatttccg tcaacgccaa catcgtgctg cccagcattc
     2821 attatgaagc agattccgcc accgacttta ccgggcttcc cgtccaaggt tctaaaaacg
     2881 gcaaaatcac caaaaccacg gtcgcacccc acatttacgg cgcatacaaa gtcaacgaca
     2941 atctgaccgt gggcttgggc gtgtacgtcc ccttcggctc tgccaccgaa tacgaaaaag
     3001 attccgtgtt gcgccacaac atcaacaaac tcggtctgac cagcatcgcc gtcgaacctg
     3061 tcgccgcgtg gaaactcaac gaacgccatt ccttcggcgc aggcatcatc gcccaacata
     3121 attccgccga actgcgcaaa tatgccgact gaggaatccc aaaaaaagcg caaatgctgc
     3181 aagcaacacc ttctaatcct actgccgctg ctcaaatcaa ggccgacgga cacgccgatg
     3241 tcaaaggcag cgattggggc gtcggctacc aactggcgtg gatgtgggac atcaacgacc
     3301 gcgcgcgcgt gggcgtgaac taccgttcca aagtttcaca cacgctcaaa ggcgatgccg
     3361 aatgggcggc agacggcgcg gcggcgaaac aacagtggaa tgacaatatg ctcacaccgc
     3421 tcggttacac ggcgaatgaa aaagccagtg tcaaaatcgt aacgcctgag tctttgtccg
     3481 tacacggcat gtacaaagtg tccgacaaag ccgacctgtt cggcgacgta acttggacgc
     3541 gccacagccg cttcaataag gcggaactgt tttttgaaaa agaaaaaaat attgctaatg
     3601 gcaaaaaatc cgaccgcacc accatcaccc ccaactggcg caacacctac aaagtcggct
     3661 tgggcggttc ttatcaaatc agcgaaccgc tgcaactgcg cgtcggcatc gcttttgaca
     3721 aaccgcctgt ccgcaacgcc gactaccgca tgaacagcct gcccgacggc aaccgcatct
     3781 ggttctccgc cggcatgaaa taccatatcg gcaaaaacca cgtcgtcgat gccgcctaca
     3841 cccacatcca catcaacgac accagctacc gcacggcgaa ggcaagcggc aacgatgtgg
     3901 acagcaaagg tgcgtcttgc gcacgtttca aaaaccacgc cgacatcatc gacctgcaat
     3961 acacctacaa attcaaataa acgttacacc gtttgaatat aaaaatgccg tctgaaacag
     4021 atttccgttt cagacggcat ttttatccgg cagccgatac gcctatctcg gtattcggga
     4081 gaatatatac agaacctcct tcatatcaaa atggtaggga cgctcgggca acaggacggc
     4141 ggcaggcagc ttggtgatgc cgttcaaacc gcgcgggaac agcgcaatcc gctctttgcc
     4201 cttttccgca taatctgctt tgcggttgtg gatggaaact acttcgcgat ggcggtaaag
     4261 cagcgtgttc atttcgatat aggcttcgtt gtggatggct gccgactgtt tctgcaacac
     4321 gtcaatctgc ctgttgagct tgtcgttggc tttcatcagc ctgttgaaga acgacggttg
     4381 ctcctgcagt ttggcggtac aggcttcgat actttccgat accggcccga actgttcgag
     4441 gtatttttcc agacagtttt ccaagtcggt caggcagccg gccatcttgc gggaaaattc
     4501 ttcttcaggc tttccctgcc gaatggacaa tatagcggat taacaaaaat caggacaagg
     4561 cgacaaagcc gcagacagta caaatagtac ggcaaggcaa ggcgaggcaa cgccgtaccg
     4621 gtttttgtta atccactata tttgggaggg gcgtaacccc ttccgaatca ggatggcaca
     4681 tagggcgacg ctttatgtgc cgtcctgtgt gttgaaacat cagcatagga aacacaggaa
     4741 aagccggctg ttttgcgcct gcgtaccgta ttggtcaaaa tgccgtctga aaccgacaac
     4801 agggtttcag acggcatttc cgtcaatttt ccctttatct gccgaacagg ttggcgatat
     4861 tttccatctg ttcttcggta aaaccgtttt cgcccaatct ggcggcaact gcccattcgc
     4921 ccgacaaacc gtggtccgca ccgagctgcc gccatttttc gactttggct tcggctgtgg
     4981 ttttttcggg cagcggtttg acgggaatcc tgcttttggg gacggtattc atcggtttgc
     5041 cctaatcgat ggaatagccg cgaagatact gtatccgttc gcgcgtcatc cgcgtgtcgc
     5101 attggagctt gaggtattcg gcgtattcct gccggtctgc ctgcgcggcg gcttgtcggc
     5161 agttgctgat tttttcctgc gcccacttgc gctgttcgcc gaccaactct ttttgcacgt
     5221 cggtatcgag tcctccccaa agtttggtaa tttcggattc cgcacgttgg ttttgtacgc
     5281 gcgcctcttc cacttcgccc cgtgatacgg taacggtatc ggcacgctcg acgtcgtcgg
     5341 gatgcaggat ttcgggttcg ggcgcgcctt ctgcggcttg gggtacgccc gcatcgccgc
     5401 cggcggcatt gtgttccaaa atgtcttcgg gggtgggttt ggacggttct tcttcacggg
     5461 ctttgccgct caaaaccctg accgcgtctt cttttgtcac cgccttgccg tctatcatca
     5521 cgatgctctt cacgccgtaa ggcagcaacg cggcagacag cgtttgcgtc gccataccga
     5581 ccgtgttgtc gataaatgcc gtccgagcgt ctttggcggg caggaagcgg acggctgccg
     5641 tcaatacgcc gtctttaaac tcgacattgc cgcccgtctt ctgctgcacg atgtctgcca
     5701 aagacgtttc cccatacagc agggggctgt ttgcctcggc atcggcaagc gtttcagacg
     5761 gcacggtaat gttcaaatcg gcgatacaga acgtgcgccc gccttcctgc gtttccgaag
     5821 cgtgttccaa agaaaacgcc aaaccgtagg cggcggcgat aattttgtcg gcatcgacaa
     5881 actgcctgcc gtcttcgcgc gcgaaagaac gcgcttcctg cgtgagcgtt tcctgaatac
     5941 tgccgcgtat gtcctgcaac acggcggggt tggcgcattc caacgccttg ggcggttctt
     6001 ccctgccgca cgctgcaagc agcagggcaa acggcagcgc aatgagtttc cgatacatga
     6061 tgttccttcc aaacggtgca gaccgatggc ggctatcata gcaaaagcac ctgcaggcgg
     6121 taaaccttgc aggcgctttg tcggaaaggc ggaaaatcag cctttaaaga aattcacaaa
     6181 accggtgaga atcgcggcat taatcaaatc gacaaagaac gcgccgacca taggcacaat
     6241 caaaaacgcc ttatgcgacg cgccgaaagt atgcgtgacg gactgcatat ttgccaccgc
     6301 cgtcggcgtt gcgcccaaac cgaaaccgca gtggccggca gccaatactg cggcatcata
     6361 gtcgcgcccc ataaagacat aggtaacaaa agtcgcgtac aaaaccatca ctgcggtttg
     6421 tactgcaaga atcacggtta cagaccccgc caaaccggtc agctcccaca gtttcaaatt
     6481 cagcaacgcc attgccaaga aaagcgaaag cgaagcattg ccgaacacat cgatggcacg
     6541 gtcgaacata ttgaccttga atgcggcggt aaggatgttg cggataacca cgccgccaaa
     6601 cagacaccac acgaatttgg gcaggtcgaa caggtattct ttgtcgaagc cgtccataat
     6661 ctcggcaaac gccagacacg cggcaaacat ggcaagcgtt tcaacggcag attccgccgt
     6721 aatcaggcgg gtgcgttttg cctgctcgaa cacgtcgtcc gcgttgtcgt cctgatcctg
     6781 ttttgtgttt tcaaccggtt tgcggcccat tttgttgatc aggcggcgcg caaccggccc
     6841 gccgatcagg ccgccgaaca ccagcccgaa agtagccgaa gcaataccca aaccggttgc
     6901 gccgaccaag ccgtattgcg tttcaaaatt aggtccccac gcacctgacg tgccgtgtcc
     6961 gcccgtcagc gacaccgaac cggtaatcag accgatgagc gggtccaaac ccaaagccgt
     7021 agccagtccg accccgacaa agttttgcac caagataaat ccgcccacaa tcgcggtaaa
     7081 aaccaccagc ggcaaaccgc ccgccttcaa acgggaaaaa tccgcgctca agccgatgga
     7141 cgtgaagaaa atcagcataa acgcattttg cagcggtttc tcaaatttga agctcacgcc
     7201 gtacgcctcg tgcagcgcaa acaggataat cgcggcaatc agcccgcccg ccacgggttc
     7261 ggggatgtta aaatcacgca agattttgat tttcttaacc aaaaccttgc cgaccaacaa
     7321 aaccaaagtg gcggcaatca aggtgtaata actgttaaac gcccattcca tatcgtttga
     7381 cctcctaaaa tgtttttctt tatatccgcc cgaaggggac gcaagcgcga agatattagg
     7441 ggaatagtta aggcttgtca aagaatcgcc gttttttata gtggattaaa tttaaaccag
     7501 tacatcgttg actcgccttg ccgtactatc tgtactgtct gtggcttcgt cgccttgtcc
     7561 tgatttaaat ttaatccact atacaactat tttttacaaa caaaatgccg tccgaaactc
     7621 cgttcagacg gcatcatggg aatacacata tttgaaataa cagaaaaagc gggggcaaaa
     7681 cccgccgctg catctgtcgc tgtacatccc tgctgtcgga cttaccgctt caacttcgca
     7741 aacgcatccg ccatcgccga attggttggg acacgctcgt tgcgttgtgg tttgcggccg
     7801 gctgtccgtt cgcggctgcg gtttttccag ctcggacaga atgtccagaa tggtcggcag
     7861 tccgaagtgt tcgtcggtga agtcggacgc tttgatttgc ttcacgcgct cgcggttaac
     7921 tgcctaaata tgaaattctt ggtcttcttg tagcataagt tctcgatgat atgccaagta
     7981 agatttacgt ttgtcgttga gcagattgtt atctagcttc acatcacacc aacgtcgcca
     8041 aacatcatct gataaccgct tagatttcac catatttcct tcatcatcaa acgaaatata
     8101 tttcaaatca aataggctat ccaaggtacg acttaatagc aagccgttat ttgggtcgta
     8161 tgcttcggta tcatccgaca ggatgaaagg cttaatatga ctggcaatca atacaggata
     8221 ggcaagtttt tccagcatac atttcacatt accgtaatgt tcttcacttt cttcttgaag
     8281 ttggtttttg tataggcgat gtaaataagg gtcgcgtttc cttacagtaa tttcatccaa
     8341 attaccaaaa atacgttggg catcctcagc aaaatataag tcatcaccta ctcgttttaa
     8401 gtcgtctaat ttgtctaata ggttccataa ataacttatt tgattgtatt ttcgttcaat
     8461 aaatcctgat tctattccct gttgaaaata atcattcaat tctgtttcgg ttagataatc
     8521 ttgttgaaag gtttttaagt ctactaacat catggcggca atttcttttt tatttagctt
     8581 gccttgtgga tgctcgacca gcgttttaat caggaaattt atttgtcgaa tattagagtt
     8641 ttcagttact gaacgctgaa agccagagtg cgtatatacg attttggaaa gtagggtttg
     8701 tcgttttcgg ttagtacgag cttgtacata atctcgtgat aaaggtgtat agcttgataa
     8761 aaacggttct ataaatccca tttttacaaa ttgattaata gctttacgaa ccgaggccaa
     8821 attcatggcc ttgcttgttc tctgcgaagc cataacggaa tcttgggcaa tgttttgctg
     8881 caatgcttca tatagttcgt tgctgtatgg ctggtcttga ttcgcatcaa taaagtcaag
     8941 acaaatattg agtgcagtac aaaatttttg atcgttataa tttgtaaagg cattggtaaa
     9001 cgcccaataa tcttcataaa tttggctgtt tggctgatta ttactcatct ctgtctccaa
     9061 gaatattcga taccaatatt ctgtttttgt atttaagtaa tatctatcat tcatgtattt
     9121 tctactaaaa acagaatttc cttatggctt tgcttctttt cttttcctgt aaccttataa
     9181 acgtgaggcg tttccaagat ttgtacattt cgcccatttt tacctaacat ttcttctaat
     9241 tcatctcggt ttggatatga agcattgttg tagcttaaca gccaatattt aaatggtttc
     9301 aaatgattga ttaccctttt aaataattcg acagcctgct ttttatccat gaaatgattg
     9361 gcaaatggtt tgggtatgga tgatgtaatg taactgtcca ataatccgta aaagccaaaa
     9421 taattgttca tcgtgcctgt gtaaggtggg tctaaataga cggcatcagc ttgtatatta
     9481 ggtaataaat caaatatatc ttgattaaag gcgtgatgcc gccagccatt attgaaaaca
     9541 gcttggttat agtcatccaa attttgcaga aaatgacttt gaaaactttc attgtggtag
     9601 gcgcgtcgac ggccatattt agcataactg tattcttcat cacgcagttg tttaactttt
     9661 tcccaaggaa ttgtgaatcg tgaatagggc attttacgta tcatggcgcg acgcattaaa
     9721 gtaaacgcca aagcacgttt atactggtta ttcagcttcc ctatattttt acggtacaaa
     9781 tcaagttgtt ggcattcatc gtgaaaatag aatttttcgg aataacgctg actcataaaa
     9841 ccggcatgcg ggctgcctga aaaaatcatt gcgacatcat cgtcatttaa tgtttcatgg
     9901 ttgttttcta ttaatgctaa agcaatttgg taattaattg ccaaaatatc gttagtaatc
     9961 acacgatagc cgcgtttttt ggcttcgtag gcaaaggaac agcctccact aaatacatct
    10021 gcaactgtat ctacatcaga cggaagctgg tcacaaatcc aggaagctat tttctcttta
    10081 ttaccgatat agttaatttt cggatatttc ttattcattt tcactcattt ttaaaatact
    10141 ttcagcaata gcttttgcca ataaaggcgg cacggcgtta ccaacctgct gctgctgggc
    10201 aattttgctg ccgcaaaaaa taaaattatc agggaaagat tgtaaggcag ctaattcacg
    10261 aacggttaaa gcccgattct gttcatagtg aaaaactttg cgcatatctc ctgtaataca
    10321 aacggctggt ttgttgctgt tgtaacggat gtatttacgg atatcacctg ttttcggacg
    10381 taatggttca ggaatatcgt tacggttacc tccattttta acaaatgcca ttttttctaa
    10441 catttgtgcc gaatgattca tagcttcatg atttgcaacg tgtggattgc tttcgccagc
    10501 agccagtttt ggaaaatgtc ctattgctga tccaacagtc tgatgggaaa tctgcaaagg
    10561 ttcgggaaag gaaattttgc ctttatccct cctcccgata aatatcactc ggctacgtat
    10621 ctgagggaca ccgaaatcgg ctgcactcag tatcttacat tccaccgaat aaccgatatt
    10681 ctgaaatgct tgaataatct caatacgtgt tctacctgaa ttgtgtgtat agagtcgcgc
    10741 tacattttcc ataacaaaaa aatatggttg gacaatttta actattcgga caaactcttt
    10801 aaataaatgg ttgcgtgggt catctgtaaa tgtccgtcca atctttcctg ccatactaaa
    10861 accttgacaa ggtggtcctc caataaccaa atcaactgat tgtccgttaa gacaattggt
    10921 taaatcttgt tcggttagtg tggttaaatc tttttgcagt aattgatgac gggggaagtt
    10981 ggtacggtaa gtctgacaat aatcagactc catttcaaca gaaagcaatt gttggaatcc
    11041 ggcttgttca aaacccaagg ataggcctcc tgctcctgag aaaaggtcaa tataggtaag
    11101 tggtgtgtgc ataagtcaaa atccataaac tcttcgatta ttttaccgct tcagcttcgc
    11161 aaacgcatcc gccatcgccg aattggtcgg ggcgcggtcg ttgcgttggg gtttgcggcc
    11221 ggctgtccgt tcgcggctgc ggttttcaga cggcatttta tgttttgcgc cgcccggttc
    11281 gtcatccaag cgcatggtca gcgcgatgcg tttgcgtgcg gcatcgactt ccagcacttt
    11341 cacttttacc acgtcgccgg ctttcaccac gtcgcgcggg tcttggacga acttattaga
    11401 cagggcggag atgtgcacca agccgtcctg atggacgccg atgtccacga acgcgccgaa
    11461 gttggcgacg ttggagacca cgccctcgag tatcatgccg acttgcaagt cgctgatttc
    11521 gtggatgcct tcggcaaacg atgccgtctg aaacgcaccg cgcgggtcgc ggccgggttt
    11581 ttccagctcg gacaggatgt ccaaaatagt cggcagaccg aagcgttcgt cggtgaagtc
    11641 ggatgctttg atttgcttca cacgctcgcg gttgccgatg agttcggcgg cggtaatgcc
    11701 ttgttgcgcc agcattttgg cgacgacggg ataggcttcg gggtggacgg cgctcgcgtc
    11761 cagcggctct ttgccgccgt taatccgcaa aaagcctgct gcttgctcga aggttttttc
    11821 gcccaagcgc ggtactttta gcaatttttt tcggctgtcg aacgcgccgt tttcatcacg
    11881 gtaggcgacg atgttttggg caagggtttg attcaagccg gaaatccgcg ccaagagcgg
    11941 ggcggaggcg gtgttcgcgt ccacgccgac ggcgttcacg cagtcttcga ccaccgcgtc
    12001 cagcgatttg gcgagccggc tttggttcac gtcgtgctga tactgcccca cgccgatgga
    12061 tttggggtcg attttgacca actcggcaag cgggtcttgc agcctgcggg cgatggacac
    12121 tgcgccgcgc agggaaacat ctaagtcggg aaactcgcgc gccgccagtt cggacgcaga
    12181 ataaatcgac gcgccggctt cggaaacgac gattttgtgc aggctgcttt cgggcattcc
    12241 gcgcaccagt tcgcccgcga ttttgtcggt ttcgcggctg gcggtgccgt tgccgatggc
    12301 gatgagcttc acaccgtgtt gtttaatcag gcgcgacaac gttgccaaca tattgttttc
    12361 ttgatgcaaa tagacaatga ccgtatccag cagtttgccc gtgtcgtcca ccacggcgca
    12421 tttcacgccg ttgcggtagc cggggtcgag tcccaaagtg gtcagccgcc cggcgggcgc
    12481 ggcgagcagc aagtctttga gattgcgggc gaacacggta atcgcgtcag tgtcggcagc
    12541 ttctttcaaa cgattgagag cttcgagttc cagcgacaaa aagattttcg cgcgccaagt
    12601 caggcgcacg gtgtcgcgca gccatttgtg gccgtctgaa accttgaagc ggcgggcgat
    12661 gatttgctcg tattcgcttt gctgcgtaat cggcgtgtcg tcgggctggt atttgagcgc
    12721 gatgttcaac acgccttcgt tgcgaccgcg caaaaccgcc agcgcgcggt ggctgggcat
    12781 ggcgcgcacg ggttcgcggc ggtcgaaata atcgctgaat ttttcgcctt cggtttcttt
    12841 gccttcaacg acttgcgtgt ggatttcggc ttcgttccac agcttgtcgc gcagcgtgcc
    12901 gatgagttcc gcgtcttcgg caaactgctc catcagaatc gcgcgcgcgc catccagcgc
    12961 ggctttggcg tcggggatgt tttcgttcag gtagccttgc gcggcggctt ccacgtcctg
    13021 cggctgttcg gcaagcaaca cgtccgccag cggctgcaaa ccgtgttcgc gagcgatttg
    13081 cgctttggtg cggcgtttgg gcttgtaggg cagatacagg tcttccagcg cggttttgtt
    13141 gtcggcggct tcgatttgcg ccctgaggtc gtctgaaagc ttgccttgct cttcaatgct
    13201 ttttaacaca acggccttgc gctcttccaa ctcgcgcagg tattgcagcc gctcggcaag
    13261 ctggcgcagc tgcgtatcgt ccagcccgcc cgtggcttct ttacggtaac gcgcgataaa
    13321 ggggacggtc gcgccgtcgt ccaaaagctc gatagcggca ttgatttgca cggtagtggc
    13381 ggagagttct tgggagagga ttcgggtaat gttcataaat tgcctccgtg atgccgtctg
    13441 aacagccgac ggcgcaatgt gggtaatcgt ttggaaaaga tgaagataat actgatatac
    13501 tttgcccgat acaatctgaa aggaatgttt atgaccgtcc tgattaccgg cggcaccggc
    13561 tttatcggtt cgcacaccgc cgtctcgctc gtccaatccg gttacgatgc cgtgattttg
    13621 gataatctgt gcaactcgtc tgccgccgtc ctcccgcgcc ttcggcaaat taccggcaga
    13681 aacataccgt tttatcaggg cgacatccgc gactgtcaga ttttgaggca gattttttca
    13741 gaacatgaaa tcgaatccgt catccatttt gccggtttga aggcagtggg ggaaagcgtt
    13801 gccgagccga caaaatatta cggcaacaat gtttacggca gcctggtgct ggcggaagaa
    13861 atggcgcgcg cgggcgtgtt gaaaatcgta ttcagctcgt cggcaaccgt ttacggcgat
    13921 gcggaaaaag tcccctatac ggaagatatg cgcccgggcg ataccgctaa tccttacggt
    13981 gcgtccaaag cgatggtgga gcggatgtta accgacatcc aaaaagccga tccgcgttgg
    14041 agcgtgattt tgttgcgcta tttcaacccg atcggcgcgc acgaaagcgg acttatcggc
    14101 gaacagccca acggcgttcc caacaatctt ttgccctata tctgtcaagt ggcttcgggc
    14161 aggctgccgc aactgtcggt attcggcggc gactatccga cccccgacgg tacgggaatg
    14221 cgcgactaca tccatgtgat ggatttggca gaagggcata tcgcggcaat gaaggcgaaa
    14281 ggcggcgttg ccggcgtaca tttgttcaac ttgggttcgg gacgcgccta ttccgttttg
    14341 gaaatcatcc gcgcctttga ggccgcatcc ggtttacaca ttccttaccg aatccaaccc
    14401 cgccgcgccg gcgacttggc gtgttcctat gccgacccgt cccataccaa acaacaaacc
    14461 ggctgggaaa ccaaacgcgg cttgcagcaa atgatggaag attcgtggcg ttgggtcagc
    14521 cgcaaccccg gcagatatgg ggattaaatg caaaccgcag gcaaaaaaaa catcctcgtt
    14581 accggcggcg cgggttttat cggctcggca gtcgtccgcc atattatcca aaacacccga
    14641 gattccgtcg tcaacctcga caagttaacc tacgcgggca atctcgaatc gctgaccgac
    14701 attgccgata atccccgcta cgcttttgag caagtggata tttgcgaccg cgccgaactc
    14761 gaccgcgtgt tcgcgcaata ccggcccgat gccgtgatgc acttggcggc ggaaagccac
    14821 gtcgaccgcg ccatcggttc ggcaggcgaa tttatccgaa ccaatatcgt cggcacattc
    14881 gacctgctgg aagctgcgcg cgcctattgg cagcaaatgc cgtctgaaaa acgcgaagcc
    14941 ttccgtttcc accatatttc taccgatgaa gtctatggcg atttgcacgg cacagacgat
    15001 ttgtttacag aaaccacgcc atacgcgccg tccagcccct actccgcctc caaagccgcc
    15061 gccgaccacc ttgtccgcgc gtggcagcgg acttacaggc tgccctccat tgtcagcaac
    15121 tgttccaata attacggccc ccgacaattc cccgaaaaac tcattccttt gatgattctg
    15181 aacgcacttt ccggcaaacc actgcctgtg tacggcgacg gggcgcaaat ccgcgactgg
    15241 ctgtttgtcg aagaccacgc gcgcgcgctg tatcaggtcg ttaccgaagg tgttgtcggc
    15301 gaaacctaca atatcggcgg acacaatgaa aaaaccaatc tcgaagtgat caaaaccatc
    15361 tgcgccctct tggaagaact cgcccccgaa aaaccggccg gcgtggcacg gtatgaagat
    15421 ttaattactt tcgtacaaga ccgccccggc catgatgccc gctacgccgt cgatgcggcg
    15481 aaaatcaggc gggatttggg ctggctgcct ttggaaactt ttgaatccgg cctccgcaaa
    15541 accgtgcaat ggtatttgga caacaaaacc cggcggcaaa acgcataaaa cggcaactgc
    15601 cgttcggaac gcttaggtac gggcaaatag ttttcagacg gcatcccgac gcaatgccgt
    15661 ctgaaaaccc atcgcaaagg aagaaggaaa agatgaaagg catcatactg gcaggcggca
    15721 gcggtacgcg cctatatccg attacgcgcg gcgtatccaa acaactgctg cccgtgtacg
    15781 acaaaccgat gatttattac cccttgtcgg ttttgatgct ggcgggaatc cgcgatattt
    15841 tggtaattac cgcacccgaa gacaacgctg ccttccaacg gctactcggc gacggctccg
    15901 acttcggcat ccgcctgcaa tatgccgttc aacccagccc cgacggcttg gcgcaggcat
    15961 ttatcatcgg cgaagaattt atcggcaacg gcaatgtctg cctgattttg ggcgacaata
    16021 ttttctacgg tcaatcattt acgcaaacat tgaaacaggc cgccgccaag acccacggcg
    16081 caaccgtatt cggttatcgg gttaaagacc ccgagcgttt cggcgtggtt gaatttgacg
    16141 aaaacttcaa cgccttatcc atcgaagaga aaccgcaaca gcccaaatcc gattgggcgg
    16201 taaccggctt gtacttccac gacaaccgcg ccgtcgagtt cgccaaacag ctcaaaccgt
    16261 ccgcacgcgg cgaattggaa atttccgacc tcaaccggat gtatctggaa gacggctcgc
    16321 tgtccgttca aatattggga cgcggtttcg cgtggttgga caccggcacg caagaaagcc
    16381 tgcacgaggc ggcttccttc gtccaaaccg tgcaaaatat ccaaaacctg cacatcgcct
    16441 gcctcgaaga aatcgcctgg cgtaacggct ggctgacgaa aaaagatgtg gaaacacggg
    16501 caaagccttt ggaaaaaacc gcctacgggc aatacctgct gcgcctgatc ggcaaataaa
    16561 taccgtctga acgccccgac ggctttcaga cggcatccaa accgtgccgc gccggcacct
    16621 taaccgacct gccgcacggc gcgcataaaa aatcaaaccg caaaaaaaca gcggtaacga
    16681 taccgccaaa ggactttatg gacatcatcg acaccgccct ccccgacgta aaacttttaa
    16741 aaccgcaagt cttcacagac gggcgcggtt tttttatgga aacattccgc gacggatggt
    16801 tcaaagaaaa tattgccgat cgaactttcg tgcaggaaaa ccactccaac tccagcaaag
    16861 gcgtattgcg cggcctgcac taccaaaccg aaaacaccca aggcaaactc gtacgcgtag
    16921 ttgtcggcga agtgttcgac gtggccgtcg atatgcgcga aggttcgccg actttcggca
    16981 aatgggcggg cgcaaccttg tcggcgcaaa accgatacca gctttggata cccgaaggct
    17041 tcgcacacgg tttttgcgtt ttgggcgacg cggcggaagt cgtgtacaaa tgcacggact
    17101 attacaaccc tgaaaccgaa caggttttaa tatggaacga cccggcaatc ggcataggct
    17161 ggccgcttca aaccgcgccg ctgctttcgc ccaaagacct tgccggcaaa acgtgggcac
    17221 aagccgaaaa gctccgcctt acgctttccc gataaaaaat gccgtccgaa cgtttcagac
    17281 ggcattttct ccgacaggct acctacccgc cttcagtacg cgctgtgcaa agaaaaacat
    17341 cccggtaacg aagaacgcca agcccaacca agaagcggcg gcatcccagt tttgcagatt
    17401 caacgcgagc ggcgcatccg agccgccgtt ggtcacagag aaggcaataa taaacgccat
    17461 aattacacca atcaggcttt caccgacaat caggcctgcc gcgaaaagcg taccgatacg
    17521 gtcggcgttt ttcagacggc cttcgcggtt ttccgccttc ttgccaatga tgtgtttcaa
    17581 caccgccgcc aacaccgcgc ctgccacgat gggcatattg acggacggcg gcagataaat
    17641 gcccataccg accgcaagga cgggcagggc aagtttaccg cctgatgatt ttttcaacac
    17701 caaatcgacg acgattaata ccgctccaat cgcgataccg gtaaagatgt acgcccattc
    17761 gaggttgtgg gcgaaaatgc ccgacgcaat ggtcgtcatc aaagtcgctt gaggggctgc
    17821 caaagcctgc gccgcatcca tgccttcgcg cggcattgcg ccggtaaagc cgtaggcttc
    17881 gtaaagcagt tccaacacgg gcgaaataac cagcgcacca acgatacagc cgataatcag
    17941 ggcgacttgc tgccgccaag gcgtagcttt gagcaggtag ccggttttca agtcttgcag
    18001 gttgtcgttg gaaatcgaag ccacgcagat tactgccgat ccgcaaaaaa gcgtcaacgc
    18061 cagtaagaat ttgcggttgg cctcatccgc caacaaacct ccggattcgc ctaccagcag
    18121 caaaaccagt gaaataacga cgatggacac gatgcccacg ccggaaatcg ggctggaaga
    18181 cgagccgacc aaacctgcca tataaccgca ggcggcggcg accaaaaagc cgatgacgga
    18241 agccaaaagc gtgcaaaccg ccaccaaaag ccacgccatg ccgcccgtaa tgtgcgaatc
    18301 gccgataaag tggtaaaacg acacgcctag aataaacatc atagacaaca cccagaaaat
    18361 catggcttta ggcgacaaat cctgttcggc gcgttctgta gcgggcgcac cgccgccaaa
    18421 actcttgaac gacatcttca tgccttccac cattggcttg agcagcatca aaagcgtcca
    18481 aaccgccgcg atacctatgg ttcccgcacc gataaaacgc actttttcct tccacagctt
    18541 catcgcaaac gccgccattt ccatatcgga aggttgcgga atgtgtgagg agaaatacgg
    18601 cacggcaata ccccaagcaa tcgaaatgcc cagcaggatg gcgatgccgc ccgtcagtcc
    18661 gaccaaataa cccgcgccca acaagaccag tgaaaagccc atcggcagtt ggaaaattgc
    18721 cgtaccgctt ttaaaccaat aactcgcgct atcggcaatc acacgcagac ctccggcgca
    18781 aaagctcatc aatcccgcca acgcgccgcc ggccgccagc tctttgatac cgctgccgcc
    18841 ctgacggtca tccccttctt catgaccgcc cactttcaaa atttcagcag ccgccacacc
    18901 ttccggataa ggcaaatcgc ttttcaccac catcgcgtaa cgcagcggaa tggtgaaaat
    18961 cacccccaaa atcccgccgg caatacataa aagcgtcgtc tgccaaaacg ggaaaccgct
    19021 ccagtagccc gccatcagca aaccgggcag gacgaagatg atggttgaaa gcgtacccgc
    19081 agccgaggct tgggtctgca ccatgttgtt ttccaaaata ttgctgcctt tgaaaaattt
    19141 taaaaccgcc atcgaaatca ccgccgccgg aatcgacgag gcaaaggtca gcccgacttt
    19201 caaaccgagg taaacgttag acgcagtaaa aattacagtg atcaatgcgc cgagtatcat
    19261 gcctcggagc gtcagttcgc ggtatttttc taccgaaccg gataaagatt tattcattat
    19321 tcttcctttg acaacagacg ttcacatatt gttggcatca cgccatgatg tcaagtttta
    19381 aaaagaacag ttaaaaacaa ttatcccacc ctgcccatac ccaattgaaa ataaaaacta
    19441 tttccaaacg aacaaaaaca gccgtatcag ggaggttccc cgatacggct gcttgtttcc
    19501 gaaccttaaa atcaatcaaa caaatcgcgc agcttgtcta aaaacgattt cttgcgcggc
    19561 gtttggtttt ccaagcccgt agaaatccgc tcaaattctt ccaaaagctc tttttgacgg
    19621 tcggtcaaat tgacaggcgt ttcgacaaca atatggcagt acaaatcgcc ggtcgcgctg
    19681 ctgcgtaaag atttgacacc cttacctttc acgcgcatcc tcctgccggt ttgggtttct
    19741 ttggggacgg tgagcttgac tttgccgtcc aaggtcggca cttctaactc cccgcccaaa
    19801 gcagccgtgg caaaactaat cggcagttcg caatgcaaat ccaaaccatc gcgttggaaa
    19861 atcttatgcg cccgaatgcg gacggttaca tacaggtcgc cggcaggcgc gccgtgcata
    19921 cccggcccgc cttcaccgct caaacggata cgctgcccgt catcgatacc ggcgggaata
    19981 ttgacttcca ccgtcttgac cgccttattc cgccccacgc cacggcattt gacgcaaggt
    20041 tctttaatat gtttgcccgc accgcggcag gtcggacaag tctgctgcat acggaaaatc
    20101 gcctgctgga tgtgcaccgt acccgaacct ttgcaagtcg ggcaggtttc cggggatgcc
    20161 cccggtttcg cgccgctgcc gttgcagaca tcacacgctt cataagtcgg aatattgatg
    20221 cgtttcttca caccttttgc ggcttcttca agcgtgattt cgataccgac ctgcacgtcc
    20281 tcaccctgat aatcaggctg ggcgcgcccc gaaccacctc caaacatttg gctgaaaata
    20341 tccccaaagt caaaaccctg cgcaccgcca aatccgccaa accctccgaa gcccccctgt
    20401 ccgccgcctt caaacgccgc atgaccatac tggtcgtaca tggcacgctt ttccttgtcg
    20461 gacaaagttt catacgcctt ttgtacttct ttaaacttct cttccgcctc tttattgtca
    20521 ggattgcggt cgggatggta tttcatcgcc aatttacggt aggctttttt aatctcatca
    20581 tcggtagctg ctcttgccac acccagcgtc gcataaaaat cttgattact cattttttca
    20641 tctaaaaata aaatcacggc ttaaaatgag ggcaattgcg caaaacacaa gacaaacaga
    20701 ctgagacctt tgcaaaattc ccctaaaatc ccctaaattc ccaccaaggc atttagggga
    20761 tttcccatga gcaccttctt ccggcaaacc gcccaagcca tgactgccaa acacatcg
//
LOCUS       DAWXHA010000024        20535 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.024, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000024 DAWXHA010000000
VERSION     DAWXHA010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20535
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.024"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            158..1132
                     /locus_tag="AABD07_000687"
     CDS             158..1132
                     /locus_tag="AABD07_000687"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HFB2355267.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDTFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILAKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LAFTFGHGVYVFTLNAENEFVLTKENPKVPESTKEFAINMSNRRHWLPPVQQYVDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYLQDKRDPSKPGKLRLMYEANPMA
                     LILEQAGASASNAYQAMLDIQPESLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(1291..1509)
                     /locus_tag="AABD07_000688"
     CDS             complement(1291..1509)
                     /locus_tag="AABD07_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HFB2355268.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLANNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
     gene            1703..1966
                     /locus_tag="AABD07_000689"
     CDS             1703..1966
                     /locus_tag="AABD07_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin, Grx4 family"
                     /protein_id="HFB2355269.1"
                     /translation="MKGTPQFPQCGFSARAVEVPTQIDRPFAFVNILENPEIRSTLPL
                     IANWPTFPRLWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
     gene            2140..3954
                     /locus_tag="AABD07_000690"
                     /pseudo
     CDS             2140..3954
                     /locus_tag="AABD07_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
     gene            4018..4182
                     /locus_tag="AABD07_000691"
     CDS             4018..4182
                     /locus_tag="AABD07_000691"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355270.1"
                     /translation="MSNQTKIQAIKQASEQILAICETPNTALQAIHLILRHGGAGRIV
                     LASGVSAGYG"
     gene            4175..4369
                     /locus_tag="AABD07_000692"
     CDS             4175..4369
                     /locus_tag="AABD07_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355271.1"
                     /translation="MADKDVVGAGYLIDFAQTAENLPFDVLPLISLVLNKGDETLKTG
                     MLNKLPDNAKENLRIMGYLP"
     gene            4436..5686
                     /locus_tag="AABD07_000693"
     CDS             4436..5686
                     /locus_tag="AABD07_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HFB2355272.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDRRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPAKRYYGGCEYVDIVEQLAIDRVKELFGAAYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKVLNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETDARVLSNLVADVLANPE
                     DEANLAKVCGQVTALCDKYPVYGN"
     gene            complement(5759..6148)
                     /locus_tag="AABD07_000694"
     CDS             complement(5759..6148)
                     /locus_tag="AABD07_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2355273.1"
                     /translation="MEVHDKIRTLREVNQWTQEEMAEKLEMSVNGYSKIERGKSGINL
                     DKLRQIAQIFNIDVVELLAEQNRSFFFSIGDNTNNHHNIIGSDEMLVFENEKLRSLLD
                     AKDELIRQKDSEIAVLKKLVILLEEKK"
     gene            7088..7879
                     /locus_tag="AABD07_000695"
     CDS             7088..7879
                     /locus_tag="AABD07_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HFB2355274.1"
                     /translation="MKKALLALTIAAISGTAMAQLPDFLGKGEYTVRTDISKQTLKNA
                     DLKEKHKVQKNIGFRADMPFDDIHHGMRFEVSHSRDKKDMYVVTESTTKPFGKDVKEK
                     RTDVYAGYTYTQPISEATKLRAGLGLGYEKYKDAVANEKGTVSTEREAFYTKAHADLT
                     SDLGGGWYLNPWAEVKVDLDAKLKHNATVAGVSADINAKTRGWGVGVGANIGKQITDT
                     VGIEAGPFYKHRHFKASGSFVLDGGNIRVDPTKINEYGVRVGVKF"
     gene            8030..8674
                     /locus_tag="AABD07_000696"
     CDS             8030..8674
                     /locus_tag="AABD07_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFB2355275.1"
                     /translation="MLASVIDFILHIDQHLLSLSAQYGVWIYAILFLIVFCETGLIVT
                     PFLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRCEYLGKTRRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGIIEIARAKLAAKSER"
     gene            8693..10603
                     /locus_tag="AABD07_000697"
     CDS             8693..10603
                     /locus_tag="AABD07_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFB2355276.1"
                     /translation="MNILSVENASFAVGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILTGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     HVSHELENGSSELLLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENKKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGKKSGKIIAELEHASFAYDDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     VFEGQGRLKEYIGGYQDYIDAKSREDKIQTASAPKASDVEPAKEKPKANRTVKLSYKE
                     QRELDALPDEIAALETEQAEINAQLSDPGIFKDYEKAGALQNRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            10625..10991
                     /locus_tag="AABD07_000698"
                     /pseudo
     CDS             10625..10991
                     /locus_tag="AABD07_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11103..12578
                     /locus_tag="AABD07_000699"
     CDS             11103..12578
                     /locus_tag="AABD07_000699"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HFB2355277.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKAGGKHVDVYQNGEIVEQYDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETVYNFEHFAHRLKNTAKANPLGTPDILLMLSQEL
                     AVIDNLSGKIHLIVYADPSQPDSYERARERLEDIRTQLRQSCAIPLSLGSKQTQAVSE
                     FGEEPFKACVDKIKDYIFAGDCMQVVPSQRMSMEFTDNPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGCLKEGVTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEIEPEKRGIYGGAVGVWGFNNDMDLAIAIRTAVIKNNTL
                     FIQSGAGVVADSDPTSEWQETQNKARAVVRAAQMVQEGLDK"
     gene            12662..13600
                     /locus_tag="AABD07_000700"
     CDS             12662..13600
                     /locus_tag="AABD07_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2355278.1"
                     /translation="MQFTSLEICAGAGGQALGLERAGFSHVALIEIEPSACQTLRLNR
                     PDWNVIEGDVRLFQGEGYDGIDLLAGGVPCPPFSKAGKQLGKDDERDLFPEAIRLAKE
                     TDPKAIMLENVRGLLDPKFENYRNHITEQFAKLGYLGQWKLLYAADYGVSQLRPRVLF
                     VALKNEYTNFFKWPEPNSEQPKTVGELLFDLMSENNWQGAHNWRLKAAQIAPTLVGGS
                     KKHGGADLGPTRSKRAWAELGVDGSGLWDSAPPEDFSGMPRLTVRMTARIQGFPDNWQ
                     FFGKKTPMYRQIGNAFPPPVAEAVGRQIIKALKKEN"
     gene            13601..14461
                     /locus_tag="AABD07_000701"
     CDS             13601..14461
                     /locus_tag="AABD07_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-2 restriction enzyme NgoMIV"
                     /protein_id="HFB2355279.1"
                     /translation="MNPLFTQERRIFHKKLLDGNILATNNRGVVSNADGSNTRSFNIA
                     KGIADLLHSETVSERLPGQTSGNAFEAICSEFVQSAFEKLQHIRPGDWNVKQVGSRNR
                     LEIARYQQYAHLTALAKAAEENPELAAALGSDYTITPDIIVTRNLIADAEINRNEFLV
                     DENIATYASLRAGNGNMPLLHASISCKWTIRSDRAQNARSEGLNLVRNRKGRLPHIVV
                     VTAEPTPSRISSIALGTGEIDCVYHFALYELEQILQSLNYEDALDLFYIMVNGKRLKD
                     ISDLPLDLAV"
     gene            14478..15614
                     /locus_tag="AABD07_000702"
     CDS             14478..15614
                     /locus_tag="AABD07_000702"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HFB2355280.1"
                     /translation="MNTPPILPPAMLGILGGGQLGRMFAVAAKTMGYKVTVLDPDPNA
                     PAAEFADRHLCAPFDDRAALDELAKCAAVTTEFENVNADAMRSLAKHTNVSPSGDCVS
                     IAQNRIQEKAWIRKAGLQTAPYQAVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTLDELKAAFAEHGGVDCVLEKMVDLRGEISVIVCRLNDENVQTFDPAENIHENGILA
                     YSIVPARLSADVQQQARQTAQRLADELDYVGVLAVEMFVVGDTHELLVNETAPRTHNS
                     GHHTIDACAADQFQQQVRIMCNLPPADTKLLSPCCMANILGDVWQEDGGEPDWLPLQS
                     RPNAHLHLYGKKTAQKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            15661..16143
                     /locus_tag="AABD07_000703"
     CDS             15661..16143
                     /locus_tag="AABD07_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFB2355281.1"
                     /translation="MSLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LRQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            16296..17297
                     /locus_tag="AABD07_000704"
     CDS             16296..17297
                     /locus_tag="AABD07_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2355282.1"
                     /translation="MQPRSRFKPSVRTKCPGQYRIRRKKHYPAQCLIRCDTVFLQRIQ
                     PLIYQNIPIRTPRHIRQHPTIPRRLQQTGIIRSQRPSSRCRNHEPIFRHRPARKKGLV
                     EKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGANIVIAKTSGNGRYAFL
                     GAYGYGLKANNGNEQEAQKLVASILKNTPVFENGGRAAATTFTQRNIGDVLITFENEA
                     NYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQKTARAYLEYLWSEPAQEL
                     AASLYLRPRNPEVLARHKADFPDLDTFPPEEKFGGWDNIMKTYFADGGVFDRLTAQK"
     gene            17877..18482
                     /locus_tag="AABD07_000705"
     CDS             17877..18482
                     /locus_tag="AABD07_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HFB2355283.1"
                     /translation="MNTDFQKILKQLGKQAKKEAAEKQEAEKNKQKQEYDLDFSQAVG
                     QVSPLKNRQQYYAQSDKTPIKARPKDNRTDEENYFYIGSTYNDPPASFCKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYVEPREGNDGCVRILLKRKLRQQD"
     gene            18545..18907
                     /gene="ssrA"
                     /locus_tag="AABD07_000706"
     tmRNA           18545..18907
                     /gene="ssrA"
                     /locus_tag="AABD07_000706"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(19225..19422)
                     /locus_tag="AABD07_000707"
     CDS             complement(19225..19422)
                     /locus_tag="AABD07_000707"
                     /inference="COORDINATES: protein motif:HMM:NF025063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HFB2355284.1"
                     /translation="MDNAAMESFFGTLKSECFHTCKYDSVTESEAALHEYIRYYNNDR
                     IKLKLKGLSPVQYRIQSLKAA"
     gene            complement(19467..20045)
                     /locus_tag="AABD07_000708"
     CDS             complement(19467..20045)
                     /locus_tag="AABD07_000708"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HFB2355285.1"
                     /translation="MPSVELLLGIVGLPRSTFYYQLAVQSAEGKYADLKRHIHDIYQR
                     YKGRYGYRRIAAAIRHAGIPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKVAPNI
                     LQRCFHSEKPNEKWVTDVTEFDVGGEKIYLSPIMDLFNGEIVSYRIQTRPTFDLAGEI
                     LKGAPEKPGPSEKPMLHSDQGWQYQMFFIKSS"
     gene            complement(20050..20478)
                     /locus_tag="AABD07_000709"
     CDS             complement(20050..20478)
                     /locus_tag="AABD07_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFB2355286.1"
                     /translation="MSDSLVRKWVARYRLHGESGIKRRKHTTKYSVEYKLEAIRPVTG
                     QGMSQKAAADQLNLPDCSVLPQWLRLYRLNGINGLKPKPKGRKPVKKQYPPQTKKADY
                     LKTKEELFAELAYLKAEAAVLKKLDALKEVRQKERNSSQG"
BASE COUNT         5664 a         5457 c         4599 g         4815 t
ORIGIN      
        1 cttgtacttc tcgatccgcc tgccgcgttc cgacttgccc cgcgccgttt ttttccacta
       61 caatcccacg cgatatccgg cggaacgcac caaaggaacg ccccgcagca atctgccgcc
      121 tttcagacgg cacaaacctt tccgaaacga gcaaaccatg gacacactga cccgattcct
      181 ccccgaacac ctgcaacaaa accaactgcc cgaagcactc ggcggcgttt tgctgtccgt
      241 cgtttccgcc tgtaccgaaa tcaacgccaa agtccgcctc ggcgcacttg ccggcgtatt
      301 gggtatggcg ggcacgggca atattcaggg tgaagaccag aaaaaactgg atgttatcgc
      361 caacaacatt atgattgaca cactcaaagc caaccctgcc gttgccggtt tggcaagcga
      421 ggaagaagac actttcgtaa gtgccggtga aaacggacgc tatctcgtcc tattcgaccc
      481 tttagacgga tcgtccaata ttgatgtcaa catttccgtc ggtacgattt tctccattct
      541 cgccaaaccc gaaggcgcat tggcaaccga atcattcctt caaacgggca gacagcagct
      601 tgccgcaggc tatgtcctct acgggcctca aacccagctc gcattcacat tcggacacgg
      661 cgtgtacgta tttacactca atgccgaaaa cgaatttgtg ctgaccaaag aaaacccgaa
      721 agtacccgaa agtaccaaag aattcgccat caatatgtct aaccgccgcc actggctacc
      781 ccccgttcaa caatacgtcg acgagctctt ggcgggcgaa accggtacgc gcggcaaaaa
      841 ctacaatatg cgctgggtag ccagtatggt tgccgaaatc caccgcatcc tgatgcgcgg
      901 cggcgtgttc atgtatctgc aagacaaacg cgacccgtcc aaacccggca aactgcgcct
      961 gatgtacgaa gccaacccta tggccctgat actcgaacag gcgggcgcat cggcaagcaa
     1021 cgcatatcaa gccatgctcg atatacagcc cgaaagcctg caccaacgcg tcgccgtcat
     1081 tatgggcagc agcgaagaag tggattacct caaccgtctg cattcaaaat aggcagagac
     1141 cgtactgata aagaccggcg gcagcgtgaa tccgatactg cgccgatatt tcaagcatac
     1201 cctccggaaa aacagaaaac tgcctttccg aacgataaaa ataccgtctg aaaaattttc
     1261 agacggtatt ttaaaaatta aagctcaaat ttatttgccc gccgcttttt gcaggatggc
     1321 gtacaactcg tctttcagtt tcaatttggc ttttttcagc tcatcgatgg tttccgcacc
     1381 gctggtaacc ggattgttgg ccagaccggt aattttatcg tccagctcgt tatgttcgtc
     1441 gaacagacgg gcgaagcggg aattttcctg tttcaatttg gaaatcaaat cacggtattc
     1501 tgggaacata tcgctttcct ctcttggttt acggttaata aagtcaaatt gaatctttac
     1561 attaattata acaaagataa tatttttatc cagtgttttg ttacacacgg caacaccgtc
     1621 cgcagaaaac cgccccaccg tccgataaaa tcgttgacaa tcttccgctt tacgcataaa
     1681 ttttcagccc ttcctactgt atatgaaagg cacgccccag tttccccaat gtggattttc
     1741 agcgcgcgca gtagaggtgc cgacccaaat tgacagaccc tttgcttttg ttaatatcct
     1801 agaaaatcca gaaattcgca gtactctacc actcatcgcc aattggccaa cctttccacg
     1861 gctttgggtt aatggtgagt taatcggtgg tagtgatatt atcctacaaa tgtaccaatc
     1921 aggtgagcta aaaccactca ttgaagagca tagcccaaag gtctgattac ttaatatctt
     1981 aaaataaata tcaaaaaaga ctgctgatga cattagcggt ctttttttga tggtcaagat
     2041 tgatagtttg gattgaatta tttagccata ttacatacaa taatcagcat gctttgtatg
     2101 aattatcaat caaactcaaa ctcaggcgaa ggagtgcttg tggctaaaac atatttattg
     2161 actgcattga taatgtctat ggtaatctcc ggatgtcaag tcatccatgc caatcaaggt
     2221 aaggttaata ctaattctgc tgtcatcgca ggtgcagacg ctcacacgcc tgaacatgta
     2281 acgggactga ccgaacaaaa gcaggtgatt gcaagtgatt ttatagtagc gtcagccaat
     2341 ccattagcaa cacaagctgg ctatgatatc ttaaagcaag gcggtagcgc tgcagatgcg
     2401 atggtggcgg tgcagacgac actaagcttg gtagagccac agtcgtcagg cttgggcggt
     2461 ggtgcatttg tgttgtattg ggacaatacc gccaaaacat tgaccacatt tgatgggcgt
     2521 gagacggcac cgatgcgtgc gacgccagaa ttatttttgg ataaagatgg ttaaccattg
     2581 aaatttatgg aagcggtggt cgctcggtag gtacgcctgc tatccctaaa ctgacggaga
     2641 caatacatca gcgatacggt gtattgcctt ggggaaaatt atttgatacg ccgatccact
     2701 tggcaaaaca aggctttgag gtgtcgccaa ggcttgccat ctcggttgag caaaatcagc
     2761 agcatttggc acgctatcca aaaacagccg cttatttttt gccgaatggt gtgccgctac
     2821 aagcaggcag cttgctgaaa aatttagaat ttgctgacag tgttcaggcg ttagcagctc
     2881 aaggtgcaaa agctctgcat actggtaaat atgcccaaaa tattgtttca gttgtccaaa
     2941 atgctaagga taaccccggt caattatcct tgcaaaattt atctgattat caagtggtgg
     3001 aacgcccgcc tgtttgtgtg acttatcgta tttatgaagt atgcggtatg ggtgcaccaa
     3061 gctcaggtgg gattgctgtg ggtcagattt tggggatttt aaatgaattt tcacccaatc
     3121 gggtggggta tgatgctgaa ggtttgcgtc tcttgggcga tgcttctagg cttgcgtttg
     3181 cggatcgtga tgtatatctt gggcgatgct tctaggcttg cgtttgcgga tcgtgatgta
     3241 tatttgggcg accctgattt tgtaccagta cccattcgcc agttgatttc taaagactac
     3301 ctaaaacatc gcagccagct gcttgagcag tcggataagg cattgcctag cgtatctgca
     3361 ggcgatttta ttcatgagtg ggcgtcctca caagcgattg agttaccttc taccagtcat
     3421 atatcaattg tggataaggc gggcaatgtg ctatcaatga cgacttccat tgaaaatgcg
     3481 tttggctcaa ctttgatggc aaatggctac ctgctgaata atgagctgac agactttagt
     3541 tttgagccaa taaagcaggg caaacaggtc gccaatcgtg tcgagcctgg caagagacca
     3601 cgctcctcaa tggcaccaac catcgtattt aaagcaggca agccttatat ggcaatcggc
     3661 tctccaggtg gtagccgtat cattggctat gtcgctaaga cgattgtggc acatagtgac
     3721 tggaatatgg atatccaaga tgccatcagt gcacccaatt tattaaatcg ctttggtagc
     3781 tatgaactag aaacgggtac aaccgccgtc cagtggcaac aaacattaaa tgatttgggc
     3841 tataagactg atgtgcgtga gctaaattca ggtgttcaag ccattattat cgagccaagc
     3901 aggctggttg gtggtgtcga tccacgccga gaaggtcgag tgacgggtga ttagaggtga
     3961 agcttgtatt ttgtgaattt gaccgcatta agttaattat taaaataggg ggaaattgtg
     4021 agtaatcaaa caaaaataca agccatcaag caagcttctg agcagatctt ggcaatttgt
     4081 gagacgccaa acacagcatt acaagccatt catctgattt taagacatgg cggggcagga
     4141 agaattgtct tggcaagtgg tgtatcagcg ggttatggct gataaagatg tggttggtgc
     4201 tggttatttg attgattttg cacaaactgc cgaaaattta ccatttgatg tattgccttt
     4261 gattagcctt gtgctaaata aaggtgatga gacgctaaaa accggcatgt taaataaatt
     4321 acctgataat gccaaagaaa atttacgcat tatgggctat ctgccttagg ttttgaagta
     4381 tttttttata cgaaaaacgc tcatgatacc ctgattacac aaaggagccg agaatatgtt
     4441 ttcaaaaagc gttaccctcg cacaatatga ccccgatttg gcagcagcca ttgcccaaga
     4501 agaccgacgc cagcaagacc acgtcgagct gattgcctct gaaaactacg tcagctgcgc
     4561 cgtgatggag gcacaaggtt cgcaattgac caacaaatac gccgaaggct atcccgcaaa
     4621 acgctactac ggcggctgcg aatacgtcga tattgtcgaa caattggcaa tcgaccgcgt
     4681 aaaagaactg tttggcgcag cctatgccaa cgttcaaccg cactccggtt cccaagccaa
     4741 ccaagccgta tatgcttccg ttttaaaacc gggcgacacc attttgggta tgtctctggc
     4801 gcacggcgga cacctgaccc acggcgcgag cgttaatatt tccggcaaac tctacaatgc
     4861 cgttacttat ggcttggatg aaaacgaagt cctcgattat gccgaagtcg aacgcctcgc
     4921 gctcgaacac aaacccaaaa tgattgtggc gggcgcgtct gcctacgcgt tgcaaatcga
     4981 ctgggcaaaa ttccgcgaaa tcgccgataa agtcggcgca tacctctttg tcgacatggc
     5041 gcactatgcc ggactggttg ccggcggcga atatcctaac cccgtgccat tctgcgactt
     5101 cgtaaccact accacccaca aaaccctacg cggccctcgc ggcggtgtga ttttgtgccg
     5161 tgacaatacc cacgaaaaag tgctgaactc ttccatcttc ccaagcctgc aaggcggtcc
     5221 gttgatgcac gttatcgccg ccaaagccgt agcgtttaaa gaagcgttgc aacccgagtt
     5281 caaacaatac gcaaaacaag tgaaaatcaa tgctgccgtc atggcggaag agttggttaa
     5341 acgcggtttg cgcatcgttt ccggccgcac cgaaagccac gttttcctcg tcgacctgca
     5401 accgatgaaa atcaccggca aagccgccga agccgctttg ggcaaagcgc acatcaccgt
     5461 caacaaaaac gccatcccga acgatccgga aaaaccgttc gttacctccg gcatccgcat
     5521 cggttccgcc gccatgacca ctcgcggctt taacgaaacc gacgctcgcg tattgtcgaa
     5581 cttggttgcc gatgtattgg ctaatcccga agacgaagcc aacctcgcca aagtctgcgg
     5641 acaagtgact gccttgtgcg acaaataccc cgtttacgga aactaaacgc ccgatgtttc
     5701 catacaaaat gccgtctgaa cattttccag acggcatttt ttgttttcgg taacattgct
     5761 attttttctc ttccagcaaa atgaccaact ttttcaatac tgcgatttca ctatctttct
     5821 gcctgatcaa ttcatccttt gcatccagca gcgacctcaa tttttcattt tcaaacacca
     5881 gcatttcatc agagccgata atattatgat ggttattggt attgtcgccg atagagaaga
     5941 aaaacgatcg gttctgctcc gccagcagct caaccacatc gatattgaaa atctgggcaa
     6001 tctggcgcag cttgtcgaga ttgatgccgc ttttcccgcg ttctattttc gaatacccgt
     6061 taaccgacat ttccaatttt tccgccatct cttcctgcgt ccactgattg acttccctta
     6121 acgtccgaat cttgtcatgc acttccatcc tgccctccaa ggttaatttt caccactcaa
     6181 acaaccgtaa ccggtatctt cagttgatgg tcggatattt taaaaataaa taatataaca
     6241 caatagtatt ttgataaaaa tttacctaac gaggtacaga catgtattca gaaaacaagc
     6301 ctaaacgcac cgtaaaaatg aaaaaatact ggcagcctgc accctttccc tgtccctttc
     6361 tgcctgtact tcgactcaag taacttcttt tgtcgaggga ctctccgagg gactcgtaga
     6421 tgtcagcgaa gcctttatca caacaaaggc agaatcatat tctgccccgt ctcttcagga
     6481 taagcaaatt ttcataaatc gcgtctcaga acgagcacaa aaaaattaca aagaaagaag
     6541 gaaaaagaaa gaagcagact tactaaattc agcatcgtta ttaaatgaat caacatcaga
     6601 agccctatct gcccttaaaa acgctatcgt aattcctaaa cgccctaaac gctccttggg
     6661 caaaaaatat aaaaacggtt ttcatcctgt aaatacgtgt gcggatgtgg aagctcggtg
     6721 ggcaaacgga gcaatgagag atgttaggga catagaaagg ctaataagcc gaaacgtccc
     6781 tttacgtcgt atcggagacg ccattcaaaa catgtgcatg gaaaccaatg tgtccattag
     6841 gatgtatcgc caggagtgcc gttcagaatc gtcagatttt tatgacgaaa tgcttgagca
     6901 tcacgagaat ttcataggat cctccaaatc attcgcatca tcacttcttc cccttagcgt
     6961 tacaaacttt acaacagaca tggcgtgtac tcccgaattt taatctaatc acactccaca
     7021 actccctatc aatataactg ctacttctct gagtagtatc aaccaaccct taacaaagga
     7081 ctaaaaaatg aaaaaagcac tgcttgcact gactattgcc gccatctccg gtactgctat
     7141 ggcccagttg cccgactttc tgggtaaagg cgaatatacc gtccgtacag acatctccaa
     7201 acaaacgctg aaaaatgccg atttgaaaga aaaacacaaa gtacaaaaaa acatcggttt
     7261 ccgtgccgat atgccgtttg acgatattca ccacggcatg cgtttcgaag tatcacacag
     7321 ccgagacaaa aaagacatgt acgttgtgac cgaaagtact actaaaccat tcggcaaaga
     7381 cgttaaagaa aaacgcaccg acgtgtatgc cggttacacc tacactcaac cgatcagtga
     7441 agccaccaaa ctgcgtgccg gtttaggttt gggctatgaa aaatacaaag atgcggtagc
     7501 taatgagaaa ggaacagtca gcaccgagcg cgaagccttc tataccaaag cgcacgccga
     7561 cctgacttcc gatttgggcg gcggctggta tctgaatcct tgggcagagg ttaaggttga
     7621 cctggacgcc aaattgaaac acaacgcaac tgtagccggt gtctcagccg acattaacgc
     7681 aaaaacacgc ggatggggcg tgggcgtagg tgcgaatatc ggcaaacaaa ttaccgatac
     7741 cgtcggcatc gaagccggcc cgttctacaa acaccgtcac ttcaaagcat ccggcagctt
     7801 cgttttagac ggcgggaaca tccgagtcga tcctaccaaa atcaacgaat acggtgttcg
     7861 tgtcggcgtg aaattctaat cgcggcgata tgccccagac acaaaaccgc aagccttttg
     7921 gtttgcggtt tttgatgttg tagcagaccc taataccgtc tgaaactttt cagacggcat
     7981 ttttccaatc ggttaaaata ccgcctcgac attgtgtttt ggaaaacccg tgcttgcttc
     8041 tgtgattgat tttatcctgc atatcgacca acacctgctc agcctgtcgg cgcaatacgg
     8101 tgtgtggatt tatgcgattc tgtttttgat tgttttttgc gaaaccggtc tgattgttac
     8161 gcccttcctg cccggcgatt cgctcttgtt tgccgccggc gggattgccg cgctgggcgg
     8221 tatggatatt catttgatgg ttgcattatt aagccttgcc gccatactcg gcgacgcgct
     8281 caattttacc gtcggcaaat atttcggcgg caggctgttc gccaaccccg attctaaaat
     8341 cttccggtgc gaatacctcg gcaaaacccg ccgtttttac gaaaaacacg gcggcaaaac
     8401 gattatcatc gcgcgcttcg tgcccatcgt ccgcaccttc gcccccttcg tcgccggtat
     8461 gggaaaaatg cactatgcca aatttatccg ctacaacatc atcggcggct tgttgtgggt
     8521 tatcttgttt tcttacgcgg gctatttctt tgccaacttc cccgtcgtaa aaaacaatct
     8581 gggcttggtg atgggcggca tcattattgt ttccgtcctg cccggcatca tcgaaatcgc
     8641 ccgcgccaaa cttgcggcaa aatccgaacg ttaattgttg gaaattgaca ttatgaatat
     8701 attatccgta gaaaacgctt cctttgccgt cggacatgtc gccctgctcg acaaaacgtc
     8761 cttccaactc gacagcggcg aaaaagtcgg cttgatcgga cgcaacggcg caggcaagtc
     8821 ttcgttttta aaaatcctca ccggcgtgca aaaactcgac gacgggcaga ttattgttca
     8881 aaacaatctc aaaatcgttt atgtgccgca ggagtccttt tttgataagg acgcaaccgt
     8941 atttgatact gttgccgaag gtttgggcga aattcgcgat ttattgcgcc gttatcatca
     9001 tgtcagccat gagttggaaa atggttcgag tgagctctta ttgaaagagc ttaacgaatt
     9061 gcaacttgaa atcgaagcga aggacggttg gaaactggat gcggcagtca agcagacttt
     9121 gggggaactc ggtttgccgg aaaacaaaaa aatcggcaac ctttccggcg gtcagaaaaa
     9181 acgcgtcgcc ttagcgcagg cttgggtaca gaagcccgat gtattgttac tggacgaacc
     9241 gaccaaccat ttggatatcg acgcgattat ttggttggaa aacctgctca aagcgtttga
     9301 aggcagcttg gtcgtgatta cccacgaccg ccgttttttg gacaatatcg ccacgcgcat
     9361 tgtcgaactc gatcgcggta ttttgcgctc ctatcccggc tcgttctcca aatacagcga
     9421 gaaaaaagcg caagagttgg cggttgaagc cgaacacaac cgcctcttcg acaaattcca
     9481 cgcgcaggaa gaggcgtgga tacgcaaagg catcgaagcg cgccgtaccc gcaacgaagg
     9541 ccgcgtgcgc cgtttggaag aactgcgccg ccagcgtgcc gaacgccgca atgtacaagg
     9601 acaggtcaac ttcaaactcg acagcggcaa gaaaagcggc aaaatcatcg ccgaactgga
     9661 acacgcttcg tttgcctatg acgacaaagt tatcatggat aaattttccg ccatcttgca
     9721 gcgcggcgac aaaatcggct taatcggccc aaacggtatc ggcaaaacca ccttccttaa
     9781 gctgattttg ggcgaattgc agccgaccta cggcagaatc cgtatcggca gcaagcagga
     9841 agtcgcctat ttcgaccagt tccgcagcgc cttgaatgaa aacgatactg tgttttacac
     9901 gctcggacag ggcaacgatt acgtcgaagt cggcggcaag aaaaagcatg tgatgagcta
     9961 tttggaagat ttcctgttcc cccctgcccg cgcgcaaagt cctgtttctt cactctccgg
    10021 cggcgaacgc aaccgccttt tgctggcaaa actctttact cgtcccgcca atattttggt
    10081 tttggacgaa ccgaccaacg acttggacat cgacacccaa gaattgcttg aagatctgtt
    10141 gcgcgattac caaggcacgg tcttcctcgt ctcgcacgac cgtatgttcc tcgacaatgt
    10201 aattacccaa agcattgttt tcgaaggaca aggccgtctg aaagaataca tcggcggcta
    10261 tcaggactat atcgacgcaa aatcgcggga agataaaatt cagacggcat ccgcacccaa
    10321 agcatccgat gtcgaacccg ccaaagaaaa acccaaagcc aaccgtacgg tcaaactttc
    10381 ctacaaagaa cagcgcgaac tcgacgccct gcccgacgaa atcgccgcct tggaaaccga
    10441 acaggcagaa atcaacgcgc agctttccga tcccggaatt ttcaaagatt acgaaaaagc
    10501 aggagcattg caaaaccgcg ccgaagaaat cgaaatgctg cttttggaaa agctggaacg
    10561 ctgggagctg ctggaaacca aacagaacgg caatgccgtc tgaaatcaaa caggaagaaa
    10621 aaaaatgttc aaacgacctg aagaaatcat cgtcctgata cttgccgtcc tctggattgc
    10681 cggtacgtat tttctcgccg ccctgtttgg agcggatgct tataccgtgt taaaaatcac
    10741 tgcccttacc ctgctttggt ctgccgcatc attcctcctt tggcaaaaaa aacctcagcc
    10801 ggcatatctg gccgctgctg ctcggctgcc tgaccacctg ttggtggccg tatctgaatc
    10861 aatcggtcgc acccggttct ttaccttggc atgcatcatg gacgttcaaa accatcttag
    10921 ccctgattcc cgcaaccgca ggttatctgt ttaaatggaa acaataccgg cagcgcaaaa
    10981 caaagccgta agcccgtctt ttttcagacg ccatctccgg tcagactgtc aacaattccg
    11041 ataaaatgtt atactcgcgc ccgttgccgc gccgtccgaa accgcctttt gggaaagcag
    11101 aaatgatcag caaacaagaa taccaagccc aagccgccca aggctacaac cgcatcccgc
    11161 tcgtgcaaga actccttgcc gacttggata cgccgctttc cctctatctc aaactcgcca
    11221 accgccccta tacctacctg ctcgaatccg ttgtcggcgg cgaacgtttc ggccgctatt
    11281 cctttatcgg cctgccttgc agccactatc tcaaagccgg cggcaaacac gtcgatgttt
    11341 atcaaaacgg cgaaatcgtc gaacaatacg acggcaatcc gctacccttt atcgaagctt
    11401 tccacaaccg tttcaaaaca cccgaaatcc caagcctgcc gcgctttacc ggcggcttgg
    11461 tcggctactt cggttacgaa accgtctaca atttcgaaca cttcgcccac cgcctgaaaa
    11521 acaccgccaa agccaacccg ctcggcacgc ccgatatttt gctgatgctg tcgcaagagt
    11581 tggcggtaat cgacaatttg agcggcaaaa tccacctcat cgtttatgct gatccctcgc
    11641 agcccgacag ctacgaacgc gcccgcgaac gcctcgaaga catccgcacc cagttgcgcc
    11701 aaagctgcgc catcccactt tccctcggca gcaaacaaac ccaagcagtc agcgagttcg
    11761 gcgaagaacc tttcaaagcc tgcgtcgata aaatcaaaga ctacattttc gcaggcgact
    11821 gtatgcaggt cgtccccagc caacgcatga gcatggaatt taccgacaat ccgcttgccc
    11881 tctaccgcgc cctgcgcacg ctcaaccctt cgccttacct cttttactac gatttcggcg
    11941 atttccacat cgtcggttcc tcgcccgaaa tcctcgtccg ccgcgaacgc gacgacgtca
    12001 tcgtccgccc catcgccggc acgcgcctgc gcggcaaaac ccccgccgaa gaccttgcca
    12061 acgaacaaga tttgttaagc gacgccaaag aaatcgccga acacgttatg cttatcgatt
    12121 tggggcgcaa cgatgtcgga cgcatcagca aaacaggcga agtcaaagtc accgacaaaa
    12181 tggtgattga aaaatactcc catgtgatgc acatcgtttc caacgtcgaa ggctgtctga
    12241 aagagggcgt taccaatatg gacatcctcg ccgccacctt ccctgccggc acactctccg
    12301 gcgcgccaaa agtccgcgcg atggaaatca tcgaagaaat cgaaccggag aaacgcggca
    12361 tctacggcgg cgccgtcggc gtatggggct tcaacaacga tatggatttg gcaatcgcca
    12421 tccgcaccgc cgtgattaaa aacaataccc tcttcatcca aagcggcgcg ggcgtggttg
    12481 ccgactccga cccaacttcc gaatggcagg aaactcaaaa caaagcccgc gcagtggttc
    12541 gggcggcgca gatggtgcag gaagggttgg ataaataaat ttcagacaac ctttgcagat
    12601 gaaaagaagg tcgtctgaaa atcacaaaac aacatcagag atacttacat aaaaaatcac
    12661 aatgcaattc acatcattag aaatttgtgc cggagcaggc ggacaggctt tgggcttaga
    12721 aagggcaggc ttttcccatg ttgcgttaat cgaaatcgaa ccgtcggctt gtcaaaccct
    12781 acgtttaaac cgtcctgatt ggaacgttat tgaaggagat gtccgcttgt ttcagggcga
    12841 aggatatgac ggtattgatt tattggccgg cggcgtgcct tgccctcctt tttccaaagc
    12901 tggaaaacaa ctgggaaaag atgatgaacg cgatttattc cctgaggcta ttcgtctagc
    12961 taaggaaact gaccctaaag ccatcatgtt agaaaatgtg cgggggttac ttgacccaaa
    13021 atttgaaaat tatcgcaacc atattacaga acaatttgcc aagttgggtt accttggaca
    13081 atggaaacta ctttatgctg ccgattacgg agtatcgcaa ctcagaccca gggttttatt
    13141 tgttgcgttg aaaaacgaat acaccaattt tttcaaatgg cctgaaccaa attcggaaca
    13201 accgaaaacc gttggagaac tgctttttga cttaatgtca gaaaataact ggcagggggc
    13261 gcataactgg cgtttgaagg ccgcgcagat tgcaccgacc ttggtcggcg gttcaaaaaa
    13321 acacggcggt gctgacttgg ggcctacacg atccaaacgc gcatgggcgg agttgggtgt
    13381 ggatggttca ggtttgtggg atagtgcgcc gcctgaagac ttttcgggaa tgcctagatt
    13441 gactgtccga atgacggcgc gtatccaagg atttcctgat aactggcaat tttttggtaa
    13501 aaaaacgcct atgtaccgcc aaatcggcaa cgcttttccc ccgccggtag ccgaagcggt
    13561 gggcaggcag attatcaaag ccttaaaaaa ggaaaattga atgaatccgc tttttaccca
    13621 agaacgcagg attttccata agaaattatt ggatggcaat attcttgcaa ccaacaatag
    13681 aggcgtagtc agcaatgcgg atgggagcaa tacccgaagt ttcaatatag ccaaggggat
    13741 tgccgactta ctgcattcgg aaacggtttc ggaaagatta cccggtcaga catcgggaaa
    13801 tgcttttgaa gcaatatgca gtgagtttgt ccaatctgct tttgaaaaat tgcagcatat
    13861 cagacccggc gactggaatg ttaagcaggt cggttctcgc aaccgtctgg aaatcgcacg
    13921 ttatcagcaa tacgcacatc tgacagcctt agccaaggct gccgaagaaa accccgaatt
    13981 ggctgccgcc ttgggcagtg attacaccat tactcccgat attatcgtta ccagaaattt
    14041 gattgcagat gcagaaatca accgtaatga atttttagtt gatgaaaata ttgccacata
    14101 tgccagtttg cgtgcgggta atggcaatat gccgctgctc cacgccagta tctcttgtaa
    14161 atggacgatt cgcagcgaca gggctcaaaa tgcccgttct gaaggattga atttggttag
    14221 aaacagaaaa ggcagactgc cgcacattgt tgtcgtaacg gcagaaccaa cgccaagccg
    14281 catttcatct attgccttgg gtacagggga aatagattgc gtttaccatt ttgccttata
    14341 tgagctggaa caaattttac aatcattgaa ttatgaagac gctttggatt tgttttacat
    14401 catggtcaat ggtaaacgat taaaagatat ttccgacctt cccttagatt tggcagttta
    14461 aacagaatta ttccactatg aacacacccc ccatccttcc tcccgccatg ctcggcatcc
    14521 tcggcggcgg acaattaggc agaatgtttg ccgttgccgc taaaaccatg ggctacaaag
    14581 taaccgttct cgatcccgac ccgaatgcgc cggcggcgga atttgccgac cgccatttgt
    14641 gcgcgccgtt tgacgaccgg gccgcgttgg acgaattggc aaaatgcgcg gcggttacga
    14701 ccgaatttga aaacgtcaat gccgacgcga tgcgctctct ggcaaagcat accaacgttt
    14761 cccccagcgg cgactgcgtg tccattgcac aaaaccgcat tcaggaaaaa gcgtggatac
    14821 gcaaagcagg cttgcaaacc gcgccgtatc aggcggtttg caaggccgaa gacattactg
    14881 aagcaagcgc gcaatttttg cccggcatcc tgaaaacggc tacgttgggc tacgacggca
    14941 aaggtcaaat ccgcgtcaaa acgttggacg aactcaaagc cgcgtttgcc gaacacggcg
    15001 gcgtggattg cgttttggaa aaaatggtgg acttgcgcgg cgagatttcc gtgatcgtat
    15061 gccgtctgaa cgatgaaaac gtgcaaacct tcgaccccgc cgaaaacatc cacgaaaacg
    15121 gcatcttggc ttattccatc gtccccgcgc ggctgagtgc cgacgtgcag caacaggcgc
    15181 ggcagacggc gcaacgcttg gcggacgaat tggattatgt cggcgtattg gcggtagaaa
    15241 tgtttgttgt cggcgacaca catgaattgc tcgtcaatga aaccgccccg cgcacgcaca
    15301 attccggcca ccatacgata gatgcctgcg ccgcagacca gttccaacag caggtgcgca
    15361 ttatgtgcaa cctgccgccc gccgacacca aattattatc cccttgctgt atggcgaata
    15421 ttttgggcga cgtttggcag gaagatggcg gcgaaccgga ttggctgccg ttgcaaagcc
    15481 ggccgaatgc acacctgcac ctatacggaa aaaaaaccgc acagaaaggt cggaaaatgg
    15541 gacactttac cgttttgacc accgattcgg acaccgcatt tcaagaagca aaaaaactgc
    15601 atcagtccct ataatccgac caacggcaca gatgccgtct gaagccgccg acataccgcc
    15661 atgagcctgc tgacactgtt acgccccgcc accgtgcaag actgcaaaga catcttcaaa
    15721 gtccacctgc actccgtcca atacacctgc atcctcagct acaacgaaca cgccctaaaa
    15781 gtatgggaag gcttgttaaa cacagaaagc tacctgccga ccatttccga tcccgacaaa
    15841 gcactttggg ttgccgaata caaaggcaac atacagggat ttttccaaat cgactgccaa
    15901 gaagcacaac tcgatgcgct ttacgtccac cccctgttcc acaatctcgg actgggcact
    15961 gccctgctcc gtcaggcaga aaccatcgcc cacaaatccg gtttgagctt tctgaaactc
    16021 tacgcatctc tcaactccgt cccgttttac cttctcaacc gctacgaatc gctcggttcg
    16081 gcagtattgc agcttgaccc cagcatcaaa atcaaatgcg aactgatgcg caaacacctc
    16141 taatcccgcc ttataaccaa aactgataat cttcaaatca aacattattt ccacaagcgc
    16201 agacagccgt ataaagttgc cccatctacc aaccgacagg acaagcatat gaaaacctac
    16261 gcacaggcac tctataccgc agccctgctt accgcctgca gccccgcagc cgattcaaac
    16321 catccgtccg gacaaaatgc cccggccaat accgaatccg acggaaaaaa cattaccctg
    16381 ctcaatgcct catacgatgt gacacggtat ttttacaaag aatacaacca cttatttatc
    16441 aaaacatacc aatccgaaca ccccggcaca tccgtcagca tccaacaatc ccacggcggc
    16501 ttcagcaaac aggcattatc cgtagccaac ggccttcaag ccgatgtcgt aaccatgaac
    16561 caatcttccg acatcgacct gctcgaaaaa aaggactggt agaaaaaggc tggcaacaag
    16621 ccctccccga tcacgccgca ccctacacca gcactatggt tttccttgtc cgaaaaaaca
    16681 accccaaaca gatccgcgat tggaacgacc ttgccaaaga cggcgctaac atcgtcatcg
    16741 ccaagacctc gggcaacgga cgctacgcct tcctcggcgc atacggttac ggtctgaaag
    16801 ccaacaacgg caacgagcag gaagcccaaa aactcgtcgc atccatcctc aaaaacacac
    16861 ccgtttttga aaacggcgga cgcgccgccg ccaccacctt cacacaacgc aacatcggcg
    16921 acgtactcat cacttttgaa aacgaagcca actacgtcag caaaaaactg acccaaggac
    16981 agtttgaaat cgtctatccg agctacacca tttccgccga aagccccgtt gccgtcgtca
    17041 acagcgtcgt cgcgaaaaaa ggcacgcaaa aaaccgcccg cgcctatctc gaataccttt
    17101 ggagcgaacc ggcgcaagaa ctcgccgcct cactctacct gcgtccccgc aaccccgaag
    17161 tattggcacg acacaaagcc gacttccccg acttagacac cttccctccc gaagaaaaat
    17221 tcggcggatg ggacaacatc atgaaaacct acttcgccga cggcggcgta ttcgaccgcc
    17281 tgaccgcaca aaaatgacca ttatgccgtc tgaaccgcct ttcagacggc atttcacaca
    17341 tcaaaacaga aaaccgcacc caaaatcatc atcacaagac acaacggcaa accggataca
    17401 aaacccaaca ccgccgccaa aatgccgtct gaagccgtcg gcgcaaccat ccttatctgg
    17461 ggcgcgcctc atcaaagggg cgcataactt tccttaacca tcccttttga cagccaaata
    17521 aacagtgctt ttgcctgtca gaaacaaaac caatattttg cggttcgtat cggaacattt
    17581 ataaaacatc agatttccgt gtttcgcgtt tccggcaatt caagattagc aaaaccatta
    17641 acctgcttcg caaggcaggt ttttaaaact ttatcaggcg ttcgagcata tcggttcgac
    17701 cgacccgcat ttccggcaat caacactgcc gacggttgcc gcatttcttt ttgatataca
    17761 atcacacttt caaaaaacat acgacggcaa caaaatcatc ctccccccgc ttggcaaaca
    17821 tccggcaaat taaaaccccg cccgaaacag ccatcggaca aataacagga aaaaatatga
    17881 ataccgactt ccaaaagatc ctcaaacaac tgggcaaaca ggccaaaaaa gaagcggcag
    17941 aaaaacagga agccgaaaaa aacaagcaaa aacaagaata tgatttggat ttttcacaag
    18001 cagtcggaca agtctcccca ttaaaaaacc ggcagcaata ttatgcgcag tccgacaaaa
    18061 cccccatcaa agcccgtccc aaagacaacc gcaccgacga agaaaactac ttctacatag
    18121 gcagcacata caacgaccca cccgccagct tctgcaaaaa cggacaggga aaaaacgaca
    18181 tccaacgcct gaaaaacgga tactatcccg tcgttaccga tgtcgacctg cacggctaca
    18241 cccaagaaga agcacaaaaa gtcctcaacg aattcatcgc attcacccaa aaacgcggcg
    18301 tatgcggcga aatcatccac ggcagcggat taggttccaa aggctacaaa cccgttctga
    18361 aaaacatgac ccgaaactgg ctgatgcaac accccgacgt actcgcctac gtcgaacccc
    18421 gggaaggcaa cgacggctgc gtccgcatcc tgctcaaacg caaattaagg cagcaagact
    18481 gacaaatttc tccgacagac ttggcagcac cgcacaatat ccgtataatt tgcaaaccat
    18541 ttctgggggc gaccttggtt tcgacggggg ttgcgaagca gatgcgggca taccggggtc
    18601 tcagattccc gtaaaacact gaattcaaat agtcgcaaac gacgaaactt acgctttagc
    18661 cgcttaaggc tagccgttgc agcagtcggt caatgggctg tgtggcgaaa gccaccgcaa
    18721 cgtcatctta cattgactgg tttccagccg ggttacttgg caggaaataa gacttaaggt
    18781 aactggtttc caaaaggcct gttggtcggc atgatggaaa taagattttc aaatagacac
    18841 aactaagtat gtagaacgct ttgtagagga ctttcggacg ggggttcgat tccccccgcc
    18901 tccaccatgc cctattttca gcagtatcct gcaacacaaa aaatccttga acttcaaaag
    18961 tttcaaggct tttttattgc cttgaatatg atggcgtatg cttgagtttt cgcaatttat
    19021 ggggtaactt ttggggtaac ttttcaggaa tcaccctaaa aaatatctta aaaatacaaa
    19081 agccatcacg cattttttaa aaaggttacc caaaacttaa atgaagcctt tatttataag
    19141 gcttgcagct ttccaaacaa gttaccccca aacggataaa aaatgccgaa gctgaactgc
    19201 accccaaaaa gtcggacagt ttaatcaagc ggctttcagg gactgaattc tgtactgaac
    19261 agggctcagt ccttttaatt tcaacttgat tctatcgttg ttgtagtaac ggatatattc
    19321 gtgcagtgcc gcttccgatt cggtaacgga atcatatttg cacgtatgga aacattccga
    19381 tttcaacgtt ccgaagaaac tttccattgc cgcattgtcc aagcagtttc ccttgcggga
    19441 cagactctga accagaccgt tgcctttcaa ctgcttttga taaaaaacat ctgatattgc
    19501 caaccttgat ccgaatgcag catcggcttt tcagacggcc ccggtttctc cggcgcacct
    19561 ttcagtatct cgccggccaa atcgaaagtc gggcgggttt gaatacggta actgacgatt
    19621 tccccgttaa acaaatccat aatcggagaa aggtatatct tttctccgcc tacatcgaac
    19681 tcggtaacgt ccgttaccca tttctcattc ggcttttctg aatggaaaca gcgttgcagg
    19741 atgttcggcg caactttgcc gacttctcct ttgaacgagc ggtatttgcg ccgccgtatc
    19801 actgccttca gccccgtctt cgccatcaga cggctgactt tcttgtgatt gaccggtatt
    19861 cctgcgtgac ggatggctgc cgcaatcctc cggtagccgt atcttccctt atatcgttga
    19921 taaatatcat ggatatgtcg tttcaaatcg gcatatttgc cttctgccga ttggacggcc
    19981 aattggtaat agaaggtgct gcgtggcagt ccgacaatcc ccaacagcag ttcaacggat
    20041 ggcatttcct taaccctgcg acgagttgcg ttctttctgc cgcacttctt tcaaggcatc
    20101 gagctttttt aggacagccg cttccgcttt aaggtaagcc aattccgcaa acagttcttc
    20161 cttggttttc agatagtcgg cttttttcgt ttgcggcgga tactgttttt tcacgggctt
    20221 tcttcctttg ggtttgggct ttaaaccgtt aataccattc aaacggtaga ggcgcaacca
    20281 ttgcggcaaa acggagcagt cgggcagatt cagttggtct gcggcagctt tttgggacat
    20341 tccctgcccc gtcaccgggc ggattgcctc aagtttgtat tcgaccgaat attttgtcgt
    20401 atgctttctg cgtttgatgc cgctttcacc gtgtaatctg tatcttgcca cccatttgcg
    20461 taccaatgaa tcggaaatgg aaaaatatag tgaattaaca aaaatcagga caaggcggcg
    20521 ggccgcaggc agtac
//
LOCUS       DAWXHA010000025        20351 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.025, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000025 DAWXHA010000000
VERSION     DAWXHA010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20351
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.025"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            58..704
                     /locus_tag="AABD07_000710"
                     /pseudo
     CDS             58..704
                     /locus_tag="AABD07_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709966.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
     gene            complement(776..2521)
                     /gene="recD"
                     /locus_tag="AABD07_000711"
     CDS             complement(776..2521)
                     /gene="recD"
                     /locus_tag="AABD07_000711"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HFB2355287.1"
                     /translation="MELQTDEFAQAAARAAIRFLERYAGSGNEVLANCTERLFQALQN
                     GHSFIRLSGDEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDAAGARQNLAKWFQGAGSEGQRDAAALALLQFFMVITGGPGTGKTTTVAKLLA
                     LICGENENLPHIALAAPTGKAAAHMARALHRSINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLSPPKMQAAFDHIRPLPFDVLIVDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSYVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSDAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGKKTFCQAVNTVKVR
                     QTALDSMLERVFSQE"
     gene            complement(2588..3283)
                     /gene="lolD"
                     /locus_tag="AABD07_000712"
     CDS             complement(2588..3283)
                     /gene="lolD"
                     /locus_tag="AABD07_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HFB2355288.1"
                     /translation="MSDLILKCEGVGKRYRDGGLDVPVLYGLDLEIRTGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRALNQRRLGDLRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSRKEAVETAMAMLDKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPRQGANA"
     gene            complement(3276..4523)
                     /locus_tag="AABD07_000713"
     CDS             complement(3276..4523)
                     /locus_tag="AABD07_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HFB2355289.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQAL
                     LANAGEIRGVQIRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGGKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTYSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLWGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            4749..5027
                     /locus_tag="AABD07_000714"
     CDS             4749..5027
                     /locus_tag="AABD07_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355290.1"
                     /translation="MNIRKISALCAVAVFTVSTAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPVSLNGGSGSITVSGSSAAQCVFTVGSGGTLQIQGLNCK"
     gene            complement(5083..5700)
                     /gene="recR"
                     /locus_tag="AABD07_000715"
     CDS             complement(5083..5700)
                     /gene="recR"
                     /locus_tag="AABD07_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HFB2355291.1"
                     /translation="MNSKKQDAFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEE
                     LVDALQTALRQVRHCARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNIEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLDGGEIEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(5767..7305)
                     /locus_tag="AABD07_000716"
     CDS             complement(5767..7305)
                     /locus_tag="AABD07_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFB2355292.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISEHSINNAMQNEQADGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIV
                     DDPNFHDANGKFSHALLSQYLSQRHMSEDQFVEEIRDQFALQNLVSLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVA
                     LNLKNFADKQTVSETEVKNAFEERVARLPAHEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKNLLFEEAKDAVRQAYIRTEAAKLAENKAK
                     EVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLTGLP
                     APVIVEVQAVTPPEDIAAQLPPAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(7354..7728)
                     /locus_tag="AABD07_000717"
     CDS             complement(7354..7728)
                     /locus_tag="AABD07_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HFB2355293.1"
                     /translation="MIILHGIPNCDTVKKAKNRLAGYGLEFGFRDFKKQMPSEAEICS
                     WLEQVPLATLFNKRGTSWRKLDAETQQKALSSTAEAVKLMSEMPSLIKRPVLECGSRV
                     YVGFSEETYDGIFNRQAPCRQG"
     gene            7878..9506
                     /locus_tag="AABD07_000718"
     CDS             7878..9506
                     /locus_tag="AABD07_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HFB2355294.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLRQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFRNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGREGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALDKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            9585..10817
                     /locus_tag="AABD07_000719"
     CDS             9585..10817
                     /locus_tag="AABD07_000719"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HFB2355295.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPKTHEEYALARTERKTAKGYAGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRAARFAARYGFEIAEETIKLMRQM
                     VENDEADALVAERVWQELAKGLMEKNPRKMIEMLRECGVLKVLLPEVDALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPPDILPRHHGHDINGVE
                     PVREVNQRLRAPRQCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRAQGKAHFIAEQI
                     DRARLAQIAPLQKAFRGA"
     gene            11236..11544
                     /locus_tag="AABD07_000720"
     CDS             11236..11544
                     /locus_tag="AABD07_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355296.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGETRLLNEILEKFNF
                     DVVQAQALAQAVMQQVRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            11626..12657
                     /gene="ruvB"
                     /locus_tag="AABD07_000721"
     CDS             11626..12657
                     /gene="ruvB"
                     /locus_tag="AABD07_000721"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HFB2355297.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQH
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMDEEGA
                     MEVAKRSRGTPRIANRLLRRVRDFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(12902..13585)
                     /gene="rpe"
                     /locus_tag="AABD07_000722"
     CDS             complement(12902..13585)
                     /gene="rpe"
                     /locus_tag="AABD07_000722"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HFB2355298.1"
                     /translation="MTAYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQV
                     RAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAM
                     RAELEKAAG"
     gene            13786..14166
                     /locus_tag="AABD07_000723"
     CDS             13786..14166
                     /locus_tag="AABD07_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HFB2355299.1"
                     /translation="MALLSCQLSHAATAYIPPNDFQPNCDIRRLGLTQGQHNELRKIR
                     AAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEARDYVESRYHSSMDFAVDEL
                     EIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(14179..15042)
                     /locus_tag="AABD07_000724"
     CDS             complement(14179..15042)
                     /locus_tag="AABD07_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFB2355300.1"
                     /translation="MELNEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHVFPLSRLAGVGRQTELLVRNTEQFIAGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLALLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVMVYATSNRRHLMPEYLDENAGTTGVRGEIHQKEAVEEKVSLSDRF
                     GLWLSFYPFDQNDYLAAVRSWLEDFDVPYDEAARTAALQWAQMRGNRSGRSAWQFACD
                     WAGRLPEQRAP"
     gene            complement(15050..16444)
                     /locus_tag="AABD07_000725"
                     /pseudo
     CDS             complement(15050..16444)
                     /locus_tag="AABD07_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261464.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase subunit alpha"
     gene            16651..18420
                     /locus_tag="AABD07_000726"
     CDS             16651..18420
                     /locus_tag="AABD07_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HFB2355301.1"
                     /translation="MILPTRFSDGIPLSLRLKLLTGLWVGLAALSVVLTLLLSFRLEN
                     AASVIEEAGNLKMQAYRLAYMAGEGSPRAQIDNQIAEFEKSLKRISQSDAIHPLIPSD
                     NPLAYDLIQSMLIIDWQANILPPLQAYRRPTQIELYRFAGNIELFLQALENAGEKNTW
                     WLRRFQWVIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGQRHFDIPVPEDGTPE
                     FKQVGRCFNQMALRLKTLYDDLEGQVAEQTHNLEKQNRNLTLLYRTTRDLHQSYTPRQ
                     AAEEFLNHILPAVGAQSGNICLENGSDTDISVHTAEHGKKPPLEKYHDETFPIEYQNE
                     KLGMLSLGFSDGTSLTGDDRTLLQTLIRQLGVSLAGAKQEEEKRLLAVLQERSLIAQG
                     LHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFRT
                     KISNKEFPEAVADLFARFTQQTGITVETVWENGSFLPTQDEQLQMIFILQESLSNIRK
                     HARATHVKFTLSEYGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIRAVL
                     EIRSQAQQGTTVSLTGAPKESLP"
     gene            18417..19073
                     /locus_tag="AABD07_000727"
     CDS             18417..19073
                     /locus_tag="AABD07_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HFB2355302.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLAECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQRTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVPE
                     "
     gene            complement(19229..20137)
                     /locus_tag="AABD07_000728"
     CDS             complement(19229..20137)
                     /locus_tag="AABD07_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFB2355303.1"
                     /translation="MRFPLPITNAVLKITNGAMEFKSEDIGTIKLTKATFHLKKDTSL
                     TTPEGTTLLSGGTLTLSNTGISLSGTTSVFEKGTFTNGGIITLANQSYADKLTIEGNY
                     VGKDGVLKVNTEWNSPGDDQGGNSQSDLLEITGDASGKTTVISVGKDGKENIIDGSIG
                     ELSDRYKRSAAVVKVLGQDKGAETGKLNIEDAKHTYTMRDTFSGTAKTTGAGELQLVS
                     HKDEAGATEYFWTLTTPNQDKTIITPSAPAYALVPRQNLESGYAMLDTLHQRRGENQT
                     LSRDRQGNYRQDAEATDIKATKAPWV"
BASE COUNT         4689 a         5869 c         5103 g         4690 t
ORIGIN      
        1 gatgcgtcaa atgtcagctt ggatatgtcc aatcctacag tgttacgcaa tatataaggg
       61 gttgccgttc cgcagttggg cggcagcata cacgttcctt tcggcgtatt ctcgccgttg
      121 cgcggcgaat atctcgacct gcttgcccat gcgccgtcaa cgggttttca gacggcattc
      181 gatatcggga cgggctcggg cgtacttgcc gccattttgg cgaaacaggg cattccttcc
      241 gtcatcggca cggataccaa tccgagggcg gttgcctgcg cccgtgccaa tattgcccgt
      301 ttgggttttg aaaaacaggt tgaaatccgc gaaaccgatt tatttcccga agggtttgcc
      361 gacctgattg tctgcaatcc gccctggctt cccgccaagc cgacttccgc cgtcgaatcc
      421 gcgttatacg accccgaatc tgcgatgctg gctgcgtttt tgcgtgatgc gccaaacatc
      481 tgaatcccga cggagaaatc cgtcttatca tttccgacct cgccgtgcat ttggggctgc
      541 ggtctgccga ctttttggaa aaggcattta tccgggcggg tttgcgtgtt gaggatgttt
      601 tgaaaaccaa accggttcac aaaaaagctg ccgattcgaa cgatccgctg gcttttgccc
      661 gaaacaggga aactactttc ctgtgccgtt tgaaaaaggc ataaggggcg gtggcgtgct
      721 tccgacggta ggcatcggaa cgcccgcgcc gccggcacgg catcattcgg gcggattatt
      781 cttgtgaaaa tacccgctca agcatactgt ccaacgccgt ctgacggact ttgacggtgt
      841 ttaccgcctg acaaaatgtc tttttgccgc cgaaaaatac gaatttttcc ctggcgcggg
      901 taatggcggt atataacagc tccttactca atccggacaa tgcatcgtcc ccttcgtccg
      961 aaggtgcgtc ggaaggcggc agcagccaga cttcccgata ttccgaacct tggcttttgt
     1021 ggacggtcat ggcgaatgcg ggttcaaatt cgggcaggca gcttaccgct acctttttaa
     1081 atccgtccgc atcggcaaaa taggcggcaa ggctgccctg ccgtccgaca tcttccataa
     1141 tcagtccgat gtcgccgttg aacagctcaa gcgcgtagtc gttctgtctg atcataatcg
     1201 gctctccggc gaaataggcc aaatgttccg gtatgttcat tttgcggcgt acatagctgc
     1261 aataggcttc gttgaagtct tccgcatcct gccgccaagc tgccagaacc acgatatccg
     1321 agatacctgc gtatgcggct tcgatattgc cgtcttttac cgcctgccaa taggctttgt
     1381 gcgcccggta caacctttcg acccgagcat tcggactgca ttccgaatgt tccagttcgt
     1441 ccggaaaccg gtcaaacaat gcccacgccc cttcatcgcc cgatacggcg gcacgggcaa
     1501 ggcagccgat gccgctgttg tcgccgaagc ggtggctgaa cgacagatgg gcggtgtttt
     1561 gcgccaacac gggcggattt gcgctgacgc tgaaaccgtg ttccggaagg aaaccggcca
     1621 gcctttggtg cgtttctccg tccaaaacgg ttttttgcga caaaacggac agcaccgccc
     1681 cgattccgac ggacgggagc tggttttcat cgcccagcag aatcacgcgc gcgccggttt
     1741 tgaccgcttt caaaagttgc agcatcaatg cggtatccaa catggaggct tcatcgacaa
     1801 tcagcacgtc gaacggcagc ggacggatat ggtcgaacgc cgcctgcatt ttgggcgggc
     1861 tcagcttaag cagtcggtgg acggtttgcc cttccagttt gagcaaatgg cggcggacgg
     1921 cctccggcgc gtcaaaaccg ttgattgaac ggtgcagtgc gcgcgccata tgtgccgccg
     1981 ctttgcccgt cggtgcggca agcgcgatat ggggaagatt ttcgttttca ccgcaaatca
     2041 gtgccagcag tttggcaacc gttgtcgttt tgcccgttcc cggccctccg gtaatcacca
     2101 taaaaaactg caacagtgcc aaggcggccg catcgcgctg tccttcgctt cccgcgcctt
     2161 gaaaccattt tgcgaggttt tgccgcgcgc ctgccgcgtc gggggcggac gtgccggctg
     2221 ccgccaagcg ttttatttcg gcagccaaat cgtattccaa ctgccacatc ctgcccaaaa
     2281 acagccttct gccttccaaa atcaaaggcg cggcggatgt tccgaccacg ggtgcgagtg
     2341 ccgacagcgc gtcagcctcg tccccgctca aacggataaa cgaatgaccg ttttgcaatg
     2401 cctgaaacag gcgttcggta cagtttgcaa gcacttcgtt gcccgaaccc gcatagcgtt
     2461 ccaaaaaacg gattgccgcc cttgccgccg cttgggcaaa ttcatctgtc tgcagttcca
     2521 tcgtattcct tgtcgaaatg ctgtctgaag gcacggggct tcagacggtg cgtgttgttt
     2581 cggctgttta ggcgtttgcg ccctgtctgg ggtgcaggct gccgtctttc atgaccatca
     2641 cgcgctcgaa gcggccggcg agttcgtcgt cgtgcgttac gaccaccagc cccgttccca
     2701 attccgtttt cagttccagc atcatatcca aaacattcct tgcgtttgcc cggtcgaggt
     2761 taccggtcgg ttcgtcggca agcaggcatt tgggttgcgt aaccaaggcg cgcgcaatgg
     2821 cggcacgctg gcgttcgccg ccggacagtt cgcccgcacg gtgcgtcgaa cggtgtttca
     2881 gtccgacctt gtcgagcatc gccattgccg tttctaccgc ctctttacgg ctttttttgc
     2941 cgatcagaag cggcatcatc acgttttcca gtgccgaaaa ttcaggcaga agatgatgga
     3001 actggtacac gaaaccgaga tggcggttgc gcaaatcgcc caaacgccgc tggtttaagg
     3061 cacgcaaatc ctcgcccatc agcagcaccc tgccttcaga cggcatatcc agcccgccca
     3121 aaatatgcag cagcgtcgat ttgccgctgc ccgaagagcc gatgatgccg gtgctttccc
     3181 ccgtgcggat ttccaaatcc aagccgtaca gcaccggaac gtccaaaccg ccgtcacggt
     3241 agcgtttgcc cacgccttcg catttcaaaa tcaaatcact cataacgcaa agcctccgcc
     3301 ggttgggttt ttgacgcgcg ccagctcggg tacagtgtcg ccacgaaaga cagccccaag
     3361 gaaatgcagg caatcagggc aacgtcgccc atatcgacat cactgggcag gtagtcgata
     3421 aaataaacct gcgaattgat gaggtggaca ccgagcaggt tttcaaaaaa cgccacgacc
     3481 ctgccgacgt tccaacccca aagcacgccg cagaccacac ccgccagcgt gccgaaaaag
     3541 cctgaaaacg cgccctgcac cataaaaatc ttcatcacgc cggcagggga aagacccaaa
     3601 gtccgcaaaa tcgcaatgtc cgcctgcttt tccgtaaccg ccatcaccaa ggaagagaca
     3661 aggttgaacg ccgccacggc gataatcagc gtcaggataa tgaacatcat ccgtttttcc
     3721 agttcgaccg cttcaaaata gctgcggttg ctgtacgtcc aatcgcgcac ccaaaccgtg
     3781 tccctttgcg cctccggaat cagcgttgcc gtcaaggcgg gggcgttttg cggatcggca
     3841 agcttcagcc gcagccccgc aacttcctta tccaagcggt acagtacgcg cgcgtcttgg
     3901 atatgcgtca tcgccaatga gttgtccact tcgtaaacac ccgtcttgac caggccgacc
     3961 acggtaaact gcttcaggcg cggcacgact ccggcagggg taacgttgcc ctccggcgta
     4021 attaccgtaa ccttgccgcc gacttccgcc cccaaagcct ccgccaaacc gacgccgagg
     4081 ataatgtcaa actcgcccgg aatcaggtct tcaaacttgc ctgccggcat tttgtcgccg
     4141 tattccacca ctttgcgctc ttcagacggc aaaatgccgc gtatctgaac gcccctgatt
     4201 tcgcccgcgt ttgccagcaa tgcctgattg gaaacatagg gtgcggcagc caaaatgcct
     4261 ttgcggtttt cggcaaaccg aagcaggttg cgccaatccg tatccgtatt gtcgatatag
     4321 ccgatttcgg cgtgcggcgc gacattcagg agctgcccgc gtatttcttt ctgaaagccg
     4381 ttcataaccg acaagacgac aatcagcgcg gttacgccca aggcgattcc ggcaatcgaa
     4441 accatcgtga taaacgacat aaagccgttg cgctttttcg ccctgagata cctcaagcct
     4501 atccaagcct ctagagaaaa cataacgcta ccttaaaaat gtctgcaaac gtgccgcccc
     4561 ggacggcggt ttgggggagg cggcaaaagt ttattgtacc gtaaaacccc ggcagcgtcc
     4621 gaacggcagg ctgtgtaaat aaagacgcgg tatgtggcaa attcggaaaa acaggacgga
     4681 aaacttgcac aacgcgccga actaccctat ccttctcttg aaacaaaacc ttttctttaa
     4741 ggaaaacaat gaatatcagg aaaatctccg ctttgtgtgc tgttgccgtt tttactgttt
     4801 cgacagccta tgccaaagaa atcaaaatcg atgccaacaa cacgccttat tccgaagccg
     4861 acgcgcaaaa gctggcggca acggcagtcg gtatgggcgt taaggaacct gtcagcctga
     4921 acggcggcag cggcagcatt accgtttccg gcagcagcgc ggcgcagtgc gtctttacgg
     4981 tcggcagcgg gggcactttg cagattcaag ggctcaactg caagtaaacc gcccgaaaaa
     5041 atgccgtctg aaggcttcag acggcatttt gcattggcgg cgttacgccc cgccttcttt
     5101 aatcagacgc cgttcgtaca ccgcctgcgc cagcgttccc gcatcgacat attccaattc
     5161 gccgcccaat gggatgccct gcgacagcct gctgaccttg taaggcaggt ttttgaaaaa
     5221 ctcggacagg acatacgctg tggcattgcc ttctgcggta aaggcggtcg cgataatgat
     5281 ttcttcgatt tccccgccgt ccagccgttg cgccagcctg tccaatgcga tggcggatac
     5341 gtccattccc aatgccgtat tgatttgccc catcaggacg aaatacagcc cgtcgtggca
     5401 gtttgccgct tctatattcg acacgtcggc aggcatatgc accaccatca gccgccgccc
     5461 gtcgcgtgtt tcatcggcac aaatatcgca caatccgcct tcgcaaaatg tattgcacct
     5521 tgcgcaatgg cgaacctgcc tcaatgccgt ctgtaaggca tccaccagct cttcagcctc
     5581 tttgcgcttt tgctgcaaca gatggtacgc catccgctgt gccgatttcg gcccgacgtt
     5641 gggcaatact ttcagcgcac cgatcaggcg ttggaatgca tcctgttttt tggaattcat
     5701 catactccgc catatgggaa aacggtcgga atattccgac cgttatgttg tcaacaaaag
     5761 tgtcaattac tgaccatcgc cgttgtcaac cgattgtgct cctttagtct gtttgatttt
     5821 tccgttgaaa tagcggatca gcaggtcgaa agtattggca gactgctgtt gcgccaaagc
     5881 ctgtttcgca ggaggaagct gtgcggcaat atcctccgga ggcgtgactg cctgcacctc
     5941 gacaatcacg ggtgccggca gaccggtcag tctgacatag gcgggtttgc cgtttgccgg
     6001 ttttgctttc agcagttccg cataagcctc gggcggcatg gactgccttg cctgctgcgc
     6061 gcccaaaacg gacacttccg accatttcac gtcaactgcc ttgccgccgt tcagttgggt
     6121 aagcacttct tttgccttgt tttcggcaag tttggcggct tcggtacgga tataggcctg
     6181 acgcaccgca tctttggctt cttcaaacag taggtttttt tcttcgcgga cttctttggc
     6241 gcggacgacc cacgcggttt cgctgttgat ggtcagcact tcggaattgt gttttttctt
     6301 caatacgtcg tcgctgaata cggcattgat taggttttcg ggcatgccgg acatttgtgc
     6361 gtcctgcctg ctcagccaag tttcttgggt ttccactttc aaaccgctgt ttttggcggc
     6421 ttcggcaagc gaggagggat gattgaacgc atcgtcgccc agcttttctt ttgccttgtt
     6481 gaagtcggca accgcctttt tcattttcaa ttcgttttcg acggcggctt tttcctgctc
     6541 gaaagaaggt ttggcttcat gtgccggcaa acgcgccacg cgctcttcaa acgcattttt
     6601 cacttccgtt tcactgacgg tctgcttgtc tgcaaaattc ttcagattca aggcgacata
     6661 ttccaatttg accgcctgcg gcagcagata gtcttttttg ttcgcattat aaaatttctg
     6721 caaatcggct tcagacgctt tgacttgggc gatgaactcg tcggggttga aagtgtgcga
     6781 acggatggtg cggttgacct gcgtcagcct gatcagctgt tccgcctgcg cgtcgccgac
     6841 caatacgccg ttttggacga ggcttaccaa attctgcaag gcaaactgat cgcggatttc
     6901 ttcgacaaac tggtcttcag acatatggcg ttgcgacagg tattgactca aaagcgcgtg
     6961 actgaatttg ccgtttgcgt cgtggaaatt gggatcgtcc acaatcatct gcttgatttg
     7021 ttcggaagaa accgaaatgc ccatcagctt cgcgccctgt ttcaggtagg cgcgttgcag
     7081 cagggattgg aacaccgcgt cgcgccaagg gctgccgccg tccgcctgct cgttctgcat
     7141 ggcgttgttg attgagtgct cgctgatttt ttcgtcgccc acttggacga tgtagtcggc
     7201 gcccggatgg gaaaccgtgc tgacgccgaa gccgacaaaa gttaatgcaa tcaggcctaa
     7261 taagacttgg gcgggtgttc tgtatttttc gatggaatgg aacatatttt cagattggga
     7321 atgggaaatt caagtcgggt attgtaacgg tttttatccc tgtctgcacg gggcttgccg
     7381 gttgaagatg ccgtcgtagg tttcttcgct gaagccgacg taaaccctgc tgccgcactc
     7441 caatacggga cgcttgatca ggctcggcat ttcggacatc agtttgacgg cctccgccgt
     7501 cgaggacagg gctttttgct gtgtttcggc atcgagtttg cgccagcttg tcccgcgttt
     7561 gttgaacagg gttgccaaag gcacttgttc cagccacgag cagatttccg cttcagacgg
     7621 catctgtttt ttgaaatccc gaaacccaaa ctccaagccg tatccggcaa gcctgttttt
     7681 ggcttttttg actgtgtcgc aatttggaat gccgtgaagg attatcattt ggaaaccttt
     7741 tgcctgaaat aataaaaccg atattttact ataagtgtct gaaaatttgc ccgtctgttt
     7801 cagacggcgg ggcggttatg ttacaatccg aaaattcgaa aaatttaatc tcttgttcaa
     7861 taaaggtttt acccataatg atttctacca acggcattac catgcagttc ggcgcgaagc
     7921 cgctgtttga aaacgtatcc gtaaaattcg gcgaaggcaa ccgctacggc ttgatcggcg
     7981 cgaacggttc gggcaaatcc accttcatga aaatcctcgg cggcgatttg gaacagaccg
     8041 ccggcgaagt ggcgattgaa aacggcgtgc gtttgggtaa attgcgccaa gaccagtttg
     8101 cctacgaaga catgcgcgtg ctggacgtgg tgatgatggg gcataccgaa atgtgggcgg
     8161 cgatgaccga gcgcgatgcg atttacgcca atcccgaagc caccgaagac gactacatga
     8221 aagccgccga actggaagcc aagttcgccg aatacgacgg ctacaccgcc gaagcgcgcg
     8281 ccgccgaatt attaagcggc gtgggcattt ccgaagattt gcacaatgcg aaaatggcgg
     8341 aagtcgcccc gggcttcaaa ctgcgcgtat tgctggcgca ggcgctgttc tccaagccgg
     8401 atgtattgct cttggacgaa ccgaccaaca acttggacat caataccatc cgctggctgg
     8461 aaggcgtgtt gaaccaatac gactccacca tgatcatcat ctcgcacgac cgccacttct
     8521 tgaacgaagt ttgcacccac atggcggatt tggactacaa caccatcact atttatccgg
     8581 gcaactacga cgactatatg ctcgcttccg cccaatcgcg tgagcgcgcc ctgaaagaca
     8641 atgccaaagc caaagagaaa ctgcaagagc tgcaagaatt cgttgcccgt ttttccgcca
     8701 ataaatccaa agcccgtcag gcaaccagcc gtctgagaca ggccgacaaa atcaaatcgg
     8761 aaatggtcga agtcaaacct tctacccgtc aaaacccgta tatccgtttt gaagccgatg
     8821 aaaaagccaa gctgcaccgt caggctgtgg aagttgaaaa actggccaaa cgctttgaaa
     8881 cccagttgtt tagaaacctc aacttcatcc ttgaagcagg ccaacgcctc gccatcatcg
     8941 gcccgaacgg cgcaggtaaa tctaccttgc tgaaactctt ggccggcgcg tacaaccccg
     9001 aatattcaga cggcctgttg ccggacgaag gcagcatcaa atgggcggaa aaagccagtg
     9061 tcggctacta tccgcaagac catgaaaacg actttgacgt cgatatggac ttgagcgaat
     9121 ggatgcgcca atggggtcgg gaaggcgacg acgaacaagt catccgaggc actttggggc
     9181 gtttgctttt cggcagcaac gacgtggtaa aaaaagtgaa agttctctcc ggcggcgaaa
     9241 aaggccgtat gctttacggc aaactgttgc tgttgaaacc caatgtcttg gtcatggacg
     9301 aaccgaccaa ccatatggac atggaaagca tcgaatcgct gaacatggca ctggacaaat
     9361 acaacggcac gctgattttc gtctcccacg accgtcagtt cgtttcctcc ctggcaaccc
     9421 aaatcatcga actggacggc aaaggcggat atgaacacta cttgggcgat tacgaaagct
     9481 atctcgagaa aaaaggcgta gcataagcgc acccctccgg ttgaaacaat gccgtctgaa
     9541 gccgcttcag acggcattgt tgataacttt aaaataggaa gcatatgcag acttacctcg
     9601 tcggcggcgc cgtccgcgat tatcttttgg gcctgcccgt caaagaccgc gattgggtgg
     9661 ttgtcggcgc ggacgcgcaa accatgttgg cgcaaggttt ccagccggtc ggcaaagatt
     9721 ttcctgtatt cctccatccc aaaacgcacg aagaatacgc cctagcccgc accgaacgca
     9781 aaaccgccaa gggttacgcc ggtttcagtt tccacgccga caaagacgtt acgctggaac
     9841 aggacttgat gcgccgcgac ctgaccatca acgcgatggc gcaagatgcg gacggcaaga
     9901 ttatcgaccc tttcggcggg caacgggatt tggcggcagg cattttgcgc cacgtctcgc
     9961 ccgccttcgc cgaagatccc gtccgcatcc ttcgtgccgc ccgctttgcc gcgcgttacg
    10021 gctttgaaat cgccgaagaa accataaagc tgatgcggca gatggtggaa aacgacgaag
    10081 cggacgcatt ggttgccgaa cgcgtctggc aggagttggc gaaaggtttg atggaaaaaa
    10141 atccgcgcaa aatgattgaa atgttgcgcg aatgcggcgt gctcaaagtc ttgctgcccg
    10201 aagtcgacgc cctcttcggc gtgccgcaac gcgccgacta ccatcccgaa atcgacagcg
    10261 gcatccatac cctgatgacg ctgcaacgcg ccgccgatat gggtttgagc ctgcccgaac
    10321 gctatgccgc cctgctgcac gacttgggca aagccaaaac accgcccgac atcctgccgc
    10381 gccaccacgg acacgacatc aacggcgtag aacccgtgcg cgaagtcaat caacggctgc
    10441 gcgcgccgag gcagtgtgcc gagcttgccg aattggtttg ccgttggcac attattttcc
    10501 accaagtcgg acagcttaaa agccaaacca ttctgaacgt attgaaaaaa accgatgcct
    10561 tccgccgtcc cgagcgtttt cagacggcat tgaacgtctg cattgccgac acgcaaggcc
    10621 gtctgaaccg agaacacacg ccctaccccc agcgcgcgca ctggctcgcc ctgctcgaag
    10681 ccgccaatca ggcggattcg ggcaaaatcg ccgccgaatg ccgcgcgcag ggaaaagcgc
    10741 actttatcgc cgaacaaatc gaccgggcgc ggctggcgca aatcgccccg ctgcaaaaag
    10801 cgtttcgggg cgcgtaggaa aaagaaaacg ccaaacgcgg catcttttga ggttcgcccg
    10861 cattgccgaa acagcgtcgg agaaagggat ggatgacatc ggtttattcg gctgcctttt
    10921 aatattccct tgatgcaggc ctgattagtc ggacaaaaat accttttgtt caacggaacc
    10981 gatttctatc cggacggaaa cagccggctt tccccttgca aacggatgga atcaagcggg
    11041 tattcaaaca cagccgttta tttttattcc gccgccaagt tatgggatag ggtttgcgtg
    11101 tttcgggcag gcaaaccgcg caaccttaga cgcagtccga agttttgaag gcggcatccg
    11161 ggccgggttt tgaaacagcc gccgccatat ccgctataat ccatccttca gccattccgc
    11221 ccccgacata aaatcatgac cctgaaaacc gatttattgc ctaaaatcaa caacgaagat
    11281 tatcaacgcc tcatcctcaa acatagcgcg gaattcagcg gcggagaaac ccgcctgttg
    11341 aacgaaatcc tcgaaaaatt caatttcgac gttgttcagg cgcaggcatt ggcgcaggcg
    11401 gtaatgcagc aagttcgctt cgatcccaac gcctaccaca tcgacagcga cgacgaagac
    11461 accaccggca tctgccccca ctgcatcaac ccgcctatgc cgcccctgcg cgactatctc
    11521 gtttggcgcg aaacacgcgg ataaaacgct tttgaccgtt atcttttcaa tgccgtctga
    11581 aacgccgccg accgttcgga cggcataccc gacaaaggga acactatgct gcaaaccgac
    11641 aacctgaccg ccgcgcaacc gcaacgcatc gttgccgccc aaaccgcctc cgcacaggaa
    11701 gaactgctcg aacgcgccct ccgccccaaa acgctggacg actacatcgg gcagcataaa
    11761 gccaaagagc agctcgccat cttcatccaa gccgccaaaa aacgcggcga agcactcgac
    11821 cacgtcctgc ttttcggccc gcccggactg ggcaaaacca cccttgccca catcatcgcc
    11881 aaagagttgg gcgtaaattt gcgccaaacc agcggccccg tcctcgaacg cgccggcgac
    11941 ctcgccgccc ttttgaccaa ccttgatccg cacgacgtat tgtttatcga cgaaatccac
    12001 cggctaagcc ccgtcgtcga ggaaatcctc tatcccgcgc tcgaagacta ccggctcgac
    12061 attatgatag gcgaaggacc cgccgcacgt tccgtcaaaa tcgacctgcc gcccttcacc
    12121 ctcgtcggcg cgaccacccg cgccggtatg ctgaccaacc cgttgcgcga ccgcttcggc
    12181 atcgtctccc gcctcgagtt ttacgaaaac cgcgacctta ccaccatcgt cagccgttcg
    12241 gcacaactgt tgcagctcga tatggacgaa gaaggcgcga tggaagtcgc caaacgcagc
    12301 cgcggcacgc cccgcatcgc caaccgcctg ttgcgccgcg tgcgcgattt cgccgacgtg
    12361 aaaaacaacg gcgtaatcga tgccgccgtc gccgatgccg ctttaagtat gctggacgtg
    12421 gacgcgcagg ggctggacgt gatggacagg aaattcctcg aagccgtttt gcacaaattc
    12481 ggcggcggcc ccgtcggttt ggacaacgtt gccgccgcca tcggcgaatc tacggacacc
    12541 atcgaagacg ttatcgaacc ctacctcatc caacaaggct ttttgcaacg caccccgcgc
    12601 ggcaggatgg cgaccgaacg cgcctacctg catttcgggc tgcccgtcga aaaataaacc
    12661 atgccgtctg aaaccgaacc gggtttcaga cggcatggtt atcagacgtt tgcaccggca
    12721 ccggtttcat cacttaacag aaaccttttg tccggcagga cagattctcc ccgatgaaaa
    12781 taactgtttc cctggcaaac ggttgaaacc cgtctggctg ccggttgaaa aataacgcaa
    12841 tgctgtctga aacagagcta attttcagac ggcatttcta tttcaatcat tggctcaagg
    12901 ttcagcctgc cgctttttcc agttccgccc tcatcgcagc gattaccgcc ttgtaatccg
    12961 gtttgccgaa aatcgccgaa ccggcaacaa aggtatccgc accggctcgg gcaacggcgg
    13021 caatattgtc agttttgatg ccgccgtcca cttcaatggc aatacgtctg ccgcttttcc
    13081 cttcatagcg gtcaagcatg gcgcgaacct gtctgatttt ttccaaagtg tgcggaatga
    13141 agctctgacc gccgaacccg gggttgaccg acatcagcaa aaccatatcc agcctgtcca
    13201 acacgttttc caacacatat acgggcgttg ccggattcaa caccagcccc gcctgacagc
    13261 ccatgtcccg aatcaggctc aagctgcggt cgatatggcg gctcgcttcg ggatggaaag
    13321 tgataatcga tgctcctgct ttggcaaacg attgaattaa atcgtcaacg ggttcgacca
    13381 tcagatgcac atcgatcggc acgcttgcat aaggcttcaa cgccgcgcag accataggtc
    13441 cgaaggtcag gttcggcaca taatggttgt ccatcacgtc aaaatggatc agatccgcac
    13501 ccgccgcaat gacatttgcc acctcttctc cgaggcgggc aaagtctgcc gacaaaatac
    13561 tgggtgcgat acggtaggcg gtcatatttt ttccttcaat gcctttatgg gcggactcaa
    13621 cgcgggaaag cctcgaaaca gcattattaa caaaagttaa ctgccataat accatctttc
    13681 acacggcaat caagtatatt gtccgaaata tccggattaa aggaaaagcc gtgccgctgc
    13741 ctgctccctg ccgttttgcc aaacctgccg cctctttatt taagtatggc tttgctttcc
    13801 tgccagcttt cccacgccgc cacggcttat atccccccga acgattttca accgaactgc
    13861 gacatacgcc ggctcgggct gacacagggt cagcacaatg agctgcgtaa aatccgcgcc
    13921 gccttcaaaa tggcgggcga cagggcgcgt ttgaaggtta tgcattccga acacagccgc
    13981 cgccgctctg tcgtcgaaat catttcttcg gatgttttta atcggaacga ggcgcgcgat
    14041 tatgtcgaaa gccgctacca ctccagcatg gattttgcgg tggacgaatt ggaaatccaa
    14101 caccgcttct tccatattct cacaccgcaa cagcagcaaa tgtggctttc ttcctgcctc
    14161 aaataatccc cgaaacactc acggcgcacg ttgctccggc agcctgcccg cccagtcgca
    14221 ggcaaactgc caagcggaac gtcccgagcg gttgccccgc atctgcgccc actgcaacgc
    14281 cgccgtccgg gcggcttcgt catatggcac atcaaaatct tccaaccagc ttcgcactgc
    14341 cgccagataa tcgttttgat cgaacggata aaaactgagc cacaatccga atcggtcgga
    14401 caaagatact ttttcttcca cggcctcttt ttgatggatt tctccgcgca cgcctgtcgt
    14461 acctgcattt tcatccaaat attcgggcat cagatgccgt ctgttggaag tcgcgtacac
    14521 catcacgttg gcgcaacgtt gggacagacc gccatccaat gccgttttca atgccttata
    14581 ggtttcgtcg ccgctttcaa atgacaaatc gtcgcaaaac acaatgaatt tttccgggcg
    14641 ttccttcaaa agtgccaaca gatacggcag gccgatcaaa tcgcttttat cgacttcgat
    14701 caggcgcaat cccttatccg catattcgtg cagcagggct ttgaccagcg aggatttgcc
    14761 tgttccgcgc gcgccgctca tcaatacgtt attcgcaggt ctgccggcaa taaattgttc
    14821 ggtattacgc accagcaatt cggtctgcct gccgactccg gcaagccgcg acaaagggaa
    14881 aacgtgcgga tcgggcaagt gttccaaaaa accttttttg cccgcactct gccagcggaa
    14941 ggcaagcgcg ttccaatccg tatgcccggg ttcgggcgga agcacggcat ccaaacgccg
    15001 caaaacggca taggctttat cgaggaattc gttcaattcc atctctacct cactttgcat
    15061 atctttgcgc catcagccgt tcgacggtgt cgacgattgc ctgcgtattc ggatcgattt
    15121 cgatgttgat cctgtctccg gcctttctgc tgccgaacag cgtccgttcc aaagtttcgg
    15181 gaatcagatg gacattgaaa cggctgtctt cgactttgcc tatggtcagg ctgcaaccgt
    15241 ccaagccgac gaaccctttg gtcaggatat agggtttgag ttcgtgcggg agcgcaaacc
    15301 aaaccgtgcg gttgaacccg tcccgttcga tttcgacaat gggcacggtt gccataatgt
    15361 gtccgctcat gacgtgtccg ccgatttcgt cgccgaaacg tgccgcccgt tcgatgttga
    15421 cgcaatcgcc ttccttcagc agccccaaat tggtttttgc caaagtttct gccattaaat
    15481 cgaagctgac gcggtttcct tcgatttcag taatcgtcag gcagcagccg ttattggcga
    15541 ccgatgcgcc gtgttgcagg ttttctgccg cctcttgcgg aagctcgacg acataagtct
    15601 gaaacgcctc cgacgggcgg tggattgccg tcagttttcc caatccttga acaatgcctg
    15661 taaacataat cctgtttccc tgtgtcggta aaaatggtgc aaattgtagc atttccccgc
    15721 gaaaaatgcc gtctgaaact ccttcagacg gcattgtgcc tccggttcgg gcaaaaaccg
    15781 cccggtacgc cttgaccttt cctttccgcg ccggtcggcg gtcttgcact tatccctcct
    15841 gcaaatcggt ttgcgtgttc aagtcggcaa aatgcccgtc aaactcgaat ctgaccggcc
    15901 gcgccctttg ctgctgcaac cagcttctta atgttttcat acccgaaaac agataaggaa
    15961 tcgcgctttg cagaatttgc ggacggatat acataatgtt gtagtgcatc gttaccggcg
    16021 tttccacata aaacgcattg cacaacggtg tgcgtttgga gacgctttca aagcgcgcga
    16081 ccaaatcgtc cggcagatac ggcatatcgc aaggtacaat cagcagccaa tcggccgccg
    16141 ccaactgcaa atcgttggct gcggtacaca atgccgaaag cgggccgaaa tgctgccact
    16201 gccgggcatc cggaaaaaca tgcgggctgc ggcgggcgta ttcttccaaa ttccggttgg
    16261 cactgatgac gatatggctg acctgcggcc tgattttacc gataacgcgg tcaatcagcg
    16321 gtctgccttc caacagtgcc agccctttgt cttccccgcc catacggtcg gccaggcctc
    16381 ctgccaaaat caatgcgaac gtttttaatg cgggcgggct tttgggaaag tttgaggttt
    16441 tcatagtttc agtctgccgt ttccgatatt ttagaagcgc gtttgaaaac ggcgtcgtat
    16501 aaattcatgt tatttgaatt ttatcataac gtgatttaac actgaaagca ttgaggctta
    16561 agttttcctt aacctgtcct ttctgagcag ttgtttctaa ttccaaagaa tgatattgtt
    16621 tgcaccgttt aaaacgactt tcctccgaat atgatactgc caacccgatt ttcagacggc
    16681 atcccccttt ccctgcgcct gaaactcctg accggcttgt gggtcggttt ggcggcactg
    16741 tctgtcgttt taacgctgct gctttctttc cgcctggaaa atgccgcctc ggtcatcgaa
    16801 gaggcgggca atctgaagat gcaggcatac cggcttgcct atatggcggg cgaaggctcg
    16861 ccccgcgcac aaatcgacaa tcagattgcc gaatttgaaa aaagtttaaa acgcatttcc
    16921 caaagcgatg ccatccatcc gctgattccc tccgacaatc cccttgccta cgatttgata
    16981 cagtccatgc tgattatcga ctggcaggcc aacatcctcc ccccgttgca ggcataccgc
    17041 cgccccacac aaatcgagct ttaccgcttt gccggcaata tcgaactgtt tttgcaggcg
    17101 ttggaaaatg ccggcgaaaa aaacacttgg tggctcaggc ggtttcaatg ggtcattatg
    17161 ctgatgacgc tggtgtcgtc cgtgctgatg cttttttggc accagatttg ggttatccgt
    17221 ccgctgcagg cgttaaggga aggtgcggaa cgcatcggtc agcggcattt cgacatccct
    17281 gttcccgaag acggtacgcc cgaattcaaa caggtcgggc ggtgtttcaa ccaaatggcg
    17341 ctcaggctga agactttata cgatgatttg gaaggacagg ttgccgaaca aacccacaac
    17401 cttgaaaagc aaaaccgcaa cctgaccctg ctgtaccgga ccacgcgcga cctgcatcaa
    17461 tcctatacgc cgcgacaggc ggcggaagaa tttttgaacc acatcctgcc cgccgtcggc
    17521 gcgcaatccg gcaacatctg cctggaaaac ggttccgaca cagacatttc cgtccatacg
    17581 gccgaacacg gcaaaaagcc ccctttggaa aaataccatg acgaaacctt ccccatcgaa
    17641 tatcaaaacg agaaactggg catgctttcg ctcggctttt cagacggcac ttccctcacc
    17701 ggagacgacc gcacgctgct tcaaaccctg attcggcaat tgggcgtatc gctcgccggg
    17761 gcgaaacagg aggaagaaaa acgtctgctt gccgtattgc aggaacgcag cctgattgca
    17821 caggggctgc acgacagcat cgcgcaggca ttaaccttcc tgaacctgca ggtacagatg
    17881 ctggaaaccg cctttgccga aaacaaacgg gaggaagccg cagaaaacat cggctttatc
    17941 aaaacaggcg tgcaggaatg ttatgaagat gtccgcgaac tgctgctcaa tttccgtacc
    18001 aaaatcagca ataaagaatt tcccgaagct gttgccgacc tgttcgcgcg cttcacgcaa
    18061 caaaccggga taacggtcga aaccgtttgg gaaaacggtt cgttcctgcc tacacaggac
    18121 gagcagctcc aaatgatttt catcctgcaa gaaagcctgt ccaacatccg caaacacgcc
    18181 cgcgccaccc atgtaaaatt caccctttcc gaatacggcg gacgctttac catgaccatc
    18241 caagacaacg gacaaggttt cgacacggag aaaataggag aacctacggg cagccatgtc
    18301 ggactgcaca tcatgcagga gcgtgccaaa cgcatccgtg ccgttttaga aatccgttcc
    18361 caagcacaac agggaaccac cgtctcattg acgggcgcac ccaaagaaag cctaccatga
    18421 ccatcaaaat catcctgata gacgaccaca ccctcttccg cagcggcatc aaagcccttt
    18481 tgtcgcgcca acacggtttt gaagtcatcg gcgaagccgc agacggactc tcgggcatca
    18541 aaatgatcag tcggctgcaa cccgatgtcg tcctgctcga tttggatatg ccaggcatga
    18601 acgggcgcga ggccttgtcc caaatcatca gcatcaatcc gcagcaggca gtcattatgc
    18661 tgaccgtttc cgaagacagc gacgaccttg ccgaatgtat gcgcatcggc gcgcgcggct
    18721 acctgctgaa aaacatcaac gccgattttc ttctcgaaag catacgcaaa gccgccgaag
    18781 gcgataatgt attctcgccc gagatgaccg ccaaactcgt caaaagcctg atttcccccc
    18841 aacctgccca aaggacgcag gcactctcct cacttacccc tcgtgaactg gaaatcttgg
    18901 gctatctcgc cgcaggacac agcaacaaaa tcatcgcccg ccacctcgat cttgccgaat
    18961 ccaccgtcaa agtccacgtt caaaacctgc tccgcaaact caacctcagc agccgggtgc
    19021 aggccgccgt ttacgccatc cggcacaacg tcccccaacc tgtgccggaa tagacgttca
    19081 gacggcatcg ggtcaggaaa aaagcaatgc gcccctttga cggggtgcaa tatataaggg
    19141 acggcatccg gtgtgccgtc cctttaagta cgccattacc gccgtaaccc ggacggaatg
    19201 gcttaggcag tttatttcca agaatatttc acacccacgg tgccttggta gcctttatgt
    19261 ctgttgcttc cgcatcctgc cgataattgc cttgcctgtc ccgagaaagg gtttgatttt
    19321 cgccacggcg ttggtggagc gtatccagca tcgcatagcc tgattccaag ttttgacgtg
    19381 gaacgagtgc gtaggccggt gcgcttggcg tgatgatggt tttatcttga ttcggcgtgg
    19441 ttaaagtcca gaagtattct gtcgcgcccg cctcatcttt gtgtgaaacc aattgcaatt
    19501 cccccgcccc tgtggttttg gcagttccgc taaaagtatc gcgcattgtg taggtatgtt
    19561 tagcgtcttc gatatttaat ttaccggttt ccgccccctt gtcttgtccc aaaaccttaa
    19621 caacggcggc actgcgtttg tagcggtcgg aaagttcgcc gatcgagccg tcgataatat
    19681 tttctttgcc atctttaccc actgaaatga ccgttgtttt tcctgaagca tcgcctgtga
    19741 tttccagtaa atcagattga gaatttcctc cttgatcatc acccggcgag ttccattctg
    19801 tattgacttt taacacaccg tctttaccga cataatttcc ttcaatggtg agtttgtctg
    19861 cataggattg attggcaagc gtaatgatgc cgccgttggt gaatgttcct ttttcaaata
    19921 cagaagttgt acccgataaa gaaatacctg tattagatag ggttagcgtg ccgcctgata
    19981 ataatgtagt cccttcgggt gttgttaatg atgtgtcttt ttttaggtga aaagtagctt
    20041 ttgttagttt tatggttcca atatcttctg atttgaattc cattgcgcca tttgtaattt
    20101 ttagcacagc attggtaata gggaggggga agcgcattgt aaatgatttt tctgttccat
    20161 ctggattgat taatgtacca gatgcgccaa agatctctcc ttcagggata gaaacagttc
    20221 catcagaaat tgatggttta tttgcgcttt tatcactgtg tttatgaatt aatgtaattg
    20281 tggctgtact agattatccc taaattccac accgatcccg caggattttt agctgccggg
    20341 acggtgtgcc g
//
LOCUS       DAWXHA010000026        20116 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.026, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000026 DAWXHA010000000
VERSION     DAWXHA010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20116
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.026"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            318..1370
                     /locus_tag="AABD07_000729"
     CDS             318..1370
                     /locus_tag="AABD07_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355304.1"
                     /translation="MRQYLPYSVRWCFFINPGAIILHRQIFLELMLPAAYGGFLTTAL
                     LDRTGFSGNLKPAATLMAVLLLVAAVLLPFLPQLAAFFVAAYWLVLLLFCAWLIWLDR
                     NTDNFALLMLLAAFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSVLLGTETLK
                     ECRLKDPVFIPNVIYKNIAITLLLHAAAELWLPAQTAGFTALAVGFILLAKLRELHHH
                     ELLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMTGGVMMVWLTA
                     GLWHSGFTKLDYPKLCRIAVSILFASAVSRAVLMNVNPIFFITVPEILTAAVFMLYLL
                     TFVPIFRANAFTDDPE"
     gene            complement(1417..3606)
                     /locus_tag="AABD07_000730"
     CDS             complement(1417..3606)
                     /locus_tag="AABD07_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HFB2355305.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSEPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDAARILSVQTVFVEEKPLSQSWRDLLAFTSRYYHYPIGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQANAQA
                     AKLIEDWAEQGWIETTEAAKPVLRPYRGQASHSEFVLNTDQQKASDEIQTALGRFRSF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SRMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPLPDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPVVLGSATPSLESWHKAQSGAYRLLQLTERAHASAQLPQVDIL
                     NIGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEESLRALLPKAAVV
                     RVDRDSTAHKNDWADLYRRIANDEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSRFGAAPMLMVRLA
                     ERERAQVFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            3746..4546
                     /locus_tag="AABD07_000731"
     CDS             3746..4546
                     /locus_tag="AABD07_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HFB2355306.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAESAVKTESAVKAES
                     AGKSVAASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVG
                     ELINIDTRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRL
                     EHEFEKMTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSI
                     CDNPVAETTSLGEQFGFNGTPTLVFPNGRTQSGYSPMPQLEEIIRKNQ"
     gene            complement(4648..6582)
                     /locus_tag="AABD07_000732"
     CDS             complement(4648..6582)
                     /locus_tag="AABD07_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003683017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter permease/ATP-binding
                     protein MacB"
                     /protein_id="HFB2355307.1"
                     /translation="MSLIECKNINRCFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGMGGKERSARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIRRLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIQEKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHGTEDFFMNNSDSIRQ
                     MVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICIIGGLVGVGLSAAVSLVFNHFVTDFPMDISAASVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(6648..7826)
                     /gene="macA"
                     /locus_tag="AABD07_000733"
     CDS             complement(6648..7826)
                     /gene="macA"
                     /locus_tag="AABD07_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HFB2355308.1"
                     /translation="MAKMMKWSAVAAVAAAAVWGGWHYLKPEPQASYITETVRRGGIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDMEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAEL
                     KALIRQSKISINTAESDLGYTRITATMDGTVVAIPVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLLIPSLTVKNRGGKAFVRV
                     LGADGKAVEREIRTGMKDSMNTEVKSGLKEGDKVVISEITAAEQQESGERVMGGPPRR
                     "
     gene            8052..8441
                     /locus_tag="AABD07_000734"
     CDS             8052..8441
                     /locus_tag="AABD07_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFB2355309.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLIAYPSYKTYIRRARLSEVK
                     STLLVNAQNLERYYRQKGTFEKYDSTKLKQNKYFKITLIKASPDHFTLQAAPDTATNE
                     GETCTVTLNDGGTIAASGTNQSCPGFD"
     gene            8715..9761
                     /gene="adhP"
                     /locus_tag="AABD07_000735"
     CDS             8715..9761
                     /gene="adhP"
                     /locus_tag="AABD07_000735"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HFB2355310.1"
                     /translation="MKMQAVVVNKNVAGDVEVVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SGVRPGQWIAIYGAGGLGNLGVQYAKKVFGTHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAVGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(10062..13547)
                     /gene="smc"
                     /locus_tag="AABD07_000736"
     CDS             complement(10062..13547)
                     /gene="smc"
                     /locus_tag="AABD07_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HFB2355311.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNNEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQNLHQRIERDKQAAQAQLQRIRQE
                     QQQIRVQLEENELQVEEKQTELAEWAMQVAEHEERLPELEEVQATLNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATDHAAAPQLWQHITAPAEWQHALSVILAERLHARSVPNSFVPPAPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQSDLGTHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLAPGLSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRTAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIATLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIARLEQQTLDWQERRQELALAYETEFQNDEQHIKLDELT
                     ETVHTLDEEYIAVQEKLAQIQEQGREQYARVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDVLEALAKESAKVLNSSIGSLTRQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAIALLEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCKLVKEMSVQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            13857..15032
                     /locus_tag="AABD07_000737"
                     /pseudo
     CDS             13857..15032
                     /locus_tag="AABD07_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712522.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            15241..15963
                     /gene="lpxH"
                     /locus_tag="AABD07_000738"
     CDS             15241..15963
                     /gene="lpxH"
                     /locus_tag="AABD07_000738"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HFB2355312.1"
                     /translation="MRPSYFISDLHLSEKHPELTELLLRFLRSAAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGRDFCRQAGMTLLPDY
                     SVLDLFGSNTLICHGDTLCTDDKAYLRFRRIVHCRRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPPEEC"
     gene            16232..17818
                     /locus_tag="AABD07_000739"
     CDS             16232..17818
                     /locus_tag="AABD07_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HFB2355313.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYAALAMVNEEFPSLVAGAVGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYAVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(17984..18187)
                     /locus_tag="AABD07_000740"
     CDS             complement(17984..18187)
                     /locus_tag="AABD07_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HFB2355314.1"
                     /translation="MDNLNPQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLGEGESG
                     SVACPYCGTRYRLDGKMPHHYYA"
     gene            18303..18800
                     /locus_tag="AABD07_000741"
     CDS             18303..18800
                     /locus_tag="AABD07_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HFB2355315.1"
                     /translation="MTALTLPEDIRQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGETIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHILSNRAAFA
                     HIGQA"
     gene            18882..20072
                     /locus_tag="AABD07_000742"
     CDS             18882..20072
                     /locus_tag="AABD07_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HFB2355316.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PIVKAVKEAEKRLLESETTKNYLTIDGVADYNEQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHCLDW
                     DGMIEDLNQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     STQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDNNIDYLCES
                     IVKV"
BASE COUNT         4336 a         5751 c         5320 g         4709 t
ORIGIN      
        1 ctgacaaacc ttgcggttcg tttccctctc cctaaccctc tcccacagga gaggggttca
       61 ggttgctgaa aatcagaggg cgaaggattg gggatcaaat ggaaggtaaa acctgaaaat
      121 gttcgggttt gacagcccga ttccctctcc ccgtgggaga gggctaggga gagggcaagc
      181 aagccgcagg cttgcctctt tggcgaaaaa tacaaccctg tccgcccaat aaatccatac
      241 ccgaaagcat cttcatacag aatcaagcca agcgatgaat aaatttttta cccaccctat
      301 gcgcccgttt ttcgtcggtg cggcagtact tgccatactc ggtgcgttgg tgttttttca
      361 tcaaccccgg cgctatcatc ctgcaccgcc aaattttctt ggaacttatg ctgccggctg
      421 catacggcgg ttttttgact accgctttgt tggaccggac gggtttttca ggcaacctga
      481 aacctgccgc tactttgatg gcggtgttgt tgcttgttgc ggctgtttta ttgccgtttt
      541 taccgcaact tgccgcattt ttcgtcgccg cctattggct ggtgttgctg ctgttctgcg
      601 cctggctgat ttggctcgac cgcaacaccg acaacttcgc tctgttgatg ttacttgccg
      661 catttaccgt ttttcagacg gcctatgccg tcagcggcga tttgaactta ctgcgcgcgc
      721 aagtgcattt gaatatggcg gcggtcatgt tcgtatccgt ccgcgtcagc gtccttttgg
      781 gcacggaaac cctgaaagaa tgccgtctga aagaccccgt attcatcccc aacgttatct
      841 ataaaaacat cgccatcacc ctgctgctgc acgccgccgc cgaactttgg ctgcccgcgc
      901 aaaccgccgg ttttactgcg cttgccgtcg gcttcatcct gctcgccaag ctgcgcgaac
      961 tgcaccatca cgaactctta cgcaaacact acgtccgcac ttattacctg ctccagctct
     1021 ttgccgccgc aggttatctg tggacaggcg cggcgaaact gcaaaacctg cccgcctccg
     1081 cgcccctgca cctgattacc ctcggcggca tgacgggtgg cgtgatgatg gtgtggctga
     1141 ctgccggact gtggcacagc ggctttacca aactcgacta cccgaaactc tgccgcatcg
     1201 ccgtctccat ccttttcgcc tccgccgttt cgcgcgctgt tttaatgaac gtgaatccga
     1261 tattcttcat caccgttccc gagattctga ccgccgccgt gttcatgctt tacctgctga
     1321 cgttcgtacc gatttttcga gcgaacgcgt ttacagacga tccggaataa aaatgccgtc
     1381 tgaaacggtt ttcagacggc atcggattgc caatgatcaa gcctcctgcg gatcgacatc
     1441 caccgaccat cggattttgc cgtcgcggtt ctgctgcaac acctgcaccc acaaactcac
     1501 ggcgcggtgc aaatcttgtc gggatgttga ttcgaggaaa acttgcgcac gttcgcgttc
     1561 ggcaaggcgc accatcagca tcggggcggc accgaaccgg gagacgcttt cgggcaagag
     1621 cggggcgagg gtttctttgg cggcgttgag aaattccatc gcatcggcaa cacgcggcgc
     1681 atcggcacgg acggccgtct gaaaaccgaa aggcggcatg gcgaacattt gccgttcgtt
     1741 caattcgttt tcggcaaaca cggcgtagtc ctgcgctttg acggcggcga agacagggtg
     1801 ttcgggcagt tgggtctgta tcagcacctt gccgggtttg tcggcgcgcc ccgccctgcc
     1861 ggacacttgc atcagctcgg caaacagcct ttccggcgca cggaaatccg cgctgtacag
     1921 gctgccgtcg gcgttcaaca cgataacgag gttgagccgc gcgaaatcat ggcctttggc
     1981 aagcatctgc gtgccgacca gaatgtcgat ttcgtcgttg gcgatgcggc ggtacaaatc
     2041 tgcccagtcg tttttgtgcg ccgtactgtc cctatcgacg cggacgacgg ctgccttggg
     2101 cagcaaggcg cgcaggcttt cttcgacgcg ctgcgtaccg tgtccgacgg cggtcaggtc
     2161 ttggttgccg cagtcgggac atttgaacgg gatgggttcg cggtggtcgc agtggtggca
     2221 gcgcagttgg cgggcgcgtt ggtgcagcac cattttggcg gagcagttcg ggcagccgaa
     2281 ggtatggccg cagtcgccgc aaaacagcgc aggcgcgaag ccgcgccggt taaggtacac
     2341 cagcgacata ccgcccgctt caaagttctg tttcaaaagc tgcaaggctt gcggtgagaa
     2401 gccgttatcg agtttcagac gacctatgtt gaggatgtcc acttgtggca gttgcgcgga
     2461 agcatgggcg cgttcggtca gttgcagcag gcggtacgcg ccgctttgcg ccttgtgcca
     2521 actctccaag ctgggcgtgg cactgcccaa cacgacggga cagccgccct gcttcgcccg
     2581 ccacaccgcc aaatcgcggg cgtggtagcg caattcgttg tcttgtttga acgagccgtc
     2641 gtgttcctca tcgaccacaa tcagcccgac atcaggcaaa ggcgtaaaca ccgccagccg
     2701 cgtgccgatc accagcttcg cctgccccaa catcgcgcgc agataatcct gcgtgcgcct
     2761 gcctgccgcc atccggctgt gcaacacggc ggtcggcacg tcggcaaaac ggttttccac
     2821 ccgctttaaa agctgcggcg tgaggttgat ttcgggcaac agaaacaaca cctgtcgccc
     2881 ctgcgccaac actttcgcca tcgcatcgaa atacacctcg gtcttgccgc tgccggtaat
     2941 gccgtacagc agaaacgacc ggaagcgtcc caatgccgtc tgaatttcat cggaagcctt
     3001 ctgctggtcg gtatttaata caaattcaga gtgcgaagcc tgcccgcggt acggccttaa
     3061 aacaggtttc gccgcttccg tcgtttcaat ccagccctgc tccgcccaat cctcaatcaa
     3121 tttcgccgcc tgcgcgtttg cctgtttcaa cgccgccatc gtcatttcgc ccgacagcag
     3181 cgcgtcccac aaagccgctt ttttgttgaa ccgagccggc ggcggcgttt gcgccctgcc
     3241 cgcttcgttc aaagcataaa acaacggcgg ctgcggcatt tccaccgcgc gcgtttcctt
     3301 caaaccctgc ggcaatgcgg caaatacagc ctgcccaatc ggatagtggt aataacgcga
     3361 cgtaaacgcc aacaaatcac gccagctttg agacagcggc ttttcttcca caaagaccgt
     3421 ctgaacgctc aaaatccgcg ccgcatccat atcgggcgca atatccgttt cccacaccat
     3481 cccgacaaca gttttattgc gaaaaggcac aagcacccgc gttcccggag gaagcggctc
     3541 ggaatgcgaa taagtcaaaa ggccgtctga aagcggcacg tttacagcga tgcgatggta
     3601 gatcatacag gcaggcaaat catttttttg cgtattttaa cagccggaag ctattttcag
     3661 acgataaatt gagcctcggc gcaatgcagg cgcaacagag gtttgataca atgccacttt
     3721 tccaacacgc tcaatcatct ttgatatgaa aaccaagtta atcaaaatct tgaccccctt
     3781 taccgtcctg ccgctgctgg cttgcgggca aacgcccgtt tccaatgcca acgccgaatc
     3841 cgccgtcaaa accgaatccg ccgtcaaagc cgaatccgcc ggcaaatccg ttgccgcttc
     3901 tttgaaagcg cgtttggaaa aaacctattc cgcccaagat ttgaaagtgt tgagcgtcag
     3961 cgaaacaccg gtcaaaggca tttacgaagt cgtcgtcagc ggcaggcaga ttatctacac
     4021 cgatgccgaa ggcggctata tgttcgtcgg cgaactcatc aacatcgaca cgcgcaaaaa
     4081 cctgaccgaa gaacgcgccg ccgatttgaa caaaatcgac ttcgcctccc tgcctttgga
     4141 caaagccatc aaagaagtac gcggcaacgg caagctgaaa gtcgccgtct tctccgaccc
     4201 cgattgtccg ttctgcaaac gcttggaaca tgagtttgaa aaaatgaccg acgtgacggt
     4261 ttacagcttt atgatgccca ttgccggcct gcacccagat gccgcgcgca aggcgcaaat
     4321 cttatggtgt cagcccgacc gtgccaaagc gtggacggat tggatgcgta aaggcaaatt
     4381 cccggtcggc ggcagcatct gcgacaatcc cgtcgcggaa accacttcct tgggcgaaca
     4441 gttcggcttc aacggcacgc cgaccctcgt cttccccaac gggcgcaccc aaagcggcta
     4501 cagcccgatg ccccaactgg aggaaatcat ccgcaaaaat caataatcca tccgcaaaac
     4561 aaaaggcttg aaaccgtgtt ccaagccttt ttcaaatgcc gtctgaagcc tgtcgcggca
     4621 gcttcagacg gcatctttgt tccaacctca atcctgcgcc aatgcgtcta tcggattgag
     4681 tttggctgct ttattggcag gcataaagcc gaacgcgatg ccgattccgg tcgaacaggc
     4741 gaccgcgccg atgacggatg ccgccgaaat gtccatcggg aaatcggtta caaaatgatt
     4801 gaacacgagg ctgacggcgg cggacaaacc tacgccgacc aagcctccga tgatgcagat
     4861 taacaccgcc tcaatcaaaa actgctgcaa aatattgccg cgccgcgcgc cgattgccat
     4921 ccgtatgccg atttctttgg tgcgctcggt aacggacacc agcataatgt tcatcacgcc
     4981 gatgccgccg actaccaatg aaatcagggc gatggaggaa atcagcagct tcatcgtacc
     5041 ggtggtgctt tcgaccatct gcctgatgct gtcgctgttg ttcataaaga agtcttccgt
     5101 gccgtgccgt gctttgagca gctcggccag ccctttttcg gcaacccggg tattggcatt
     5161 gtctttgatt ttgacggtga tggagttggt gtggctctcg cctgtgattt ggtgcatcac
     5221 cgtcgtatag ggcgaccaaa gcatcagcac gtcggaattg ccgaaagcgt tttcgtcttt
     5281 tttcatcacg ccgatgacgg tcaaggggcg tttcctgaac aaaatggttt tacccaacgg
     5341 atccgagtcc gcaaagagtt tgtctttgac attttggtcg atgacgacga cttgcgcgtc
     5401 ttctttcaca tcgttctcat caaacagccg ccccgtttcc agcttcagcc cgcgcacgtc
     5461 gaaatattgt tcgcccacgc cgtacaaaga agcggtcagg tcggtattgc ggtaggtcag
     5521 cgtgccgccg ctcgaagtca tgggcgtggc ggaagcaacg tagctttgtt tggcgatgat
     5581 ttttgcgtcg tctatggtca gggttttgat tttgccgctg cgcctgtcgc cgaagccgcg
     5641 cccggggaag atgctgatgg tgttcgtccc catcgaactg atgtcttcga ggattttttt
     5701 ctgcgaaccg ttgcccaatg cgacgacgga gacaaccgaa gcgataccga tgatgatgcc
     5761 gagcatggtc agaagcgaac gcattttgtg cgccaatact gcttgcaccg acattctgaa
     5821 ggcttcgaca aactggtcgt aataaaacga ccacgaggct ttttcctgaa tcctcccgac
     5881 attgcttgcg gggatttcgg gatttttcga ggtgtcggaa atgatttcgc cgtcccggat
     5941 ttcgatgacg cggttggcgt tggcggcaat gccggggtcg tgcgtgacca taatgacggt
     6001 atgcccggct tcgtgcagcc tgcggatgat ttccatcaca tttttgccgc tggcggtatc
     6061 gagtgcgccg gtcggctcgt cggcgaagat gatttctccg ccgttcatca gggcgcgggc
     6121 gatggagacg cgctgctgct gtccgcccga gagttcgccg ggcttgttgc cctctttact
     6181 tgccaaaccc aaatcctgca agagtttgtc cgcccgcgcg gaacgctctt tgccgcccat
     6241 acccatatac acggctggca gcgcgacgtt gtcccttgcg gtcagcgagc ttaagaggtt
     6301 gtagcgttgg aagatgaaac cgaagcgttc gcggcgcaat gccgccagtt cgtcaggctg
     6361 cattttggca gtttcgatgc cgtcgattcg gtacgaaccg gaaccggcgg tatccaaaca
     6421 accgagtatg ttcatcagcg tggacttgcc cgaaccggac tgcccgatga tggcgacaaa
     6481 atcacccttc tctatcgaca gactgatgtc tttcaaaata tggacgcggt tctcgccgct
     6541 gccgaagcag cggttgatgt ttttacattc gatcaagctc ataatattcc gtaaatcaat
     6601 aacaaatgcc gtctgaaacc gtttccgtgt tcagacggca tattcgttta tcggcgcggc
     6661 gggccgccca tgacgcgttc gccgctttcc tgttgctcgg cggcggttat ttcggagatg
     6721 accactttgt ccccctcttt caaaccgctt ttcacttcgg tattcatact gtctttcata
     6781 ccggttcgga tttcgcgttc cactgccttg ccgtccgcac ccaacacgcg tacgaacgcc
     6841 ttgccgccgc gatttttcac ggtcagcgac ggaataagca acacattttt cacaccgtcg
     6901 atttcaaccg tattctgcgt cgtcatcccc gtggcgagtt tgccgtccgg attcggcaca
     6961 aacgaacggg cataataata gaccgcattg gaagccgtat ccgtactgct gttgtagccg
     7021 cccgacgaca tcgtggtcag cccggggtcg acgctgtcga gcttcgcctt aatcggcgta
     7081 tccggttcgg acaaaatcgt aaacgaaata tcctgccccg ccttcacctt ggtaatatcg
     7141 ccctcggcaa tctgcatttt gttcaacatc atatccagat tcgccaattg gacaatcgtc
     7201 ggcgtagact gcgccgcgtt cacagtctgc ccctcttcca cgggaatcgc caccaccgtg
     7261 ccgtccatcg tcgcggtaat gcgcgtgtag cccaaatccg actcggcggt attgatggaa
     7321 attttgctct gtctgattaa agccttcaac tcggcaacat tggctttggc ggcggcaagc
     7381 gcatcctgcg cgctttccaa atcttcttta gaggtcgcat catccttcca caacgccgcc
     7441 tgacgcttat atttcttctc cgcgctgccc aatgcaatct gtgccgacac cagcttcgcc
     7501 tgatacgttt ccaatttgga tttttccata tcgagcgtgt tggtctgcgt ggtcgaattg
     7561 atttccgcaa tcaaatcgcc ctttttgacc tgttgcccga gtttgacata aagcttttta
     7621 atctgccccg aagcctgcgc gccgaccgat accaggttgg acggcgaaat ctcgcccgtc
     7681 gcggaaaccg tccggctgat gccgccgcgc ctgaccgttt ccgtaatata agaagcctgc
     7741 ggctcgggct tcagataatg ccatccgccc caaaccgctg ccgccgcgac tgccgcaaca
     7801 gccgaccatt tcatcatttt cgccatattt tcaattctct gtatgcgtca atcccataaa
     7861 ccggaagcgg attctaccgc aagtccctgc cccatccaag gcggcaaacc gccgacaata
     7921 aaaataacca tttgttttaa atggcttata caatctgctt tcccgaaaat ttcaatccgt
     7981 ttacatattc cgccatttcc gatacggcgt tataatgccg cccacaaaca accaaatgga
     8041 aacacattgc tatgaaaaac gttcaaaaag gctttacgct gctcgagctg atgattgccg
     8101 tcgccatcct cggcatcctg acgctcatcg cctacccttc ctataaaacc tacatccggc
     8161 gcgcccgcct gtcggaggtc aaatccaccc tgctggtgaa cgcgcaaaac ttggagcgtt
     8221 actaccgcca aaaagggacg tttgaaaaat acgactcaac caaactgaaa caaaacaaat
     8281 atttcaagat taccttaatc aaagccagcc ccgaccactt cacccttcag gccgctcccg
     8341 atacggcgac caacgaaggc gaaacctgca ccgttacgct caacgacggc ggtaccattg
     8401 ccgcttccgg tacaaaccaa tcctgccccg gcttcgacta atcctccgcc gaagccccca
     8461 aacccgtaaa aatgccgtcc ggacacagct tcagacggca tttttacggg tttgcccctc
     8521 cgttttttca aacttgaaac ctgccgcccc cgcatccggc cgccgtccaa tgccgcgcct
     8581 ccccaactgt tataatataa catatatttt tcaacaacat accatttgac cctcaagatg
     8641 cggaagcgta tgcttaccct tatatcggac aacattccgt ttacaggttt tttaccttga
     8701 aaaggagcgc aatcatgaaa atgcaggcag ttgttgtgaa taaaaatgta gcgggcgatg
     8761 tggaagtagt cgaacgcgag gttcgcccgt tggaatacgg cgaggcgttg gtcgaagtcg
     8821 aatattgcgg cgtgtgccac accgacctgc acgttgcggc aggcgactac ggcgaaaaac
     8881 cgggccgcgt gctgggacac gagggcatcg gtttggttaa agaagttgcc gacggtgtga
     8941 aaaatctgaa agtcggcgac cgcgtcagca tcgcctggct gttccaaagc tgcggctctt
     9001 gcgaatactg caataccggc cgcgaaaccc tgtgccgttc cgtattgaac gcgggctaca
     9061 ccgccgacgg cggtatggcg acccactgca tcgtgagtgc cgattacgcg gtcaaagtcc
     9121 ctgaaggttt ggatcctgcg caagcttcca gcattacttg tgccggcgtg accacttata
     9181 aagccattaa agtttccggc gttcgtcctg gtcaatggat tgcgatttac ggcgcgggcg
     9241 gcttgggcaa cttgggtgtc caatacgcga aaaaagtatt cggcacgcac gttgtcgcca
     9301 tcgacatcaa cgacgacaag ctggcatttg ccaaagaaac cggcgcggat ttggttgtca
     9361 acgccgccaa agaggacgct gccaaagtga ttcaggaaaa aaccggcggc gcacacgctg
     9421 cggtcgtaac cgccgtatct gctgccgcat tcaactctgc cgtgaattgc gtccgcgcgg
     9481 gcggacgtgt ggttgccgtc ggactgccgc cggaatcgat ggatttgtcc atcccgcgtt
     9541 tggttttgga cggcatcgaa gtggtcggct ctttggtcgg cacgcgcaaa gatttggaag
     9601 aagccttcca attcggcgcg gaaggtttgg ttgtgccgaa agtccaactg cgtgctttgg
     9661 atgaagcacc cgccattttc caagaaatgc gcgaaggcaa aatcaccggc cgtatggtga
     9721 tcgatatgaa aaaagaatgc ggctgcggtc atcaccactg atttgacgtg gcggtacaca
     9781 tcgaaatgcc gtctgaacgc tgttcagacg gcatttttta tggatttgga tttgatttta
     9841 atctgttctg tttgaaatac cgtctgaaaa cccttatcgc aacacgtcat tatagtggat
     9901 taacaaaaat caggacaagg cggcgagccg cagacagtac aaatagtacg gcaaggcgag
     9961 ccaacgctgt accgatttaa atttaattca ctataccgtc tgaaaacccg tatcgcaaca
    10021 cttcattaaa aacggcaaga ttcagccgtt ctgcaacccg ttcaaacggc ttccgccatt
    10081 tccaacgcct gcttgatgtc tacggcgacg acgcgcgaca cgcctttttc ctgcatggtt
    10141 acgccgacca gctgctccgc catttccatg gtcaggcggt tgtgggagat gtagaggaac
    10201 tgggtttgca ccgacatttc tttgaccagc ttgcagaaac gcgaggtgtt ggcatcgtcc
    10261 agcggggcat cgacttcgtc cagaaggcag aagggggcgg ggttgaggct gaacagggcg
    10321 aacacgaggc tcatggcggt gagggctttt tcgccgccgg agaggaggtg gatggtgctg
    10381 tttttcttgc cgggcggacg cgccatgatg gacacgccgg cggtcaggag gtcgtcgcct
    10441 atcattttga gggtggcttc gccgccgccg aacagggtcg ggaagaaggt ttggactttg
    10501 ccgttgacgg cgtcgaaagt ttctttgaaa cgcgctttgg ttttgtcgtc gatttgggcg
    10561 atggcttctt ccaaaagcgc gatggcggcc tgcacgtctt cgctctggct gcggtagtag
    10621 ccgtcgcgtt cgcgcgcttc ttcgagttct tgcagggcgg cgaggttgac ggcgccgagg
    10681 gcttcgattt gccgggtaag gctgccgatg ctgctgttca atactttcgc cgattctttc
    10741 gccaacgctt cgagcacgtc cagatcggca gcgcgttcgg tcaggttttg atggtagcgt
    10801 ttggcgttga tcagggcctc ctgctgctgc aacagggcgg tttgggtggc ggcctgaagc
    10861 tgcggcagct tggtttgcag ggtttgtacg cgggcgtatt gctccctgcc ctgttcctga
    10921 atctgcgcga gtttttcctg cacggcgatg tattcttcgt ccagcgtgtg tacggtttcg
    10981 gtcaactcgt cgagcttgat gtgctgctcg tcgttttgga actcggtttc ataggcgagg
    11041 gcaagctctt gccggcgttc ctgccagtcc agggtttgct gttcgagccg ggcgatttgc
    11101 tgccggtagt tttgtttttg ctggttgagt ttgtggacgg cgacttcggc aagcccgtat
    11161 tggcggttgg cttccaacag ggcaagctgc gcctgtttca gacggccttg ctgctcttgg
    11221 cggctgtgcg cggtggtttg ctgctggtgt tcgagttcgg cggcggcttc ctgcaaagta
    11281 gcgatgtcgt ctgaaagccc gtcggacgtg tgttgcaaca cggtctgctc ttccgccaac
    11341 tgtgccagtt cgcgctcgat gtgttcgcgg cggatttgcc cttggttggt gcgcgccaga
    11401 agttcggcgg tgcgttgctg cgcttggctg tattggcgcg tgtgttgctg ttgctgctgc
    11461 atcagatttt tgtgctgcac ttcggacgag cgcacggcag cctccgcctg tttgaacgcg
    11521 gcttcggcgg cggaaagtcc gggggcgagg ttttccagtt cggacgcgat gccgtcgagg
    11581 cgcgcttttt gggcaatcag gctttcctgc gcgggcttgg catagagcag gacgctgact
    11641 ttatcgacct gatggccttc gggtgtgagc cagatttgat gcgtgcccaa atcgctttga
    11701 tgcgcgaggg cgtagctcaa atcgggcgcg cacaatacgc cgtcgagcca gtggtgcaat
    11761 gccgtctgaa acggcggctg cgcttggatt tggttcagca atgcctgtac gggcagggat
    11821 tttttgatgc cgccggagag gccgtctgaa agccatgccg cctgcccctg cggcaaaggt
    11881 gcgggcggta cgaaactatt cggcacgcta cgggcgtgca ggcgttcggc aaggatgacg
    11941 gacagggcgt gctgccactc ggcgggcgcg gtgatgtgtt gccacagttg cggcgcggcg
    12001 gcgtggtcgg ttgcctgcca aaagtcggcg gcttcctgct gttgcgacag gatttgcgac
    12061 aacgcctgct gctgcgcctg caaggtaatg tgttgctgct tcaggctttg gaagcggttt
    12121 gaggccgtct gaaacgcctc gcgggcggcg tgcaaggctt cttcggcggc aatgatttgt
    12181 tcttcgtaat gctcttgccg gctttgcaac aaggcggcgg cttcctgagc ggcggcggtt
    12241 tcggcctcgt cgggcaggtt cagggcttgg ttttcctgct tcagacggcc tttgcgctct
    12301 tcgtgcttgg caacggtttg ttcggcatgg gcaagctgct gctgcttcaa cgccagttcg
    12361 cggcggatgc ggtttgcctc gtcctgctgg gtttggaagg cagcgttgag cgtggcttgg
    12421 acttcttcca attcgggcag acgctcttcg tgttcggcaa cctgcatcgc ccattccgcc
    12481 aattcggttt gcttttcttc gacctgcaac tcgttttcct caagctgcac gcggatttgc
    12541 tgctgctcct gccggatgcg ttgcaactgc gcctgcgccg cctgcttgtc gcgttcgatg
    12601 cgttggtgca ggttttgccg gtggcggatt tgttcttcca aacgggcaat ctgctcgcgc
    12661 aacacgccgc gtttgttgct caattcgtgt actgcctgct gctgcgactg ttcggcagtc
    12721 tgcaaggcgt gtacttcgtt atttaacgcc tgaacctgtg cggcggtttc atcctgctgc
    12781 gcctgcaaag attgatgctg cgcggtcgcc ttgtcggcgg cggcaagcga ttgctgccat
    12841 tgggcgtaat cgagcaaatc ctgttgttga ttcaactgcg cggtcaggga tttgtagcgt
    12901 tcggcggttt ccgcctgttt ttccagcttt tccacctgac gcgccaactc gttctgcaaa
    12961 tcgcccaaac gctgcaaatg ctcgcgcgtg tctttcagac ggccttccgt ctccttgcgg
    13021 cgttccttat atttggacac gcccgccgcc tcctcgatat aggcgcgcaa ctcctccggc
    13081 cgcgcttcga tgatgcgcga aatcatcccc tgctcaatga cggcataacc gcgcgcgccc
    13141 acgcccgtac ccaagaacaa atcggtaata tcgcggcggc gcacggtctg attgttgatg
    13201 aaataagtcg attccccctg acgcgtcagc tgccgcttga tgctcacctc ggcatactgc
    13261 ccccacgcgc cctgcaaact gtggtcgctg ttgtcaaata ccagctccac cgaagccctc
    13321 ggcgcaggac ggcgcgtcgc cgcaccgtta aaaatcacgt cctgcatact ctcgccgcga
    13381 agctgcttcg ccgaagcctc gcccaacacc cagcgcaccg cgtcaatcac attcgacttg
    13441 ccgcagccgt tcggcccgat aaccgcgaca agctgccccg gaacatgaat cgtggtcggg
    13501 tcggtaaaag atttgaagcc ggagagtttg atgtgggtca ggcgcataat ggtcggaaaa
    13561 aataaaaaag aagcgtattt taacggaaat cccgccgcac caccccatat cttgccggca
    13621 aaaccttacc gcatcccgcc ccggtgcggc aggattttgc acatcccggc catccgtatt
    13681 aaaatctttg cgtttcccac actttcctga caaatatacg gaggaggatt ccatgaaaac
    13741 aaaaacagtc aagcaagcaa gcaagcaaaa tagtctaacc cccctttctt taatcgctct
    13801 acttaatttc cacttctttt tatcctgttc gatcttttgc ggctgcacct caagaaataa
    13861 actattcgtt atcaggcggt aaagtttacg cagataagtt cagtatcgcc attggggttg
    13921 aggcaaaagc tcagggggat aataccaaac ttagcaacct caatcggcac atctgccgaa
    13981 gcaaatgcac ccggggcatt ggctttaagg ggaagttctg aagcatcgaa aaaatttagt
    14041 atagcagaag gctatctggc atctagtgat ggctatggtg caatagcgat tggttctgcc
    14101 gccaagataa agcaattgga aaaaggcaca ataaatcata ttgtgggaaa cgataataaa
    14161 ggtctttatg tcgatgcaga cggcaatgta acaaagataa ccgtaaggac tgagtcggaa
    14221 aaagatattc tctcaagata cggtcaaact tacggtgcgg tggcactagg gtttagatct
    14281 tcttcacata atctttttgc cagttcattt ggagcgtttt ctacagccac agctattgaa
    14341 agcttggcag tcggcgacag cagccaatca acgggctacc gcagtgctac ttttggcagt
    14401 cacagcaggg ctttggcaga agaaagtttg gcattaggtt atgaaactcg ggcaaatgct
    14461 tatggttccg ttgctttagg tgcagaatct gtggcgaatg aagaaaatac cgtatcagtg
    14521 ggttccgata cattgaaacg gaaaatcgtt aatgtcgccg atggcacgga agatttatga
    14581 tgcagtaaat gtccgccagt tgaaccgctt aagcaaacgt acaaaccgcg tcggcgcaag
    14641 tgctgcggcg ttggcttcgt taaaacctgc acaattaggc aaaaacgaca aattcgcctt
    14701 ttctttgggc tttggaagct ataaaaatgc ccaagcggtg gcaatggggg cggtgtttaa
    14761 gcccgctgaa aatgtgttgc ttaatgtggc gggcagtttt gccggaccgg gctttcggcg
    14821 cgggggtttc ttggaaattc ggcggcaaac cgacacctgc ggttgccgca caaaacgcgg
    14881 cgcatcctgc aaaagttttg caattgcggc aggaagtggc ggcgttgcgc gcccggcagg
    14941 cagaaaccga ccgcaaactg cacaaacagg ccgaaatgga aaacgagctg caacagttgc
    15001 gccgcgcgtt gtccgaattg aaaaaacatt gaagcaataa acgtaaggcg ggacggcggc
    15061 tctgcctttt tccgatgccg cacccgcgcg atgccgtctg aagccttcag acggcatttt
    15121 taacgcgccc gaaccccggt tccgccaatg cccgatgctt ggcgcggcat ttgccgtatt
    15181 gccccgccgc cgggcgcgtt ataatccgcc acgacatccg cccgatttgg aaacctgcct
    15241 atgcgaccct cctatttcat ttccgacctg catttgagcg aaaagcaccc cgaactgacc
    15301 gaactgctgc tgcgtttttt acgttctgcc gccgccgggc aggcgcgggc ggtttatatt
    15361 ttgggcgatt tgtttgattt ttgggtgggc gatgacgaag tttccgagtt gaatacttcg
    15421 gttgcgcggg aaatcaggaa attgtccgac aaaggcgttg ccgtgttctt tgtcaggggc
    15481 aaccgcgatt tcctaatcgg tcgggatttt tgccggcagg cgggtatgac gctgctgccg
    15541 gattactcgg ttttggactt gttcggcagc aacaccctga tttgccacgg cgacacattg
    15601 tgcaccgacg acaaggcata cctgcgtttc cgccgcatcg tgcattgcag gcggctgcaa
    15661 aaactgttcc tgatgctgcc cctgaagtgg cgcacgcgcc ttgccgccaa aatcaggcgt
    15721 gtcagcaaaa tggaaaaaca ggtcaagccc gccgatatta tggatgtcaa tgccgccttt
    15781 accgcgcggc aggttcgcgc ctttaacgcg gaaaggctga tacacggaca cacccaccgc
    15841 gagcatatcc atcacgaaaa cggctttacc cgcatcgttt tgggcgactg gcataacgac
    15901 tatgcttcaa tcctccgcgt ggacggggac ggcgcggtat tcgtgccgcc ggaagaatgc
    15961 tgaaaatgcc gtctgaagcc tttcgggcgg ctttttctac acgccccttt cccacactcc
    16021 ctccgccgca tcatcaccat ccttaacccg cattaatagc cattatcgat aaaatgcttg
    16081 accgattaca taagattacg taaagtgtgc aaacgcataa taattggtct taccaattta
    16141 tcttttaacc aaaatatcgg gtgtgcggga tttgaacgtc tttccaaacc tcgacgcgcc
    16201 ttatgatgca aatgcctaaa aaggattcgt tatggcactt ttcctcagca tattccccat
    16261 cgtcctgctg atttggctga tggtgaaaaa aaacagtatg ccttcctacg tcgcactgcc
    16321 gattaccgca gtgctgattt acgccatcaa acttttctac ttcggcgatg cgggaatgct
    16381 gctcaacgcc accgccgctt ccggcctcgt caaaacgctc acgccgatta ccgtgatttt
    16441 cggcgcgatt atgttcaacc gtatgatgga aaccacgggc tgcatcgatg tcatccgcaa
    16501 atggctggcg accatcagcc cgaaccccgt agcgcaactg atgattatcg gctgggcttt
    16561 tgcctttatg attgaaggcg catccggctt cggcacgcct gccgcgattg ccgcgccgat
    16621 tctgatgagc ttgggcttca atccgttgaa agtggcgatt ttcactttgg tgatgaattc
    16681 cgtgccggta tcgttcggcg cggtcggtac gccgacctgg ttcggtttcg caccgctgaa
    16741 cctgagtgcc gaagacatcc tcgccatcgg caggcagacc ggcgtgatgc acttcttcgc
    16801 aggtttcgtc atccctgtca tcggtttggg cttcatcgtg ccttggtctg aaatccgcaa
    16861 aaacttgggc ttcgtcgcca ttgccgtctt ctcctgcacc attccttatg ccgcattggc
    16921 gatggtcaac gaagaattcc cgtcgctcgt cgccggcgcg gtcggcctga tggtgtccgt
    16981 attcgccgcc aaccaaggct ggggcttgag caaagaccac gccaaagacc cgaatgccga
    17041 aaaagtgccg ttcgcccaag tcgccaaagc actcgcccct ttgggtatgc tgatcggcat
    17101 gctggtggtt acccgcatca aacagctcgg aatcaaaggc attttgacca gcaaagaaga
    17161 atggttcagc ttccaactgc cgtttgattt gtccaaaatt accgtcagcg actccctgac
    17221 gattaccttc ggcaatattt tcggacaaga tgtcagcgcg tcttaccaaa cgctgtacgt
    17281 cccggcttgg attccgttcg tgctgaccgt ttggatttgc atcctgctgt ataaaaccaa
    17341 attcaaagat gcctggacga tttatgccgt aaccttcaat caaaccaaaa aaccgctgct
    17401 tgccctgatg ggtgcgctga ttatggttca gctgatgctg gtcggcggcg acaattcgat
    17461 ggtgaaaatc atcggtaagg aatttgccgc aatggcgggc gaacactggg tttatttttc
    17521 gccgtatctg ggcgcgatcg gtgcgttctt ctccggctcc aacaccgtgt ccaacctgac
    17581 cttcggtccg attcagcagc aaatcgccct tgataccggc ctgtccgtga ccctgattct
    17641 ggcgttgcag tccgtcggcg gcgcgatggg caatatggtg tgcctcaaca acatcatcgc
    17701 cgtatgtacc gtattggacg tgaaaaattc cgaaggtgcg attatcaaga aaaccgttat
    17761 cccgatggcg atttacggcg tgattgccgt cgtcgcggca atgattttct tcctctaggc
    17821 gaaacgccgc catccatagc ggcagcacgc ggggaacgga aaccgccgct cgtccgggcg
    17881 gcgcgtcggg cagaatcccg gtgccggaac agcccgcccc gccaaacaaa tgccgtctga
    17941 aaccggaaaa ggcttcagac ggcattttta tcgccgtttg cattcaggcg tagtaatgat
    18001 gcggcatctt gccgtcaagg cggtagcgcg tgccgcaata cgggcaggca acgctgcccg
    18061 attctccttc gcccaaaggt aaaaacaccc tcggatgccc gttccactgc tcgttgtccg
    18121 gtcccgagca atacagcggc agattttccg gcaacacgga aatttcctgc ggattcagat
    18181 tgtccatttg attttccttt gcgtggttgg cgtgcgccca ttttacgcca tcggcaggct
    18241 aaaggatatt ttcggcgcaa agccgcaatc cgctataatc cccacttttc agacggcata
    18301 ccatgactgc gcttaccctt cctgaagaca tccgccaaca agaaccatcc gttctgctct
    18361 ataccctcgt ttccgcctac ctcgaacaca ccgcccaaac cggcgacgaa tccctctcct
    18421 gcctgtccga cgaccagcac acgctgaccg cattctgcta cctcgacagc caagtcgaag
    18481 aaggcggctt cgtacagctt atcgcctccg gctacggcga atacattttc cgcaacccgc
    18541 ttgccgacag cctgcgccgc tggaaaatca aagccgtgcc gaaagtcttg gacaaagcca
    18601 aagccctcta cgaacaacac ggcgaaacca tcgaaacgct cgccgacgga ggcgcagaca
    18661 tcgaatccct gcgcaaacag ttccccgact ttgaagaatg ggacggcgca tactacgaag
    18721 ccgccgaaca agacctgccc ctgcttgcag aacacatcct gtcaaaccgg gcggcattcg
    18781 cccatatcgg gcaggcgtga ttgcgtctgt ttccagcccg tgtaaaacag cgtaaaatcg
    18841 gcaaacccga attatcttcc gtccccatca aggagcaagc tatgttcttc aagcacatcg
    18901 aagccgcccc cgccgatccg attctcggtt tgggcgaagc gttcaaagcc gaaacccgcc
    18961 ccgaaaaagt caacctcggc atcggcgtgt acaaagacgc atccggcgcg acacccattg
    19021 tcaaagccgt caaagaggct gaaaaacgcc tgttggaaag cgaaaccacc aaaaattacc
    19081 tgaccatcga cggcgttgcc gactacaacg agcaaaccca aatcctgctg ttcggcaaag
    19141 accacgaaat catcgccagc cgccgcgcca aaacagcgca aagccttggc ggtacaggcg
    19201 cattgcgtat tgcggccgaa tttgccaaac gccagttgaa cgcgcaaacc atctggattt
    19261 ccaatccgac ctggccaaac cacaacgcca ttgccaaagc ggtcggtatc caagacaaac
    19321 cttatcgcta ctatgatgcc gccaaacact gcttggattg ggacggcatg attgaagatt
    19381 tgaaccaagc gcaaaaaggc gacatcgtcc tgctgcacgg ctgctgccac aaccctaccg
    19441 gtatcgaccc tacgcccgaa caatgggaaa ctttagcaaa actttctgcc gaaaaaggct
    19501 ggctgccgct gtttgacttt gcctaccaag gctttggcaa cggtttggaa gaagatgcct
    19561 atggcttgcg cgtgttcttg aaacacaata cagaattgct gattgccagc tcttattcca
    19621 aaaacttcgg catgtacaac gagcgcgtcg gcgcgttcac tttggtggcc gaagatgaag
    19681 aaacagcagc ccgcgcccac agccaagtca aaaccatcat ccgtaccttg tattccaacc
    19741 cggcttcaca tggtgcgaac accattgcac tggtgttgaa aaatgatgat ttgaaagcac
    19801 aatggattgc cgaactcgat gaaatgcgcg gccgcatcaa agccatgcgc caaaaatttg
    19861 tcgagttgct caaggccaaa ggttcaaccc aagactttga ttttattatt gaacaaaacg
    19921 gtatgttctc tttcagcggc ttgactcccg aacaagttga ccgtttgaaa aacgagtttg
    19981 ccatttatgc cgtccgttcc ggccgcatca acgtcgccgg cattaccgac aacaacatcg
    20041 attatctgtg tgaaagcatc gtgaaagtat agtcaattaa aatcaaaata ggacagtagt
    20101 gcatcgtcaa atcggg
//
LOCUS       DAWXHA010000027        19872 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.027, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000027 DAWXHA010000000
VERSION     DAWXHA010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19872
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.027"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            101..574
                     /locus_tag="AABD07_000743"
     CDS             101..574
                     /locus_tag="AABD07_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HFB2355317.1"
                     /translation="MTDFSVWEAAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLADMRDELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTGNFHAPEGACGSWTRLYALAKEMADDLNDHIHLENDILFARVLDS"
     gene            complement(645..1466)
                     /gene="nadE"
                     /locus_tag="AABD07_000744"
     CDS             complement(645..1466)
                     /gene="nadE"
                     /locus_tag="AABD07_000744"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HFB2355318.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAAQANAKGFVVGVSGGI
                     DSAVVSTLAARTGRTTLLLDMPIRQHPGQLERARRHIRNLQGQYANVSAQTANLTDTF
                     QTFEQTVGVHRTAFANQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKVEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRRREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            1663..3018
                     /locus_tag="AABD07_000745"
     CDS             1663..3018
                     /locus_tag="AABD07_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HFB2355319.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPVRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPAAVQGAGSGFQIAQAIKTASQRAECDVLIVCRGGGSIEDLRAFNE
                     EPVVRAIEACTIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRA
                     HTARFERQTQALQHCRPDVSVYRQDIVRLQTALPAAFSRLLARRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDGETDVRVSKEQGQQDLFDC
                     I"
     gene            3520..5061
                     /locus_tag="AABD07_000746"
     CDS             3520..5061
                     /locus_tag="AABD07_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HFB2355320.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLFYLALMMFGAFTIRVPADGWK
                     PEGYTVPKTQNKPVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSAGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIVGLLCNLAVKSVHEKHH
                     EKDIKTAARSGNPDDETAISDAYLVGEKVSGDGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(5120..6169)
                     /locus_tag="AABD07_000747"
     CDS             complement(5120..6169)
                     /locus_tag="AABD07_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HFB2355321.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKDETRKTAAQAY
                     GQKASDGIKLQNAPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTTEQMRSLTEEGVMLEDGLAKVERIYEQGGEGANKWY
                     NIVIKEGRNREVRRIFESQGLTVSRLVRVAFGPIGLPNRLKRGQFYELNPAEVANILK
                     WADMLLPGERRRKKA"
     gene            6390..7022
                     /gene="pdxH"
                     /locus_tag="AABD07_000748"
     CDS             6390..7022
                     /gene="pdxH"
                     /locus_tag="AABD07_000748"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HFB2355322.1"
                     /translation="MDLHNIREDYSKRELSEADCADNPIEQFERWLDEAVRAEVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLELNPFAAMTFFWPELE
                     RQVRVEGRVGRLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            complement(7152..8162)
                     /locus_tag="AABD07_000749"
     CDS             complement(7152..8162)
                     /locus_tag="AABD07_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HFB2355323.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLSAAARQNLNLPHSCKNGVCGQC
                     KAELASGDIQMGGHSEQALSEAEKAQGKILMCRTTAQSDININIPGCKADALPIRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILPATDTGYAP
                     IRSILLDLIRQNSSRAAHFYWGARHQDDLYALEEAQGLACRLKNTCFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8389..9819)
                     /gene="gatB"
                     /locus_tag="AABD07_000750"
     CDS             complement(8389..9819)
                     /gene="gatB"
                     /locus_tag="AABD07_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HFB2355324.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHASVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGGDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLDICDGNMAEGSFRIDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLDQAINYEAEAQIEILEDGGTVQQATMLFDPEKGETRVMRLKEDAHDYGYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRVQAAYFEEAAK
                     ESGQGKPTANWMNGELAATLNKEGMELADSPITAPRLAALVGKIADGTLSGKLAKKAF
                     EAMWAEPETSIAEIIEKHSLQQMTDTGAVEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKTSKGKANPAQVQELIKAKLA"
     gene            complement(9862..10794)
                     /locus_tag="AABD07_000751"
     CDS             complement(9862..10794)
                     /locus_tag="AABD07_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HFB2355325.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQDAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDVLC
                     QMEDCRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPSGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAALKLDGAIGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYE
                     MLDDMVTKMKDSLKTEARGISDGIQTEKPLRRTV"
     gene            complement(10791..12236)
                     /gene="gatA"
                     /locus_tag="AABD07_000752"
     CDS             complement(10791..12236)
                     /gene="gatA"
                     /locus_tag="AABD07_000752"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HFB2355326.1"
                     /translation="MTQYTLKQAGSLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFVSPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSFEREKEDYTRDLDKPLKGVKIGLPKEYFSEGNSTDVQTA
                     LQNTIDLLKAQGAEPVEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPSAAPKIGADTSPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            complement(12299..12589)
                     /gene="gatC"
                     /locus_tag="AABD07_000753"
     CDS             complement(12299..12589)
                     /gene="gatC"
                     /locus_tag="AABD07_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HFB2355327.1"
                     /translation="MALTLADVDKIARLSRLQLTAEEKEKSLQELNDIFTMVEQMQNI
                     NTDGIEPMAHPHEVALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE"
     gene            12739..13392
                     /locus_tag="AABD07_000754"
     CDS             12739..13392
                     /locus_tag="AABD07_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HFB2355328.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGALLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            13397..14740
                     /locus_tag="AABD07_000755"
     CDS             13397..14740
                     /locus_tag="AABD07_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HFB2355329.1"
                     /translation="MFHSVNVFTGETLYRRPDQDYAEFERRLADLKMHGRAFAQLGVT
                     ERAARLQKFAGRLEAEKERFAEMVCEEVGRCLHECRAEIVKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSRALFDLASDGIPLAGAWLDEADTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAVDRFIQLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKVPQGSGWFY
                     PATVLDRVNPACRVWREEVFGPVALILRAENEEHAICLANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(14789..15217)
                     /locus_tag="AABD07_000756"
     CDS             complement(14789..15217)
                     /locus_tag="AABD07_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFB2355330.1"
                     /translation="MNFALSVITFTLASFLPVPPAGTAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTLQTKPAVKPKPAVDTNADSAKENEKDIAEKNGQLEEEKKKIAETERQ
                     NKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(15563..16819)
                     /locus_tag="AABD07_000757"
     CDS             complement(15563..16819)
                     /locus_tag="AABD07_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HFB2355331.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFRKHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFFG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWSEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESPDAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQGEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERIGSEHDTRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVAKLLEQQH
                     SILDAASKLVKPQGCLVYATCSVLPEENELQIKRFLSEHPEFEPVNCAELLQNLKVDL
                     DTGKYLRLDSARHQTDGFFAAVLQRK"
     gene            complement(16855..17724)
                     /locus_tag="AABD07_000758"
     CDS             complement(16855..17724)
                     /locus_tag="AABD07_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HFB2355332.1"
                     /translation="MTDIRISMNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELS
                     VRELLGERGFRYLLALDADPAPLTDYLAQRAPFDHRLGIYAEELLAFWFTNAPHTKLH
                     AYNLTVFSDGQTLGAADFVVSLNQQPYHIELACKYYGGDQVQNLRGLNPKDTLTDKAA
                     KLVQQFQLVHTSQGKATLAAQDLPENPLPASIVRGIGFFPQGFHAFEPPLNPYGWRGI
                     YIQDWAEYGFERQEARYHLLDRMVYLAPARVAETETLNATEIRRIDQGLIAVLECRPD
                     GFWHEIERIMKAV"
     gene            complement(17765..18580)
                     /locus_tag="AABD07_000759"
     CDS             complement(17765..18580)
                     /locus_tag="AABD07_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HFB2355333.1"
                     /translation="MTALKPALPDYLGNIRIILTRTSHPANIGSAARAMKTMGLHRLT
                     IVTPNLMATPMTENPPVFNPDDVQSFALPEESFILASGAADVLHNAEIVATLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTDSPMTHLQQEDHAATHEQIKGMLAHME
                     SVMDDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            18824..19609
                     /locus_tag="AABD07_000760"
     CDS             18824..19609
                     /locus_tag="AABD07_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HFB2355334.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGFHGKATAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYSPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMSGEDAWLESGDIVAANPKVLAQMLKIISAHV"
BASE COUNT         3996 a         5001 c         5918 g         4957 t
ORIGIN      
        1 ctgtacagaa acgcgcgggc ggtgtatgct ccgtttaaat agattcttaa agtatgaatg
       61 ttcaaaacca aacccgaaac cctataaaag gaacactgca atgactgatt tttccgtttg
      121 ggaagctgct ccctttggcg caaccgttga tcatatcctg caacgctacc acaatgtcca
      181 ccgcgcacaa tttgaagaat tggtgccgct ggcgcagaaa gtggcccaag tccatgccga
      241 tacctttccg gcggaaattg ccgggctgct tgccgatatg cgggacgagc tgctgatgca
      301 tatgatgaag gaagagcgga tgctgtttcc gatgattaat cagggtgtcg gacgcggtgc
      361 ggcgatgccc atcagcgtga tgatgcacga acatgaagaa cacgaccgcg ccatcgcacg
      421 gctcaaagag ctgaccggta atttccacgc acccgaaggg gcttgcggaa gttggacgcg
      481 cctttacgcg ctggcaaaag aaatggcgga cgatttgaac gaccacattc atttggaaaa
      541 cgatattctg tttgcccgcg tactcgattc ttaagggata ggagtcggat atttcaatgc
      601 cgtctgaaat acggtttttc cgtttcagac ggcattttca tgtttcagcc cagcaattcg
      661 ggcggaatgc ggcacacagg aatcgggttg attttgtgct gcatcgcgcg gtgaagccgc
      721 gtatagattt ccagaacttc gcgccgccgt ccttcaaaat cttcgggttt gcgcgtgccg
      781 tacacgccca ttgcccactc cagttcggga tagcttgcgc ccatctgttc ctcgtcggtg
      841 cgttccgtat cccacaggcc gtcggtcggc ggggcttttt gaatcgcctc gtccacgccc
      901 aatgcttcgg caagccggta aacctgcgtt ttggtcaggt cggcaatcgg gctgatgtcc
      961 acgccgccgt cgccgtattt ggtaaaaaaa cccacgccga aatcttcaac cttattacct
     1021 gtccccgtaa ccagcagtcc gtgtatctgc ccgtagtagt acagggtcag catacgcagg
     1081 cggcttctgg cgttggcgag cgaaagcggc tgattggcaa atgccgtccg atgaacgccg
     1141 acggtttgct caaaggtttg gaaggtgtcg gtcagattgg ccgtttgcgc gcttacattg
     1201 gcatattgcc cttgcagatt gcggatgtgc cgccttgccc gctcgagctg gccggggtgt
     1261 tggcgtatcg gcatatccag aagcagcgtg gtgcggccgg tgcgggcggc gagcgtggag
     1321 acgacggcgg aatcgatgcc gccggaaacg cctacgacga acccttttgc atttgcctga
     1381 gcggcgtatt cgtccaacca tcggacaata tgtgtgataa ctgcctgcgt atccattttt
     1441 cctcctgtcg aaaatatccg catcatagcc tgccggcggt gcaatttgaa tagattgagg
     1501 gcgggttgat gaatattttt cccattcccc gcttaaaaaa gtcatatagg aaaaggctgg
     1561 cggcaagatg gcgcgtgtta taatattgtt gacaatttag acggcacgat gccgccttgg
     1621 gcttcaaaac atattcatat tttttattat ttgattgatt cgatgtctga tttttttcat
     1681 tctgacgtgt tgtccgtttc cgagttgaac gcatttgcca aaagtatttt ggaaaaccac
     1741 cttgccggcc tgtggattgc gggcgaagtg tccaatctga cccgcgccgc cagcgggcat
     1801 tattatttct cactcaaaga cagccgcgcg caggtgcgtt gcgcgatgtt caagggtgcg
     1861 gcggcgcgtt tggcgcaacc tttgaaagaa ggcgaccata tcgaagtggc gggcaaaatc
     1921 agtatttacg aggcgcgggg cgaatttcag attaccgtaa acgaagtacg gctcaaaggt
     1981 ttggggcagc tttacgaagc ctacgagcgg ttgaaggcgc agttgcaggc ggaaggcgcg
     2041 tttgcggcgg aacgcaaaaa acctttgccc gtccgtccgc aatgtatcgg catcgttacc
     2101 agtctggcgg cggcggcttt gcgcgatgtc gtaaccacct tgaaacgccg cgcgcccgaa
     2161 atccccgtca tcgtttatcc ggccgccgtt cagggcgcgg gcagcgggtt tcagattgcc
     2221 caagcgatta aaaccgcatc gcaacgcgcc gaatgcgatg tgctgattgt ctgtcgcggc
     2281 ggcggcagca tcgaagactt gcgggcgttt aacgaagaac cggtcgtgcg cgccatcgaa
     2341 gcctgcacga ttcccgtcgt cagcggcgtg ggacacgaaa ccgatttcac gctcgccgat
     2401 ttcgttgccg acgtgcgcgc gcccacgccg accggcgcgg cggaactggt cagccccaac
     2461 cgccaagaat cactgcaccg cctcgtccaa gcccaaggcc gtctgaaaac cgttttggag
     2521 caacgctatt tcgatgccag ccaaaaactc gactggctcg cgcggcaaat ccgccacccg
     2581 cgccaaaaac ttgacgagca gcgcgcttca atcggcaagc tggcgcaaac gctgtcttac
     2641 tcgatgacgc aaaacctccg cgcccacacc gcccgttttg aacgccaaac ccaagccctg
     2701 caacattgcc gtcctgatgt ttccgtttac cggcaagata tcgtccgcct tcagacggca
     2761 ttgcccgccg ccttcagccg gctgctcgcc cgtcgccgtc aaagcctgac cgcccaagcc
     2821 gcattgctcg aagccgtttc gccgcagcac attctggaac gcggcttctc cgttgtcaaa
     2881 aatacacgcg gacaagtcat ccgtaacgct gatgttttga agcaggggca gaagctgcac
     2941 attaccttct ccgacggcga aaccgacgtg cgcgtaagca aagaacaagg gcagcaggat
     3001 ttgttcgatt gcatttaaac ccaatcggaa aaaccgctcc ccctccgccg tcattcccgc
     3061 gaaagcggga atccagtccc ttgaccttaa gataatcttt aattcgtcat tcctgcaaaa
     3121 gcgggaatcc ggaagcggaa agccgccggg gtttatcaga aatgactgaa actcaaaaaa
     3181 cggattcccg cctgcgcggg aatgacgatt gatacgtttc gataatttat tgaagatggc
     3241 tgaaattcaa agttacagaa atttataaac aaaaaaacag caacctgccg ccgtcattcc
     3301 cgcgaaaacg ggaatccagt ccctaaaaag cgggaatccg gaagcggaaa gccgcaggaa
     3361 tttgtcggaa aaaacagaaa cctctccgca cacccgaaat gtttcagacg gcgcatcttg
     3421 gggcggataa aaacccaacc cgatattttt ttataatttt taataagttt ccattgggca
     3481 aatgaaattt tatttttcaa ctgacagaaa gaggatgtta tgaagttttt agaccgtgag
     3541 gcaagcattg ccaagccggg tttcaaccgt tggctcgtgc cgcccgcagc attagcggtg
     3601 caccttgcca tcgggcagat ttacgcctat tccgtattca acgcgccgct gaccaaactt
     3661 atcggcataa ccgaatcggc ggccggagat tggaagctga cgaccgtagg ttggattttc
     3721 agtatcgcac tcgcgatgct gggcgcgtcg gccgccctgt tcggcacatg gatggaacgg
     3781 gtagggccgc gcaaagccat atttgccgcc gcctgctgtt tcagcctggg cttcttcgta
     3841 tccgcattcg gcgtgcgtac gcacaacctc ttcctgcttt atttgggcaa cggcgtcatc
     3901 ggcggcgtag gcttaggctt aggctacatc gggccggttt ccacgctgat gaaatggttt
     3961 cccgacaagc cgggtatggc gaccggtttg gcgattatgg gtttcggcgg cggcgcaatg
     4021 ctggcctcgc cgctttccgt atcactgatg aacgcctttt caaacgccgc ttcggtcggg
     4081 gttgccgaaa cctttgccgt attgggcctg ttttacctcg cactgatgat gttcggcgcg
     4141 tttaccatcc gcgtacctgc cgacggctgg aaacctgaag gctataccgt gccgaaaacg
     4201 caaaacaagc cggtcagcag caatcatgtc aacgtgtccc aagccatgaa aacgccgcag
     4261 ttttggctgt tgttctgggt attgtgcctg aacgtaaccg ccggcatcgg cgtattgggc
     4321 caggcatccg tgatgattca ggaactcttt tccgaaacct ccgcaggcag gcaggcggca
     4381 gtcggcgcag gtgcggcggc aggcttcgtc agcctcctga gcctgtttaa tatgggcgga
     4441 cgctttttgt ggtcgagcgt ttccgacaaa atcggacgca aaaacaccta caccatcttc
     4501 ttcgtactcg gttcgctgct gtatttcgcc gttccctcca tcggcgaagg cggcagcaaa
     4561 gccctgttca tcatcggctt ctgcgtgatt atttccatgt acggcggcgg atttgccgcc
     4621 attcccgcct acctgaaaga cctgttcggc acctatcagg tcggcgcgat tcacgggcgc
     4681 atcctgctgg cctggtcaac cgccgccgtc atcggcccgg tactggtcaa ttacatacgc
     4741 caaagccaaa tcgacagcgg cataccggcg gcacaggcat acagcgtaac catgtacatt
     4801 atggcgggat tgttgattgt cggactgttg tgcaacctcg ccgtcaaatc cgtacacgaa
     4861 aaacaccacg aaaaagacat caaaaccgcc gcacgcagcg gcaaccccga cgacgaaacc
     4921 gccatatccg acgcttacct tgtgggcgaa aaagtttccg gcgacggcat atcggtctgg
     4981 tggcgttggg cattggccgt cataccgctc gcctacggcg tggtgatggt ctttgtcaaa
     5041 gcactcgacc ttttctcctg aaaacgcccg aataaaatgc cgtctgaaac agcaggtgtt
     5101 tcagacggca tttttacttt caggcttttt tgcggcggcg ttcgcccggc agcagcatat
     5161 ccgcccattt gaggatgttg gcgacttcgg cggggttgag ttcgtagaac tgtccgcgtt
     5221 tgaggcggtt gggcagtccg atggggccga aggcgacgcg cacgaggcgg ctgactgtga
     5281 ggccttggct ttcgaatatg cggcgcactt cgcggttgcg gccttcttta atcacgatgt
     5341 tgtaccattt gtttgcgcct tcgccgcctt gttcgtagat gcgttcgact tttgccaagc
     5401 cgtcttcgag catcacgcct tcttcggtga gactgcgcat ttgttcggta gtcagcccgc
     5461 ccagtacgcg cacggcgtat tcgcgttcga cttcgaagct ggggtgggcg aaacgttgga
     5521 cgagttcgcc ggaggtagtg agaatcagaa gtccgctggt gttgatgtcc aagcgtccga
     5581 tggcgaccca gcggctgctg gcggcctgcg gcaggcggtc gaatatgctg acgcggcctt
     5641 gcgggtcgtc gcgggaaacg atttcgcctt cttgtttgta atacaggatg atgcgcggca
     5701 ggcggtcggc ccatttgagt ttgatgatgc tgcctttgac ggtaacgtgg tcgtcggggg
     5761 taactttgtc gcccagttgc gcggttttgc cgttgaccgt tacccagccg ttgttgatcc
     5821 attcttccat ttcgcggcgc gagccgacgc cggaggctgc aagcactttt tgcaggcgtt
     5881 cgggttccat acgcgacagg tcgctgcggc gttctttcaa atcgcgcgcg tgttccataa
     5941 ttttttggtt gggattgcgg acgacgagtt ttttggcttt ggcggcgcgc tgtttggggg
     6001 cgttttgcag cttgatgccg tctgaagctt tttgtccgta agcttgggcg gcggttttgc
     6061 gcgtttcgtc tttgggacgg gctttgcttt tgaaaggttt ggcggttttc ttggcagacg
     6121 gggctgcgcc gtcgcgccat tggcgtttgc tggtgggttg cttggacatc atttttccta
     6181 actcgcctga taaggcggtt cttctgcggc gtgtgcggca ggacgggttg ataaaatgcc
     6241 gtcctcggtc ggacggttcg atattgtacc tgatgcggcg gttttgcgga tgaaatcgtc
     6301 gctgcggctt tggggacaaa gtttgtgcaa cggttgaaat cggtttgcgt gcgggagtag
     6361 aatctttcaa atgataagag gagcggtaaa tggatttgca caatattcgg gaagattaca
     6421 gcaaacggga attgtcggaa gccgattgcg ccgataatcc gatcgagcag ttcgagcggt
     6481 ggttggacga ggcggtacgc gccgaggtca acgagccgac ggcggtcaat gtggcggcgg
     6541 tcgacgggcg cgggaggccc aacagccgta tggtgctttt gaaggaggtt aattcagaag
     6601 gttttgtttt ctttacgaat taccacagcc gcaaggggcg ttcgctggaa ctcaatccgt
     6661 ttgcggcgat gacgtttttt tggccggagc tggagcgtca ggtgcgcgtg gaagggcgtg
     6721 tcggaaggct ggcggagaag ttgtcggacg aatattttga gagtcgcccg tatcagagcc
     6781 gtttgggtgc gtgggcaagc gcgcagagcg aggtgattcc gaacaaggcg gtattggtgg
     6841 caaaggcggc ggcggtcgga ctcaaacatc ctttgcacgt gccgcgtccg ccgcattggg
     6901 gcggctatat tgtgattccc gatttgattg agttttggca gggcaggccg agcaggctgc
     6961 acgaccgcat ccaataccgt ttgctggatg gcggctggat acgcgagcgg ttgtcgcctt
     7021 gaacaggaaa aaacatatgc cgtctgaaaa ccggaatcag gtttcagacg gcattttttc
     7081 acggggaaaa tacggacggg aagttttttg tgttccgaac ggaaagcccg aatcctcttt
     7141 ataccgagga attatgatgc ggacggcgtg aatgcgtcgg agaaaaacaa gttttccggc
     7201 agcttatgct gttgcacaaa cagatttttt gcttgttcgg tcatagccgg agagccgcag
     7261 gcaaacactt cgtattccga caggtcgggg tggtcttgtg ccgcgatgtc ttgtacgtgg
     7321 ccttttcttc cctgccagcc ctctccggga cgggacaata cgggggtgaa gcaggtgttt
     7381 ttcagacggc atgccaaccc ttgtgcttct tcgagggcat acaaatcatc ttgatgacgc
     7441 gcgccccagt agaaatgggc agcgcggctg ctgttttggc ggataaggtc gagcaggatg
     7501 ctgcggatgg gggcgtagcc tgtgtcggtt gccggcagga tgacgggttt gccgctgtct
     7561 tcctgcaagg taaacgaacc gagcgggcct ttaacgcgga cgatgccttt ttctttgact
     7621 ttgggttcgc tgccgaaaat catttccgag cagacaccgt tttcgcgcct gcggatgtgt
     7681 agttccaaaa tgccttcttg gtcgggcgaa ttggcgatgg agtagctgcg gctgacgttg
     7741 cccggcagca gtaaatcaat gtattgcccg gcgtagaagg caaacggcgg ggctttgggc
     7801 agggcaagtt tcaggagggc gacatcgtgt ttgaaaacca tactttcgat gcgtgcgggc
     7861 aaggtgcgga tgggtagggc atcggctttg cagccgggga tgttgatgtt gatatcgctt
     7921 tgcgcggtgg tgcggcacat caaaatcttg ccttgcgctt tttctgcttc ggataaagcc
     7981 tgttccgagt gtccgcccat ttgaatatcg ccgctggcca gttcggcttt gcattgtccg
     8041 cagacaccgt ttttgcagga atggggcaga ttgaggtttt gacgggcggc agcggacaaa
     8101 acggtttcgc cgtcgttggc ggcaaaggtg gtttggtcgg gcagggtaac ggtgtggttc
     8161 atcgtatttc cttttcggtt gaaaccccac cctttaggcc gataggatca gactttattt
     8221 gggaggggcg taaccccttt caaatcaggg caacacacag ggcgacattt tatgtgtcgt
     8281 cctgtgtgtt gaaacgtgga atattgtttt ttatgctgtt ttaatgtggt cagactgtga
     8341 aaatgccgtc tgaacgtcgg atttgggttt cagacggcat cttgcttatc aggcaagttt
     8401 ggctttaatc aactcctgca cctgagcggg attggctttg cctttgctgg tcttcatcac
     8461 ttgccccaca atcgcattca gggctttttc gttgccggat ttaaactgtt ccacggcttt
     8521 ggcgttgttt gccagcactt cgtccaccat cgcttcaacc gcgccggtat cggtcatctg
     8581 ttgcaaactg tgtttttcga tgatttcggc aatgctggtt tccggttccg cccacatggc
     8641 ttcaaaggct tttttcgcca gtttgccgct taatgtgcca tcggcaattt tgcccaccag
     8701 cgcggcaagg cgtggggcgg taatcgggct gtcggcaagt tccatgcctt ctttgttcag
     8761 cgtagcggca agttcgccgt tcatccagtt ggcagtcggc ttgccttgtc cgctctcttt
     8821 ggcggcttct tcaaaatagg cagcctgcac gcggctggcg gtgagcaggc gcgcgtcgta
     8881 ttcggacacg ccgtaatccg ccacgaaacg cgccgccatt tctttcggca gctcgggcat
     8941 ttctgctttg gctttttgca tttgggcatc tgaaatgatg acgggcagca aatcgggatc
     9001 ggggaagtag ccgtagtcgt gcgcgtcttc tttcaggcgc atcacgcggg tttcgccttt
     9061 ttccgggtcg aacagcatcg tcgcctgctg aactgtgccg ccgtcttcca aaatctcgat
     9121 ttgcgcttcg gcttcgtaat taatcgcctg atccaagaaa cggaaggaat tgaggttttt
     9181 aatttcgcgg cgcgtgccga attccgcttg gcctttcggg cgaacggata cgttggcatc
     9241 gatgcggaac gaaccttccg ccatattgcc gtcgcaaatg tccagccagg ttaccaagct
     9301 gtgtaaggct ttggcgtagg caacggcttc ggcggcggag cgcatttcgg gttcggatac
     9361 cacttccaac agcggcgtgc cggcgcggtt caggtcgatg ccggtcgcgc cgttcaagcc
     9421 ctcgtgcacg gatttgcctg cgtcttcttc catatgggcg cgggttacgt tgatggtttt
     9481 cacatcgccg ccgaccacga tttccaattt gccgtgttcg acaatcggca aatccaactg
     9541 gctgatttga tagcctttcg gcaagtcggg atagaagtag tttttgcggt cgaacacgtt
     9601 tttccggttg atttttgcat ccaaagccaa acctaatttg atggcttttt caacgacttc
     9661 gcggttcatt accggcagta cgcccggcag cgcgcattcc actacgctgg cgtgcgcgtt
     9721 gggttctgcg ccgaatgcgg tcgatgcacc gctgaagatt ttggatttgg tgttcaattg
     9781 gacgtggatt tccaagccga ttacagtttc ccaagtcata ggaggttctt tctctaaaat
     9841 atcaattcga tagtcttcgc atcagactgt ccggcggagc ggtttttccg tttggatgcc
     9901 gtctgaaatg ccgcgtgctt ctgttttcag actgtccttc atctttgtaa ccatatcgtc
     9961 cagcatttca taacgcttgc ggtacatcga acgctttttg ctttcgatgt cggcaaggtc
    10021 tttgcgggcg ggggtttggg gaagatgcca gtagccgtcc cgttccaaac ttgcgccgta
    10081 ttcctgccag aatgcgtcgt aattcatttt gacgcgcttt ttaagtttcc agcgtaattt
    10141 gacttgatgt ttttgtgcaa tgcctatcgc gccgtctaat tttaatgcgg cggcgaaata
    10201 ttgcagtgcg gttaccatca gttgttgggg acgtaagccg tgaagttgtt tggttatgcg
    10261 gcggacggtg tctttggctt cttcacctga cggcccttgt acggaggctg tcagcaggtg
    10321 tgtgccgaca aaggcgaagg tcgccatata cagccggttg cctgcttcat cgcgcaaaga
    10381 taaagaccac gcgccttctt cgacgcagtt gtcgttgcgg ttgagccaca agctgatgcc
    10441 gtctgaaagg tgcgccaaga ccagatggaa gcggcagtct tccatttggc acagaacgtc
    10501 tgtgccgaag agtttttccg ccatgagaaa atctgccgtc atcgcatcta aacggcgttt
    10561 gcagttaaaa cgcctgtcaa caaattcgcg cagcagcgga taggcatcct gcgggcagtg
    10621 gaggaacagc ccctgacgga taggggaggc gttgacaaac tgctcgaagg cgtaaatttc
    10681 tttttttccg aaaaattttc gcaatgtgta ttttaaatgt tgcagccgat ataaaggcgc
    10741 atagctgtaa acggtgcgaa aatcggggaa ggtaaaggtg cggttctgct tcattcgggt
    10801 cgtttgccgt gccaatcgct gttgagttgg atttgatgcg ccgcaccgag gattttggct
    10861 tcggcgaagt agttgccgac aagctgtaca ccgacgggca gtccgccgcc gctgaagcct
    10921 gcgggcaggg tcaatgcggg cagtccggcg aggttgacgg cgatggtgta aatgtcgctc
    10981 aagtaggttt caaccggaga agtatccgct ccgattttgg gtgcggcgga gggtgcggtc
    11041 ggcgcgagga tgaggtcgca ccgtgcaaat gccgtctgaa agtcatcggc aacgaggcgg
    11101 cgcagttttt gggctttgag ataataggca tcgtagtagc cgtgcgacag tacgtaagtg
    11161 ccgatcatga tgcggcgttt gacttcgctg ccaaaacctt cggcgcgggt tttgccgtac
    11221 atttcttcca aatcgccgaa ttgggcggca cggtgtccgt aacgtacgcc gtcgtaacgt
    11281 gaaaggttgg tgccggcttc tgcggaggcg aggacgtagt aggcggggat ggacagcttg
    11341 gtttgcggca gggaaacttc gaccggttcc gcgccttgtg ctttcagcaa atcaatggtg
    11401 ttttgcaatg ccgtctgaac atcggtgctg ttgccttcgc tgaagtattc tttgggcagg
    11461 ccgattttca cgcctttgag cggtttgtcc aaatcgcggg tgtagtcttc tttttcgcgt
    11521 tcgaagctgg tggagtcttt ggggtcgaaa cctgccattg cattcaacag aatcgcgcag
    11581 tcttcggcgg tttgcgccat cgggccggct tgatcgaagc tggaggcgta ggcgaccata
    11641 ccgaagcggg aaaccgtgcc gtaggtaggt ttgatgccgg taatgccgca gtgcgatgcg
    11701 ggttggcgga tagagccgcc cgtgtccgaa ccgagcgcgg caggggcgag gcgcgcggca
    11761 acgacggcgg cggaaccgcc tgacgaaccg ccgggtacgt gttccggatt ccacgggttt
    11821 ttggccgcgc cgtagaatga gttttcattg gtcgaaccca tagcgaactc gtccatgttg
    11881 gtgcggccga gcgttaccat accttcgtcg agcaggtttt ggacgacggt ggccgtgtag
    11941 ggggagacga agttgtcgag cattttggac gcgcacgcgc tgcgccagcc ggtttggcag
    12001 aaaatgtctt tgtaggcgac gggaacgccg gtaagtgccg aagcgttgcc ctgtgcgatg
    12061 cgttcgtcgg cggcacgggc ttcggcgagg gttttatctt ggtcgatggt gatgtagccg
    12121 ttgagggcgg gatttttttc ggcaatggcg gcaaggtatg cgcttgccag ttcgacggcg
    12181 gaaatctgtt tggactgcaa caggctgcct gcctgtttca atgtgtattg ggtcataaat
    12241 cttccatcct taaagggctt cgggcggtat tgctgatgcc gtctgaagcg tattcggatt
    12301 attcttcgat aacttgcggt acgatgtaca ggcggttgcg tacttccggc gcaacggctt
    12361 ggtattcggc ggcgcggtcg gtttcggtta cttcgtcttc acgcaggcgg agggcgacct
    12421 cgtgcgggtg cgccatcggc tcgatgccgt ctgtgttgat gttctgcatc tgttcgacca
    12481 tagtgaaaat gtcgtttaat tcttgaagcg atttttcttt ttcttccgca gtcagctgca
    12541 gtcgggagag tcgggcgatt ttgtctacgt cggcaagtgt cagtgccatg aaaagcatcc
    12601 ttgtctgatg gtaaagatac cgtcgttcgg gtatgatggg gcgtattgct tggattttta
    12661 attataacgg aaaaatccgt tgcggcggca atttgcagca tcggatgcct gccgcacggg
    12721 tttgaaagag gggaaataat gggattgggt atggaaatcg gcaagctgat tgtggctttt
    12781 ttggtgctga tcaatccgtt tagcgcgttg tcgctttacc ttgacctgac caacggacac
    12841 agcacgaagg agcgcaggaa ggtcgcgcgg acggccgccg tcgccgtgtt tgccgtgatt
    12901 gcggtatttg cgctgatcgg cggtgcgcta ttgaaggttt tgggcatcag cgtcggttcg
    12961 tttcaggtcg gcggcgggat tttggtgctg ctgatcgcca tttcgatgat gaacggcaac
    13021 gacaatcccg ccaagcagaa tctcggcgcg cagccggaaa cggggcaagc gcgccccgcc
    13081 cgcaatgcag gggcgattgc cgtcgtgccc atcgccatac cgatcaccat cggtccgggc
    13141 ggtatttcga ccgtgattat ttacgcttcg gcagccaaaa cgtacagcga tatcgcgctg
    13201 attatcgcgg ccggtttggt ggtcagtgcg atttgttatg ccattttaat cgttgccggg
    13261 aaggtcagcc gcctgctggg cgcgacgggg ctgacgattt taaaccgcat tatgggtatg
    13321 atgctggcgg cggtatcggt ggagattatt gtgtcgggac tgaaaacgat attcccgcaa
    13381 ctggcaggtt gattcgatgt ttcacagtgt caatgtattt acgggcgaaa cgctttaccg
    13441 ccgccccgat caagattatg cggagtttga acggcggctg gcggatttga aaatgcacgg
    13501 cagggcgttc gcgcaattgg gcgtaaccga acgtgccgcg cgtctgcaaa aatttgccgg
    13561 ccgtttggag gcggaaaaag agcgttttgc ggaaatggtg tgcgaagaag tcggacgctg
    13621 cctgcacgaa tgccgtgccg aaatcgtcaa gtctatcgaa ctgatacgct attacgcccg
    13681 cctcgccccc gaactgctcg cccacaaaac cattgcgacg caggcgagtt tgagtcaggt
    13741 gcgcttcgag cctttgggcg tggtgtttgc cgtcatgcct tggaactatc ccgtctggca
    13801 ggtattgcgt tttgccgttc ccgctatgtg cgcgggcaac gcgtgcgccg tcaaacccgc
    13861 gcccagcgtg gcacgcgtca gtcgggcgtt gttcgatttg gcttcagacg gtattcctct
    13921 ggcaggcgcg tggctggatg aggcggacac gctcaaggca gtcgaagata ccgatgcgat
    13981 ggcgtttacc ggttcgacgc atacggggcg cattcttgcg gcacatgcgg gcgcaaacct
    14041 caagaaaacc gtgttggagc tcggcggcag caacgccttt atcgtgatgc ccgatgccga
    14101 tttggaacgc gccgccgcag aagcctgtta ttcccgtttc cgcgatgcgg ggcaatcgtg
    14161 taacgccgcc aagcgcatca tcgtaaccga agccgcagtc gaccgcttta ttcagctgtt
    14221 tctcgccgaa tgcgccaaat tgaaaatggg cgacccgaaa catcccgata ccacgcttgc
    14281 accgctgcac cgcgaagatt tgcgggaccg ggttcacggg caggttgaag atgccgtttc
    14341 aaacggcgcg gtgtgcctga ccggaggcaa agttccacag gggtcggggt ggttttaccc
    14401 tgcgacggtt ttagacaggg taaatcctgc ctgccgcgtc tggagagaag aagtattcgg
    14461 ccccgtcgcc ctgattttgc gcgccgaaaa cgaagaacac gccatctgcc ttgccaatga
    14521 ttccccgttc gggctcggtg cctgcattta taccgccgat actgaacgcg cctggcggtt
    14581 tgccgaaaaa atacaggccg gatcggtgtt tatcaaccgc cataccagca gcgatttgcg
    14641 cctgcctttc ggcggagtca aagattccgg ttacgggcgc gaactgtccg aattcgggtt
    14701 gtacgagttc gtcaacgtca aaacctactg gcagaaataa acaaaccccg tgccgcttca
    14761 ggcggcatcg ggtttgcgct agagccgatt aacggcagta tttgtttacg gcgttattgt
    14821 atttacggat caaatcatcc ttgtttttcg catttgagtt tcccaccgcc ttcaggttca
    14881 tttttgaaat ccggcagttt tcttctttgt tctgccgttc ggtttcggca atttttttct
    14941 tttcttcctc aagctgcccg tttttctcgg cgatatcctt ttcgttttcc ttcgcactgt
    15001 ccgcattcgt atcgacggca ggtttgggct tgaccgccgg tttggtttgg agcgtccgca
    15061 ggttgaggat ttggctctgg tcgggatgaa gctgtttcgg cacatccgaa tagctgttgc
    15121 cgccgccgtc tttccaagta aagacggcgg ttccggcagg cgggacgggc aggaaagagg
    15181 cgagggtaaa tgtgatgacg gataaagcaa agttcattag ggtttccttg atggctgact
    15241 gcccgggcag aatcgggatt ggttcgggcg gtgtcttttc cgggttcggg tcaaggcagg
    15301 gaagacactc cgccttaata tggtgcttta tatattgggg taaaacagat tcccaaaaat
    15361 atcattggaa tatggttatg ctaccgtata ttttggcaaa gaaaaagaaa attgcaggca
    15421 ggcgcgtata aaatccgatg aggcgcgtga ttctgccttt ggtgttgaat cggttgaatc
    15481 tgcggttttt gatattttta attgatgaaa tgccgtccga acgctttgaa aagggttctg
    15541 acggcatttt gttcaaaccg gtttatttgc gttgcaatac ggcggcgaag aagccgtcgg
    15601 tttggtgtcg ggcggaatcg aggcgcaggt atttgccggt atccaaatcg accttcaggt
    15661 tttgcagcag ttcggcgcag ttgacgggtt caaattcggg atgttcggac aggaaacgtt
    15721 tgatttgcag ttcgttttct tccggcaaca cgctgcaggt ggcgtaaacc aaacagcctt
    15781 gcggtttcac cagtttggag gcggcatcga ggatactgtg ttgctgttcc aaaagtttgg
    15841 cgacggtctc ggcggattgg cggtatttga ggtcgggatt gcggcgcagt gtgcctaagc
    15901 cggagcaggg cgcatcgacc aacacgcggt cggctttgcc tgccagtcgt gcgatacggg
    15961 tatcgtgttc gctgccgata cgttcggggt ggatgttggt cagtccggca cgggtcatgc
    16021 gcggtttgag gttggcaagg cgtttttcgg cgatgtcgaa ggcgtagatt ctgcctttgt
    16081 tggccatttg ggcgccgaca gccaaggttt taccgccggc tccggcacag aaatccacaa
    16141 tgatttcgcc gcgttttgcg cccaccaata aggcaagcag ctggctgcct tcgccttgga
    16201 cttccagcgt gccgtccaaa aacagttcgt gtttgttaag cgcgattttg tttttcaggc
    16261 ggatgcccca aggagaataa ggcgttgcct ctgcatcggg gctttcggct tgcaacaatg
    16321 gcaatacttt gtcgcgtttg cctttcaagg tattgacgcg gatgtcgagc ggcgcagctt
    16381 ggttgatgct gcggccgaaa gcgaggattt cttcttcgct ccaatgctgt tgcagttgtt
    16441 ccaccagcca ttgcggcaat tctgcggcgg tattcaggcc gtctgaaaac tcggttttac
    16501 gggctttcaa attgccgaaa aactctgttt cttcttcatc aagcaggtct ttgatttggc
    16561 tgatgttggt acttctgccg agaaccagcg cggcgagtgc ggctttgcgc ggctgcgcgt
    16621 gcggacggcg cagggcggta ctgatttttt gatagtgtcg caacgcggca aaggcggttt
    16681 cggcgatttc gtggcggtct tggcggccga gctttttgtg tttgcggaaa taggcggaga
    16741 ggacggcatc ggcaggctgt ttgaaagtca gcatttcagc caaaactttg gcggtatggt
    16801 cgagttgtgc ggcgttcata atgtaatggg ttctcttaaa gttggtaaag ggtttcagac
    16861 ggccttcata atacgttcga tttcgtgcca aaagccgtcc ggccgacatt ccaaaacggc
    16921 aatcaagcct tggtcgatgc ggcggatttc ggttgcgttt aatgtttcgg tttcggcgac
    16981 acgcgcaggc gcgagataga ccatgcggtc gagcaggtga tagcgcgctt cttggcgttc
    17041 aaacccgtat tccgcccaat cttgaatata gatgccgcgc cagccgtatg gattaagcgg
    17101 cggctcaaaa gcatggaaac cttgtggaaa aaatccgatg ccgcgcacga tggaagcagg
    17161 aagtggattt tccggcaggt cttgtgcggc taaggttgct ttgccttgcg acgtatgcac
    17221 cagctggaat tgctgcacca atttggcggc tttgtccgtc agcgtgtctt tgggattgag
    17281 accgcgcagg ttctgcactt ggtctccgcc gtagtattta cacgccagct cgatatgata
    17341 gggctgttgg ttgagggaaa cgacaaaatc cgcggcgcct aaagtttggc cgtctgaaaa
    17401 aacggtcaga ttatatgcgt gcagtttggt gtgcggtgcg ttggtaaacc aaaaagccag
    17461 cagctcttcg gcataaatgc cgagacggtg gtcgaacggg gcgcgttgtg caaggtaatc
    17521 cgtcagcggc gcgggatcgg catccaatgc taaaaggtag cggaaaccgc gttcccccag
    17581 tagttcgcgc acgctcaatt cgcaaccgct ttgccacaaa ggcggcgcag tcagcagcga
    17641 ggcgaggtcg cggacgggtt ggctggtgag tttccaccat aatgcgtcta gggcgtaatt
    17701 catgcttatc cgaatatcag tcatgccgtc tgaaaaagct tgtaatgttt tcagacggcc
    17761 ttaatcagtc ttttttatgg atacggtggc tgacggtatt gaaaaaaccg cgcaggatgt
    17821 cgatgtcttc ggtttgcgtg ttggcgcgtc cgaacaggct ctgcatacgg cgcatcagac
    17881 gctcgccgtt gcggcggttg aaaaagccga tgtcgtccat cacgctttcc atgtgggcga
    17941 gcatgccttt gatttgctcg tgggttgcgg cgtggtcttc ctgttgaaga tgggtcatgg
    18001 gcgaatcggt ttggctgaaa atttcgtagc acacgacctg cacggcttgg gcgaggttga
    18061 gcgagaaata gtcggggttg ccgttgatgg tcatcagtcg gttgcacgct cggacttctt
    18121 cgatgctcaa gccgaaagtc tcgttgccga agaccagcgc cactttctcg ccgcggttgg
    18181 cggcctgcag taattcgggc accaaatcgc gcggggtttg cagcggcgcg gtaatttcgc
    18241 ggcggcggct ggtcagggcg caggcgatgg tggtgtcggc aagggcttcg tccagtgtgg
    18301 cgacgatttc ggcgttgtgc aatacgtccg ccgcgccgga agcgaggatg aaactttctt
    18361 caggcagtgc aaaactttgc acgtcatcgg gattaaaaac gggcggattt tccgtcatcg
    18421 gcgttgccat cagattgggg gtgacgatgg tcagcctgtg cagacccatc gttttcatcg
    18481 cgcgtgcggc agagccgatg ttggcggggt ggctggtgcg tgtgaggatg atgcggatgt
    18541 tgccgaggta gtcgggcagg gcgggtttga gagcagtcat gttcggtttt cggtcggaat
    18601 ggaatagggt ataatgcgcc gtctttttcg ttcggacggt gaaatgccgt ttgaactgtt
    18661 ctttaacaac gtcggaaatt taacgttgcg cctgaagcag acacgcgtca ggcggtattt
    18721 tacccgattt ggcagggttt gccccaacca gataaactcc gattttgccg ctccgaagga
    18781 ctgcacgtcc gaaccggcgg tatgccaccc ttaaggaaat ctgatgaatc cgtttttgaa
    18841 tacagccttt aaagccgccc gccgtgccgg tcagatgatg attcgcgccg caggtaacct
    18901 cgatgccgtc aaaaccgaca gcaaagcctt caacgatttt gtttccgatg ttgaccgcaa
    18961 ttccgaaatc atcctggttg aggctttgaa agaagcctat ccgcatcaca aaatcacttg
    19021 cgaagaaagc ggcttccacg gcaaagctac agccgagtac gaatggatta tcgatccgct
    19081 cgacgggacg accaatttcc ttcacggcca tccccaatac gccatctcta tggcactgct
    19141 gcacaaaggc gtgttgcagg aagctttggt gtactccccc gaacgtaacg acgtgtacat
    19201 ggcttcgcgc ggtaaaggcg cgttgcttaa cgaccgccgc atccgtgtct ccaaccgcat
    19261 cgaattgaac cgctgcctga tcggtaccgg tttccctgtt gtcgatcaaa gcatgatgga
    19321 caaatatctg gcgattttga aagacttttt ggcaaaaacc gccggaggcc gccgcgaagg
    19381 cgcggcttct ttggatttgt gcgccgtagc aacaggacgt tttgacggct ttttcgagtt
    19441 caacctcaaa ccgtgggaca ttgccgccgg tgcattgatt gtccaagaag caggcggcat
    19501 cgttaccgat atgtcgggtg aggacgcttg gttggaaagc ggcgatattg tggctgccaa
    19561 tcccaaagta ctggcgcaaa tgttaaaaat catttccgca cacgtttaaa tttcagccag
    19621 ctcccggaaa tgcgggaaaa cgggcgggta tgccgtctga agtatcgtgc cgatatttca
    19681 gacggcattt ttattggcgg cggggcagga aggcggaaac ggtcaaatgc ccgaaattgc
    19741 cgggaatgga aatccgtatc tggttaaacg gagaaccctg tgcaatttgt cccttttctt
    19801 tcaattgttt aaaggcggtt tgctggaatc taaatcggct gtggcagaaa acagacaccg
    19861 gggaataaaa aa
//
LOCUS       DAWXHA010000028        19856 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.028, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000028 DAWXHA010000000
VERSION     DAWXHA010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19856
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.028"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            75..680
                     /locus_tag="AABD07_000761"
     CDS             75..680
                     /locus_tag="AABD07_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003772410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HFB2355335.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHAQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            752..1144
                     /locus_tag="AABD07_000762"
     CDS             752..1144
                     /locus_tag="AABD07_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HFB2355336.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYCPDTPSENTSAETAPRPAKKGLKLVK"
     gene            complement(1173..1322)
                     /locus_tag="AABD07_000763"
     CDS             complement(1173..1322)
                     /locus_tag="AABD07_000763"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355337.1"
                     /translation="MPSEARIAGSDGIFNIPISNRQGQHGFDTPKRVLPINGFRLRPI
                     GQNAV"
     gene            complement(1343..1789)
                     /locus_tag="AABD07_000764"
     CDS             complement(1343..1789)
                     /locus_tag="AABD07_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HFB2355338.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VEAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(1921..2133)
                     /gene="rpsU"
                     /locus_tag="AABD07_000765"
     CDS             complement(1921..2133)
                     /gene="rpsU"
                     /locus_tag="AABD07_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HFB2355339.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            complement(2422..4272)
                     /locus_tag="AABD07_000766"
     CDS             complement(2422..4272)
                     /locus_tag="AABD07_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFB2355340.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTNTLPAGKTPADNIETADLSA
                     SVPTRPAEPEGKTLADYGGYPSALDAVKQNNDAAAAAYLENAGDSAMAENVRNEWLKS
                     LGARRQWTLFAQEYAKLKPEGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLL
                     EQAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIG
                     KEARKSPNAAALLSEMESGLSPEQRSFAWGVLGHYQSQSLNVPAALDYYGKVSDRRQL
                     TDDQIEWYARAALRAQRWDELASVISHMPEKLQKSPTWLYWLARSHATLGNLQQAAKL
                     YEQAAATGRNFYAVLAGEELGRKIDTRNNVPDADTNSVRRMSEDGAVKRALVLFQNSR
                     TAGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTL
                     RYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVMGAQSGVGAQGLMQVMPATAREI
                     AGKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADIP
                     LEGAVYAETIPFSETRDYVKKVMTNAAYYASLFGAPHIPLKQRMGIVPAR"
     gene            4311..4496
                     /locus_tag="AABD07_000767"
     CDS             4311..4496
                     /locus_tag="AABD07_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355341.1"
                     /translation="MEKTKCRLNRRLPELYAETAPSLECFRHNLYFSIICRLGANRCL
                     CPFQTALSEMVARFLLY"
     gene            4637..5386
                     /locus_tag="AABD07_000768"
     CDS             4637..5386
                     /locus_tag="AABD07_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HFB2355342.1"
                     /translation="MGKTMIILDKVSKHYQTRDKTRFAAVEPTSLEIQDGEIFGLMGY
                     SGAGKSTLLRLINLLERPDTGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLSNR
                     TVAGNVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARAL
                     APKPQVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAAL
                     LDKGKVVEIVEVRGNQIHAQSEIGRELIRED"
     gene            5388..6074
                     /locus_tag="AABD07_000769"
     CDS             5388..6074
                     /locus_tag="AABD07_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFB2355343.1"
                     /translation="MAGLTFEQAVSTIVGMKDEIVRALGETFVMVGLSTTFAVIFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPIAIVLKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            6233..7099
                     /locus_tag="AABD07_000770"
     CDS             6233..7099
                     /locus_tag="AABD07_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355344.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASAAAPSADNGAAKK
                     EIVFGTTVGDFGDMVKEQIQAELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHK
                     PYLDDFKKEHNLDITEAFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARALV
                     MLNELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYA
                     ISSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGY
                     KYPAAWNEGAAK"
     gene            complement(7162..7860)
                     /locus_tag="AABD07_000771"
     CDS             complement(7162..7860)
                     /locus_tag="AABD07_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HFB2355345.1"
                     /translation="MLNRVFYRILGVADNLYPCLSDFCFFTIIAGLPLQAVLWERRMM
                     VRRLIIGISGASGFQYGVKALELLRAQDVETHLVVSKGAEMARASETDYTKDEVYALA
                     DFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRR
                     LVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTADDIVAHSIAHTLSLFG
                     IDTPDLAEWQGMAD"
     gene            7889..8749
                     /locus_tag="AABD07_000772"
     CDS             7889..8749
                     /locus_tag="AABD07_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HFB2355346.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTAVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLSEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPESVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            9423..9776
                     /locus_tag="AABD07_000773"
     CDS             9423..9776
                     /locus_tag="AABD07_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HFB2355347.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAIWHQSLVFVPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            9766..10632
                     /gene="atpB"
                     /locus_tag="AABD07_000774"
     CDS             9766..10632
                     /gene="atpB"
                     /locus_tag="AABD07_000774"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HFB2355348.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHSEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRIVPTADLNTALALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            10689..10925
                     /gene="atpE"
                     /locus_tag="AABD07_000775"
     CDS             10689..10925
                     /gene="atpE"
                     /locus_tag="AABD07_000775"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HFB2355349.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            10995..11465
                     /locus_tag="AABD07_000776"
     CDS             10995..11465
                     /locus_tag="AABD07_000776"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HFB2355350.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKIAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLRDQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            11470..12003
                     /locus_tag="AABD07_000777"
     CDS             11470..12003
                     /locus_tag="AABD07_000777"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HFB2355351.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ALLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            12014..13561
                     /locus_tag="AABD07_000778"
     CDS             12014..13561
                     /locus_tag="AABD07_000778"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HFB2355352.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVSTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTLGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPVEKIAPGVIARKSVDQPMQTGLKAIDSMIPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            13586..14461
                     /gene="atpG"
                     /locus_tag="AABD07_000779"
     CDS             13586..14461
                     /gene="atpG"
                     /locus_tag="AABD07_000779"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HFB2355353.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDKIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKPPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            14499..15896
                     /gene="atpD"
                     /locus_tag="AABD07_000780"
     CDS             14499..15896
                     /gene="atpD"
                     /locus_tag="AABD07_000780"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HFB2355354.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSDTGSPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFSGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LAVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            15907..16329
                     /locus_tag="AABD07_000781"
     CDS             15907..16329
                     /locus_tag="AABD07_000781"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HFB2355355.1"
                     /translation="MSIMQVEVVSGEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGILEVQPDKVTVLADVAVRSAEMDRARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
     gene            16501..17397
                     /gene="glyQ"
                     /locus_tag="AABD07_000782"
     CDS             16501..17397
                     /gene="glyQ"
                     /locus_tag="AABD07_000782"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HFB2355356.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTPDGNTVSYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLFAEENADLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYIESREKLGFPLIKK"
     gene            17514..19577
                     /locus_tag="AABD07_000783"
     CDS             17514..19577
                     /locus_tag="AABD07_000783"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HFB2355357.1"
                     /translation="MTTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK
                     IEDLTIIHDGRQDVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDVVNVSVLGLQSGNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVA
                     SFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPQGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     VFKQLPEAAALAAANKRVQNLLKKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAA
                     AVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            19641..>19856
                     /locus_tag="AABD07_000784"
     CDS             19641..>19856
                     /locus_tag="AABD07_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFB2355358.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLAAVVNQTWRNLDILIVDDGSTD
                     GTLAIARRFQEQDGRIRILAQPRNSGLI"
BASE COUNT         4706 a         5288 c         5204 g         4658 t
ORIGIN      
        1 aacgccgtac tggtttttgt taatccacta taaatcagcc gttttgcagg catcacacag
       61 gagcgacaat tattatgatg accctctatt ccggcattac ctgccccttc agccaccgct
      121 gccgcttcgt tttgtacgaa aaaggtatgg attttgaaat caaagacgtc gatatttaca
      181 acaaacccga agacctcgcc gtcatgaatc cgtataacca agttcccgtg ctggtcgagc
      241 gcgatttggt gctgcacgag tccaacatca tcaacgaata cattgacgaa cgcttccccc
      301 atccgcagct tatgcccggc gatcccgtta tgcgcggccg gggccggctg gtgctgtacc
      361 gtatggaaaa agaattgttc aaccacgccc aagttttgga aaaccccgct gctaccaaca
      421 aggaacaggc aaaagcgcgc gaagccatcg gcaacggtct gaccatgctt gccccttcgt
      481 tcagcaaaag caaatacatc ctcggcgaag atttttctat gattgatgtc gccctggccc
      541 cgctgctgtg gcggctcgac cactacgatg tcaaactggg caaaagtgcc gcgccgctgc
      601 tcaaatacgc cgagcgcatc ttccagcgcg aagcctttat cgaagcactg acacccgccg
      661 aaaaagccat gcgcaaataa gcccggaatg cttgcaaaac ccaccgtttt gcaggcattt
      721 tcacattcag gcacaccaca cggaacccat tatgcccacc tcaaccaaac cctatatcct
      781 ccgcgcactt tgtgaatggt gcagcgacaa cagcctcaca ccgcacatcc ttgtctgggt
      841 caacgaacac acgcgcgtcc ccatgcagta cgtccgcgac aacgaaatta tgctcaacat
      901 cggtgcgacc gccacgcaaa accttcaaat cgacaacgat tggatcagtt tttccgcccg
      961 tttcggcggg caggcgcacg atatatggat acctgtcgga cacgtcctca gccttttcgc
     1021 acgggagacc ggtgaaggta tggggtttga attggaggcg tactgccccg atacgccgtc
     1081 tgaaaacacc tctgccgaaa ccgcgccccg acccgccaaa aaaggcttga aattggtcaa
     1141 ataaatctat gccgtctgaa cggaatcgtg tttcagacgg cattttgtcc gatggggcgc
     1201 aaacggaatc cgtttatcgg caaaacccgt ttcggcgtat cgaaaccgtg ttgcccctgc
     1261 cgattcgata ttgggatatt gaaaatgccg tctgaacctg cgatacgggc ttcagacggc
     1321 attttgtccg atattcgggc aatcaggcgg tcagcacggc tttcaagatt ttgttgactt
     1381 cacccatgtc ggctttaccg gcaagtcggg ttttcaatac gcccatcact ttgcccatat
     1441 ccgccatacc tgccgcgccg gtttcggcaa cggcggcttc gaccgcagta cggatttctc
     1501 cggcggagag catttgcggc aggtagcggt gcagtacctc gatttcggcg ttttctttgt
     1561 ctgccaaatc ctggcggccg gcttcagtgt agattttcgc gctgtctttg cgctgtttga
     1621 ccattttggt caggatggcg gtgattttgg catcgtcggc ttcggtgcgt tcgtccactt
     1681 caaactgttt gacggcggcg ttgataaggc ggatggtgcc gagggaaact tggtctttgg
     1741 cgcgcatcgc ggttttcatg tcttcggtaa ggcggatttt caggctcata atgtcctcgc
     1801 tgggatgtcg gatggaaacg gcgggtttcg atgccgtctg aaaagcaaaa cacaccgcag
     1861 agcaggtctt gcggtgtgtc ctcatatcac agggctgacc tgtaatctgt acttgaacgt
     1921 ttagtacatt ttgggcggca gttgttggct gcgcaggcgt ttttgcaggc gttttacggc
     1981 tgccgctttt ttgcgtttgc gttcggtagt cggtttttcg taggcttcgc gggcgcgcag
     2041 ctcggtcagc aggccggttt tttctacggc gcgtttgaaa cggcgcatag cgacttcaaa
     2101 tggttcattc tcttttacgc ggattgcagg cattttattt cctttaataa attcggttgt
     2161 tgcatctgcc catcatatcg gtggaaaggg tagggcagac ggtgttgaaa gtttactgta
     2221 tcgctgtgcc ttgcggcggc gggatacgcg ccgtgacgga aacatcacct cctaacgggt
     2281 cggcttgtgc cgtgtcaagc tgcttgaaaa agcaggaaaa acaattttcg gattgtctta
     2341 tatttatggt tcgccgtcaa tgccgttcgg gataaaaatg ccgtctgaaa gaccgggcgg
     2401 gtttcagacg gcatcggtac gtcagcgggc ggggacaatg cccatacgct gtttgagcgg
     2461 gatgtgcggc gcgccgaaga ggctggcgta gtaggcggca ttggtcatta cttttttgac
     2521 atagtctcgc gtttcggaaa acgggatggt ttcggcatat accgcaccct caagggggat
     2581 atccgcctgc catcggcgcg cccttccggg gccggcgtta tagcctgcgg tggcgagaac
     2641 ttcgttgttt tgcaggcggc gtttggtgtc cgccatatac cacgtcccca tacggatatt
     2701 accgtcggcg gtgtaaagtt gtgcggcatc cataccgatt ttgccggcga tttcgcgcgc
     2761 ggtggcaggc ataacctgca tcagcccctg cgcgcctacg ccggattgcg cgcccatgac
     2821 gaaacggctt tcttgacgaa tcaggccgta aacccacgcc ggatcgacat taacattttg
     2881 cgcgtggcgg attaccgtgt ctttaaacgg cgaaatatag cgcaatgtgt agttgagttt
     2941 gcggtcggtg cgttccgcgc tgttgaccgc catatcgtaa aaaccgtggt caaacgcggt
     3001 ttgcgcggcg gtcagcagct tgtcttcgtc gaagccgcgt gtggcgaaac gccattccgc
     3061 ctgagcctga cggcgcattt ttgcatcgcc ggcggttcgg ctgttttgga acaataccag
     3121 tgcgcgtttg actgcgccgt cttccgacat gcggcggacg ctgtttgtgt cggcatcggg
     3181 aacattgttg cgcgtatcga ttttgcgccc caactcttcc cctgccagta cggcataaaa
     3241 attcctgccc gtcgctgccg cctgttcata gagttttgct gcctgctgca agttgcccag
     3301 cgtagcatgg ctgcgtgcca gccagtagag ccaggtcggg cttttttgca gtttttcggg
     3361 catatgcgag ataacggaag ccagctcgtc ccaacgttgg gcgcgcaagg cggcgcgggc
     3421 ataccattcg atttggtcgt cggtcagttg gcggcggtcg gaaactttgc cgtaatagtc
     3481 caaggcggca ggcacattga ggctttgcga ctgataatgc cccaatacgc cccacgcgaa
     3541 actgcgttgt tcggggctta aaccgctttc catttcggac agcagggcgg cggcattcgg
     3601 cgatttgcgt gcttctttgc cgatgacgtt caacagggca tattcgcgcg aaccttgtgt
     3661 accgccgtca aacgggctgc ccaatgcggc ggcaaggttg cgcgcgtccg tcgtttggcg
     3721 gccggccagc agtccgcgca cgcgcctcca ggcatcgttg ccgtccaaca agccggatgc
     3781 ggctgcctgt tccaacagtt tggtgcagcc cgaaggcagt ttgcccgtat ttttgaccag
     3841 ttcggcggca cgcgtatagt cgttgcggct cgaatcggcg tagcattcga cttcttgggc
     3901 gcgcccttca ggtttgagtt tggcatattc ctgtgcaaac agcgtccact gtctgcgcgc
     3961 gcccaaagac ttcagccact cgttgcggac attttccgcc atcgcgctgt cgccggcgtt
     4021 ttccaaatag gcggcggctg ccgcatcgtt gttctgtttc actgcatcca gtgcggacgg
     4081 gtagccgccg taatctgcca gcgtttttcc ttccggttcg gcagggcggg tgggaacgct
     4141 tgccgaaaga tcggcagttt ctatattgtc tgccggggtc ttgccggctg gcagtgtgtt
     4201 tgtcgaagaa cacgcggcaa gcaccagggc cgccagcagc ggcagggaat gcttcataga
     4261 gggtaggtac atcggatttc cttaagaatc ggaaccctga acggtcaggg ttggaaaaga
     4321 caaaatgccg tctgaacagg cgtttgcccg aattatatgc cgaaactgca ccgtctttgg
     4381 aatgtttccg acataattta tatttttcaa tcatttgccg tttgggtgcg aaccgctgcc
     4441 tttgcccgtt tcagacggca ttgtccgaaa tggttgcccg cttcctgctt tattgacaaa
     4501 aaaacgcttt cccgataata tcctacgaaa attaacctgc cgatttgaca cagcttgcgg
     4561 gcataacagc taaagcgttc cgacaatttc agctttatct tccgcgcccg ttgtgtccga
     4621 catcgggctt tgttgtatgg gaaagacaat gattattttg gacaaggttt ccaagcatta
     4681 ccaaacgcgc gacaaaaccc gttttgccgc cgtcgagccg accagcctcg aaattcaaga
     4741 cggcgaaatc ttcgggctga tgggctattc cggtgcgggc aaatccactt tgttgcgcct
     4801 gatcaacctg ttggaacgcc ccgacacggg caaagtcaac gtctgcggac aagaactgac
     4861 cgcgctcgat gccgccgcat tgcgtcaggc gcggcagaat atcggcatgg tgtttcagca
     4921 gttcaacctt ttaagcaacc gcaccgtcgc cggcaacgtt gcctttccac tggaaatcgc
     4981 cggatggccg tctgaaaaaa tcaaagcgcg cgttgccgag tgcctcgaaa tcgtcggctt
     5041 gaccgaacgc gccggccact accccgccca gctttcaggc gggcagaaac aacgcgtcgg
     5101 aatcgcccgc gcgctcgcgc ccaagccgca agtcatcctc gccgacgaac ccacttccgc
     5161 cctcgacccc gccaccacgc gcagtgtctt ggaatgtttg gaagacatca acaaacgctt
     5221 caacgttacc atcgtcatcg taacccacga aatgagcgtc atcagacgat tgtgcgaccg
     5281 cgccgccctg ttggataaag ggaaagtggt ggaaatcgtc gaagtacgcg gcaaccaaat
     5341 ccacgctcaa tccgaaatcg ggcgcgaact gattcgggag gactgatatg gcaggcttaa
     5401 cattcgaaca agccgtttcc accatcgtcg gcatgaaaga cgaaatcgtc cgcgccttgg
     5461 gcgaaacttt cgtgatggtc ggcttgtcca ccacattcgc cgtcatcttc ggcacgctct
     5521 tgggcgtgtt gctcttcgta acttccagcc gccaactgca ttacaacaag ccggtaaact
     5581 tcctgctcga caacctcgtc aacctcatgc gcgccttccc cttcgtcatc ctgatgattg
     5641 cgatgatacc cgccacacgc gccatcgtcg gcagcaccat cggcccggtt gccgcctcgc
     5701 tggtgttgag cgtgtcggga ttgttttatt ttgcccgact ggtggaacaa aacctgcgcg
     5761 aagtcccaaa aggtgtgatt gaagccgccg ccgcgatggg tgcgccgccg attgccatcg
     5821 tcctcaaagt cctcttgaac gaagcgcgcg cgggcatggt ttccagcatt accgtgcttg
     5881 ccatcgggct tttgtcatac agcgcggcgg caggcatgat aggcggcggc ggcttgggcg
     5941 acctcgccat ccgctacggc tactaccgct accaaaccga agtcatcgtc ttcatcgtcg
     6001 ccctcctcgt gctgctggtc atcctgattc aaagcaccgg caacgcgttg gcgcggaaac
     6061 tcgacaaacg ttaaacccga atgccgtctg aacgccaaaa accccgccgc tatccgaaaa
     6121 atgctataaa atccccctgt tcgcggcaaa tgccgtctga acgccgaatc cggacggcag
     6181 gactccctgc ctgtcatttt tgtttgaaac cgccacaaca tcaggagaaa atatgaaaac
     6241 cttcttcaaa accctttccg ccgccgcact cgcgctcatc ctcgcagcct gcggcggtca
     6301 aaaagacagc gcgcccgcag cctctgccgc cgccccttct gccgataacg gcgcggcgaa
     6361 aaaagaaatc gtcttcggca cgaccgtcgg cgacttcggc gatatggtca aagaacaaat
     6421 ccaagccgag ctggagaaaa aaggctacac cgtcaaattg gtcgaattta ccgactatgt
     6481 gcgcccgaat ctggcattgg cggagggcga gttggacatc aacgtcttcc aacacaaacc
     6541 ctatcttgac gatttcaaaa aagaacacaa cctggacatc accgaagcct tccaagtgcc
     6601 gaccgcgcct ttgggactgt atccgggcaa actgaaatcg ctggaagaag tcaaagacgg
     6661 cagcaccgta tccgcgccca acgacccgtc caacttcgca cgcgccttgg tgatgctgaa
     6721 cgaactgggt tggatcaaac tcaaagacgg catcaatccg ctgaccgcat ccaaagccga
     6781 tatcgcggaa aacctgaaaa acatcaaaat cgtcgagctt gaagccgcac aactgccgcg
     6841 cagccgcgcc gacgtggatt ttgccgtcgt caacggcaac tacgccataa gcagcggcat
     6901 gaagctgacc gaagccctgt tccaagagcc gagctttgcc tatgtcaact ggtctgccgt
     6961 caaaaccgcc gacaaagaca gccaatggct taaagacgta accgaggcct ataactccga
     7021 cgcgttcaaa gcctacgcgc acaaacgctt cgagggctac aaataccctg ccgcatggaa
     7081 tgaaggcgca gccaaataag gcagtcgtat aaaatgatgc cgtctgaacc gcattccgtg
     7141 ttcagacggc atttttgtcc tttaatccgc cattccctgc cattccgcta aatccggcgt
     7201 atcgattccg aacagcgaca gcgtgtgtgc gatactgtgc gccactatgt cgtccgccgt
     7261 ctgcggcttg cggtacatcg caggaacagg gggaaacacc acgccgccca tttccgttac
     7321 ccgcttcata ttgtccaaat gggcaaggtt cagcggcgtt tcgcgcacca tcagcaccag
     7381 ccgccgcctt tccttcaaaa ccacatccgc cgcacgcgtc aagagattgt cgccgaagcc
     7441 gtgcgcgaca gaggcaagcg tccgcatcga acagggtgcg accagcatcc cgtccgtttt
     7501 aaacgtaccg ctggcaatgc acgccccgat attgccgatc ggatggacga aatcagccaa
     7561 ggcatatact tcgtctttcg tataatccgt ttccgaagcg cgcgccatct ccgcgccttt
     7621 cgataccaca aggtgcgttt cgacatcttg cgcgcgcaaa agttccaaag ccttcacgcc
     7681 gtattggaaa ccgctcgccc cgctgatgcc gattatcaaa cgccgtacca tcatccgcct
     7741 ttcccataaa accgcctgca acggcaaacc ggctattata gtgaaaaaac agaaatccga
     7801 taaacacgga tacaaattgt cggcaacacc caatatccga taaaataccc gatttaacat
     7861 cctatctgaa taggcacggg agggcggtat ggcaaaagta aaaggcggat tggggcgcgg
     7921 cttggattcg ctgctcgcca acggtgcgga caacagcagc ggcgaccggt tgactgcggt
     7981 tgcggttaaa gatatccggc ccggccgcta tcaggcgcgc gtccaaatcg atgacgaagc
     8041 cttgcaggaa ctggcagatt cgattaaggc gcaaggcgtg atacagcccg tcatcgtgcg
     8101 cgaacacgga ctgtcccgat acgaactgat tgcaggcgaa cgccgttggc gcgccgctca
     8161 gattgccggc ctgtccgaaa tccccgccgt tatcaaaacc atcagcgacg aaaccgcatt
     8221 ggcaatgggt ttgatcgaaa acctccagcg cgaaaacctc aaccccatcg aagaagcaca
     8281 aggcttgaaa cgccttgccg acgagttcgg gctgacccac gaaaccatcg cccaagccgt
     8341 cggcaaaagc cgaagcgcga tttccaacag cctgcgcctt ttaagcctgc ccgaatccgt
     8401 gcaggaaatg ctttaccaac gccgcctcga aatggggcac gcccgcgcac tgctgaccct
     8461 gcccgtcgtc gaacagctcg aattggcgca aaaggccgtc aaaaacggct ggtcggtgcg
     8521 cgaagtcgaa cgccgcagcc aggccgccct tcaaaacaaa cgtcccgagc caaaaaaaac
     8581 tgccgccgcc gacatcggcc gcctgaatga tttgctgact gaaaaattgg gtgtcaacgc
     8641 cgaaatcaag accgccaacc ataaaaaagg caaaatcatc ctgcatttcg acacgcccga
     8701 aaccttcgac catatcttga agcagttggg catagattac cggccttaat tttgcgggat
     8761 atgccgtttg aaatatagag aatagctttc cagattttaa gtgggaaata taattctatt
     8821 gacatttttt ctgcttcgcg taagaatcgt tttcctgttt tcatttttaa ttttcgagga
     8881 aattatgaac acacgcatca actttacgca actgtgggta agcgcgtgag ccaatgctat
     8941 gttaccagtg taatcagcac aatcggcgtt accacttccg atgcaatttg ttcgggaggc
     9001 ggaacgaaca aagccaaaag tcaatgcaat gctttgctta aagcggcagg ccgctgctaa
     9061 tcctttattc ggaaaaggtc gtctgaaaat attttcagac gaccttttat ttattgagca
     9121 aactccccaa actgccgaca atccgaccga taaactacta caatttcgcg ttgatttttt
     9181 attatttcca cgtaaagcaa acaaatcacg taagaacatt aaaagtgtaa agaaattgcg
     9241 gacaaactcc ttaatatcct gtaatcatat gtaatatgtg ttagaatagc ggagttggat
     9301 tttggggagt cgctcgtctg tatcggcggc gagtttcaca aagattaaca tattgcttga
     9361 cgtaataagg cttctaaatt atattagccg cgccccaaac ctgaggcgga aacattccct
     9421 ttatgaagca gattatcatc ctacaatccg ccgtattgtc catatgcgcc gcagttgcct
     9481 ttgccgtatg gggttttgcc ggattccttt cggcggtcgg gggcggtttg tcctacctgc
     9541 ttcccacgtt tgttgcagtt ttacttctaa aacttttcag gggaaacccc ttcctgcaaa
     9601 gcaggatgtt cgtcttcgga gagattttaa aagtagtgct gtcgctgttg tccatgcttg
     9661 ccgtatttgc aatatggcat caatcgctgg tgttcgtccc gtttttgatg gggctgctcg
     9721 gtgtcagcca tctggttttt ttagtattgt tgagagtgaa agattatggc aggtgaaacc
     9781 attaccgctg ccgactacat caagcaccac ttgcagagct tgaccagttt gtcggatgtt
     9841 actcagggtc agggactgaa aaacattgct gatttttcgt ttattaacct tgatgccgtt
     9901 ttttttgccg tcctgttggg cgtaatcggc agcttcctgt tgtggcgcgg tgcaaaaaaa
     9961 gcaacggcag gcgttcccgg acgtttccag gccgccgtgg aaatcttgtt cgagtttgtg
    10021 gacgatatgt gtaagagcat cattcacagc gaaaagtcta gaaaagccgt cgcgccgttg
    10081 ggtctgacgc tgtttgtttg gattttcctg atgaacgcga tggatatgct gccggtcgat
    10141 ttgctgccga tggtatggca gggcattacc ggcaaccatc acgccctgct gcgcatcgta
    10201 ccgactgccg atttgaacac cgctttggca ctcgctgtcg gcgtgttgct gatttgtatc
    10261 tattacaaca tcaaaatcaa aggattgggc ggctggtttc acgagttgtt cagtgcgccg
    10321 ttcggtgcaa aactcgcacc tgcgaacttt ctgttgaact tggtcgagtt tctttctaaa
    10381 accgtatccc acggtatgcg gttgttcggc aatatgtatg cgggcgagct ggtattcctg
    10441 ctgatagcct tgcttggcgg tgcttgggcg gcttccggca gcgttgaagt catggatccg
    10501 attctgtttg tattccacat tattgccggt ttggcatggg cgattttcca tattttggtg
    10561 attaccctgc aggcatttat tttcatggcg ttggcgttcg tctatatcgg gcaggcgcac
    10621 gatgcccact gattttccca agtagtttgt ttttgtagtt taacctttgt ttctttaagg
    10681 agtttaaaat gggtttgatt gctatcgcat gtggtttgat cgttgcattg ggtgcattgg
    10741 gtgcatctat cggtatcgca atggtcggtt ctaaatattt ggagtcttct gctcgccaac
    10801 ctgaactgat tggtccgctg caaaccaaac tgttcctgat tgccggtctg attgatgccg
    10861 cattcttgat cggtgtcgcc attgcactac tgttcgcctt cgtcaacccg tttgcaggtg
    10921 cataatcagg acggattcgt ccgttcgtac aggtgcagcc tgtttgatta accccaatac
    10981 gaaggttaag taacgtgaat atcaatgcaa cattattcgc tcaaatcatc gtctttttcg
    11041 gtttggtatg gtttaccatg aaatttgtgt ggccgccgat tgcaaaagct ttggatgagc
    11101 gtgccgcaaa aatcgccgag ggcttggctg ccgccgagcg tggtaaaagc gatttcgagc
    11161 aggctgaaaa aaaggttgca gaacttttgg cagaagggcg taatcaggtt tccgaaatgg
    11221 ttgccaacgc cgaaaaacgt gccgccaaaa ttgtcgaaga agccaaagaa caggcttctt
    11281 ccgaggcggc gcgcattgca gctcaggcaa aggccgatgt ggagcaggaa ttgttccgcg
    11341 cacgcgaatc cctgcgcgat caggttgccg tgttggctgt caaaggtgcc gaatctattt
    11401 tgcgcagcga agtcgatgct tccaaacacg caaaactgct cgataccctg aaacaggagt
    11461 tgtaatctta tggcagagtt tgcaacgatc gccagacctt atgcaaaggc attgttcggt
    11521 ctggctcagg aaaaaaacca aattgagtct tggttgggcg gactggaaaa acttgcggcg
    11581 gttgttcagg aagggaaggt ggctttattg attgaccgtc ctgaaacgaa tgcttcagaa
    11641 aaagcagata tcctcatcga tttggtcggt ttgaaagaca aggagttaaa aaactttgtt
    11701 atcgtcttgg ccgggcagaa acgtttgtcg atattgccgg aagtgtatgc tcaatatcaa
    11761 gacttgacct tatcattcaa ccatatcaaa tctgccgtca tttacagtgc ctatccgttg
    11821 accgacaaac aggtcggcga gttggcgcaa atgctgaata agcgtttcga cagcgagctg
    11881 aaaatctctg tcgaaatcga accggagctg attggcggca taaaagttga agtgggtgat
    11941 caggttttgg atttgtctgt acaaggcaaa ctgagtgctt tgtacacgac tatgacgaat
    12001 taggagagtt ttcatgcagc ttaatcctgc tgaaattagc gatctgatta aagccaagat
    12061 cgaaaatctg tctgtaaatg ccgaagtgag tacccgtggt acggtgattt cggtaactga
    12121 cggtatcgtt cgcatccatg gtttgtcaga tgcaatgcaa ggtgagatgc tcgaattccc
    12181 gggtaacact ttaggcttgg cgatgaacct ggagcgcgac tccgtcggtg ccgtagtgtt
    12241 gggcgagtac gaacatatta aagaaggcga cacggttacc tgtaccggcc gtattttaga
    12301 agtgccggtc ggacgcgaat tggtcggacg cgtcgtcgat gcattgggtc ggcctatcga
    12361 cggcaaaggc ccgattaata caactttgac cgcccctgtc gaaaaaatcg caccgggcgt
    12421 gattgcacgc aaatcggttg atcagccgat gcaaaccggt ctgaaggcga ttgactctat
    12481 gattcctgtc ggtcgcggtc agcgtgagtt gattattgga gaccgtcaga caggtaaaac
    12541 ggccgtggca ttggatgcca tcgtcaacca aaaaggtacg ggtgttatct gtatctatgt
    12601 cgctatcggt caaaaagcat cttctattgc caacgtggtc cgcaaattgg aagagcatgg
    12661 cgcgatggaa cacacgattg tggttgctgc aactgcatct gaagcggcgg cattgcaata
    12721 tatcgcacct tattcaggtt gtacgatggg tgaattcttc cgcgatcgtg gcgaagatgc
    12781 cttgattgtt tatgacgatt tgtccaaaca ggctgtggct taccgtcaaa tttccctgct
    12841 tttgcgccgt ccgcccggcc gcgaagccta tcccggcgat gtgttctacc tgcactcccg
    12901 tctgttggaa cgtgcggcac gtgtcaatga acacgaagtg gaaaaattga ccaacggcga
    12961 agtaaaaggc aaaaccggtt ctctgaccgc gttgccgatt atcgaaaccc aagcgggcga
    13021 cgtatctgct ttcgttccga ctaacgtcat ttcgattacc gacggtcaga ttttcttgga
    13081 aaccgacctc ttcaacgccg gtatccgtcc tgcaatcaat gccggtattt ccgtatcccg
    13141 cgtaggcggt gctgcacaaa ccaaagtgat taaaaagctg ggtggcggta tccgtttggc
    13201 gttggcacaa tatcgtgaat tggcggcgtt ctcgcaattt gcatccgatt tggatgaagc
    13261 tacgcgcaaa cagttggagc atggcgaagt cgtaaccgaa ctgatgaaac agaaacagtt
    13321 cagtacgttg aatacggctg aaatggcttt gaccctttgg gcaatcaaca acggttcgta
    13381 ttctgatgtt ccggttgcca aagctctagc ttttgaatct gaatttttga gctttgtccg
    13441 tacccaacat ccggaagttt tggaagccgt caatgcttca ggtgcaatgt ccgacgagag
    13501 cgagaaaacg cttgaagcag ccatgaaatc cttcaaatct tcttacgcct atcaggcata
    13561 aggcttgaag tgaaaggagt ctgaaatggc agtaggaaaa gagattctca ccaaaatccg
    13621 cagtgttcag aatacccaaa agatcactaa agcgatgcaa atggtgtcaa cctctaaaat
    13681 gcggaagact caggaacgga tgcgtttggc gcgtccgtat gccgaaaaag tgcgtatggt
    13741 gatgagccat cttgcgcaaa ccaataccga tcatggtatt ccgttactgg aatctcatcg
    13801 ggaaatcaga cgtgtcggtt ttattttgat tacgtctgat aagggtttgt gtggcggttt
    13861 gaacgccaac gtgctgaaaa agtttttggc acaagttcaa gagtatcgga atcaaggtat
    13921 tgaagaggaa atcgtatgcc ttggcagtaa aggtctgatg gcgtgtcaga gcattggtct
    13981 gaatgtggtt gccagtgccg taaatttggg cgatacccca aaaatggaaa tgctgctcgg
    14041 acctttgaca gaacttttcc aacggtatga gaaacatgaa attgacaaaa tccatctggt
    14101 gtattcgggt tttgtcaata ccatgcgtca agaaccgagg atggaagtat tgctgcctat
    14161 cggtgagaac gtgattggcg attcagctcc caaaccaccg ttcagctggg aataccgcta
    14221 cgaaccgact gcacttgcag tgttggaata tctggttcgc cgctatttag agtctgtggt
    14281 ttatcaggcg ttgagcgaca atatggcatc cgaacaggca gcccgcatgg ttgccatgaa
    14341 agctgcaaca gacaatgcag gcaatgccat caaagagttg cgtctggtat ataacaaatc
    14401 gcgtcaagct gcgattacca cggaattgtc agaaattgta gcaggtgcgg cggccgtctg
    14461 atgccgtctg aatcctgtac ggaaattagg atacgataat gagccaaggc aaaatcgtac
    14521 aaattatcgg tgcggttgtt gacgtggaat ttccacgcga catgattccg cgcgtttacg
    14581 acgctttgaa attagacgaa aacggtctga ctttggaagt ccaacagctt ttgggtgatg
    14641 gcgtagtccg taccatcgct atgggcagct cggacggttt gaaacgcggc atgactgtga
    14701 gcgatactgg ttcgcccatt actgtgccgg taggtaaagg tacgttggga cgcattgtcg
    14761 atgtattggg aacgcctgtt gacgaggcag gtccaattga taccgacaag agtcgtgcca
    14821 tccaccaagc cgctcctaag tttgacgaac tgtcttccac aaccgaattg ctcgaaacgg
    14881 gcattaaagt gattgacttg ctgtgtccgt ttgccaaagg cggtaaagta ggtctgttcg
    14941 gcggtgccgg tgtgggtaaa accgtgaaca tgatggaatt gatcaacaac atcgccaaag
    15001 cgcacagcgg cttgtccgtg ttctcaggcg tgggtgagcg tacccgcgaa ggtaacgact
    15061 tctaccacga gatgaaagat tccaacgtat tggataaagt agccatggtg tatggccaaa
    15121 tgaacgaacc tccaggcaac cgtctgcgcg ttgctttgac cggtttgact atggctgaat
    15181 acttccgtga cgaaaaagac gaaaacggta aaggtcgtga cgtattgttc ttcgttgaca
    15241 acatctaccg ttacactctg gccggtaccg aagtatccgc actgttgggc cgtatgcctt
    15301 ctgcagtggg ttaccaaccg acattggctg aagaaatggg tcgtttgcaa gagcgtatta
    15361 cctctaccca aaccggttcc attacttcca tccaagccgt atatgtacct gcggatgact
    15421 tgactgaccc gtctccggcg acaactttcg cccacttgga cgcgaccgtc gtattgagcc
    15481 gtgatattgc ctctttgggt atttacccgg cagttgaccc gcttgactct acttcgcgcc
    15541 aattggatcc gatggtattg ggtcaagagc actacgacgt agcgcgcggt gtacagtcta
    15601 ctctgcaaaa atacaaagaa ttgcgcgaca tcatcgccat tctgggtatg gacgaattgt
    15661 ctgacgaaga caaactggct gtaatgcgtg cccgtaaaat ccaacgcttc ctgtctcaac
    15721 cgttccacgt tgccgaagtg tttacaggtt ctccaggcaa atatgtcgcc ctgcgcgata
    15781 ccattgccgg cttcaaagcc atcttgaacg gcgaatacga tcatctgccc gaacaggcat
    15841 tctatatggt cggcagcatc gaagaagcgg ttgagaaagc gaaaacctta aactgaggag
    15901 gtcggcatga gcatcatgca agttgaggtg gtaagtggcg agcagaaaat ctattcaggc
    15961 gaggcaacat ttatcgttgt tccgactgta cagggcgaac tcggtattta tccgcgacac
    16021 gagccgatta tgagtttggt gcggccgggg gctttgcgtt tgaccgttcc gggcgaggat
    16081 aaagaggttt tggttgctgt ttccggcggt attttggaag tacagcctga taaagtaact
    16141 gtcttggcgg atgttgccgt ccgcagtgcg gaaatggatc gggcacgtgc ggaagaggcg
    16201 aaaaaagccg cagaagcggg catttcccaa gctaaagacg ataaggcttt ggcggaagca
    16261 cataaagcat tggctgctgc gattgcgcag ctcaaaactt tggactatat ccgttcgcac
    16321 aagaaataaa cttgtttggt ttgaaaaagc acgaccgttt ggccgtgctt tttattttcc
    16381 ggatttaaat taaaaaatta tccatcccct ggtttcaaat caggctgtct tcgagataaa
    16441 tctattcaag cggctatgga aacagtaaaa taaaaccttt attttatcga acaataagcc
    16501 atgcttacct tccaacaaat catcttcaaa ctgcaaacct tctgggcaga caaaggctgc
    16561 accgtcatcc aacccttcga catggaagtc ggtgccggca catcccatcc cgccacctgc
    16621 ctgcgcgcgc tcggccccga gccttggttt gccgcctacg tccaacccag ccgccgcccc
    16681 aaagacggcc gctacggcga caaccccaac cgcctgcaac actattacca attccaagtc
    16741 gccctcaaac ccgcccccgc caatatccaa gacctctatc tcgactccct gcgcgaattg
    16801 ggcatcgatc ccaaagtcca cgacatccgc tttgtcgaag acgactggga aaaccccacc
    16861 ctcggtgcgt ggggtttggg ctgggaagtc tggctcaacg gcatggaagt aacccagttt
    16921 acctatttcc aacaagtcgg cggtatcgat tgcacgcccg tactcggcga aattacctac
    16981 ggcatcgaac gcttggcgat gtacctgcaa ggcgtggaaa acgtctatga cctcgtttgg
    17041 gcaaaaacgc cggacggcaa taccgtaagc tacggcgacg tgtaccatca aaacgaagtc
    17101 gagcaatcta cctacaactt cgaatacagc gatgccgact ggctgctgcg ccagttcaac
    17161 gactacgaag cgcaagccaa acgcctgttc gccgaagaaa acgccgacct tgccttacct
    17221 gcctacgagc tggtcctcaa agcggggcat acattcaacc ttttagacgc acgcggcgcg
    17281 atttccgtaa ccgagcgggc aacttatatt ggacgtattc gtgcattgag ccgcgccgtg
    17341 gcgcaaaaat atatcgaaag ccgtgagaaa ctgggcttcc cgttgattaa aaaataacga
    17401 tacgtcgtct gaagcaggtt ttcaggcgac ctttattgcg tatccattaa tacaggccgt
    17461 acggcatatg caggctttat aagcatggcc tacggacaaa cagaaagtct cacatgacaa
    17521 cccaaaccct tttaatcgaa ctccttaccg aagaactccc gccaaaagcc ctgaataatc
    17581 tgggcaacca ttttgccgct tccgttgccg aaggcttgga aaaagcgcaa ctggttgacg
    17641 gcgcggccga atttacggct tatgcctcgc cgcgccgttt ggcggttcaa gtcaaaaacg
    17701 tcaaagctgt tcaggccgat cagaaaatcg tgaaaaaagg ccctgccgtg gcgaatgccg
    17761 taaaagacgg tacgccgacc aaggctttgg aaggttttgc gcgcggggcg ggggcgaaaa
    17821 tcgaagacct gaccatcatc cacgacggca ggcaggacgt gtacgcctac gaatacgtcc
    17881 aaaccggcag accgttgggc ggacttttgg aagacattat caatcaagct gttaagaagc
    17941 tgccgattcc gaaagtaatg cgttggggca gcagcacgtt taccttcgtg cgccctgttc
    18001 acgggctgat tgtgctgcac ggcggcgatg tcgtgaacgt cagcgttttg ggcctgcaaa
    18061 gcggcaatca aaccttggga caccgctttc tttccgacgg cgaaatgatc attgaaaacg
    18121 ccgacagcta cgccgcacaa atgcgcgggc aaggcaaagt cgtcgcttcg tttgccgggc
    18181 gcaaagccgc gattcagacg gcattggaag ggcaggcacg ccgtctgaac gcgaccgttg
    18241 ccgccgatga agccctgttg gacgaagtga ccgcgctggt cgaatggcct gttgttttgg
    18301 aagccggttt tgaggaacac ttcctcgccg tgcctcaaga atgcttgatt ttgacgatgc
    18361 agcaaaacca aaaatacttc ccgctgctcg accaaaacgg caagctgatg aaccgcttcc
    18421 tgctggtttc caacctgcaa accgaagacc cgtcgcacat catccgaggc aacgaacgcg
    18481 tattgcgcgc gcgcctgtct gatgccgagt tcttctacaa acaagaccaa aaagcgacct
    18541 tggaaagccg cctgcccaag ctggcgaacg tggtgtacca caacaaaatc ggttcgcagg
    18601 ccgaacgcat cgaacgcctg caaagcatcg ccgcccacat cgccaaagca ttgggcgcgg
    18661 atgccgcggc agccgagcgc gccgcgcgtc ttgccaaagc cgacttggta actgaaatgg
    18721 tcggcgagtt ccccgaactg caaggcacga tgggcaaata ctacgcccgc ttggacggcg
    18781 aaaccgaaga aatcgccgaa gctattgagc aacactacca accgcgtttt gccggcgaca
    18841 agctgcccga aagcaaaatt gccgccgccg tggcacttgc cgacaaactg gaaaccctgg
    18901 tcggcatttg gggcatcggt ttgattccta ccggcgacaa agacccctac gccctgcgcc
    18961 gcgccgcctt gggtattttg cggatgctga tgcagtacgg tttggacgtg aacgaactga
    19021 ttcagacggc attcgacagc ttcccgcaag gtttgctcaa cgagaaaacg ccgtctgaaa
    19081 ccgccgactt tatgcaggcg cgccttgccg tgttgctgca aaacgattat ccgcaagaca
    19141 tcgttgccgc cgtactcgcc aaacagccgc gccgtttgga cgatttgacc gccaaactgc
    19201 aagccgtcgc cgtattcaaa caactgcccg aagccgccgc gctcgccgcc gccaacaaac
    19261 gcgtgcaaaa cctgctgaaa aaagccgatg ccgcgttggg cgaagtcaat gaaagcctgc
    19321 tgcaacagga cgaagaaaaa gccctgtacg ctgccgcgca aggtttgcag ccgaaaattg
    19381 ccgccgccgt cgccgaaggc aatttccgaa ccgccttgtc cgaactggct tccgtcaagc
    19441 cgcaggttga tgccttcttc gacggcgtga tggtgatggc ggaagatgcc gccgtaaaac
    19501 aaaaccgcct gaacctgctg aaccgcttgg cagagcagat gaacgcggtg gccgacatcg
    19561 cgcttttggg cgagtaaccg ttgtacagtc caaatgccgt ctgaagcctt caggcggcat
    19621 caaattatcg ggagagtaaa ttgcagcctt tagtcagcgt attgatttgc gcctacaacg
    19681 tagaaaaata ttttgcccaa tcattagccg ccgtcgtgaa tcagacttgg cgcaacttgg
    19741 atattttgat tgtcgatgac ggctcgacag acggcacact tgccatcgca cggcgttttc
    19801 aagaacagga cggccgcatc cgcatcctcg cgcagccgcg caattccggc ctgatt
//
LOCUS       DAWXHA010000029        19321 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.029, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000029 DAWXHA010000000
VERSION     DAWXHA010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19321
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.029"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..369)
                     /locus_tag="AABD07_000785"
     CDS             complement(<1..369)
                     /locus_tag="AABD07_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2355359.1"
                     /translation="MPVFECGKQRVFIRQPAAPAIDQNRTRLHLPQFVFAGHYPNNGK
                     WPANNGDAGVASSSSIIGKYVESVTVTNGVVTAKMKSDGVNKEIQGKKLSLWAKRENG
                     SVKWFCGQPVQRGAGADTVTD"
     gene            262..570
                     /locus_tag="AABD07_000786"
                     /pseudo
     CDS             262..570
                     /locus_tag="AABD07_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
     gene            complement(645..2699)
                     /gene="metG"
                     /locus_tag="AABD07_000787"
     CDS             complement(645..2699)
                     /gene="metG"
                     /locus_tag="AABD07_000787"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HFB2355360.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELFNPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGGETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRPKDVSGSALLAKLAAESDTIAEQYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAAN
                     AARFLNLDAITWKNTRETLGEHAINKYEHLMQRVEQKQVDDLIEANKQSIQTASAPVE
                     EGKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIAA
                     SYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGDK
                     VG"
     gene            complement(2815..4653)
                     /gene="glmS"
                     /locus_tag="AABD07_000788"
     CDS             complement(2815..4653)
                     /gene="glmS"
                     /locus_tag="AABD07_000788"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HFB2355361.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVYSDGKIK
                     RVRRVGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGKLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSPASLEPGPHSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSVCNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVVLFGLAVTLAKVRGVVSGEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNAAEGVHVI
                     RAPRHVGELSPVVHTVPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            4927..5433
                     /locus_tag="AABD07_000789"
                     /pseudo
     CDS             4927..5433
                     /locus_tag="AABD07_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224225.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5737..7062)
                     /locus_tag="AABD07_000790"
     CDS             complement(5737..7062)
                     /locus_tag="AABD07_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HFB2355362.1"
                     /translation="MKKHLLRSALYGIAAAILAACQSRSIQTFPQPDTSVINGPDRPA
                     GIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIY
                     GIPDDFISVPLPAGLRGGKALVRIRQTGKNSGTIDNAGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPHKLAEVLGQNPSYIFF
                     RELAGSGNEGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            7295..8115
                     /locus_tag="AABD07_000791"
                     /pseudo
     CDS             7295..8115
                     /locus_tag="AABD07_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003789724.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
     gene            8112..9278
                     /gene="efeO"
                     /locus_tag="AABD07_000792"
     CDS             8112..9278
                     /gene="efeO"
                     /locus_tag="AABD07_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HFB2355363.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGETQSANEGGS
                     VGIAVNDNACEPMNLTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVADSGFKDTANEADLEKLPQPLADYKAYVQGEV
                     KELAAKTKTFTEAVKVGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDACEDDFK
                     DGAKDAGFTGFHRIEHALWVEKDVSGVKETAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEAAGSKISGEEDRYSHTDLSDFQANADGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLSEADRKALQAPINALAEDLAQLRGILGLK"
     gene            9587..10852
                     /gene="efeB"
                     /locus_tag="AABD07_000793"
     CDS             9587..10852
                     /gene="efeB"
                     /locus_tag="AABD07_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HFB2355364.1"
                     /translation="MSQNQPAQPTKRNLFKTALAVGAIGAIGGYFGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPRQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPSAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKTVHLQEMRD
                     FPNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTAQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRRF
                     VEFWGRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGDITPKDSHMRLANPR
                     DPEFLKKHCLFRRAYSYSRGPASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVGKGGFLGQGLPGV"
     gene            complement(10924..11253)
                     /locus_tag="AABD07_000794"
     CDS             complement(10924..11253)
                     /locus_tag="AABD07_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HFB2355365.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVR
                     DANGAALQNGDTVILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(11328..12698)
                     /gene="glmU"
                     /locus_tag="AABD07_000795"
     CDS             complement(11328..12698)
                     /gene="glmU"
                     /locus_tag="AABD07_000795"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003747676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase"
                     /protein_id="HFB2355366.1"
                     /translation="MPQNTLNTVILAAGKGTRMYSQMPKVLHCIGGKPMVERVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDAVWVEQTEQLGTGHAVKTALPHLASEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPTGLGRIIRDGSGSVTAIVEEKDASAT
                     QKTIREINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVRPVRVRA
                     SHLAAGVNNKRQLAKLERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVN
                     VVIEGEVELGDNVEIGANCVIKNAKIGANSKIAPFSHLEGCEVGENNRIGPYARLRPQ
                     AKLADNVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNIEDNKLALARARQTVIEGWMR
                     PEKDKQ"
     gene            complement(12753..13028)
                     /locus_tag="AABD07_000796"
     CDS             complement(12753..13028)
                     /locus_tag="AABD07_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HFB2355367.1"
                     /translation="MRKTFLILMTPAALFLSGCAWETYQDGNGKTAVRQKYPAGTPVY
                     YQDGSYSKNMNYNQYRPERRAVLPDQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(13021..13734)
                     /locus_tag="AABD07_000797"
     CDS             complement(13021..13734)
                     /locus_tag="AABD07_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HFB2355368.1"
                     /translation="MQENPTVWLFDLDNTLHDADAGIFHLINRAMTRYMARRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTRLHGMADTENTLCR
                     LNGRKAVFSNGPSFYVRAVAGALGLENCFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKSHAPPFIDASVSDMAQLARYAETLSER
                     RQNHYNTRTNPENTKECYA"
     gene            13793..14794
                     /locus_tag="AABD07_000798"
     CDS             13793..14794
                     /locus_tag="AABD07_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2355369.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRDNPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSPEV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            14888..15736
                     /locus_tag="AABD07_000799"
     CDS             14888..15736
                     /locus_tag="AABD07_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HFB2355370.1"
                     /translation="MDFKQFDFLHLISVSGWGHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSSLPLCRAQVIVGVDYNCDLKVAKEAVLKAAAEHPLSVQN
                     EERQPAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            15763..16245
                     /locus_tag="AABD07_000800"
     CDS             15763..16245
                     /locus_tag="AABD07_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HFB2355371.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEYRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLVENGGDAV
                     "
     gene            complement(16329..17897)
                     /gene="msrAB"
                     /locus_tag="AABD07_000801"
     CDS             complement(16329..17897)
                     /gene="msrAB"
                     /locus_tag="AABD07_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HFB2355372.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGTATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLH
                     EKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRNPNADLGSLKHSFYKPDTQKKDSAIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTENPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYYFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKAAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSFNMRRTEVRSRAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKGKVK"
     gene            18043..19296
                     /gene="ftsY"
                     /locus_tag="AABD07_000802"
     CDS             18043..19296
                     /gene="ftsY"
                     /locus_tag="AABD07_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HFB2355373.1"
                     /translation="MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVE
                     SLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAGEAAERVESAKEAVAETVGEAVG
                     QVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
                     GDMGMEATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPF
                     VIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVI
                     SQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGA
                     PHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVR
                     YIGVGEGIDDLRPFDARAFVDALLD"
BASE COUNT         3988 a         4960 c         5910 g         4463 t
ORIGIN      
        1 gtcggtaacg gtgtcggcgc cggcgccgcg ctgaaccggc tgtccgcaga accattttac
       61 cgaaccgttt tcacgcttgg cccacaggga gagttttttg ccttggattt ctttgtttac
      121 gccgtctgat ttcattttgg cggtaacgac gccgtttgtg accgtaacgc tttcaacata
      181 tttgcctatg attgatgaag aagatgccac gccggcatca ccgttgtttg cgggccattt
      241 gccgttattc gggtaatgtc cggcgaaaac gaattgcggc agatgaagcc gggtgcggtt
      301 ttgatcaatt gcgggcgcgg cgggctggcg gatgaaaacg cgctgcttgc cgcactcaaa
      361 tacgggcaga tcggcggggc gggtgtcgat gttttgacgg aggaaccgcc gaggggcggc
      421 aatcccttgc tgaatgcacg attacccaat ctgattgtta cgccgcatac cgcgtgggcg
      481 agccgcgagg ctttggatcg gttgtttgaa atattgttgg cgaacattca cgcctttgtg
      541 aaaggcgagg cgcaaaaccg cgtggtttga acctgtcggg attgcggaaa aaaacgccgt
      601 ctgaacgccc aaggggttca gacggcgttt tttgagattt ctgcctaacc gactttgtcg
      661 cccggctgag cgcccgcatc cacgtcaagc agcttcagtt tgccgtctgc cgtggcggcg
      721 gagaggatca taccttcgga tacgccgaat tttgccattt tgcgcggggc gaagttggcg
      781 actgcgatga ccatgcgacc gttcaattcg gcaggatttg ggtaagacgc ggcgatgccg
      841 gagaagatga tgcgtttttc aaaaccgaaa tcgaggtcga atttcaaaag tttggtgctg
      901 ccttcgacgg cttcgcagtt caatactttg gcgacgcgca tatcgatttt cataaagtcg
      961 tcgaagcttg cctgttcggc gactttttcg tatttaccct cttcaacggg cgcggatgcc
     1021 gtctgaatgc tttgtttgtt ggcttcgatc aaatcgtcca cttgtttttg ctccactcgt
     1081 tgcattaaat gttcgtattt gttgatggcg tgttcgccta gggtttcgcg cgtgttcttc
     1141 caggtaatcg cgtccagatt gaggaaacgc gcggcgttgg cggcggtttg cggcaacacg
     1201 ggggcgaggt aggcggtcag catggtgaag gcgttgatga gttcgctgca tacttcgtgc
     1261 aggcgttcgt cttgaccttc ttgtttggcg agctcccacg gtttgttggc atcgacgtat
     1321 tcgttgacaa tgtctgccaa tgccatgatg tcgcgcaggg cgcgggcgta ttcgcggttt
     1381 tcgtattgct cggcgatggt gtcgctttcg gcggcgagtt ttgccagcaa tgcgctgcct
     1441 gaaacgtctt tcggacgacc ttcaaagcgt ttggcgatga aacccgaagc gcgggcggcg
     1501 atgttgacgt atttgccgac aaggtcgctg ttgacgcgcg aaataaagtc ttgcaggttc
     1561 aaatcgatgt cttcgatttt gctgttgagc ttggcggcga tgtagtagcg catccactcg
     1621 gggttcaggc cttgttccaa ataggatttg gcggtgatga aggtgccgcg cgatttggac
     1681 attttttgtc cgtccacggt caaaaagccg tgtgcgtaca cgccggtcgg ggcgcggtgg
     1741 ccggagaaat gcagcatggc cggccagaac agggcgtgga aatagaggat gtctttgccg
     1801 atgaagtggt acatctcggt ttggctgccg gctttgaagt attcgtcaaa atcgatgccg
     1861 atgcggtcgc acaggttttt aaacgatgcc atgtagccga cgggcgcgtc gagccagacg
     1921 tagaagtatt tgcccggcgc gtcggggatt tcaaaaccga aatacggcgc gtcgcgggaa
     1981 atgtcccagt cggacagggt ggtttctccg ccttcgccca gccattcctt cattttgttg
     2041 agggcttcgg gttgcagatg gggcttgccg tcgtgcgggt tgttgccgga agtccatgct
     2101 ttgaggaagt cggcgcattc gcccagtttg aagaagaagt gttcggattc gcgcaattcg
     2161 ggtttcgcgc cggaaacggc ggaatacggg ttgaacagtt cggtcgggga ataggtcgtg
     2221 ccgcagactt cgcagttgtc gccgtattgg tcttgggcgt ggcatttcgg gcattcgcct
     2281 ttgacgaagc ggtcgggcag gaacatttgt ttttcggggt cgaaaagctg ctcgatgacg
     2341 cggctttcga ttttgccgtt ggctttcagc gcgcggtaaa tgtcttggga aaactgtttg
     2401 ttttcagtgg aatgggtgct gtaataattg tcgtagccga tgaaaaagcc ggtaaagtcg
     2461 gcaaggtgct ctttgcgcac tttggcaatc atgtcttcgg gcgcgatgcc ttgtttttgc
     2521 gcggcaagca taacgggcgt gccgtgggtg tcgtcggcgc agcagtagta gcattcgtgg
     2581 ccgcgcagtt tttgaaagcg cacccaaacg tcggtttgga tgtgttcgac catgtggccg
     2641 aggtggatgc tgccgttggc atagggcagg gcggaggtaa ctaagatttt gcgtgtcata
     2701 ttgtgctttg caaacaatgg gtaaaggcgg attataccgc aaatcaaacg gggaaatgcc
     2761 gtctgaagcc tgaaaaatcg ggcttcagac ggcatttttg ccaaccggcg ggatttattc
     2821 gacggttacg gatttcgcca ggttgcgcgg cttgtccaca tccgtgccgc gcgcgagggc
     2881 ggtgtggtag gcgaggagct gcacggggac ggtatgcacg acgggggaca gttcgccgac
     2941 gtggcgaggt gcgcggataa cgtgcacgcc ttcggcggca ttaaaattgc tgtcgaggtc
     3001 ggcaaagacg aaaagttcgc cgccgcgcgc gccgacttcc tgcatattgg ctttgacttt
     3061 gtccaacagg ctgtcgttgg gcgcgatgac gacgacgggc atgttttcgt ccaccaaggc
     3121 aagcggcccg tgtttcagtt cgccggcagg ataggcttcg gcgtggatgt aggtgatttc
     3181 ctttagcttc aacgcacctt caagggcaat cgggtaatgg atgccgcgcc ccaaaaacag
     3241 cgcgctggtt ttcttggcaa actgttgcgc ccaagcggca atttgcggtt cgaggttcaa
     3301 agcgtgctgc acgctgccgg gaagctggcg gagttcttcg gtgtaacgtg cttcatcttc
     3361 gccggatacc acgccgcgca ctttcgccag cgttaccgcc aaaccgaaca gcacgaccag
     3421 ttgcgtggta aatgctttag tcgaggcgac gccgatttcc gcaccggcac gggtataaag
     3481 cacaaggctg ctttcgcgcg gcagggcgga ttccatcacg ttgcagacgg agaggctgtg
     3541 gcggtgtccc aaagatttgg cgtatttcaa agcctccatc gtgtccagcg tttcgccgga
     3601 ttgggaaatg gtaatgacca gttggtcggg gtcggcaatc acgctgcggt accggtattc
     3661 gcttgcgatt tcgacgtcgg ccgggatttt ggcgatggat tccaaccaat atttggcggt
     3721 cagcgcggcg taataggacg tgccgcaggc aaggattttg acgctgcgga tgctttcaaa
     3781 cacgcttttg gcatttttgc cgaagttttc ggggatgaat ccgccgtcga ggaaaacttc
     3841 cgccgtgtcc gcaatcgcgc gcggctgctc gtggatttct ttttgcataa agtggctgtg
     3901 cggacccggt tccaaagagg cgggcgagag ttcggatacc ttgactttgc gttcggcagg
     3961 caggccgttt ttatcggtca gccgtttgat gccgtctgaa gccagcagcg cgatgtcgcc
     4021 gtcttcgagg tacgccacgc ggcgcgtaaa ggcgatgacg gcggatacgt ccgaagcgat
     4081 aaaggtttca tcgtcgccca aagcgaccaa aagcgggcag cccatacgcg ccacaactaa
     4141 ttcatcaggc ttgtcttggg caataaccgc gatggcgtat gcgccgtgga aacgtttgac
     4201 cgcttcctgc acggcttcaa acaatttgcc gccgttttgc gcgtattcgt gattgatgct
     4261 gtgtgcgatg acttcggtat ccgtttgcga ttcaaaccgg tatcccaaac cttccaagcg
     4321 tttgcgttcg ctttcaaagt tttcgatgat gccgttgtgg acgacggcaa tcataccgcc
     4381 gctgatgtgc gggtgggcgt tcggctcggt aacgccgccg tgtgtcgccc agcgcgtatg
     4441 cccgatgccg atgccgccgc tgatgccttt ttcgcgtgcc gcgtcctcca taagctgcac
     4501 gcgtccgacg cggcgcacgc gcttgatttt gccgtctgaa tacacagcaa tgcctgatga
     4561 gtcataaccc cggtattcga ggcgtttgag gccgtcggtc agaaaatcga cgacgttgtg
     4621 atgggcgcgg atggcgccga cgataccgca cataaactgt tccttagtat ccggttgaaa
     4681 aaaaagatgc ggacggcttc cgtaccgcac cttccgtttc ggattataaa ccgcctcccg
     4741 cgccggaaaa cagcaaaatg ccgtctgaag gcttgggctt gctcaaaaaa gggagggatt
     4801 tccccgcctg accgggatgg gcgttcagac ggcattgcct gccgccggtt tatagttttt
     4861 gcaaatcaat attaacaagc tgaaaaaaaa aacaatatac ccgcccggtc ttaatgttaa
     4921 cggagtatgg aaatgaaaca aatgcttttg gccgtcggcg tggcggcggt gttggcgggc
     4981 tgcggcaagg atgccggcgg ttacgagggt tattggcgcg aaaagtcgga caaaaaagag
     5041 ggcgtgattg ccgtcaaaaa agaaaaaggc aattacttcc ttaataaaat caacgtgttt
     5101 acaggcaagg aggagtcttt gcttttgtct gaaaaagacg gcgcgctttc gataaacacg
     5161 gggatagggg aaatcccgat caaactttcc gacgacggga aagagctgta tgtcgaacgc
     5221 aggcggtatg tgaaaaccga tgcggcgatg aaggacaaaa tcatcgccca ccagaaaaag
     5281 tgcggacaaa cggcacaggc atacctcgac gcgcgaaatg cgttgccgtc aaaccaaacg
     5341 tatcagcagc gtcaggcggc gatcgagcaa ttgaaacggc ggtttgaagc cgagtttgac
     5401 gaattggaaa aagaaatcaa atgcaacggc agaaccccgg cattgttgct ttggcagggg
     5461 acaaccggga ggatgccgcc gtccgaatcg gacgcgtggt ttccataccg gtacgggcgg
     5521 gcgggaatgt ccgccttttt ttgttcggat gcgtttgaat acccgtccga ttctgtccgt
     5581 ttgcaagggg gatttccgtt cgggcggaaa tccattccgt caaataagaa aggcgttttg
     5641 tccgaccggc cggcttgtgc ctgcggtatc gcaaaacttc gccttaatgc gcccgattgg
     5701 ctagggacgg gcttcggacg gcattgtttt gccggttcac gggcggtatt cgggcttcat
     5761 gccgttgggc aggagctgcc agacgtatcc tgtggttttc tgtttgccgg caagttcgcc
     5821 ggcttcgtcg ccgtaacccc aaaaataatc cacgcgcacc gcgcctttga tcgcgctgcc
     5881 tgtatcctgc gccataatca ggcggttgag ggctttgcgg gtaaccggat gggcggtggc
     5941 gacaaataag ggcgcgccca aggtaatgta gtgccggtcg attgcgccgg cgtattcccc
     6001 catcagcggc gtgcccagtg cgccgacggg gccctcattg ccgcttccgg caagctcgcg
     6061 gaaaaagata tagctggggt tttgacccaa aacttcggcg agtttgtgcg ggttttgccg
     6121 catatatgac ttaatgccct gcatggaggt ttgcccgagc ttgaggtagc ctttgtccgc
     6181 catatagcgt ccgatggaaa catacggatg ctcgtttttg tcggcatagc cgatgcggat
     6241 gtatttgccg gacggggttt tcagacggcc cgagccttgt atgtgcatga aaaaaagttc
     6301 gacggggtct tcggcgtaac cgagtatcgg ggctttgccg tcaagcgcgc cgccgttgat
     6361 ttggttgcgc gtgtggtagg ggaggaagcg gcttccttca aacctgccct tgattgccgt
     6421 tgtgcgcgcg gtaatgggga attgggaaag gtcggcggta tgcgtgccgc cggcattgtc
     6481 gattgtgccg ctgttttttc ccgtctgcct gatgcggaca agggctttcc cgccccgcaa
     6541 accggcaggc agggggacgg agataaaatc gtcgggaatg ccgtaaatcg ggaagcgggc
     6601 ccgttccgtc cgcctgccgt cgcccttcag caccggttcg taatagccgg taactgtgcc
     6661 ggcaaggctt ccgttgcctg caacctgcca aggcgtgaaa tagcgttcaa aaaaccgctt
     6721 tgcctgaaag gaatggatgg gggtttgaaa ggcttgggcg cacacatcct gccagccttg
     6781 gcggtttttc aaattggcgc agccgaggcg gaaggattgc aggcttttgg caaaatcctg
     6841 cgccgcccag tggggcatgg acaggtgcgg cacaacggta tagacggccc cgccgccggc
     6901 aaccgtcgtt ccggcggggt cggggatgcc ggccggccgg tccgggccgt tgatgacgga
     6961 tgtgtcgggt tgcggaaagg tttggatgct cctgctttgg caggcggcga ggatggcggc
     7021 ggcgatgccg tacagggcgg agcggagcag gtgttttttc ataatggaca atgttgtcgt
     7081 cagtaataaa aaaagatggt ttcgggcggc gttgcggtag ccggggagag gggattttaa
     7141 cacagggcgc agccgcagcc tgcggaactt tccgccacgc ggcaatgcag ataaaaataa
     7201 cttgcatttg tatttgcaag taatgaaaat attccgataa tatattatta atcatccttg
     7261 ttcattcgcg tttacgctgg tcgctttttt aattatgttg cgcgagggta tcgaagccgc
     7321 gctcatcgtc ggcatcgttg ccggtttttt gaaacagtcc ggacattcaa aaactgatgc
     7381 ctaaggtctg gttcggggtc gtccttgctt ctttgatgtg tttgggcatc ggatacggca
     7441 tccattcggc aacgggcgag attccccgga agcagcagga gttcgtcgtc ggcattatcg
     7501 gtttggttgc cgtcgcgatg ctgacttgtg tggttttatg gatgaaaaag gcggcgcgtt
     7561 cgatgaagcg ccagcttcgg gattctgtac aggcggcttt gaaccgtggc agcggtcaag
     7621 gatgggcctt ggtcggtatg gcgtttcttg ccgtggcgcg cgaaggtttg gagagcgttt
     7681 tttttcctgc ttgccgtatt caaacagagc ccgacgtggc agatgccggc cggcgcggta
     7741 gcgggggttt tggctgccgc cgtgattggc gcgttgattt atcagggcgg gatgcgcctg
     7801 aatctggcga agtttttccg ttggacgggg gcgtttctga ttatcgttgc cgccggtctg
     7861 cttgccggct cgctgcgtgc gctgcatgag gcaggcattt ggaacgcgct tcaggacatt
     7921 gtgttcgacc catcaaaata tttgcacgaa gacagtccgt tgggtgtgct gctcggcgga
     7981 tttttcggct ataccgacca tccggcgcag ggcggggcct tggtttggct gctgtacctt
     8041 attcccgtca tgatttggtt tttgcgcggc agcaggccgt ctgaaacttt aacccgtaaa
     8101 gaggaattga aatgagaaaa ttcaatttga ccgcattgtc cgtgatgctt gccttgggtt
     8161 tgaccgcgtg ccagccgccg gaggcggaga aagccgcgcc ggccgcgtcc ggtgagaccc
     8221 aatccgccaa cgaaggcggt tcggtcggta tcgccgtcaa cgacaatgcc tgcgaaccga
     8281 tgaatctgac cgtgccgagc ggacaggttg tgttcaatat taaaaacaac agcggccgca
     8341 agctcgaatg ggaaatcctg aagggcgtga tggtggtgga cgaacgcgaa aatatcgccc
     8401 cggggctttc cgacaaaatg accgtaaccc tgctgccggg cgaatacgaa atgacctgcg
     8461 gccttttgac caatccgcgc ggcaagctgg tggtagccga cagcggcttt aaagacaccg
     8521 ccaacgaagc ggatttggaa aaactgcccc aaccgctcgc cgactataaa gcctacgttc
     8581 aaggcgaggt taaagagctg gcggcgaaaa ccaaaacctt taccgaagcc gtcaaagtag
     8641 gcgacattga aaaggcgaaa tccctgtttg ccgacacccg cgtccattac gaacgcatcg
     8701 aaccgattgc cgagcttttc agcgaactcg accccgtcat cgatgcgtgt gaagacgact
     8761 tcaaagacgg tgcgaaagat gccgggttta ccggcttcca ccgtatcgaa cacgcccttt
     8821 gggtggaaaa agacgtatcc ggcgtgaagg aaaccgcggc caaactgatg accgatgtcg
     8881 aagccctgca aaaagaaatc gacgcattgg cgttccctcc gggcaaagtg gtcggcggcg
     8941 cgtccgaact gattgaagaa gcggcgggca gtaaaatcag cggcgaagaa gaccgttaca
     9001 gccacaccga tttgagcgac ttccaagcta atgcggacgg atctaaaaaa atcgtcgatt
     9061 tgttccgtcc gttgattgag gccaaaaaca aagccttgtt ggaaaaaacc gataccaact
     9121 tcaaacaggt caacgaaatt ctggcgaaat accgcaccaa agacggtttt gaaacctacg
     9181 acaagctgag cgaagccgac cgcaaagcat tacaggctcc tattaacgcg cttgccgaag
     9241 accttgccca acttcgcggc atactcggct tgaaataagc cgcaagcgtt cagacggcat
     9301 ttggcggcag ataccgtctg aagttttata gcggattaac aaaaaccggt acggcgttgc
     9361 cccgccccgg ctcaaaggga acggttccct aaggcgccca agcaccgggc gaaccggttc
     9421 cgtaccattt gtactgcctg cggcccgccg ccttgtcctg atttttgtta atccgctata
     9481 tccgccatat gttgcagggc gggctttcag accgccgcta tcggttaatg gaaaaacggc
     9541 gtgcagggat ggcccaccct gctgcacgga tattgaagga aacgccatga gtcaaaacca
     9601 acccgcacaa ccgaccaaac gcaatctgtt caaaaccgcc cttgccgtcg gcgcaatcgg
     9661 cgcaatcgga ggttatttcg gcggcaaaaa acagggcgaa accgccgaac gcaccgccga
     9721 aagccaacac tcgccccaag cctatccctg ctacggcgaa catcaggcag gtatcgttac
     9781 gccgcggcag gcgttttcca ttatgtgcgc cttcgacgta accgcgcaaa gtgccaagca
     9841 gctggaaaac ctgttccgca cactgaccgc ccgcatcgag tttctcaccc aaggcggaga
     9901 ataccaagac ggcgacgaca aactcccgtc agccggcagc ggcattttgg gcaaagcctt
     9961 caaccccgac ggattgaccg ttaccgtggg ggtgggcagc agcctgtttg acggccggtt
    10021 cggactcaaa gacaaaaaaa cggttcattt gcaggaaatg cgcgacttcc ccaacgataa
    10081 gctgcaaaaa agctggtgcg acggcgattt gagcctgcaa atctgcgcct tcacccccga
    10141 aacctgccaa gccgccctgc gcgacatcat caaacacacc gcccaaaccg ccgtcatccg
    10201 ctggagtatc gacgggtggc agcctaaatc cgaacccggc gcgatggcgg cgcgcaacct
    10261 gttgggcttc cgagacggca cgggcaaccc caaggtttcc gatcccaaaa ccgccgacga
    10321 ggttttatgg acgggcgtgg ccgccaacag cctcgacgaa ccggagtggg cgaaaaacgg
    10381 cagctatcag gcagtccgcc ttatccgccg ctttgtcgag ttttggggca ggacgccgct
    10441 tcaagagcaa accgacattt tcgggcggcg aaaatacagc ggggcgccga tggacggcaa
    10501 aaaagaagcc gaccaaccgg atttcgccaa agaccccgag ggtgatatca cgcccaaaga
    10561 cagccatatg cgcctggcga atccgcgcga tcccgaattc ctcaaaaaac actgcctctt
    10621 ccgccgcgcc tacagctatt ctcgcggacc cgcctcaagc ggacagcttg atgtcgggct
    10681 ggtgttcgtc tgctatcagg caaatcttgc cgacggtttc atcttcgtgc aaaacctcct
    10741 caacggcgaa ccgctggaag aatacatcag ccccttcggc ggcggctatt tcttcgtctt
    10801 gcccggcgtg ggaaaaggcg gattcttggg acaagggctg ccgggcgtat aaacctgcct
    10861 gacggacaaa tgccgtccga accttgccaa acgggttcgg acggcatttt actgtttgga
    10921 cggtcaggct tttttgacga attcggattt taaattcatc gcgctgccgt cgattttgca
    10981 gccgatgttg tgatcgcctt cctgcaggcg tatgcctttg accttcgtac cttgtttgat
    11041 cgtcatcgag ctgcctttta ccttgaggtc tttgatgagg atgacggtgt cgccgttttg
    11101 cagcgccgcg ccgttggcat cgcgcacttg agccgcaagg tcggcggcgg attcggtttc
    11161 attccattcg tgggcgcatt cggggcagat gtattgtccg ccgtcttcat aggtgtattc
    11221 ggaggcgcat tgcgggcaag ggggtaatga catggtttgc cgtccttatc ggatgtttgt
    11281 tttgggatgc cgtctgaaac ctgaaaccgg cttcagacgg cacggcttta ttgtttgtct
    11341 ttttccggcc tcatccagcc ttcgatgacg gtttggcggg cgcgggcgag ggcgagtttg
    11401 ttgtcttcga tattgcgggt aatcgtgctg cctgcgcctg tggttacttt gttgcccagt
    11461 gttacagggg caaccagtac gcagttcgaa ccgatgcgca cttcgtcgcc gatgacggtt
    11521 ttgtgtttgt gcacgccgtc gtagttggca ataatcgtgc ccgcgccgaa gttggttttg
    11581 ctgccgactt cggcgtcgcc tatgtaggtg aggtggttgg ctttggtgcc tttgccgatg
    11641 gcggcgtttt tgatttcgac gaagttgccg acgtgtacat tgtcagccag tttggcttgc
    11701 ggacgcaggc gggcgtacgg gccgattcgg ttgttttcgc cgacttcgca gccttcgagg
    11761 tgggagaagg gggcaatttt gctgtttgcg ccgattttgg cgtttttgat gacgcagttt
    11821 gcgccgattt cgacgttgtc gccgagttcg acttcacctt cgatgacgac gttgacgtca
    11881 atcacgacat cctgtccgtg tttcagacgg ccccgcaaat cgaaacgcgc cggatcgcgc
    11941 agggtcacgc ctgctttgag caattcttgc gcctgttcgg tttggaagat gcgttcgagt
    12001 ttggcgagct ggcgtttgtt gttcacgccg gcggcgaggt gggaggcgcg cacccggacg
    12061 gggcggactt tgatgccgtc ggcaacggct ttggcgatga ggtcggttaa ataatattcg
    12121 ccttgggcat tgttgctgga aaggctgttc agccagtttt ccagtttggc gttgggcagg
    12181 acgaggatgc ctgtgttgat ttcgcggatg gttttttggg tggcacttgc gtctttttct
    12241 tcgacaatgg cggttacgct gccgctgccg tcgcggatga tgcgccccaa gcctgtcggg
    12301 tcggcgggca cgtcggtcaa cagcccgact tcgttgcctg cggcttcgag cagggtttcg
    12361 agggtttcaa cgtcaattaa aggaacgtcg ccgtacaaca ccagcgtgcg gccttcggag
    12421 gcaaggtggg gcagggcggt tttgacggcg tggccggtgc cgagttgttc ggtttgttcg
    12481 acccagacgg catcgcgttt gacagtgtct aaaacttgct ctttgccgtg tccgacgacg
    12541 acgcagatgt tttgcggatt cagcgcggcg gcggtgtcga taacgcgctc gaccatgggc
    12601 ttgccgccga tgcagtgcag cactttgggc atttgggaat acatgcgcgt gcctttgccg
    12661 gcggcgagga tgacggtgtt taaagtgttt tgcggcatag cgttttcctg tgccatgccg
    12721 tctgaagcgg tttcagacgg catagggtag gtttatcggt tttgaaactt tggtttttgc
    12781 cagtgttggc gatgctcttc gtcggcgttg ttgccggttt ggtcgggcag cacggcgcgg
    12841 cgttcgggac ggtattggtt gtagttcata tttttcgagt agctgccgtc ttggtaataa
    12901 acgggcgtgc cggcgggata tttttgacgg acggcggttt tgccgttgcc gtcttgataa
    12961 gtttcccacg cgcagcccga caaaaaaagg gcggcggggg tcatcaggat aaggaaggtt
    13021 ttacgcataa cattctttcg tattttcggg gtttgtgcgg gtattgtaat gattttggcg
    13081 gcgttctgac aaagtttctg cataccgtgc cagttgcgcc atatcgctta cggaggcatc
    13141 gataaagggc ggtgcgtggg attttgcacc gaaccggacg gttttcatgc ccaatgcttt
    13201 tgcctgatgg aggttgtccg cgctgtcgtc caccataatg cagcattcgg gcggtacgtc
    13261 caacaggcgg cagacattga gatacgcttg cggattgggt ttgtacagca gtccgaaatc
    13321 atccgtgccg aacagtgcgt cgaaacagtt ttccaaaccg agtgcgccgg caacggcacg
    13381 gacgtaaaac gacgggccgt tggaaaaaac cgccttgcgc ccgttcagac ggcatagggt
    13441 gttttccgta tccgccatgc cgtgcagcct ggtcaggatt gcatcgatcg gatggctttc
    13501 gcgtaaaaat tccgcaatgt cgatttcggg atggtggatt tgcagtccgg cgagcgttgc
    13561 gccgtaacgg tgccaatagt cttgacgcag gtcggacgcg gcggattcgg agagtttgag
    13621 gcggcgtgcc atatagcgcg tcatagcgcg gttgatgagg tggaagatgc ctgcgtcggc
    13681 atcgtgcagc gtgttgtcga ggtcgaacag ccacacggtc gggttttctt gcattttgaa
    13741 ccgtgaaaat ttgttagaat gttattttac agcgaataaa ggaagactcg gaatgaaacg
    13801 gaaaatttgg ctgctgccgc tgctggcggt ttcggcatac ctgcaggcgc agacggaagt
    13861 caggctggcg gtgcataagt cgttcagcct gcccaaaggg ctgattgcgc gcttcgagcg
    13921 ggcaaacgat gcgaaagtgt cgattattca ggcgggcggc gcgaacgaaa tgctcaacaa
    13981 actgattttg agccgagaca acccgattgc cgacgcggtg tacggtttgg acaacgccaa
    14041 tatcggcaag gcgcgggaaa tgggcatttt ggcggcggcg caacccgaat ccgcccccgt
    14101 cgcggtcggg ctgccttcgg ctttggcggt cgattacggc tatgtgtccg tcaattacga
    14161 caaaaaatgg tttgaaggca aaaagctgcc cctgccgcaa accctgcagg atttgacccg
    14221 ccccgaatat aaaaacctat tggtcgtgcc gtcccccgcc acatcttccc ccggcttggg
    14281 cttcctgatg gcgaacatcg gcggtctggg cgaagaaggc gcgtttaaat ggtgggcaca
    14341 gatgcggcag aacggcgtga aggtcgccaa aggctggagc gaggcgtatt acaccgactt
    14401 ttcgcacaac ggcggcgcgt atccgctggt ggtcggttat gccgccagcc ctgcggcgga
    14461 agtatatttt tccaaaggca aatacagcga gccgccgacg ggcaacctgt ttttaaaagg
    14521 cggcgtattc cgtcaggtcg aaggcgcggc ggtcttgaag ggcgcgaaac agccgaagct
    14581 ggcggcaaaa ctggtgcaat ggctgcaaag tccggaagtg cagcaggcgg ttccgtctga
    14641 aatgtgggtt taccccgccg tcaaaaacac gcgcctgccc gacgtgttcc gcttcgccca
    14701 agccccggcg cacactaccg cccccgcgca gcgcgatatt gatgcgaacc agcgcggatg
    14761 ggtttcccgt tggatcagga cggttttgaa ataaaacaaa cataccgccc cgcagggctt
    14821 cagacggcat ttttacacct gtgccgatta cgccgcacgg ggcggatgtt cgatcgagag
    14881 gaaaacaatg gacttcaaac aatttgattt tttacacctg atcagtgttt ccggttgggg
    14941 gcatctggct gaaaaggcgt gggcgttcgg gctgaacctt gccgccgcgc tgcttatttt
    15001 cttggtcggg aaatgggcgg cgaaacgcat tgtcgccgtg atgagggcgg cgatgacgcg
    15061 cgcgcaggtc gatgccacgc tgattagttt tttgtgtaat gttgccaata tcggcttatt
    15121 gattttggtg attattgccg cattgggcag attgggcgtt tccacaacat ccgtaaccgc
    15181 cttaatcggc ggcgcgggtt tggcggtggc gttgtcctta aaagaccagc tgtccaattt
    15241 tgccgccggc gcgctgatta tcctgttccg cccgttcaaa gtcggcgact ttatccgtgt
    15301 cggcggtttt gaaggatatg tccgggaaat caaaatggtg cagacttctt tgcggacgac
    15361 cgacaacgaa gaagtcgtgc tgcccaacag cgtggtgatg ggcaacagca tcgtcaaccg
    15421 ttccagcctg ccgctttgcc gcgcccaagt gatagtcggc gtcgattaca actgcgattt
    15481 gaaagtggcg aaagaggcgg tgttgaaagc cgccgccgaa caccccttga gcgttcaaaa
    15541 cgaagagcgg cagcccgccg cctacatcac cgccttgggc gacaatgcca tcgaaatcac
    15601 attatgggct tgggcaaacg aagcagaccg ctggacgctg caatgcgact tgaacgaaca
    15661 agtggtcgaa aacctccgca aagtcaatat caacatcccg ttcccgcaac gcgacataca
    15721 catcatcaat tcttaaacgc cgtctgaaag ggggggtggg aaatggacgc gttgcacacc
    15781 atcgcccgaa acctgacgaa aaaacgtcaa accgtaagct gtgccgaatc ctgcacgggc
    15841 ggaatgcttg ccgccgcatt cacaagcgtt gcaggcagtt cgcaatggtt cgaccagagt
    15901 tttgtaacat acagcaacaa agccaaagaa taccgcttgg gcgtgttgcc cgaaaccctg
    15961 ctcgaacacg gcgcggtcag ccgccaaacc gtctatgaga tggcgcgcgg cgcgaaagcc
    16021 gtggctcagg cggattacgc cgtcggtatt tccggcatcg ccggcccggg cggcggcgaa
    16081 agcaaacccg tcggcacggt ttggttcggg tttgcctttc cgggcggaag ttgcgaagca
    16141 atgcgccgtt ttgacggcaa ccgcgaatcc gtccgcgcgc aggcggtcgc cttcgcgttg
    16201 gaacggttgg ccgggctggt tgaaaacggc ggcgatgctg tctgaacaaa tccccgccgg
    16261 ataaaaaatg ccgtctgaaa cgttgcaggt ttcagacggc attttgccgg gttaggcggc
    16321 ggtgcggctt atttcacttt gcccttcaac gcgccgtagc ctgccgcgtc catttgttcc
    16381 agcgggatga atttcaagct cgcgccgttg atgcagtagc gcagtccgcc tttgtcgcga
    16441 gggccgtcgg ggaagacgtg tcccaagtgc gaatcggcgg cgcggcttct gacttcggtg
    16501 cggcgcatat tgaagctgaa atcatcgtgt tcggtaacgg attttgcatc aatcgggcgc
    16561 gtgaagctcg gccagccgca gccggaatca tatttgtcgg cggagctgaa caggggttcg
    16621 ccgctgacaa cgtccacata aatgccgggt ttgaacaaat ggtcgtattc gtggctgaag
    16681 gcgtattcgg tcgcgctgtt ttgggtcact tggtattgct cttcggtcag ggtgcgtttg
    16741 agttcggcgt cactcggttt tttatacgtt gccgcgtcga agcctttgcc ttgcggtgcg
    16801 gctttggttt tgcccggcag cggttcgtcg gctttgcgga tgtcgatgtg gcagtagccg
    16861 ttggggtttt taatcaggta gtcctgatgg tattcctcgg cgtcgtagaa gtttttcagc
    16921 ggttcgtttt caacaacgag gggcagttgg tatttttgct gctcgcgttt gagggcggcg
    16981 gcgatgacgg ctttttcggc ggggtcggtg tagtacacgc cgctgcggta ttgcgtgccg
    17041 gtgtcgttac cctgtttgtt gaggctggtc ggatcaacga cgcggaaata atattgcagg
    17101 atgtcgtcca ggctgagttt gtcggcatcg taggtcactt tgacggtctc ggcatggccc
    17161 gtatggcggt aggacacgtc ttcgtagctc gggttttccg tgttgccgtt ggcgtagccg
    17221 gataccgcgt caaccacgcc gtcgatgcgt tggaaatagg cttccaagcc ccagaagcag
    17281 ccgccggcga ggtagatggt gcgcgtgttc atgattgctg aatccttttt ctgagtgtcg
    17341 ggtttgtaga acgaatgttt caaactgccc aaatcggcat tcgggttgcg gattaacgcc
    17401 aatgcctgcg cttcgttgat gctgcctttg acgatgcgct gcacgtcgcc gtctttaccg
    17461 attaacgccc aagaaggata aacgctgata ttcaggtttt gggcgatcgt gccgccgttg
    17521 tcggtaacga cgggcagctt ggggtagttc aaaccggcat accatttttg aaactcgccg
    17581 tcttttttct cgtgcaaaaa gccgggggag gcgacggtaa tcaggttggc ggagctgaat
    17641 tttgcatctt gcgcccattt ctcggcctgt cccaattcgg acaaacataa aggacaccag
    17701 ctcgcccaaa atttaatcag cgtcggtttg tcttttttca aataaacact ggcggggcgg
    17761 ttgtccgcgg tttttaacgt ggataaagtg tgcggcacgg tcgcggtccc ggcatcgacg
    17821 attttgggcg aacaagcgcc cagcgcaagc aggcagccga acttggcgca aagggaaaag
    17881 aaagtacggt gtttcatttt gatgtttcct gtgtggacgg tttgcatgat tagacgtttg
    17941 agatgccgaa accttacggc ccggattttc agacaacctt gccgcgcaaa atacgctaca
    18001 atacgcccta tttcaagttt ctaaaattaa aaggaaaatt caatgttcag cttcttccgt
    18061 cgcaagaaaa aacaggaaac gccggctctc gaggaggccc aagttcagga aaccgcagca
    18121 aaagtagaat ctgaagttgc tcaaatagtt ggaaatatta aagaagatgt cgaatcttta
    18181 gcagaaagcg tcaaagggcg ggccgaatct gccgttgaaa ccgtcagcgg tgcggttgaa
    18241 caggtaaagg aaaccgttgc cgagatgccg tctgaagcag gggaagcggc ggaacgcgtt
    18301 gaatccgcaa aagaagctgt tgccgaaacc gtcggcgagg ctgtcgggca agttcaagaa
    18361 gccgttgcga caactgaaga acacaagctc ggttgggctg cgcgtttgaa acaaggcttg
    18421 gccaaatcac gcgacaaaat ggcgaaatcg ctggccggcg tgttcggcgg cggacaaatc
    18481 ggcgaggatt tgtacgaaga gctggaaacc gtgctgatta ccggcgatat gggcatggag
    18541 gccaccgaat acctgatgaa agacgtgcgc ggccgcgtca gcctcaaagg gctgaaagac
    18601 ggcaacgaat tgcgcggcgc gttgaaagaa gccttgtacg acctgattaa gccgttggaa
    18661 aaaccgctgg tcttgcccga aactaaagag cctttcgtga ttatgcttgc cggtatcaac
    18721 ggcgcgggca aaaccacgtc tatcggcaaa ctcgccaaat atttccaagc gcagggcaaa
    18781 tccgtattgc tggcggcggg cgataccttc cgcgccgccg cccgtgagca gcttcaggct
    18841 tggggcgggc gcaacaatgt aaccgtcatt tcacaaacca cgggcgattc cgccgccgtg
    18901 tgcttcgatg ccgtccaagc cgccaaagcg cgcgggatcg acatcgtgct tgccgacacc
    18961 gccggccgcc tgcccacgca gcttcatttg atggaagaaa tcaaaaaagt gaagcgcgtg
    19021 ctgcaaaaag ccattcccgg cgcgccgcac gaaattatcg tcgtactcga tgccaatatc
    19081 gggcaaaacg ccgtcaacca agtcaaagcc tttgacgacg cattggggct gacggggctt
    19141 atcgttacca aactcgacgg cacggcaaaa ggcggcatcc tcgccgcgct tgcttccgac
    19201 cgccccgtcc ccgtccgcta catcggcgtg ggcgaaggca tagacgacct gcgcccgttt
    19261 gacgcgcgcg cgtttgtgga cgcactgctg gattgagccg aaatgccgtc cgaaaacggc
    19321 a
//
LOCUS       DAWXHA010000030        19006 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.030, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000030 DAWXHA010000000
VERSION     DAWXHA010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19006
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.030"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            306..596
                     /locus_tag="AABD07_000803"
     CDS             306..596
                     /locus_tag="AABD07_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HFB2355374.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKAGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
     gene            688..2322
                     /gene="groL"
                     /locus_tag="AABD07_000804"
     CDS             688..2322
                     /gene="groL"
                     /locus_tag="AABD07_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HFB2355375.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLDDLGQAKRIEIGKENTTVID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIGMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEEKPAVPDMGGMGGMGGMM"
     gene            2976..4562
                     /locus_tag="AABD07_000805"
     CDS             2976..4562
                     /locus_tag="AABD07_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFB2355376.1"
                     /translation="MFAYNGLFLINNSRGINVSDSKTKERATFGTRRAFMIAAIGSAV
                     GLGNIWRFPYIAFENGGGAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLG
                     RWFEPVGWWNVMTNIVICIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGP
                     EALGLDFVGKVAGPLAGVWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLT
                     LPGAAKGLDALFTPDWSKLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGG
                     TGLVVGFANSSFELLAGIGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAP
                     MGWLIGILFFGSLVFAGVTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLL
                     FGTATGLPVLDVMDKFVNTYGIVAAGFVYVAAIIIGGRLPELRRHLNALSSIRVGGLW
                     TACVVFTVVMLGYMLYQDTAGLLEKNYGDYPDGFLNIFGWGMSAALIMFGLLLSLLPW
                     KHGQDFNVKDEHEHEQGGEK"
     gene            4559..4651
                     /locus_tag="AABD07_000806"
     CDS             4559..4651
                     /locus_tag="AABD07_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017489029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HFB2355377.1"
                     /translation="MSTSAIVMMVAAIAVIWGGLLLSLLRLPEE"
     gene            complement(4703..5125)
                     /locus_tag="AABD07_000807"
     CDS             complement(4703..5125)
                     /locus_tag="AABD07_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355378.1"
                     /translation="MKHAPIILLLTASSAALLSAGCTALPSDRPPLRTLPKSAPIQPA
                     NPYSRPPSGTPDGAFSTRASNGRVLKSIVKNGVFDRFVDIYHPNGKLHSHTPVENGVA
                     QGYTEQGILRTRILYRDGHIVRAQTLDASGKVEREWQP"
     gene            complement(5319..6539)
                     /gene="lysA"
                     /locus_tag="AABD07_000808"
     CDS             complement(5319..6539)
                     /gene="lysA"
                     /locus_tag="AABD07_000808"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HFB2355379.1"
                     /translation="MTLFCEQVPYPRLAEEFGTPLYVYSQSALTGAFENYQTAFAALN
                     PLVCYAVKANGNLSIIKHFASFGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGA
                     LLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKNIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNTRNRAAEVLVDGGGYKLIRRR
                     ETLEQQMANELACL"
     gene            complement(6550..6720)
                     /locus_tag="AABD07_000809"
     CDS             complement(6550..6720)
                     /locus_tag="AABD07_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prokaryotic lipo-attachment site family protein"
                     /protein_id="HFB2355380.1"
                     /translation="MKYGVFFAAATALLLSACGYKGGLYLPKEGDTARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            6791..7114
                     /gene="cyaY"
                     /locus_tag="AABD07_000810"
     CDS             6791..7114
                     /gene="cyaY"
                     /locus_tag="AABD07_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HFB2355381.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIAEL"
     gene            7147..7566
                     /locus_tag="AABD07_000811"
     CDS             7147..7566
                     /locus_tag="AABD07_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HFB2355382.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGNTGY
                     FYAASQEGILDALHIYNVEDVSDKHIPNHVLILWDGACTIAALCINDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSRKPT"
     gene            7588..8094
                     /gene="luxS"
                     /locus_tag="AABD07_000812"
     CDS             7588..8094
                     /gene="luxS"
                     /locus_tag="AABD07_000812"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HFB2355383.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGAGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVLNVKDQSKIPELNEYQCGTYLMHSLAEAQQIAQNVLARKVAVNRNGDLA
                     LDESLLNA"
     gene            8238..11030
                     /gene="polA"
                     /locus_tag="AABD07_000813"
     CDS             8238..11030
                     /gene="polA"
                     /locus_tag="AABD07_000813"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HFB2355384.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALIGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVMEHAP
                     EIKGKVGENLQAALPQLPLSYDLVTIKTDVDLHTELSDGIESLRRTAPKWAQLAVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEIPSEKRAEKATAPEKLDYQA
                     VTTEAQFAALLDKLAKADTIGIDTETTSLDAMNAELVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNNIAGDAMLASYI
                     IESHLGHGLDELSGRWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALR
                     LEARLRAQMDDKQLEMYEKMELPVAQVLFEMECNGVQIDRAELARQSAELGAELMKLE
                     QEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPRDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPPGSVIVSADYSQIELRIMAHLSGDKTLIAAFQSGEDVHRRTAA
                     EVFGTAPENVSPEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGYVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMINVRNWLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDV
                     PLVAEVGVGENWEEAH"
     gene            11592..12287
                     /locus_tag="AABD07_000814"
     CDS             11592..12287
                     /locus_tag="AABD07_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355385.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     INDKNVASASLEDIQTILNLKRAYQYVISHISNGEPVNISLLKRINNIVAKDDSLVPV
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPRFNEKLSAFYRTGDDTDISKFVYQNC
                     ISGIDYFGADEDI"
     gene            complement(12527..16933)
                     /locus_tag="AABD07_000815"
     CDS             complement(12527..16933)
                     /locus_tag="AABD07_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFB2355386.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQARAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALAGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGWKYADLNKYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPHQNGKYFFND
                     NNNGAGKIDAKHKHYSLPYRLKTRTVQLFNVSLSETAREPVYHAAGGVNSYRPRLNNG
                     ENISFIDKGKGELILTSNINQGAGGLYFEGNFTVSPKNNETWQGAGVHISDGSTVTWK
                     VNGVANDRLSKIGKGTLLVQAKGENQGSVSVGDGKVILDQQADDQGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDITTTGNNNNLDSKKEIAYNGWFGEKDATKTNGRLNLNYQPEEADRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLGSGWSKMEGIPQGEIVWDNDWIDRTFKA
                     ENFHIQGGQAVVSRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTSCTEK
                     TITDDKVIASLSKTDIRGNVSLADHAHLNLTGLATLNGNLSAGGDTHYTVTRNATQNG
                     NLSLVGNAQATFNQATLNGNTSASDNASFNLSNNAVQNGSLTLSDNAKANVSHSALNG
                     NVSLADKAVFHFENSRFTGKISGGKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSAADAPRRRSRRSLLSVTPPTSAESRFNTLTVNGKLNGQGTFRFMS
                     ELFGYRSGKLKLAESSEGTYTLAVNNTGNEPVSLEQLTVVEGKDNTPLSENLNFTLQN
                     EHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAGETEAALTAKQAQLAAKQQAE
                     KDNAQSLDALIAAGRDATEKAESVAEPARQAGGENAGIMQAEEEKKRVQADKDTALAK
                     QREAETRPATTTFPRARRARRDLPQPQPQPQPQPQRDLISRYANSGLSEFSATLNSVF
                     AVQDELDRVFAEDRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVG
                     ILFSHNRTENTFDDGIGNSARLAHGAVFGQYGIGRFDIGISAGAGFSSGSLSDGIRGK
                     IRRRVLHYGIQARYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRA
                     GIKADYSFKPAQHISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAE
                     IKGFTLSLHAAAAKGPQLEAQHSAGIKLGYRW"
     gene            17371..18717
                     /gene="mnmE"
                     /locus_tag="AABD07_000816"
     CDS             17371..18717
                     /gene="mnmE"
                     /locus_tag="AABD07_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HFB2355387.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAQALCGKTPEP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMEMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASGRSAARLALRSLKGDFSRRIHGLV
                     EGLITLRMLVEAALDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRMILDTLPSDLKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLCEAGWQGESEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
BASE COUNT         4314 a         4891 c         5235 g         4566 t
ORIGIN      
        1 aggacaaggc ggcgaagccg caggcagtac agatagtacg gaaccgattc acttggtgct
       61 tcagcacctt agggaatcgt tctctttgag ctaaggcgag gcaacgccgt accggtttaa
      121 atttagtcca ctataaaaaa cggcggaaat aaattttttt ccgcctcact tgaattttcc
      181 cgcacacacc ctaattttgc cgacttgtac gggcaggccg ttaggcggca gcccggtttc
      241 cacttcaatt tgtccgaacc gttcgggcag atgattgttt tcaaaccatt tatcggagca
      301 taaatatgac catccgtcct ttacacgacc gcgtcgtcgt caaacgcttg gaagctgaag
      361 aaaaaaccgc ctctggcatc gtcctgccgg gcgcggccgc cgaaaaaccc gatatgggcg
      421 aagtcatcgc cgtgggtgcg ggcaaaatcg gcaaagacgg cgcgcgccgt ccgctggatg
      481 tcaaagccgg cgacaaaatc attttcggca aatacagcgg ccaaaccgta aaagccgacg
      541 gcgaagagct gttggtaatg cgcgaagaag atattttcgg catcgttgaa aaataaatac
      601 ggacacgatg ccgtctgaaa cggcaaaccg ccttcagacg gcataaacgg ttttatcaga
      661 cagttttaag atttttggag aattgaaatg gcagcaaaag acgtacaatt cggcaatgaa
      721 gtccgccaaa aaatggtaaa cggcgtgaat attttggcaa acgccgtgcg cgtaaccttg
      781 ggccccaaag gccgcaacgt ggtggttgac cgcgctttcg gcggcccgca catcaccaaa
      841 gacggcgtaa ccgtcgccaa agaaatcgaa ctgaaagaca agtttgaaaa tatgggcgcg
      901 caaatggtga aagaagtcgc gtccaaaacc aacgacgtag ccggcgacgg tacgactacc
      961 gccaccgtat tggcacaatc catcgttgcc gaaggcatga aatacgttac cgccggcatg
     1021 aacccgaccg atctgaaacg cggcatcgac aaagccgttg ccgctttggt tgacgagctg
     1081 aaaaacatcg ccaaaccttg cgatacttcc aaagaaatcg cccaagtcgg ctcgatttcc
     1141 gccaactccg acgaacaagt cggcgcgatt atcgccgaag cgatggaaaa agtcggcaaa
     1201 gaaggcgtga ttaccgttga agacggcaaa tctttggaaa acgagctgga cgtggttgaa
     1261 ggtatgcagt tcgaccgcgg ctacctgtcc ccttacttca tcaacgacgc ggaaaaacaa
     1321 atcgccggtc tggacaatcc gtttgttttg ctgttcgaca aaaaaatcag caacatccgc
     1381 gacctgctgc ccgtgttgga acaagtggcg aaagccagcc gcccgctgtt gattatcgct
     1441 gaagacgtag aaggcgaagc cttggcgact ttggtcgtga acaacatccg cggcatcctg
     1501 aaaaccgttg ccgtcaaagc ccccggcttc ggcgaccgcc gcaaagcgat gctgcaagac
     1561 atcgccatcc tgaccggcgg cgtagtgatt tccgaagaag tcggcctgtc tttggaaaaa
     1621 gcgactttgg acgacttggg tcaagccaaa cgcatcgaaa tcggtaaaga aaacactacc
     1681 gtcatcgacg gcttcggcga cgcagcccaa atcgaagcgc gtgttgccga aatccgccaa
     1741 caaatcgaaa ccgcgaccag cgattacgac aaagaaaaac tgcaagagcg cgttgccaaa
     1801 ctggcaggag gcgtggcagt gatcaaagtc ggcgcggcga ccgaagtcga aatgaaagag
     1861 aaaaaagacc gcgtggaaga cgcgctgcac gctacccgcg cagccgttga agaaggcgtg
     1921 gttgcaggcg gcggcgtagc cctgttgcgc gcccgtgccg ctttggaaaa cctgcacacc
     1981 ggcaatgccg accaagacgc aggcgtacaa atcgtattgc gcgccgttga gtctccgctg
     2041 cgccaaatcg ttgccaacgc aggcggagaa cccagcgtgg tggtgaacaa agtgttggaa
     2101 ggcaaaggca actacggtta caacgcaggc tccggcgaat acggcgacat gatcggaatg
     2161 ggcgtactcg accctgccaa agtaacccgt tccgcgctgc aacacgccgc gtctatcgcc
     2221 ggtctgatgc tgacgaccga ctgcatgatt gccgaaatcc ctgaagaaaa accggctgtg
     2281 cccgatatgg ggggaatggg cggtatgggc ggcatgatgt aagcaatgcc gtctgaaacc
     2341 ttcagacaac aagccgcacg gtcaacgccg tgcggttttt ttgcgaataa gtgcggctaa
     2401 ggcgcaaacc ttaaaattat agcggattaa caaaaaccgg tacggcgttg ccccgccccg
     2461 gctcaaaggg aacggttccc taaggcgccc aagcaccggg cgaaccggtt ccgtaccatt
     2521 tgtactgcct gcggctggcc gccttgtcct gatttttgtt aatccgctat atttcccgcc
     2581 atcccaaaaa cgaagagcgg caggaattta tcggaaaaac agcaaccttt ccgccgtcat
     2641 tcccgcgaaa gcgggaatct aggttcgtcc ggtttcggtt atttccgata gattcctgcc
     2701 gcgttggggg tctggattcc cgcctgcgcg ggaatgacgg gactttaggt ttctgttttt
     2761 gtttttctgt ttttgcggga atgacgggga agttggcggt tgtttcttat ggagtggttt
     2821 ttgtatttgg ataaaaaatt tttcgttttc aagccttcac cgcttgccat cggcgttaaa
     2881 attttttacg ataagcacat agattgtaaa caatcggcca caagccggtt tgttttttca
     2941 gaagacatta tccctgtcag acgctgtttc tatatatgtt tgcctataac ggcttgtttt
     3001 taataaataa ttcaagaggt atcaacgtgt ctgattccaa aacgaaagaa cgcgccacat
     3061 tcggcacgcg ccgcgcgttt atgattgccg ccatcgggtc cgccgtcggc ttgggcaata
     3121 tttggcgttt cccctatatt gcttttgaaa acggcggcgg cgcgttcatc ctgccctatc
     3181 tggtcgcgct tctgacggcg ggcatcccgc tgctgctgct cgattatgcc atcggccacc
     3241 gttaccgggg ttctgcgccc ttggctttcc gccgcctcgg acgctggttc gagccggtcg
     3301 gctggtggaa cgtgatgacc aatatcgtca tctgcatcta ttacgcagtg attatcggtt
     3361 gggcggcaag ctatacctat tattcggtca acgccgcctg gggtgcggat ccgcagggtt
     3421 ttttctttaa ggacttcctg caaatggcgg gcccggaagc cttgggtttg gattttgtcg
     3481 gcaaagtcgc cggccctttg gcgggcgtgt gggtttttac cgccgccatt atggctttgg
     3541 gcgtgcaaaa gggcgtggcg cgcgcctcgt cgttctttat gccgctgctt ttggtgatgt
     3601 ttttgattat ggtcggcatt tcgctgacgc tgccgggtgc ggcaaagggc ttggacgcat
     3661 tgtttacgcc cgactggtcg aaactcgccg attccaaggt ctgggtggcg gcatacgggc
     3721 agattttctt ttcgctttcc atctgcttcg gcattatggt tacctattct tcttatttga
     3781 agaaaaaaac cgacttgggc ggaacggggc tggtggtcgg ttttgccaac agcagcttcg
     3841 aactgctcgc gggcatcggc gtgtttgccg cattgggctt tatggcgcag gcgggcggca
     3901 aggcggtcaa cgaggttgcc tccggcggca tcggtttggc gtttatcgcc tttccgacca
     3961 ttatcaacca ggcgccgatg ggctggctga tcggcatatt gtttttcggt tcgctggtgt
     4021 tcgccggcgt tacgtcgatg atttccatcc ttgaagtgat tgtggcggcg attcaggaca
     4081 agctgaacat cgggcgcgtc aacgccacgc tgctggtctg cattccgatg ggcattgttt
     4141 ccacgctgct gttcggtacg gcgacggggc tgcctgtttt ggacgtgatg gacaaattcg
     4201 tcaacaccta cggcattgtt gccgccggct ttgtttatgt tgccgccatc atcatcggcg
     4261 gcaggttgcc ggaattacgc aggcacctga acgccttgtc ctccatccgc gtcggcggct
     4321 tgtggacggc ctgcgtcgtg tttaccgtcg tgatgctcgg ctatatgctg tatcaggaca
     4381 ccgccggatt gttggaaaaa aactacggcg attatccgga tggtttcctc aatattttcg
     4441 gctgggggat gtcggcggcg ttaatcatgt tcgggctgct gctgtcgctg ctgccttgga
     4501 aacacggtca ggattttaat gtcaaagacg aacacgaaca tgaacaagga ggagaaaaat
     4561 gagtacttcc gccattgtga tgatggttgc cgccatcgcg gtgatttggg gcgggctgct
     4621 gctttccctg ttaaggctgc cggaagagta agcctttaga acgttaaaaa tgccgtctga
     4681 accgcttcag acggcatttg ttttacggct gccattcgcg ttccaccttg cccgacgcat
     4741 ccaaagtttg cgctcggacg atatgcccgt cccggtacag gatgcgcgtc cgcaatatgc
     4801 cctgttcggt atagccttgc gccacgccgt tttcaaccgg cgtgtgcgaa tgcagtttgc
     4861 cgtttggatg gtaaatatcg acaaagcggt cgaacacgcc gtttttgacg atgcttttca
     4921 agacgcgccc gtttgaggcg cgggtgctga atgcgccgtc cggcgtgcct gaaggcggcc
     4981 ggctgtatgg gttggcgggt tggatgggcg cgcttttcgg cagggtgcga agcggcggcc
     5041 ggtcagaggg aagggcggtg cagcccgccg aaagtagggc ggcggacgaa gcggtaagca
     5101 ggaggataat cggagcgtgc ttcatttcaa ttccttagat attgcacccc ataaaagggg
     5161 cgcgtaattt ttttcaacaa ttcccttcgt cagtcgggcg agacggggat ttgttgcgtc
     5221 gtcatttgaa aacaggctgt gtttgaatat tccgccaaga tgtcacttta aacggacaat
     5281 gccgtctgaa ggcttcagac ggcattttga tgttcggctt ataggcaggc gagttcgttt
     5341 gccatttgct gttccaaggt ttcgcgccgg cggatgagtt tgtatccgcc gccgtcaacc
     5401 aacacctccg ccgcacggtt gcgcgtgttg taattgctag ccatactggc cccgtatgcg
     5461 cccgcgctgc ggataagcag caaatcgcct tcttcgcagg cgatggtgcg gtctttgccg
     5521 aggaagtcgc cggtttcaca aatcgggccg acgatgttgg cggtcagagg ctcaatgttt
     5581 ttggtttcaa ccgcttcgat gtggtggtag gcatcgtata gggctgggcg catcaaatcg
     5641 ttcatcgccg catcgaccat cacaaagttt ttctcttcac cgtgtttgac aaattcgacg
     5701 cgcgtcagca atgcacctgc gttgccgacc aagctgcggc ctggctcaag aatgagtttc
     5761 agacggcgtg tccccatcag tttttgaacc gctcgggcat acgcacccaa atcggggacg
     5821 ccttcgtctt tgtaaacaat gccgacgccg ccgcctaagt ccaaatgttc caaaacaatg
     5881 ccttcggcgg caagagcgtc aaccaaaatc aaaatgcgtt cgcaggcttc gaccagtggg
     5941 cttaagtcgg tcagttgcga accgatgtgg cagtcgatgc cgatgatttt caaattgggc
     6001 tgttgtgcgg catggcggta ggcttcgagc gcgtcggcgt aggcgatgcc gaatttgttg
     6061 gctttcagac ctgtggagat gtagggatgg gtttttgcat cgacatcggg attgacgcgc
     6121 agggagacgg gcgcggtttt gcccaaacgc gcggcaattt tctgaatgcg gtcgatttcg
     6181 gggatgcttt ccatattgaa gcattttacg ccggcattca gcgcgaactc gatttccgcc
     6241 tcgcttttgc ctacgccgga aaaaatcgtt ttcgccgcat cgccgcctgc cgccaaaacg
     6301 cgtgccaatt cgccgcccga cacaatgtca aaaccgctgc caaaagaagc aaagtgtttg
     6361 ataatgctca ggttgccgtt tgccttgacg gcgtagcaga caagcgggtt caaagcggca
     6421 aaggcggttt gatagttttc aaatgctccg gtcagcgcgg attggctgta cacataaagc
     6481 ggcgtgccga attcttcggc aaggcggggg taggggactt gttcgcaaaa cagggtcata
     6541 ttttcgtttt catttttggg ttggtggggc ggattgcggt ttgccttgaa gctgcaaacc
     6601 ggtttggatc acgccgaaac gcgccgtatc gccttctttg ggcaggtaga ggccgccttt
     6661 gtaaccgcag gcggaaagca ggagggcggt tgccgccgca aaaaatacgc cgtatttcat
     6721 cggtaaactt ccttcataag cgcgaatgtg gcaagattcg gcatcttaaa caaaaaacat
     6781 gcaaaaagct atgatgaccg aaagcgagtt tatccgcgcg agcgaagcat tatttgaaca
     6841 catcgaagac caaatcgacg aaaacggctg ggatttcgac tgccggtttg ccggaaacgt
     6901 cctgaccatc gaagccggag acggcacgca aatcatcgtc aaccgccaca cgcccaacca
     6961 agaattgtgg attgccgcaa aaagcggcgg ctaccatttc gccgaacaaa acggcaaatg
     7021 gctggcaacg cgcgacagcc gcgattttta cgacgtttta aacgaagccc tgagcgcggc
     7081 ttcgggcgaa gcggttgaga ttgccgaatt gtgattcaat tttcgatata aaaagattgt
     7141 tacccaatgg cacaattacc tctatatcgg actgccgaaa tcggaaattt tactgtcggc
     7201 acgcctaaag ttttagaatc attttccaaa catatccctt atggtgttgt ctttgaagat
     7261 gatggcaaca cgggctactt ctatgccgct tcgcaagagg ggattttgga tgccttgcac
     7321 atctacaatg tcgaagatgt atccgacaaa catatcccca atcatgtctt gattttatgg
     7381 gatggcgcct gcaccatagc cgcattgtgt atcaacgact acatccatgc cgtctatgat
     7441 tttgtcgaac aggcaggata ttgccgcaac ggcttccctg aagcaggcgg cgaatgggta
     7501 aaagtcgaaa accgcgtctt ggacgatgaa ttgctggaca aaatcctatc ccgaaaacct
     7561 acataacccg cacaaaagga tacccaaatg cccctgttag acagtttcaa agtcgatcac
     7621 acccgtatgc acgcccctgc cgtacgcgtg gcgaaaacca tgaccacgcc caaaggcgac
     7681 accattactg tattcgacct gcgcttttgc atccccaata aagaaatcct gcccgaaaaa
     7741 ggcatccaca cgctggagca tttgtttgcc ggctttatgc gcgaccactt gaacggcgcc
     7801 ggcgtggaaa tcatcgacat ttccccgatg ggctgccgca ccggttttta tatgagcctt
     7861 atcggcacgc cttccgaaca gcaggttgcc gatgcgtggt tggcttcgat gcaggatgtt
     7921 ttgaatgtca aagaccaaag taaaatcccc gagttgaacg aataccaatg cggcacttat
     7981 ctgatgcact cgctcgccga agcgcaacaa atcgcgcaaa acgtgttggc gcgcaaagtg
     8041 gcggttaacc gaaacggcga tttggctttg gatgaaagcc tgctgaacgc ttaatccgcc
     8101 gcaaatgctg tctgaacaag ggtttcagac ggcatttgcc ttttccgtta taatccgggg
     8161 ttgtacgggg gcgggtttta agccggcatc gtccttccct atttttctgt cccttatcgg
     8221 tttcaagcgg gttttttatg tccaacagac ctacactcct cctcgttgac ggctcttcct
     8281 atctctaccg cgcgtatcac gcgatggggc aaaacctgac tgcgcctgac ggtgcgccga
     8341 cgggtgcgct gtatggcgta ttgaatatgt tgcgccgttt gcggtcggaa tatccgcacg
     8401 attattgcgc ggtggttttt gatgcgaaag gcaaaaattt ccgccatcaa atgtttgaag
     8461 aatacaaggc gacgcgcccg ccgatgccgg acgatttgcg cccgcaggcg gaagccctgc
     8521 cggatttggt gcgcctgacg ggctggccgg tattggtgat tgggcaagtg gaggcggacg
     8581 atgtgatcgg cacgctggcg aaacaggggg cggaacatgg tttgcgagtc attgtttcga
     8641 cgggcgataa ggatatggcg cagttggtgg atgagcgcgt tacgctggtg aacacgatga
     8701 gcggagaaac gctggatatt gaaggcgtga aggcaaaatt cggcgttcgc cccgaccaaa
     8761 tccgcgatta tctcgcgctg atcggcgaca aggtggacaa cgtaccgggc gtggaaaaat
     8821 gcggcccgaa aacggcggtg aaatggctgg aagcctacgg ttcgttgcaa ggcgtgatgg
     8881 aacacgctcc ggaaatcaaa ggcaaggtcg gcgaaaacct gcaagccgcg ctgccccaac
     8941 tgccgctgtc gtatgatttg gtcacgatta aaaccgatgt ggacttgcac accgagcttt
     9001 cagacggcat cgaaagcctg cgccgtaccg cgccgaaatg ggcgcagctt gcggttgatt
     9061 tcaaacgctg gggcttccgt acttggctga aagaagcgga atcaaacatg aataccggct
     9121 cgaccgatga tttgttcggt agcgacagca tcggcgagca ggcggctttg aatgcggaaa
     9181 taccgtctga aaaacgagct gaaaaagcca ccgcccctga aaaactggat tatcaagccg
     9241 ttaccaccga agctcagttt gccgccttgt tggacaaact agcgaaggcg gacacaatcg
     9301 gcattgatac ggaaaccacg tcattagatg cgatgaatgc cgagctggtc ggcatcagca
     9361 ttgcgttcca agcaggcgaa gcggtttaca tccccgtagg ccacagcctg actgccgcgc
     9421 ccgaacagct tgatttgcaa gacgtattag gccgtctgaa gccgcatttg gaaaaccccg
     9481 ccctgaaaaa aatcggtcaa aacctcaaat acgaccaaca cgttttcgcc aactacggca
     9541 tcgcgttaaa caacattgcc ggcgacgcga tgctcgcttc ctacatcatc gagagccatc
     9601 tcggacacgg cttggacgaa ttgtccggac gctggctcgg tttagaaacc attacctacg
     9661 aatcgctgtg cggcaaaggc gcgaagcaaa tcagttttgc cgatgtcgcc atcgggcagg
     9721 cgaccgaata cgccgcccaa gatgccgatt tcgccctgcg cctcgaagcg cgcctgcgcg
     9781 cgcaaatgga cgacaaacaa cttgaaatgt atgaaaaaat ggagcttccc gtcgcgcagg
     9841 tattgtttga aatggaatgc aacggcgtgc aaatcgaccg cgccgaactc gcccgccaaa
     9901 gcgcggaact cggcgcggag ctgatgaagc tcgaacagga agcctacgcc gctgcaggtc
     9961 aaccgtttaa cctcaactcg cccaaacagc tgcaagaaat cctgttcgac aaaatgggca
    10021 tcccgacaaa agggctgaaa aaaaccgcca aaggcggcat ttccaccaac gaagccgtgc
    10081 tcgaacagct cgcgcccgac taccccctgc ccaaaatcat cctgcaaaac cgcagcctgg
    10141 cgaaactcaa atccacctac accgacaaac tgcccgaaat gatttcgccc cgggataacc
    10201 gcgtgcatac cacctatgcc caagccgtcg ccattaccgg ccgcctcgcc agcaacaacc
    10261 ccaacctgca aaacatcccc attcgcaccg ccgaaggccg ccgcgtgcgc cgcgccttca
    10321 ctgcaccgcc gggcagcgtc atcgtttccg ccgactattc ccaaatcgag ctgcgcatta
    10381 tggcgcacct ctccggtgac aaaaccctca ttgccgcatt tcaaagcggc gaagacgtac
    10441 accgccgcac cgccgccgaa gtgttcggca ctgcgcccga aaacgtctcg cccgagcaac
    10501 gccgctacgc caaaaccatc aacttcggct taatctacgg tatggggcaa tacggtttgg
    10561 caaaatcatt gggcatcgac aacctttccg ccaaaaactt tatcgaccgc tacttcgccc
    10621 gttatcccgg cgtcgccgaa tacatgcagc gcaccaaaga acaagccgcc gcccaaggct
    10681 acgtcgaaac cctgttcggc agaaggctct atttgcccga catccgcaac aaaaacgcca
    10741 acgcccgcgc aggagccgag cgtgccgcca tcaacgcccc catgcaaggc accgcttccg
    10801 acctcatcaa acgcgccatg ataaacgtgc gaaactggct ttcagacggc atcggcagca
    10861 aactggtcat gcaggtgcat gacgaactgg tgctggaagt cgttgaaacc gaactggatt
    10921 ttgtcaaaga aaaactgccg cagattatgg cgaaagtgga cggcggatta ttggatgtac
    10981 cgctggtggc tgaggttggc gtaggggaga attgggaaga ggcacattga gaatgcacaa
    11041 gtattgaact gttacgtttt gatttatcaa aatttaagga agtaaaatac ccgattcgaa
    11101 tgattggaaa tcaatagcaa gccgtaggtc ggatacttgt atccgacaaa agcctgccat
    11161 ctcaaatagc agtcggattc gagaatccga cctgccaaac cgggcgcgga cgctccggtc
    11221 ggcagttagc gcacaaatcg aacagaacat cacaaaaaag cctgattcgg attttccaat
    11281 cgggcttttt tgcgcccgtt ttgtcatccc gtgaaatatc cgcataacaa aaataatgca
    11341 aaatcatgac aaaaccggcg cgaggttaca caaacggatg aaatcaaccg atattcaaac
    11401 acagccattt ttagcgcatt ttcagcgtat ctttatgcgg aaaatttcgt gaacaggttt
    11461 tttgcacagg cttccgccgc gtttcgcggg atgggaaacc gtattagaaa acggacgcac
    11521 gcaacataaa ccccgaaagt gatgataaga tgatgattta acgtactgct ttaattattt
    11581 aaggaattat cgtgtttccc gacaaataca agttgagttt ggaagaaaat atttttctgg
    11641 caaagaaagt attggttgct caaattcaca acctcagccg ttttgagaat tgtcagacga
    11701 ccttgttgca gaccgagcaa attatcaatg acaaaaatgt agcctccgcg tcactggaag
    11761 acatccaaac catcttgaac ctgaaacgtg cctatcaata tgtgatttcg catatttcaa
    11821 acggcgaacc ggtcaatatt tcactcctta aaagaatcaa caacattgtt gccaaggacg
    11881 attctttggt acccgtggat ttccgtaccg gttcggtcgg cgtaacgcta ttggacggtt
    11941 cccgtcatgc cccgaatccg gtgaaggaaa ttgaagtggc ccgcgtgttg caaaatatcg
    12001 gactgcaaag cggttcgacg acggaagcag ccgttcgttt catgctctat tgtatgcggc
    12061 agcaggtttt ttgggacggc aacaaacgga cggcaaccct atttgccaac ggcctgatga
    12121 tggcgggggg ctgcggtatc ctggaaatct ccgaaatgca gatgccgcga ttcaatgaaa
    12181 aactatccgc attctatcgc accggcgacg ataccgatat ttccaagttt gtgtatcaaa
    12241 attgtatatc gggcatagac tatttcggcg cggacgaaga tatatagtgg attaaattta
    12301 aaccggtacg gcgttgcctc gccttgccgt actattttta ctgtctgcgg cttcgccgcc
    12361 ttgtcctgat ttaaatttaa tccactatag atttccccga ctcgccgaac atgggctaaa
    12421 aatcaatttg acggttatca gacgatggag taggcacaag gtggcagaaa aaggggtttg
    12481 acagtgcacg gcggcatcgt caaacccctt tcggcatatc cggcggttac cagcggtagc
    12541 ctaatttgat gcccgcgctg tgctgcgctt ccaattgcgg ccccttggcg gcggcagcgt
    12601 ggagggacag cgtgaaacct ttgatttcgg cgtttacgcc ccattccgca ctgcgggttt
    12661 tgccgaaatc ctgcgccaat acggcggtat tgacgcgcgt tcggactttg ccggaagcgg
    12721 catcggtata ggacaggctc aaataaggcg tgatggaaat gtgttgcgcc ggtttgaatg
    12781 aataatctgc cttaatgccc gcgcggtagc ggttgaatgc aaggcccggg gtggcgatat
    12841 tgacgttttc gtatcggtaa tccgcttttt ggacgaaata gcgcgttgcg ccgatgtgcg
    12901 gttcgatgcc gaatccgccg aaacctgcgc ggtatcttgc ctgaatgccg taatgcagca
    12961 cgcggcggcg gattttgcct ctgatgccgt ctgaaaggct gccgctacta aaacccgcgc
    13021 ccgcgctgat gccgatgtcg aacctgccga tgccgtattg cccgaaaacg gcaccgtggg
    13081 caagccgtgc cgagttgccg atgccgtcgt cgaaggtgtt ttcggtccgg ttgtgcgaaa
    13141 acaggatgcc gacgcgcccg ctgccgaggt ttttctgcat accgatttgg cgcaggtcgg
    13201 tttgttggcg gtaggcgcgg aaatcttgcg aacggtagtg tttggtgtcc cggatgccgc
    13261 ttgtccaaac ggcgttgcgg cggtcttcgg caaacacgcg gtccaattcg tcctgtacgg
    13321 cgaaaacgct gttgagcgtg gcggaaaatt cactcaaacc gctattggca taacggctga
    13381 tcaggtcgcg ctgcggttgg ggttgcggtt ggggctgcgg ttgcggcaaa tcccggcggg
    13441 cgcggcgggc gcgggggaag gtggtggtag ccggccgggt ttccgcttcg cgctgtttcg
    13501 ccaaggcggt gtctttatcc gcctgcaccc gttttttctc ttcctccgcc tgcataatgc
    13561 cggcattttc cccgcctgcc tgccgggccg gttcggcaac gctttctgcc ttttcggtgg
    13621 catcgcgccc ggccgcaatc agcgcgtcaa ggctttgcgc gttgtctttt tccgcctgtt
    13681 gtttggcggc aagttgtgcc tgttttgccg tcaaggcggc ctctgtttct cccgccttgc
    13741 cgagtttgtc ggaaagctct tgttctttga ccggattatg caggcggaac tcgccgtctt
    13801 tgcggataag ctgataacgc catgcgccgg catcgacgtg ttcgttttgc agggtgaaat
    13861 taagattttc ggacagcggt gtgttgtctt ttccttccac taccgtcaat tgctcgagac
    13921 ttacgggttc gttgccggta ttgttgacag ccaaggtgta agtgccttcg gaactttccg
    13981 ccagcttcaa tttgccgctg cggtagccga agagttccga cataaagcgg aatgttccct
    14041 gaccgttcaa tttgccgttt accgtcagcg tgttgaaacg ggattctgcc gaagttggcg
    14101 gcgtaacgga taatagggaa cggcgcgaac ggcggcgcgg cgcatctgcc gcactgccgg
    14161 tttgcgcgcc tgccgcatcg tgtcgatagg cggaattgag tgtaatggtg gcgttgtcaa
    14221 ggtttaaatt gcctaattcc gtgcccgacg gcagcgtcca ttcgctgtct tttaagtgta
    14281 atgccgtatc cttgccgccg ctgatttttc cggtaaagcg gctgttttca aaatggaata
    14341 ctgccttatc ggctagggag acattgccgt tgagtgcgga atggcttacg tttgccttag
    14401 cgttgtcgga aagcgtcaga ctgccgtttt gtacggcgtt gttgcttaga ttaaatgaag
    14461 cattgtccga agccgatgtg ttgccgttta atgtggcttg attaaatgtt gcttgggcat
    14521 tgcccacgag gctaaggttg ccgttttggg tggcgttgcg cgtaaccgta tagtgcgtgt
    14581 ctccgcctgc actaagattg ccgttgagtg tggcaagtcc tgtgagattt aaatgagcgt
    14641 gatcggcaag gctgacattg cctctgatgt cggtcttgct caatgaagca atcactttat
    14701 cgtcggtaat ggttttttcg gtacaacttg tcagacccgt ccagtccgaa cgtgtacaga
    14761 ttgtgtggct ttgatgcggt gcgacaccga aaactgcttg ggcgtgattg cttaaatgcc
    14821 aatcgccttc cactttggca acattgcggg aaaccaccgc ttgtccgccc tgaatatgga
    14881 agttttccgc tttaaatgtg cggtcgatcc aatcgttgtc ccacacgatt tctccttgtg
    14941 ggataccttc catttttgac cacccgcttc ctaaatgatt gtaggcgtgc ggtgtcggtc
    15001 tgccgctgaa aaacagtttg ccgtttgttt gcgtgatatt gccgtttaaa tttgttccgc
    15061 cggaaagcag taaagtgcga tccgcttctt ccggttggta attcagattg agccgcccgt
    15121 tcgttttggt tgcatctttc tcgccaaacc aaccgttgta ggcaatttct tttttgctat
    15181 ccaagttgtt gttattgccg gttgtagtaa tatctttatt gcctgtaatg gtaacggtgg
    15241 attctttgtc ttgattgtgg ttgacaatca tcgccccttc atcggtattt tgaatgcggt
    15301 ggaacgaaag cgaatgcccg ttcaaatcca aacgtccgcc gcgaaagccg aaatagagtt
    15361 tgtcggggtt gaactgatta tcggcattca gttgcaccgt ccccctgccg ctgaccaagc
    15421 cgatttcact aaaggcttgt tttttgcctt gatcgtccgc ctgctgatct aagatgactt
    15481 taccgtcgcc cacgctgacc gagccttggt tttccccttt ggcttgaacc agcagcgtgc
    15541 ctttgccgat tttggacagg cggtcgtttg ccacgccgtt tactttccaa gtaacggtac
    15601 tgccatcact gatatgaacg cccgcgcctt gccacgtttc gttgttttta ggcgagaccg
    15661 taaaattacc ctcaaaatac aaaccgcccg cgccttggtt gatgttgctg gtaagtatca
    15721 attcaccttt tcctttgtca ataaaggaaa tattttctcc attattcagt ctgggtcgat
    15781 aactgttgac cccacctgca gcatgataaa caggttctct tgctgtctcg gataaagaaa
    15841 cattaaacaa ttgaacggtt cgtgttttta atctataagg tagagaatag tgtttatgtt
    15901 tggcatcgat ttttcctgcg ccattattat tgtcgttaaa aaagtatttc ccattttgat
    15961 gtggttcgta gaatactgaa tgggtatctc cagcaaagat ttcatcatag aaccaatctt
    16021 tacgaactag ctggaagcca ttgctttttc ctatataggg gttgcctgtt tgcaataccc
    16081 cattaattaa ccacttttgc ttttgggcat catagataaa cattggtgag ccactgtcgc
    16141 caaatgagcc tcctgttggt aaaaaaccat atgggctatg tttaattttt tcgctaccta
    16201 agttgactgt gccaccacct gatccatttt gtgcaaaggt attgccaccg acgagccaag
    16261 aatatgcgct tgcaatatga tatgaacttt cgcggttatt gggttcgtct tcatcagacc
    16321 gccaatattg tctgcctgct ccgattcgaa cacgatcagg gtatttattt aaatcagcgt
    16381 atttccaccc atccatataa ctggtcatct caacaggttc tgcatctgtg acaaatttgt
    16441 gcaaacgcgg catatgataa tcgccgccat aaggatggcc gttagtccct gctttataat
    16501 tatttctttt cacaatttgg taagaaaagc ggtgctgatc gggattgctt ccctccgcac
    16561 caaaatcaac attgttatag ccgccgttat gtgccacgct cacaatatat tgatcgcccg
    16621 ccaatgccgc cacgccgtta cgcgatacca cagaaaaatc aatcatcggg gctttcgtca
    16681 tcgatttgcc gaccaactcc ccttttttgt tgtaaacctc aatatctttc gccccgactg
    16741 caaacttgcc tttattttcg gcaaagtcgc gatagtattg gtagttgatg ccgaaataag
    16801 tgtgtcccgc ccgggcttgg ggcagaatgc cgaacgacag gcatatggct aagtaagcgg
    16861 gcgagaagcg gatgcggccg gttttagggg ctttgcggtg tgtttcggtt gtccgtttgt
    16921 cggttgtttt cattattttt ccttatctga cgggattcgg tttgtttggg agggcgcggc
    16981 ttccgcttcc gggcggcgcg cgggatgtgg ctatatgtgc ggttcggcgt attttgccgc
    17041 ttctgttcgg agatggtgca gggaagggcg ggaaggaaaa aaaggggatt tttatcaact
    17101 cgccggagca atcgatgggt tgcacataaa ggcatcattt tgaatacgaa atcatatcac
    17161 actttacttt atccccgttc cttttcggtc ggaaccccgc cgttttcggc ggtaaaaacc
    17221 gaccggaggc ggaatgcggg gcagggtttt gtgccgtgcg gtgtcggaat atcgttttac
    17281 acaagccggc aatgccatct gaaagccgaa ccgtcggact tcagacggca tttgctataa
    17341 tcgcggctgt tttgaatttt cgggggtttt atgtcggata acgttccaac gattgcggca
    17401 gtcgcgaccg cgcccggacg cggcggcgtg ggcgtgatac gcatatcggg gaaaaacctg
    17461 ttgccgatgg cgcaggcttt gtgtgggaaa acgcccgagc cgcgcgtggc aacctatgct
    17521 gattttacgg acgcggacgg acaggcaatc gatagcgggc tgctactgtt ttttgccgcg
    17581 ccggcaagtt ttacgggcga agatgtcatc gagcttcagg gacacggcgg gccggtagtg
    17641 atggagatgc tgctgaaccg ctgtttggaa ctgggcgcgc gccttgccga gccgggcgag
    17701 tttaccaaac gtgcgttttt aaacgacaaa ctggacttgg cacaggcgga aggcgtggcg
    17761 gatttgattg acgcatccgg ccgttcggcg gcgcgtctgg cgttgcgctc gctcaagggc
    17821 gatttttcgc ggcggataca cggtttggtc gaaggcttga ttaccttgcg gatgctggtc
    17881 gaagcggcgc tggattttcc cgaggaagac atcgattttc tcgaagcggc ggacgcacgc
    17941 ggcaaactgg acggcttgcg ccgcgccgtg gatgatgtgc ttgccaacgc gcagcagggc
    18001 gcgattttac gcgaaggtct gaatgtcgta ttggtcggtg cgccgaatgt cggcaagtcc
    18061 agcctgttga acgcgctggc gggcgacgaa gtggcgattg ttaccgatat tgccggaacg
    18121 acgcgcgacg cggtcaggga acgtatcctg attgacggcg tgccggtgca tattgtcgat
    18181 acggcaggtt tgcgcgagac ggacgacgtg gtcgaacgca tcggcatcga acgcagccgc
    18241 aaagccgtat ccgaagccga tgtcgcgctg gtgttggtcg atccgcgcga gggtttgaat
    18301 gaaaagacgc ggatgatttt ggatacgttg ccgtcggatt tgaaacgcat tgaaatccac
    18361 agcaaatccg atttgcacgc acacgcggca ggcgggttcg gtacgggcgc ggaaaccgtc
    18421 atcgcgctgt cggcgaaaac cggcgacggc ttggacgcgc tgaaacggac gctgttgtgc
    18481 gaggccggtt ggcagggcga aagcgaaggg ctgtttttgg cgcggacgcg gcacgtcaac
    18541 gcactcaagg cggcgcagga agaattgtcg ctggccgctt tgtgcggcaa ccatcaaatc
    18601 gagctgtttg ccgaacactt gcggctggct caggtcgcgt gcggcgaaat tacgggggaa
    18661 tttacggcgg acgacctgct cggcgtgatt ttttcgaggt tttgcatcgg aaaataagcg
    18721 ggccggaggc attgtggcgg tgtccggctg aacattccgt tatcccataa aaacgggaat
    18781 ccgatccgtt cggttttggt tttttgaatt tcgggcaacg cttaaatctt cattccgcgc
    18841 aggcggaaat tatcggcgcg gtacggcaac ttttttcaat actgaaagcc ccgtcattcc
    18901 tgtaaaaaca aaaaaatcaa aaacagaaaa ctgaaatatc gtcattcccg cgcaggcggg
    18961 aatccagccc cgtcggcacg gaaacttatc gggaaaacgg tttctt
//
LOCUS       DAWXHA010000031        18809 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.031, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000031 DAWXHA010000000
VERSION     DAWXHA010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18809
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.031"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            1..759
                     /locus_tag="AABD07_000817"
     CDS             1..759
                     /locus_tag="AABD07_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFB2355388.1"
                     /translation="MSEARNTGIKNSNGKYIAFIDSDDFINCQVLLDFLGKDDSDMPD
                     VVFLNAVKYDKGRVSYFGEDYQPEKILNQSKVEVLKGLCRFRKFPGSAWNKIIKRELI
                     IREKLFFEKGIYSEDIEWSMRLFNAATTFSYLDGCYYYYRQGRKDSITGTVSEKGIKS
                     LLYILEKNAKMEFNRDISSYLYSFLSYEYLVLLFIMTSKNIACDSDIKRRAYHLRFML
                     LKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            800..1330
                     /locus_tag="AABD07_000818"
     CDS             800..1330
                     /locus_tag="AABD07_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HFB2355389.1"
                     /translation="MNAIRTFQNRMPEIHETCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGSTVLDDAVIEDDVMIGAGSLVPPRKRLEGGYLYIGSPVRQVRLLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(1498..3093)
                     /locus_tag="AABD07_000819"
     CDS             complement(1498..3093)
                     /locus_tag="AABD07_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HFB2355390.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVEDI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGINNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATMRMVGPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHNRELAEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(3200..3595)
                     /gene="hisI"
                     /locus_tag="AABD07_000820"
     CDS             complement(3200..3595)
                     /gene="hisI"
                     /locus_tag="AABD07_000820"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HFB2355391.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDTIVMLIAQNGGIACHTGRES
                     CFYKKWNGGAWETADAVLKDEKEIYGSTH"
     gene            complement(3626..4393)
                     /gene="hisF"
                     /locus_tag="AABD07_000821"
     CDS             complement(3626..4393)
                     /gene="hisF"
                     /locus_tag="AABD07_000821"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HFB2355392.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLINEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AVEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGIFHFGEIAIREAKRTMREAGIEVRL"
     gene            complement(4406..5143)
                     /gene="hisA"
                     /locus_tag="AABD07_000822"
     CDS             complement(4406..5143)
                     /gene="hisA"
                     /locus_tag="AABD07_000822"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HFB2355393.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPADTALHWFEQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGMRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDLVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQSVRIPVIASGGLTGLDDIPALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(5176..5814)
                     /gene="hisH"
                     /locus_tag="AABD07_000823"
     CDS             complement(5176..5814)
                     /gene="hisH"
                     /locus_tag="AABD07_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HFB2355394.1"
                     /translation="MQTAIIDYGMGNLHSVLKSVRTAGQLAGKNTKIFLSGDPDRVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFARDLRDPQGCRLKVPHMGWNTVRQTQNHPLFQGIPQNTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(5944..7446)
                     /gene="pta"
                     /locus_tag="AABD07_000824"
     CDS             complement(5944..7446)
                     /gene="pta"
                     /locus_tag="AABD07_000824"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HFB2355395.1"
                     /translation="MAKVLVVPVSAGLNTSAAAQAFAKALDAQVFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NTDADALAHQLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQAGKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7631..8689)
                     /locus_tag="AABD07_000825"
     CDS             complement(7631..8689)
                     /locus_tag="AABD07_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ions import ATP-binding protein FbpC"
                     /protein_id="HFB2355396.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKT
                     TLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIA
                     YGLGNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCRLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPAASIHAVVLKTTPKARHTEISLRAGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8710..10227)
                     /locus_tag="AABD07_000826"
     CDS             complement(8710..10227)
                     /locus_tag="AABD07_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HFB2355397.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLTAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LILGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTADDVHTLSTAVWEYTSDAQYAAAAPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(10295..11290)
                     /locus_tag="AABD07_000827"
     CDS             complement(10295..11290)
                     /locus_tag="AABD07_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter substrate-binding protein"
                     /protein_id="HFB2355398.1"
                     /translation="MKTSIRYALLAAALTATTPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYVPT
                     SGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLAGKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(11681..12022)
                     /locus_tag="AABD07_000828"
     CDS             complement(11681..12022)
                     /locus_tag="AABD07_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP19 family protein"
                     /protein_id="HFB2355399.1"
                     /translation="MTDTDTQADRFEQMMRQAVDKLFEQHDGKLESMDGREQELVLIW
                     RAEADIGNGGILQFVCNWGFPAAEKTCSVLKKIGAVHSAMLIHRAADALGKEIRHLQS
                     EGKNLKEMWDI"
     gene            complement(12080..13456)
                     /gene="argH"
                     /locus_tag="AABD07_000829"
     CDS             complement(12080..13456)
                     /gene="argH"
                     /locus_tag="AABD07_000829"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HFB2355400.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDQRLAEWDIQGSLAHAQ
                     MLTRSGVLSENDLTDIRRGMSEILEEIRSGKIEWPLDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQNLIQNLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDFERMADCRKRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPGNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEALQGFSKLISDDVYGVLTPEGSLNARNHLGGTAPEQVRLQV
                     KRWREMSA"
     gene            complement(13475..14344)
                     /gene="galU"
                     /locus_tag="AABD07_000830"
     CDS             complement(13475..14344)
                     /gene="galU"
                     /locus_tag="AABD07_000830"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HFB2355401.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKANPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETKLEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEPSQTGSYGIVETEQLKQFQRITGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(14372..14971)
                     /gene="rdgB"
                     /locus_tag="AABD07_000831"
     CDS             complement(14372..14971)
                     /gene="rdgB"
                     /locus_tag="AABD07_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HFB2355402.1"
                     /translation="MSEKPEKIVLASGNAGKLKEFGNLFKPYGITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAGHSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCSYVCVLVFVRHKDDPRPIIAEGIWHGQWHDTPLGQNGFGYD
                     PYFYLPEHGKTAAELDSEVKNRESHRAQALADLIRKLAL"
     gene            complement(14964..15197)
                     /locus_tag="AABD07_000832"
     CDS             complement(14964..15197)
                     /locus_tag="AABD07_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355403.1"
                     /translation="MNRRKIYLLSVALFTLAFMLPVLLGAYLLTAGSKAFAVASFLFA
                     FGALFGQIGALALYLRHKSLRAAPSSSQGNRYV"
     gene            complement(15305..15838)
                     /locus_tag="AABD07_000833"
     CDS             complement(15305..15838)
                     /locus_tag="AABD07_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HFB2355404.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RIEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGGAE
                     EAKKVIKESIERWNKQA"
     gene            complement(15940..16398)
                     /gene="nudB"
                     /locus_tag="AABD07_000834"
     CDS             complement(15940..16398)
                     /gene="nudB"
                     /locus_tag="AABD07_000834"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HFB2355405.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPKGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLEDGQLQDRHDSTVYEIYHHWRHRYPKGVFENREHVFR
                     AEIPRDTPVVLQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            16609..16685
                     /locus_tag="AABD07_000835"
     tRNA            16609..16685
                     /locus_tag="AABD07_000835"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16643..16645,aa:Pro,seq:ggg)
     gene            16948..>18809
                     /gene="mafB"
                     /locus_tag="AABD07_000836"
     CDS             16948..>18809
                     /gene="mafB"
                     /locus_tag="AABD07_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HFB2355406.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDPFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFMAAIPIKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAHAQREWENKTGLDFNHF
                     IGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVEIKKPDGSWEVKTKKGG
                     KVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNKWQGTSKSGIKIEGFTEPN"
BASE COUNT         4021 a         4516 c         5693 g         4579 t
ORIGIN      
        1 ttgtcggagg cgagaaatac cggaataaaa aattcaaatg gaaaatatat agcatttatt
       61 gattcggatg attttattaa ttgtcaggtt ttgctggatt ttcttggtaa agatgatagt
      121 gatatgccgg atgtggtttt tttaaatgca gttaaatatg ataagggaag agtttcatat
      181 tttggcgaag attatcagcc tgaaaaaata ttaaatcaat ccaaagtcga agttttgaaa
      241 ggattgtgcc gatttagaaa atttccgggt tcggcgtgga ataagattat aaaaagagaa
      301 ttgattatta gagaaaaact gttttttgaa aagggaattt attctgaaga tattgaatgg
      361 tcaatgaggt tgtttaatgc ggcaacaact ttttcttatt tggacggttg ttattactat
      421 tatcggcagg gaagaaaaga ttctattacg ggaactgttt cggaaaaagg tataaagtca
      481 ttattatata ttttggaaaa aaatgcgaaa atggaattta atagggatat atcgagttat
      541 ctttattctt ttctttccta cgaatatctc gttttgcttt ttataatgac gagtaaaaat
      601 atagcgtgtg attctgatat aaaaagaagg gcatatcatt taaggtttat gctgttaaag
      661 tccaataagc tgatatataa gctgatattc ccgataatca cattattcgg ggtcgatatt
      721 acaggcagga ttttaaaagc aatcaggggg aatatttaat aaatccttta acaatatata
      781 ccttaccgaa ggaggaaaaa tgaacgcaat cagaactttc caaaaccgca tgcccgaaat
      841 ccacgaaacc tgcatgatag acgaggcgtg cgtcgtcatc ggcgaagtct cgcttgccga
      901 agatgtttcc gtgtggccgt gcgccgtgtt gcgcggcgat gtgaacagca tcaccgtcgg
      961 cgcgcgcagc aatatacagg acggcagcgt cctgcacgtt tcccacaaaa ccgccgccaa
     1021 acccgaaggg tcgccgctgg ttatcggcga agacgttacc gtggggcaca aagtgatgct
     1081 gcacggctgc cgaatcggta accgcgtctt ggtcggtatg ggcagcaccg ttttggacga
     1141 tgccgttatt gaagatgacg tgatgatcgg cgcgggcagc ctcgttccgc cgcgcaaacg
     1201 tttggagggc ggctatcttt atatcggttc gcctgtgagg caggttcgtc tgctgaccga
     1261 tgaggaaaaa gcctttttga aatattccgc cgcacattat gtgaagctgt cgaaacagta
     1321 cgggatgtga aatcacatcg gcgttcttac gtcagtccca aattcacgcg gttgggatgc
     1381 ccgataacgg tatccgatgc gccttgattt tgaccggctg cgtttgagtt gcaggcaaaa
     1441 atgccgtctg aaagcctttt tttcggcttc ggacggcatt ttattgccga tttcttttta
     1501 gagtttgacc gaatgttcgc gcgtttcgtg gaacacgatg tccggccaac gttcttgcgt
     1561 caaccccaaa ttcacgcggt tgggggcgag gtaggcgagg ttgccgcctg cgtcgatggc
     1621 gaggttgcct gcgttggctt tttcaaattc cgccagtttt ttcttgtcgt cgcacgatac
     1681 ccagcgcgcc gaccagatgg atgcgctgtc gaacacggct tccacaccgt attcgttggc
     1741 gaggcgtgag gttacgactt caaactgcaa cacgccgacc gcacccaaaa tcaaatccgc
     1801 gccgctcatc ggtttgaata cttgaaccgc accttcttcg ccgagttgtt gcaaaccttt
     1861 ttgcagttgt ttgattttca gcgggttttt gatgcggacg ctgcggaaca gttcgggtgc
     1921 gaagaatggg atgccggtaa acgccagttg ttcgccttcg gagaagctgt cgccgatttg
     1981 gatgttgccg tggttcggga tgccgatgat gtcgccggcg taggcttctt ccgccagttc
     2041 gcggttgtgc gacatgaagg ttactacgct ggaggcggcg atttcgcggt tgatacgcag
     2101 gtgtttcatc ttcatgccgc gctcgaattt accggagcag acgcgcaaga aggcgatacg
     2161 gtcgcggtgt ttcgggtcca tattggcttg gattttaaag ataaatccgg aaaatttcgg
     2221 ctcgtccggc ccgaccatgc gcatggtcgc gtcgcgcggt ttcggtgcgg gtgcccagtc
     2281 aatcaatgaa ttgaggattt cctgaatgcc gaagttgtta atcgcagagc cgaagaacac
     2341 tggcgtgagt tcgccggcga gaaattcgtc gagattaaat tcgttggaag ccgcctgcac
     2401 caattcgatt tcgtcgcgca actgctggat ttccaacgga aagcgttgtt ccaattcggg
     2461 attgtttatg cctttgatga tgtcgaactc gtgcggcagg cgttcgccgc ccgcttcaaa
     2521 gagatagatt tcgtcgttca ggatgtggta cacgcccttg aagtttttgc ccataccgat
     2581 cggccaggta acgggcgcgc agcggatttg caggatgtct tccacttcgt ccaagagttc
     2641 caaagaatcg cgcacttcgc ggtcgtattt gttcatgaag gtaacaatcg gcgtatcgcg
     2701 caggcggcag acgttcaaga gtttgatggt ttgcgcttcc acgccttttg ccgcgtcgat
     2761 gaccatcaag gcgctgtcca ctgcggttaa aacgcggtag gtgtcttcgg agaagtcttg
     2821 gtgtcccggc gtgtccaaga ggttgacggt gtggtctttg tagtcgaact gcatcacgct
     2881 tgatgccacg gaaatgccgc gctgcttctc gatgtccatc cagtcggagg tggcgaattt
     2941 gccggttttc ttacctttca ccgtgcctgc gctttgaatc gcgcccgaaa acagcagcag
     3001 tttttcggtc agcgtggttt tacccgcatc ggggtgggag atgatggcaa acgtgcggcg
     3061 gcggcgcact tggtcgagga tttcttggga catggttttc tttgcaaaaa ggttcaggcc
     3121 gcttttcaga cggcccggac agtgtttgag acggcgaaat tgtacaaaaa aatgcctgat
     3181 aattcaatgt tggaggcggt cagtgcgtgc tgccgtaaat ctctttttcg tctttcagga
     3241 cggcatcggc ggtttcccac gcaccgccgt tccatttttt gtaaaagcag ctttcgcgcc
     3301 cggtgtggca ggcgatgccg ccgttttggg cgatgagcat cacaatggta tcgccgtcgc
     3361 agtcgaggcg cagttcgcgg actttttgcg tgtgtcccga ctcttcgccc ttcatccatt
     3421 gtttttggcg cgaacggctg taatagtggg caaagccggt ttcgacggtt ttttgcaggg
     3481 cttcggcgtt catccacgcc accattaaaa cacgtttggt ttcggcatct tgggcgatgg
     3541 cgcaaaccaa acctttttcg tcaaatttga cggcttcaag caggttttta tccatatttc
     3601 ctttcagacg gcatagtcgg ggcggtcaga ggcgcacttc gatgccggct tcgcgcatag
     3661 tgcgtttggc ttcgcggatg gcgatttccc cgaaatggaa aatgccggcg gcaagtacgg
     3721 catcggcttt gccttcggtt atgccttcaa tcaggtgccg gacattgccg accccgccgg
     3781 aggcgatgac ggggatgtcg acggcttcgg caacggcgcg ggtcagcggc aggttgaaac
     3841 cctgtttcgt cccgtccctg tccataccgg tgagcaggat ttcgcccgcg ccgcgttttt
     3901 gcatttcgac cgcccattcc accgcatcca aaccggtcgg attgcgcccg ccgtgggtaa
     3961 agatttccca gcgtgtgttt tcggggttga cggctttggc atcgacggcg gcgacgatgg
     4021 cttgcgaacc gaaaaatccg gcggcttcgt taattaaatc gggacgggta acggcggcgg
     4081 tgttgatgct gactttgtcc gcgccggcat tgagcaggcg gcggatgtcg gcaacggtgc
     4141 gtacgccgcc gccgacggtc agcgggatga agacttgtcc ggcaacctct tcgatgatgt
     4201 gcaggatggt gtcgcggttg tcggatgagg cggtgatgtc gaggaaggtc aattcgtccg
     4261 cgccttcgcc gttgtagcgt ttggcggctt cgacggggtc gcccgcgtcg cgcaaaccga
     4321 tgaagttcac gcctttgacg acgcgcccgt cttttacgtc gagacagggg atgatgcgtt
     4381 ttgccagtgc cataatcgga tgcctttagt cgagggaatc tgccagttgc tgcgcttggg
     4441 caaaatcgat gctgccctcg taaatcgcgc ggccggtaat cgcgcctgct acgccatgtt
     4501 tttcggcggc acacagggcg gggatgtcgt ccaagccggt cagtccgccg gaggcgatga
     4561 cgggaatgcg gacggattgg gcgagtttga ccgtcgcgtc gatgttcacg ccgctcatca
     4621 taccgtcgcg cccgatgtcg gtgtagatga tgctgttgac accgtcgtct tcaaagcgtt
     4681 ttgccaaatc aattacatga tgcccggtta cggttgccca gccgtcgatg gcggccatac
     4741 cgtctttggc atccagtccg acgataatcc tgccggggaa ggctttgcac gcttcgcgca
     4801 ccaagtcggg gtttttgact gccgccgtgc cgataatcac gtcgttcagt cccaaatcca
     4861 aatattgtcc gatggttttc aaatcgcgca tgccgccgcc gagctgcacg gggatgtctt
     4921 tggcgacggc ggcgaggatg tctttgatgg cgggcaggtt ttgcggaacg ccggcaaatg
     4981 cgccgttcaa atctaccagg tgcaggcggc gcgcgccttg ttcgaaccag tgcagcgcgg
     5041 tgtcggcggg cgaatcggaa aagacggtcg cctcttccat cagcccttgt ttcaagcgga
     5101 cgcaacgtcc ttctttcaaa tcgatggcgg gtatcagcag catagttttt ctccttgtgc
     5161 ggggccgtgt cgggcttacc agtttaaaaa gtttttcaac atcgtcagcc cggcatcgtg
     5221 gcttttttcg gtgtgaaatt gcgtggcgaa tacgttgtct ttgccgacga tgcaggcaaa
     5281 cggggacggg tagtcgcttt cgcccaatat ggtttcggga ttttcggggg cgaaatagta
     5341 gctgtggacg aaataaaaac gcgtgttttg ggggatgcct tgaaaaagcg ggtggttttg
     5401 ggtttggcgc acggtgttcc agcccatatg cgggactttc agacggcatc cctgcgggtc
     5461 gcggaggtcg cgggcaaagc gtctgacttt gccgccgaac cagcccaagc cgtcggtgtt
     5521 tccttcttcg ctgtggtcga ataaaagttg cgcaccgacg cagattccga aaaacggttt
     5581 gttttttaag gcatctttga ctgcctcgtc caagccgccg cgcgtcagtg ccgccataca
     5641 gtcgggcatc gcgccctgcc cgggaaaaat gactttgtcg gcgcgggaca cgcggtcggg
     5701 gtcgccgctt aaaaagattt tggtattttt tccggcaagc tgccccgccg tccggacgga
     5761 tttcaatacg gaatgcaggt tgcccatacc gtaatcgata atggcggttt gcatggcttc
     5821 ctcctctttt ttgcaatatg gctgcgattt taacaaacaa atgtgccggg ctgataaaaa
     5881 tgccgtctga aaacgggaat ctgtcttcag acggcatagg gttcaaaccc ggaaagccgt
     5941 ttgtcagcct tccatttgtt ttgcctgaac ggcagtcagg gcgatggtga acacgatgtc
     6001 ttccaccagc gcgccgcgag acaggtcgtt gaccggtttg cgcaggcctt gcagcagcgg
     6061 gccgacgctc aagacgttgg cactgcgttg gacggcttta taggtgcagt tgccggtgtt
     6121 caggtcgggg aagaccaaaa cggttgcctg tcctgccacc gggctgcccg gggctttgga
     6181 tttgcctacg cccggcacgg ttgccgcgtc atattgcagc gggccgtcga tggcgaggtc
     6241 ggggcgtttt tcccgggcaa gtttggtggc ttcgatgacg gtatcgacat cggggccgct
     6301 gccggagttg acggtggagt aggaaatcat cgccactttc gggtcgatgc cgaaggcttt
     6361 tgcggaatcg gcagactgga tggcgatgtc ggcaagctgt tgcgcggtcg ggttcggatt
     6421 aaccgcgcag tcgccgaaca ccagaacctg atttggtagc agcataaaga atacgctgga
     6481 tacgaggctt gcgcccggtg cggttttaat cagttgcaaa gcggggcgga tggtgttggc
     6541 ggtggtgtga accgcaccgg ataccaaacc gtccacatca ttttgcgcca tcatcatcgt
     6601 accgagtacc acggtgtctt gcagttgctt gcgcgcgtct tcgggtgtca ggcctttgga
     6661 tttgcgcagt tcgcacatcg gctcgacgta ttgttcgacc aatgaggcgg gatcgatgat
     6721 ttccaaagag tcgggcaggc tgatgccgcg ttctttggca acggcttcga cttcttcgcg
     6781 tttggcaagc aggacgcagc gggcaatgcc tttttcgtgg cagatggcgg cggcttggac
     6841 ggtgcggggt tctgcgcctt caggcaggac gatgcgtttg ccggcttggc gggcgaagtc
     6901 gatcaggttg tagcggaatt gcgccggcga caggcgtttt gcttcgcggc ctgccaatac
     6961 ggatacgtct ttcagcgcgt cgctcgaacc gaagaaggtc aggccggttt tctcggctgc
     7021 cgcttcggca acggaggctg ccgcaccgtc cacgacaaaa ccttccaata cgcccggcgc
     7081 ggcggcgaag aactgtttgg caaggttcaa ttggtgtgcc agcgcgtcgg catcggtatt
     7141 gtcggaacgg acggcgaaga cggctgccgc gtcaagggac aatgccagtt cgacgttttt
     7201 gcctgcgaga tagattttgt cggcatcggg cgcgatgcct tcgatgacga ggttggcggc
     7261 atcgagtgcg gcaactttgc cgaccagtgc gtcgaaccag tcgtcgcttt tgccttgcgc
     7321 gagcagggtt tcggcggttg cgtcaacggc ttggaaaact tgtgcgtcca gtgcttttgc
     7381 aaaggcttgt gcggcggcgg aggtgttcag tccggcagat acgggtacga cgagtacttt
     7441 tgccataata tatcctttcg tatgctgcgg tgtgcggcat atgtggttgg aaggggcggc
     7501 atatgggcag aaacggctgc ctgcgtgccg tgcgtgccgt gtttggcttg gggcgcgcag
     7561 gttgaatata gcaaacaaat tctgtttcca acaagataaa tatccgcagg cttgtggatg
     7621 ctgccgcctt tcagagggta tttccgggga agaacagggc gggaccgtcc aaatggagga
     7681 cggcggaaat gccgtctgac agggtggggg cggaagggag gttgagcgtg aggacggttt
     7741 gtccggccct gaggctgatt tcggtatgcc gcgctttggg cgtggttttg agaaccacgg
     7801 cgtgaatgga ggcggcgggt gcggaatggg ggtgaaggct gaactgttcc ggacggatga
     7861 gcagtgtacc gcgcgtgcct gcgggtgcgc cgctttggac gggcaggcgg cccaatctgc
     7921 aatcggcggt gccgtcggcg ttgagcgcgg cggggaacac gatgccttcg ccgataaaca
     7981 gggcggcatc aaggtcggca ggttgtcggt acaattcgtg agggcttgcg gtttggagga
     8041 tgcgcccctg tttcatcacg gcaatccggt cggcgtattg cagggcttct tcgcggtcgt
     8101 ggctgacaaa aacggcggat tttccgttgg cgcgcagggc ggcaatcatg tcttcgcgaa
     8161 tctggcggcg caactgttcg tccagcgcgc tgaagggttc gtccaacaaa atcagttcgg
     8221 ggtcgggggc gagggcgcgg gcgagggcga cgcgctgttg ttgtccgccc gaaagttcgt
     8281 gcggatagcg tccggcaagt tcggaaatgc cggtcaattc caacatggct tcgatgcgct
     8341 gtcgctcttg cgccgtcctg cctttgccgt tgccgagacc gtaggcgata ttgcggtaaa
     8401 cggtcaggtg ggggaacagc acgccttcct gtacgaggta acccaaacgg cgttcgcgga
     8461 cgggaaggtt ggtatttttc gagaagatgg ttttgccgga aagcgaaatt tcgccggaat
     8521 cgggttgttc gaaaccggca aggcagcgta aaagggtggt tttgccgcag ccggacgcgc
     8581 cgatgataaa gagaatttcg cccgggtcga ggctgagcga aatgtcgttt aaaaccgggg
     8641 tgttttgaaa acttttggac aggtgtccga tgtgcagggc ggcggtcata gcggtgcttc
     8701 ctcaagctgt tatttgaagg cgtatttctt cagcaggaat acgggtatgc cggaaaataa
     8761 taccagcatc agcgcgtaag gggcggcggc ggcgtattgt gcgtccgatg tgtattccca
     8821 aacggcggtg gagagcgtgt ggacatcgtc ggcggtcagc agcagggtgg cggtcaactc
     8881 tttcatcagc ttgaggaaga cgagtgcgaa tgcggcggta atgccgggca ggatggacgg
     8941 cagtaccaac gtcctgaaaa taaagaagtg tccgcgcccc aatgttgcgc cgacctgttc
     9001 catccctttg gggagttgtt ccaaggaagt cctcagggtg gtttgcgcca tcggcaggta
     9061 aagcatgaaa taggcaagga tgacgacgat aaaggtttgg taaacggcag gggtgtagtt
     9121 gatgctgaaa taaaccaagg atagggcgat aaccaaaccg gggacggcgt gcagtaaaaa
     9181 cggcagcctg tctatccaaa cggttaaaaa attgcgatag cgaaccgatg cccaaacaag
     9241 gggcaaggca cataatatag tcaaaatcgc acctaaagcc gatacgctta aggaacggat
     9301 aaaggcatca aatacggata cgagcgcgaa tgtgccggaa gtgccgacca tcatccaatg
     9361 tatcaatacg ccaaagggga taataatgcc caaaatcaac aagctgctta aaaaaacaat
     9421 cgcgccgatc tgaccgggca gtttgagggt tttgacggga taaggacggg caacgccttt
     9481 gccgctgtgg taaatcttgg ctttgccgcg aaatatgctt tctccaaata cgacgatgcc
     9541 gcacaccgcc gtcaaaacag cggaaagcag ggcggcggta ttgttgttgt aggacatttc
     9601 gtattcttgg aaaatggcag tggtaaaagt ggggtagttc aaaatggata ccgcgccaaa
     9661 ttcgaccagc atatgcaggg cgatcagtaa cacgctgctg ccgatggcgg gtttgagctg
     9721 cgggaggatg gcggaaaaaa aggtttgcag gcggcttttg cccaaggaca ggctgacttc
     9781 ttcgtaagac aggctgatgc gtttgagtgc cgcctcgacg ggcaggtagg cgagcggaaa
     9841 cgaggacagg ctcataatca tcactgtccc ccaaaagcct tcgacgcgga aggtcaggct
     9901 gatccaggtg aaacagctga caaatgcggg gatgcacaaa ggcagggtga ttgccgtctg
     9961 aaaaaaggtt ttgccgaaga agcggtaacg ttggaacaaa agggcgcagg caatgcccaa
    10021 aacaatggaa atcagggtaa cgcccgccat catcgtcaag gtgttggaga gcaaatccca
    10081 catacgcggg cggaacaaca gttcgacggc gcggttgatg ccgacctgcc acgaacgcat
    10141 agcgacatat aaaaaaggca gggtaagcgg cagggcgatc agtaggatga ggccggtaag
    10201 ccaaatgggt atttttttag gagacatagt gtttttcatc ggcaaaacgg gcggacagta
    10261 taaatgtccg cccgtttgac aatccgaaaa cggcttattt cataccggct tgctcaagca
    10321 gccgggtggc gtgttctttt tcggaaacag tggtggcgga cacttggggt gcttccaact
    10381 tggcgatggg ttccaaattg aaggtggata ccacgtgcgg attcaaagga tattcggcac
    10441 ggacggcggt cagggcgcgc tgtccttcct tgccggcgag gaaggcgacg aattttttcg
    10501 cctcatcctt gttttgggag gattttaaca cggctgcgcc ggaataggta acgagtgcgc
    10561 cgggatctct gtggcggacg aaattcaggc gggtgtggac attttgtacg cctttttcac
    10621 gcgcgaaagc gtgccagtag tagttgttga tgagggcggc atcgatttcg ccgttttcaa
    10681 ccgcttgaag ggcgacggag tttttagcgt aaggcttgcc gtattctttc aggcctttga
    10741 gccatttcaa tgcggccgct tcgcctttca gtttgacgat ggcgacaatc tgttccaaga
    10801 acgcgccgga agtggggacg taaccgatgc ggtttttcca tttcggcgtg gcgtaattca
    10861 ggacggattt ttccaaatct ttttcagaca gtttgcgggt gtcgtaaacg acgacgcgcg
    10921 aacgtccgct cagtgccacc cagtcttttt tggcggcaac cggcacgcct ttgccgcgtg
    10981 tttcgttgat ggtggaggcg ggcaggggct ctaggaggtt ggctgcggaa agggtggcga
    11041 gtgccgggat ttgttcggaa tagaatacgt cggcggggct tcggctgcct tcttctttga
    11101 tttggccggc aagctggtcg cctttggcac tgttgagttt gactttgatg ccggtagccc
    11161 gggtaaaggc atctgcaacg gcttgtgccg cttctttgtg ttggccgttg tacacggtaa
    11221 tgtctgccag cgcgggggtg gtggcggtca gggctgcggc aagcagtgcg tatcggatag
    11281 atgttttcat atcgattttc tcctaaatga atgagggtgt ataccttgtt aagacataac
    11341 ggggtgtagt gtattccttc ttttttataa atgcaaataa ttatttttta aatttgttat
    11401 tatccgatcc ggttattgtt tgttctgact tgtatttttt ccgtgcatcg cgcccgtaag
    11461 gcggaagcgg cgggcaatgc gtggcggaat gtgggtaaag gcggcatttt gatttgtcgg
    11521 aatgctggag aacctctccc tttaaaacgc cgtctgaaca aggttgccgg aatagtattg
    11581 ccatcccggc agatacagtt tgtcgggatc ttgccaatat tgttcatcca gactgttcgg
    11641 cagcgaggcg gttttgttgt cgagatgttt tgttaatcca ctatatatcc cacatttctt
    11701 ttaggttttt accttccgat tggaggtggc ggatttcttt tcccaatgcg tctgccgccc
    11761 gatggatcag cattgcgctg tgtaccgcgc cgattttttt cagaacggaa caagtctttt
    11821 cggcggcggg aaaaccccag ttgcagacaa attgcagtat gccgccgttg ccgatgtcgg
    11881 cttccgcccg ccaaatcaaa accagctcct gttcccgtcc gtccatgctt tcgagtttgc
    11941 cgtcatgctg ttcaaaaagt ttgtccaccg cctgccgcat catctgctcg aagcggtcgg
    12001 cttgggtatc cgtatcggtc ataatattct tgccttttaa aaatgccgtc tgaacatttc
    12061 ttcagacggc atttgggggt taagctgaca tttcccgcca gcgtttgact tggaggcgta
    12121 cctgttcggg cgcggtgccg cccaagtggt tgcgcgcgtt gaggctgcct tcgggtgtca
    12181 gaacgccgta cacgtcgtct gaaatcagct tgctgaagcc ttgcagggct tcgagcggca
    12241 attcgctcaa atcaacgccg gcttcatcgg cgtggcgcac ggcttgggca acgacttcgt
    12301 gggcatcgcg gaagggcata ccttttttga ccagataatc cgccaagtcg gtggcggtgg
    12361 caaaaccctg catcacggcg gcgcgcatat tgccgggttt gacggttacg ccgcgcatca
    12421 tatcggcgta aatccgcagc gtgtcgatga gcgtgtcggc ggtgtcaaac agcggttctt
    12481 tgtcttcctg attgtctttg ttgtatgcca agggctgcga tttcatcagg gtaatcaggc
    12541 cgataaggtg tccgatgact cggccggatt taccgcgcac gagttcgggt acgtcggggt
    12601 ttttcttttg cggcatgatg gacgaacccg tacagaagcg gtcggcgatg tcgataaagc
    12661 cgaaacgcgg actcatccac aaaatcaatt cttcagacag gcggctcaag tgaaccataa
    12721 ccagcgaggc ggcggcggtg aactcaatgg caaaatcgcg gtcggatacg gcatcgagcg
    12781 agttctggca gatttgttcg aaacccaaca attcggcggt gatttcgcgc tgaatcggat
    12841 aggtcgtacc ggcaagggcg gcagcgccga gcggcatacg gttgacgcgt ttgcgacagt
    12901 cggccatgcg ttcgaaatcg cgtccgagca tttcgacgta ggcgagcatg tggtgtccga
    12961 agctgaccgg ctgggcgact tgcagatggg taaaaccggg catgacggtt tcggcgtttt
    13021 gttccgccaa atccaataat gccgtctgaa ggttttgaat caggttttgg ataacggtaa
    13081 tctggtcgcg cagccaaagg cggatgtcgg tggcgacttg gtcgttgcgg ctgcggccgg
    13141 tgtgcaggcg tttgcccgcg tcgccgattt tgtcggtcag gcggcgttcg atgttcatgt
    13201 ggacatcttc caaatcgagc ggccattcga ttttgccgct gcggatttct tcgaggattt
    13261 ccgacatgcc ccgacggatg tcggtcagat cgttttcact cagcacaccc gaccgggtca
    13321 gcatctgcgc gtgggcgagc gagccttgga tgtcccattc ggcaaggcgt tggtcgaaac
    13381 cgatggaggc ggtgtattgt ttgacgagtt cggaaacggg ttcgttgaaa cgtccggacc
    13441 aggttttgtc gtgcataagg attccttgat ggggttattc ggtgcggtat ttttccaaaa
    13501 ggcggcggaa gggttcgccg gtttcggggt gttttaaacc gtaggcgacg gtggcttcga
    13561 gatagccgag tttgctgccg cagtcgtagc gcgtgccttc aaaggggtgc gccaagacaa
    13621 attcgtgatc gagcagcttg gcgatgccgt ctgtaagctg gatttcgttg cccgcgccgc
    13681 gcggcaggcc ggttaaaagg tcgaaaatgc gcggggtgag gatgtagcgt ccgacaacgg
    13741 caaggttgga gggcgcgtct tcgggcttgg gtttttcgac aatgccggta atgcgttgga
    13801 actgtttgag ctgttcggtt tcgacgatgc cgtatgagcc ggtttgcgac ggttcgacgg
    13861 tttctacgcc caaaatgctg ttaccgctgc gcccgtacac ttcgaccatt tgtttgagcg
    13921 cgcctttggg cgcatcgatt aagtcgtcgg caaggatgac ggcgaagggt tcgtcgccga
    13981 tggcggcgcg ggcgcacaag acggcgtgtc ccaatcccag tgcttccgcc tgacggatgt
    14041 agaggcaggt aatgttcggc ggcaggatgt tgcggacgtg ttccaacaat ttgtctttat
    14101 ggcgcatttc caacttagtt tcgagttcgt atgccttgtc gaaatggtct tcgatgctgc
    14161 gcttgttgcg cccggtaaca aacaccattt ccgtgcagcc ggcttccacg gcttcttcta
    14221 cggcgtattg gatcagcggc ttgtcgacga tgggcagcat ttctttcggg ttggccttgg
    14281 tggcgggcag gaagcgggtt cccatccctg caacggggaa gacggctttt tttatcggtt
    14341 tcattctttt tcctttgtat tgttttgatg tttaaagggc gagtttgcga attaaatcgg
    14401 cgagtgcctg cgcgcggtgg ctttcgcggt ttttgacctc cgaatccaat tcggcggcgg
    14461 ttttgccgtg ttcgggcaga taaaaatacg ggtcgtaacc gaaaccgttt tgcccgagcg
    14521 gcgtgtcgtg ccattgtccg tgccatatgc cctcggcgat aatcgggcgc gggtcgtctt
    14581 tatgacggac aaaaaccaat acgcagacat aagaacaact tttgtcggcc ttgccggcaa
    14641 gttcggcggc aagtttcagg ttgttggcgg tatcggattt gggattgctg ccggcgtaac
    14701 gtgcggaatg gatgcccggc gcgccgttta gggcggcggc acagatgccg ctgtcgtcgg
    14761 cgagtgcggg cagcccgctg tgtccggcgg cgtgccgggc ttttgccagc gcgttttcga
    14821 caaaggtggg atagggttcg gggcattcgg gtatgccgaa tgcggattgc ggcaatacgg
    14881 tgatgccgta aggtttgaat aagttgccga attctttgag cttgccggca ttgccgcttg
    14941 ccaaaacgat tttttccggt ttttcagaca tagcggtttc cctgtgatga agatggggcg
    15001 gcgcgtaggg atttgtgccg caggtagagg gcgagtgcgc cgatttgccc gaacagcgcg
    15061 ccgaatgcga aaaggaagga cgcgacggcg aaggctttgc tgccggcggt cagcagataa
    15121 gcacccaaga ggacgggcag cataaatgcc agtgtgaaca aggcaacaga caacagatag
    15181 atttttcggc ggttcatggc gttcggtcgg aaacgggatg ttcggattat agccgattag
    15241 gacggcattc cctagaggct ggaaaaatgc cgtctgaagc ggcgttcaga cggcatggcg
    15301 ggcattatgc ctgtttgttc caacgttcga tggattcttt gatgactttt ttcgcttctt
    15361 ccgcaccgcc ccaggattcg actttggtcg tacccgcttt tttcaggtct ttgtagtggt
    15421 tgaagtggaa ctcgatttgt ttgatgagct gttgcggcaa atcggacaaa gttttgtagg
    15481 cgttgccgtt attgcggtcg tcggcaggta cgcagacgat tttgtcgtcc acttcgccgt
    15541 cgtcgacgaa tttcatcacg ccgataacgc gcgcttccaa gaatacgccg gttgccagag
    15601 gttgttcggt aacgagcaac acgtccaatt catcgccgtc ttcgtccaaa gtttggggga
    15661 tgaagccgta gttggtcggt ttggcgaaga tggcgggttc gatgcggtcg agttggaatg
    15721 cggcgagttt gcggttccac tcgattttgt ggttgctgcc ggcggggatt tcgttgacga
    15781 cgttgatgat gccgccgtcc acgtcgcccg gggtcaggat ttggttgaag tctgccattt
    15841 ggtttccttt atttgggaag gtttgaagtt tgaaagtata gcacaaacgt ccggctggaa
    15901 atgcgtccga tgccgtctga aagggaaacc gggcgcgtgt taccgtttgc ccaaaaacct
    15961 gcccagttcc aaaatcgcgc gcctgttgga cggggaaaac actttttccg ccgcttcttc
    16021 caagccgaac cagccgtagg agacgtgttc ctcgggttgc aggacgacgg gcgtatcgcg
    16081 cgggatttcg gcccggaaga cgtgttcgcg gttttcaaac acgcctttgg ggtagcggtg
    16141 ccgccagtgg tggtagattt cgtaaaccgt gctgtcgtgc cggtcttgga gctgcccgtc
    16201 ctccagcagg atgccggttt cttcccaaac ttcgcgcctt gccgtttggg cgacggtttc
    16261 gcccggttcg aggctgccgg ttaccgactg ccaaaatcct ttcggatgcg tgcgttcgat
    16321 gagcaggatg ccgccgtccc cgctataaag gacgaccagt gcggaaacgg ggtatttgag
    16381 cggttttgcc atcggcatct ttcggcgggc tgcggtaatg aaggggcgga ttatagcaaa
    16441 cgccgcacgt tatggcgttt atccttttcc gtatcctttt ttctgcacgg atgggacgcg
    16501 ccggtgtttg ccggtaaatt ttcctttgtg tcaaaaagat aagggcggtt gtgattttaa
    16561 tgcttgccaa agtgacgggc ggaaactata atccgcgact taccgagtcg gagtgtggcg
    16621 cagtctggta gcgcacttgc atggggtgca aggggtcgaa ggttcgaatc ctttcactcc
    16681 gaccaaaaat tccgaaagcc gctttcaaaa gcggcttttt tgccgtccgt atgattatga
    16741 tgtagagtac gcggcgacag acattcaaat gccgtccgaa aaccgttcag acggcatctc
    16801 tttatcttaa tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca
    16861 aatagtacgg caaggcgagg caacgccgta ctggtttaaa tttaatccac tatagtttca
    16921 ttccgtacca tcttaaggaa catcaaattg ggcatttccc gcaaaatatc ccttattctg
    16981 tccatactgg cagtgtgcct gccgatgcat gcacacgcct cagatttggc aaacgatccc
    17041 tttatccggc aggttctcga ccgtcagcat ttcgaacccg acgggaaata ccacctattc
    17101 ggcagcaggg gggagcttgc cgagcgcagc ggccatatcg gattgggaaa catacaaagc
    17161 catcagttgg gcaacctgat gattcaacag gcggccatta aaggaaatat cggctacatt
    17221 gtccgctttt ccgatcacgg gcacgaagtc cattccccct tcgacaacca tgcctcacat
    17281 tccgattctg acgaagccgg tagtcccgtt gacggattca gcctttaccg catccattgg
    17341 gacggatacg aacaccatcc cgccgacggc tatgacgggc cacagggcgg cggctatccc
    17401 gctcccaaag gcgcgaggga tatatacagc tacgacataa aaggcgttgc ccaaaatatc
    17461 cgcctcaacc tgaccgacaa ccgcagcacc ggacaacggc ttgccgaccg tttccacaat
    17521 gccggcgcta tgctgacgca aggagtaggc gacggattca aacgcgccac ccgatacagc
    17581 cccgagctgg acagatcggg caatgccgcc gaagccttca acggcactgc agatatcgtc
    17641 aaaaacatca tcggcgcggc aggagaaatt gtcggcgcag gcgatgccgt gcagggtata
    17701 agcgaaggct caaacattgc tgtcatgcac ggcttgggtc tgctttccac cgaaaacaag
    17761 atggcgcgca tcaacgattt ggcagatatg gcgcaactca aagactatgc cgcagcagcc
    17821 atccgcgatt gggcagtcca aaaccccaat gccgcacaag gcatagaagc cgtcagcaat
    17881 atctttatgg cagccatccc catcaaaggg attggagctg tccggggaaa atacggcttg
    17941 ggcggcatca cggcacatcc tgtcaagcgg tcgcagatgg gcgcgatcgc attgccgaaa
    18001 gggaaatccg ccgtcagcga caattttgcc gatgcggcat acgccaaata cccgtcccct
    18061 taccattccc gaaatatccg ttcaaacttg gagcagcgtt acggcaaaga aaacatcacc
    18121 tcctcaaccg tgccgccgtc aaacggcaaa aatgtcaaac tggcagacca acgccacccg
    18181 aagacaggcg taccgtttga cggtaaaggg tttccgaatt ttgagaagca cgtgaaatat
    18241 gatacgaagc tcgatattca agaattatcg gggggcggta tacctaaggc taagcctgtg
    18301 tttgatgcga aaccgagatg ggaggttgat aggaagctta ataaattgac aactcgtgag
    18361 caggtggaga aaaatgttca ggaaacgaga agaaggagtc agagtagtca gtttaaagcc
    18421 catgcgcaac gagaatggga aaataaaaca gggttagatt ttaatcattt tataggtggt
    18481 gatatcaata agaaaggcac agtaacagga gggcatagtc taacccgtgg tgatgtacgg
    18541 gtgatacaac aaacctcggc acctgataaa catggggttt atcaagcgac agtggaaatt
    18601 aaaaagcctg atggaagttg ggaggtgaaa acgaaaaaag gtgggaaagt gatgaccaag
    18661 cacaccatgt tcccaaaaga ttgggatgag gctagaatta gggctgaagt tacttcggct
    18721 tgggaaagta gaataatgct taaggataat aaatggcagg gtacaagtaa atcgggtatt
    18781 aaaatagaag gatttaccga acctaatag
//
LOCUS       DAWXHA010000032        18721 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.032, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000032 DAWXHA010000000
VERSION     DAWXHA010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18721
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.032"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            679..1530
                     /locus_tag="AABD07_000837"
     CDS             679..1530
                     /locus_tag="AABD07_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355407.1"
                     /translation="MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTV
                     DLHCKSRGVTKRYTPTASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAI
                     RKTGGCQVGPKTTADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRFNVESIEDLPAGK
                     LPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALADIAAMVYYGTRMIESG
                     KDVSAPLKQLGCRQAVTMWTVWHETRSILKRSAAALEVLRGYANKDASDRIAACLEGI
                     YSKATVR"
     gene            complement(1567..1728)
                     /locus_tag="AABD07_000838"
     CDS             complement(1567..1728)
                     /locus_tag="AABD07_000838"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355408.1"
                     /translation="MDLTMSAEEFCRKQIAYWLNESRKASDNADLKAFEFAGREPADY
                     REMLKRYAA"
     gene            complement(1719..2393)
                     /locus_tag="AABD07_000839"
     CDS             complement(1719..2393)
                     /locus_tag="AABD07_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355409.1"
                     /translation="MNLKALIARFRVLANDKAEPYFWSDEEVSGWLNDAVHEACLRGR
                     LLHSDDAFVTDVEKGRPLYAYAAGGFAAGYAYEIDSIRFVSDGKPVCLKLVSPEAADV
                     CAPGWRDGAQTGLPVYAVQGDGKLTLAPAPDRDGRLFAGGYCLPRDMAGDGDEPEINS
                     IHHRNLVYWALAEAFSIPDAETFDPQRSESARRRFELYFGLPADSDLRRITREDAPHL
                     NRHFWI"
     gene            complement(2390..2875)
                     /locus_tag="AABD07_000840"
     CDS             complement(2390..2875)
                     /locus_tag="AABD07_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355410.1"
                     /translation="MKRRPGICLCGVAVFDNAVRTAAGGWMDKVFIKYIGGRAVWRDR
                     IYHTGLVFEDGQVREVSAGAAAKLLRHGDVFAAVPGKRVEKADDTEALEKAGASELER
                     ETAAFDAVQDVILQINRMGKDELELYAKANYGQGLDKRKSAENLRGDVVRMVRQFGIA
                     Q"
     gene            complement(2881..3354)
                     /locus_tag="AABD07_000841"
     CDS             complement(2881..3354)
                     /locus_tag="AABD07_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355411.1"
                     /translation="MAEIYVKNNGGNRFGGVPYGNLAAEHYRIVAKQDGAILGADASE
                     PPKAGDVLALGVLEQGFRLDDAQIIVKTAMSSGITADVGFAYADGADDAKVPQDAAYF
                     ASGADFASAGRIRCQSAKLVTLPKQALLTVTLKGAENKKAADIDILIYGEKFGQL"
     gene            complement(3409..4701)
                     /locus_tag="AABD07_000842"
     CDS             complement(3409..4701)
                     /locus_tag="AABD07_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4043 family protein"
                     /protein_id="HFB2355412.1"
                     /translation="MAQKTNTAYGDPQAMMKQAAGLFAMHMQRNSTLNRLAGKMPAGT
                     AGAEATLRKQTTQHMPVVRCQDLTRGMGDEIRFNLVNPVSALPIMGDNTAEGRGVGMS
                     LSEAGLRVNQARFPVGGGTMTNQRSPADYRALIRPAAQSLMDRYADQTLLVHMAGARG
                     FHDNIEWGVPLAGDPKFNDYAVNPVKAPSKNRHFTASGDAVTGVGDNGGELKIASTDL
                     FTMDTVDSMRTVLDQIPLPPPIVKFEGDKAAGDSPLRVWLLSPAQYNRFAADPKFRQL
                     QASAIARASQANQNPLFLGDAGLWNGFILVKMPRPIRFYAGDEMKYCADKFSEAESGL
                     KIPASFADKFAVDRSVILGGQAVLEAFANTGKHGGMPFFWSEKELDHGNRVETLVGTI
                     RGVAKTRFAVDVGGGAKEITDYGVTVVDTVVPLHGGIR"
     gene            complement(4722..5234)
                     /locus_tag="AABD07_000843"
     CDS             complement(4722..5234)
                     /locus_tag="AABD07_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355413.1"
                     /translation="METADGSDNSLFGDFSDEDVKKGVEKLIQEKLAGYEADMKRQEA
                     AKAHYREIYTAHPDADSIVESRELEEWLAGQNPLVRKAFNDALKDGTAAEVIGAFDMF
                     KAAKSAAEPEKPAEKPPAGKNTPNTLSDIPAGRDHTASDGPPDYLSGNALAEKLASMT
                     EEQVEKFLNS"
     gene            complement(5327..12628)
                     /locus_tag="AABD07_000844"
     CDS             complement(5327..12628)
                     /locus_tag="AABD07_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLxRFG domain-containing protein"
                     /protein_id="HFB2355414.1"
                     /translation="MSDLVRYDPLEHGRLVGGLKEYRGFTQKDARAAADDTALTRGFK
                     NSMRSARMGWNALTGDKEELGRLKAEDMDYRKIQEGRKSQARRELGEAWEKGGGVGGG
                     LSNVWGELKKDWREKGLDGALEDVGEMAGAVLEQAPNALVPIATTTAGGILGALAGGN
                     AAVGAYAGATLGNTLMEYGGQLDRAAEAAGVDPADKDAVMAFIGRGAPGALKNAAVKG
                     AVVGAADMAAMKLGGSILNMGKKAAGKAALEKMGVAAAVAAAKGTPEFAALAKESAKG
                     GLGGAARHAAAYATESAGEFAGEYLGTGLANGEWDEKGAALEAFSSLGHSAVGFAGTK
                     AYAAVTDPLRPPAGRKAGAEGGIGGNRKAGRPAPEGAQALRAAADGGAEQGGAGFDTA
                     HHDQSHPALRQFADRTKQEEAGRFFSGPADGNTPRAEELARGTEKQPDVSGIPSEDGA
                     EFLDTGVMPDGLARQYADMAAEYRAKPSEAMGINPDDGAVSAAAALAADSGAAVPSAV
                     SDDMEARSVADDVPSGRSADADRGGVPSAYGNVRPGGAPRGAASVAPGGSAAAASGGI
                     ARVSPLPAGQYFDGLDTRGRKALAKEAGLDIKGVADFGQIAAPVRRKIEQAYHARIEA
                     DYQAASEAKQGYLPPPVRMADAVPVPKKGFSVPADALDKESRRRFDALPEWVRRHAQT
                     VADYTADGIMRREAGMADMRGHYPEGLAESAGAVRAYRAQHPESADVLDRLNRAVYGY
                     RRNNGWSVPLLSREGERLQGVRTALPDDGASEAVVGGGRGLTRALPTEDKGLAQDVRQ
                     DVRQGLTQGGRGLTPDAGADANAAALQGLPGSAVASGNAPARRQNLQVRARAEGAAPG
                     LSASENLAGTDGGKRAPVAGKRPDTVLPVLNPQVAESAGRVSPKKRMADAAADFTRRL
                     AADRRRPEKAGVPLGGGEYRFEHTDRRHIDALAGVPGRPGKGGMPEEFADMAGPSNSD
                     GLVSDGRRYLKGREAETLRAGGLSEAVPSEPGRDYRPTQEARAPAKVMARPRDAASAG
                     KPAGRAQPARAKDAPVAGKAAAAKNAATEKPSSDKVRNIEAGKSHFDGGKGKSAAAQG
                     AATEKPSSDKAAEPETFAKTALDNPEEARRKARVLQGGPVYTVKGRQAPQGFKALREH
                     AENIKKRLAESIGGLAERVDVAAVSETAPDKAQMLLSQRVEGWFDGRTGKITLVAENL
                     TPERAVWAAWHELGHRGFAADGFAKYREELERADGNGLIRRIADAVQEGREGTGDAAA
                     SVRPAAVEEAVAELYAAQRTGGWAGIENRYGVKVGNGLKRGIAGVLARIGALLRRVLQ
                     RLAGKAGGAMSDADVFAMLADLHGNVEGARDAPWGGNHRAVMFARAEDGAAERSKSES
                     LEKLRRAETIRISGREVPEGGNLREYKRNALEYGKSLRGPYVNKDTGREISLGRSGIT
                     EILRHDYKDAEHLQSIAAIPQIIENAVYIDTLPNEDLAKNGDIQGYEYYVSGLNVGGA
                     DYTVRAAVAVSRNGNRYYDHKLTKIEKGNLLSLLDRVSTTGASESKSPLSGIDDKRLL
                     QILQDKDAGKGGIADFDTEAVRFSRAANIGAAIGHITGKKSDLRNALKDRWDASKGIQ
                     LQFLGRRQIEDIYGGVLDGLKEYGRLSELFGADANKAVTEADKVVREWGRLKEEDAKA
                     LADLMHDATLAKVDADPLMRKDARGRLDGIRTALDIADGKIAKAEAAVASAGARIARA
                     DAAVRKAQRAADKAAYALEKAQEKHGREILADEADMRLRRLFYADSEAKRALRRAGAD
                     AAAESRAKTDAVRMSEQARADVKRLEKDEVGAQKALEGLALLNRRFAGLPDAAQRVYR
                     KARDDYRAHFGQVRDALAERLARAGQDAETVRRLKERFDNELGGVYFPLARFGDYLVV
                     VKDADGNSANVSRAETLSEAEKLRDALKADFGAGFKVSPVMKSRDYIRSRDAVGSGFM
                     KELGEAVGRMDLDPAQRARLNDTLTQLYLNSLPDTSWAKHGIHRKGVPGFSDDARRAY
                     AQNMGSGANYLAKLRYADRMAEQLDVMQDFVDGRKYEEGFDQRQLQRVADEMRKRHEA
                     VMNPNPSKLAQALTGFGFLWMMGMSPASAVVNLSQTAMVAYPVMAAKWGYAGAARELL
                     RASKQIGLRFGEKFNTIEDSLNEDEKAAFRKAADYGVIDLSQAHDLAGVANGDPGLAG
                     SAWQKVMDKAAWLFHHAEKFNRQVTFVAAYRLAKRAGADSEAAFEQAKKATYDWHFDY
                     AAQNRPRFMMGNAAKVVFLFKQYSQNILYALGRNAYLAFKGDKEARKTLAGLLVSHAM
                     ASGILGLPFVSTLLAVASMLGSDDDDPWDAEAALRNMLADAFGDKAGEVLAKGFSRLT
                     PLDVSGRLGLNQLVFPDIQDGLEGKKWAESLVVGSTGAVVGAGIGAADGVRTRSSVPR
                     TANTLSLMKSW"
     gene            complement(12625..13821)
                     /locus_tag="AABD07_000845"
     CDS             complement(12625..13821)
                     /locus_tag="AABD07_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355415.1"
                     /translation="MGLFEPSAGDFWEMKEKEKKEKARKGAEERERAAAQAHRADAVR
                     RTVANYEAGPARYRNVMDLSRNNIEDGARRLRRAGAFERGADAGLGFSGGDKALSPDA
                     RAGADFARRDTRPTDAGGRTPPPLGFDGNVYRDGKPVRDFDAQRPLVSAGPDALSPEE
                     RELYRRATTPYAGALNGQLTAAQLNAARGIVAEHNKNAAVRELGRERLAAAAAENAAN
                     REAVLQKGRFDAAVKANEGALNREMAQRNADRAFDVQQAELGMKRQGFEMKREADALE
                     LEDRKRIADLTRAYGFAKSDGQRGEIARQIDALNGKFERQGEKGFDPNVFKTISYEVA
                     DPDTGLTAKREGIVDLRTGKPLDVEFAGEREKRYAALGFKPNGQKTAGGKIIYENEKG
                     EKRVEQ"
     gene            complement(14058..16310)
                     /locus_tag="AABD07_000846"
     CDS             complement(14058..16310)
                     /locus_tag="AABD07_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355416.1"
                     /translation="MGTDVPETGVLPDKNGEPLTIGEYRLFVGEMMNQPAWRAVADKE
                     MDYADGRQLDNELLQKQRELGLPPAVENLITPTLLSVQGYEATIRTDWRVTADGETGG
                     RDVADALNFKLNRAERQSRADKACSDAFRGQIACGIGWVEVTRNPNPFEFPYECGVIH
                     RNAIHWDMKSYKYDLSDARWLIRRRWLLPERLAQFFPEYAGHFKAMGRGGSDWRISGE
                     MLDGGGNTGLADAWGISGRNTVSEEFWFNETTRELAVAEVWYRRWVTADCLRDKKTGR
                     TVEFDGANPNHREMAANGALLFAASVPRMRRAFVVGDLVVRDEPTPYPHQKFPYVPFF
                     GFREDNTGIPYGYVRNMKYAQDNLNSTNSKLRWGLSAIRTVRTKGIVDMSDEQFRRNI
                     ARVDADIVLNKIEAAQPGARFDVSRDFELSAQHWQMLQDSRATIRQISGITPSFMGNR
                     GNATSGRQESIQVEQSNQSLGLVMDNFRQSRSLVGELLLAMIIEDLGSDEQTVVIEGD
                     AVTQGRTVVINRPETDPVTGKAYLSNDLQNIRLKVALEDVPSTNSYRSQQLGAMSEAV
                     KSLPPEYQAAVLPFMVSLMDIPFKDKVIEKIKEVRVQETPEQIEARIAQAVQDALAKS
                     GNDIKRRELALKEQRTASEIKEIEARAVQIGVQAAYAAMQAGGQIAAMPQIAPVADAV
                     MQGAGYVRPARGDDPGFPVPAMPPETQIPPEGIPEAYGADTGPMTAVPPKSANHAQTG
                     METPTVSDNL"
     gene            complement(16310..17584)
                     /locus_tag="AABD07_000847"
     CDS             complement(16310..17584)
                     /locus_tag="AABD07_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HFB2355417.1"
                     /translation="MTGKTVDLKLPAKLDGLFKPCRYKVMYGGRGGGKSHGAASALLA
                     LGAQRPLRILCAREIQKSMRDSVHRLLKDKVAQLGLGHFYEITDFEIRGANGTLFVFS
                     GLQSHTVDSIKSFEGIDIVWVEEGHGVSKKSWDVLTPTIRKEGSEIWITLNPDMETDE
                     TYRRFIAMPSEDTWLCEINWRDNPWFPEALNRERLKAQRSMNKEDYGNIWEGRPRMVS
                     EGAVYRHEIQDAFHSGRVTLVPYDSSLPVHTVWDLGWNDAMTIGLVQRDLTSVRIIGY
                     IEDTHRTLDWYVAELEKLPYRWGTDFLPHDGRTRNFQTGKSTMEILTGLGRKSVFVQN
                     AAGIEEGIRAARMLFPKVYFDKDKTARLLECLKRYGRQIHAKTGVAMGPLHDEYSHGA
                     DMFRYLAQAVDLMDTGSNTGYTETPVSDWRLY"
     gene            complement(17565..17807)
                     /locus_tag="AABD07_000848"
     CDS             complement(17565..17807)
                     /locus_tag="AABD07_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355418.1"
                     /translation="MAENLSKSAEQIVAELYGSPEDTFTKARMFQTVAAGFKVLVEIE
                     RKSYGMDTAESKISESAKTAGIRIEFVGPEDDGKDG"
     gene            complement(17862..18104)
                     /locus_tag="AABD07_000849"
     CDS             complement(17862..18104)
                     /locus_tag="AABD07_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355419.1"
                     /translation="MPRLSDEDWRKVELDYRRGVLSIAEIGRKYNVSAQHVGRVAKER
                     VWTRDLNDEVQAKARAMVLSADKNGNAPDYADFNLK"
     gene            complement(18104..18526)
                     /locus_tag="AABD07_000850"
     CDS             complement(18104..18526)
                     /locus_tag="AABD07_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355420.1"
                     /translation="MSGLSDIDKVYQGVVDLHNAEQVVSREALAETTGLKMSEITKFT
                     KLLVEHGKIYRVTRGIFKPAIGFGETRPVSVSVLDSGMGVLEIGDTVLHLNPQEMRSL
                     GALMSGFGQQFSSIQMGREFSVLRNYLECSAKNGRLDF"
     gene            complement(18591..>18721)
                     /locus_tag="AABD07_000851"
     CDS             complement(18591..>18721)
                     /locus_tag="AABD07_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFB2355421.1"
                     /translation="PSKKWQARIMVNRKNKILGLFEHIEDAVKAREAASKDFGFVV"
BASE COUNT         3842 a         6604 c         4429 g         3846 t
ORIGIN      
        1 atagcccgac cgccgccaag ccgcaaactt ggcggcttct ttatgccgtc cgaagggctt
       61 tcggacggca tttttctttg attttgttgg gggaatggtt gactttgaac gtgtccacgt
      121 ttataattca attcatcggc gcatcgggtg ccgatacggg aagagcccca ccgaagcggg
      181 gcttgtacag ggagtaggaa aatgaagctc atccttcaaa ttctcatcct ggttttaatc
      241 ttgatgctgg caggcgatac gcctattagc ggataaaacc ggctggggcg gtagccgccg
      301 ccccagtccc tatcttacaa aaggcagttc aaaaaatcaa ggagtttgcc tatggttaat
      361 gaaaaactgg cagaaaaccg aaagcgttac gagcaaaaac gagtcattaa aaaagtctcg
      421 tttaatgcgg aaacagaaaa agagcttttg gaatatgccc aaaatctcga tttttcccaa
      481 tgggttaaat caatcataaa agaaaaaatc aaaaagtaat tgactttgaa cgtgtccacg
      541 tttattattc ttacaacggc acagccgtta atggaaaacc gaaccaagcg ggaacttggt
      601 tcggttaagt gaaaagcagt tctaggaaaa ctcttttcgc gtcttttaaa taacctctaa
      661 aagaaagact attctatcat gaatgctgtc caagttttaa actttcaaca aaactccgtc
      721 cgtactgttg ccgataacaa aggcgagttg tggtttttgg caaacgatgt ttgcgagatt
      781 ttaggctaca ccaaccctcg ccgaacggtt gacctgcact gcaaaagcag gggcgtaaca
      841 aaacggtaca cccccaccgc cagcggcgaa caggagatga cctatattaa cgagccgaat
      901 ctctaccgct tgattatcaa atcccgcaag cctgccgcag aagcgtttga agaatgggta
      961 atggaaaccg tcctgcccgc catccgcaaa acaggcggct gccaagtcgg accaaaaacc
     1021 accgccgacg accgtaccgg attgcgccgg gccgttgccg cgcttgccgg gcgcaaaggc
     1081 atagactact cctccgcgta cagtatggta catcaacgct tcaacgtcga atccatcgaa
     1141 gacctccctg ccgggaagct gcccgaagcc gtcgcctacg tccacgcatt gacactgcac
     1201 acgggcttga cgggcgaagt ccttgaccgc gaaccgttac ccgcgccgca acccgccctg
     1261 cccataagcg gcaacgcttt ggccgacatt gccgctatgg tttattacgg cacacggatg
     1321 attgaatcgg gcaaagacgt ttccgcaccg ctgaagcagc tcggctgcag gcaggcggtt
     1381 acgatgtgga cggtttggca cgaaacccgt tcaatcctga aaagatccgc cgcggccctc
     1441 gaagtgttgc ggggatatgc gaacaaagac gcctccgacc gcatagccgc atgtcttgaa
     1501 ggcatttaca gcaaggctac ggtaaggtaa acggaaaatg ccgcccgaat cttcggacgg
     1561 catttttcac gcggcatagc gtttcaacat ttcccgataa tccgccggtt cccgtccggc
     1621 gaactcaaag gccttcaaat cggcgttatc tgatgccttg cggctctcgt tcagccaata
     1681 ggcgatctgt ttcctgcaaa actcttcagc actcatcgtc aaatccaaaa atgcctgttc
     1741 aggtgcggcg catcctcacg cgtgatacgg cgcaaatcac tgtcggccgg caggccgaaa
     1801 tacagctcga aacgcctcct tgccgattcc gaacgctgcg ggtcgaaagt ctccgcatcc
     1861 gggatactga aagcctccgc caaagcccaa taaaccaaat tccgatgatg tatggaattg
     1921 atttccggct cgtccccgtc ccccgccata tcccgcggca ggcaataccc cccggcaaac
     1981 aacctgccgt cacggtccgg cgcaggcgca agcgtcagct tcccgtcgcc ctgcaccgca
     2041 taaaccggca gccccgtttg cgccccgtcg cgccaacccg gggcgcaaac atccgccgcc
     2101 tccggcgaaa ccaacttcag gcacaccggc ttgccgtcgg acacaaaacg gatactgtcg
     2161 atttcatacg cataacccgc cgcaaacccc cctgccgcat aagcataaag cggccgccct
     2221 ttttccacat ccgttacaaa cgcatcgtcc gaatgcagca gccggccgcg caggcacgcc
     2281 tcgtgaaccg catcgttcaa ccatcccgac acctcttcgt cgctccaaaa atacggctcg
     2341 gccttatcat tggcaagcac gcggaaacgc gcaatcaaag ccttcaaatt cattgcgcga
     2401 taccgaactg acgaaccatc cgaaccacgt ccccgcgcaa attctccgcc gatttgcgct
     2461 tatccaaacc ctggccgtaa ttcgccttcg catacagttc aagctcgtcc ttgcccatcc
     2521 ggttgatttg caggatcaca tcctgcaccg cgtcaaacgc cgccgtttcc cgttcgagtt
     2581 ccgaagcgcc cgccttttcc aaagcctccg tatcatccgc cttttccacg cgtttgcccg
     2641 ggacggcggc aaacacatcg ccgtggcgca acaactttgc cgcagccccg gccgacacct
     2701 cgcgcacctg gccgtcttcg aaaaccaagc ccgtatgata gatacggtcg cgccacacgg
     2761 cacgcccgcc gatatacttg ataaaaacct tatccatcca accccccgcc gccgtccgga
     2821 cggcattgtc aaatacagca acgccgcaaa ggcaaatccc cgggcggcgt ttcattccgc
     2881 ttacaactgg ccgaacttct cgccgtaaat caaaatatcg atatcggcgg ccttcttatt
     2941 ttccgcccct ttaagcgtaa ccgtcagcaa agcctgcttg ggcagcgtaa ccagtttggc
     3001 agactggcag cggatacgcc cggcagacgc aaagtccgcg cccgaagcaa aataagccgc
     3061 atcctgaggc actttcgcat catccgcacc gtccgcatac gcaaagccga catcggcagt
     3121 gataccggaa gacatcgccg tcttcacaat aatctgcgcg tcatccaaac ggaaaccctg
     3181 ttccaagaca cccagcgcca acacatcgcc cgccttaggc ggctcagaag catccgcccc
     3241 caagatcgca ccgtcctgct tcgcaacgat acggtaatgc tccgccgcca gattgccgta
     3301 aggcacgccg ccgaaacggt tgccgccatt gtttttcaca taaatctcag ccataaaaaa
     3361 cctcaaccca acaaatagga aaagccgccc tttcaagcgg cattcgaatc agcggatacc
     3421 gccgtgcaaa ggaaccaccg tatccacaac cgtgacaccg tagtcggtaa tttccttcgc
     3481 gcccccgccg acatccacgg caaagcgcgt tttcgccaca ccgcgtatcg taccgacgag
     3541 cgtttccaca cggttgccgt ggtcaagctc cttctcagac caaaagaaag gcataccgcc
     3601 gtgtttgccg gtattcgcaa acgcctccaa caccgcctgg ccgcccaaaa taaccgaacg
     3661 gtcgaccgca aacttgtccg caaacgaagc cgggattttc aagcccgatt ccgcctcgct
     3721 gaacttatcg gcgcaatact tcatctcatc gcccgcatag aaacggatgg ggcgcggcat
     3781 tttcaccagg ataaagccgt tccacaaacc cgcatcgccc aaaaacagcg gattttgatt
     3841 tgcctgggag gcgcgcgcga ttgccgaagc ctgaagctgg cggaatttcg gatcggcggc
     3901 aaaacggttg tactgcgccg gggaaagcag ccacacgcgc aaaggcgaat cacccgccgc
     3961 cttgtcgccc tcaaacttca caatcggcgg cggcagcgga atctggtcga gcacggtacg
     4021 catactgtcc accgtatcca tcgtaaacaa atcggtagag gcaatcttca actcgccgcc
     4081 gttgtcccca acgcccgtta ccgcatcgcc cgaagccgta aaatggcggt ttttggacgg
     4141 ggctttgacc ggattgaccg cataatcatt gaatttcggg tcgcccgcca aaggcacgcc
     4201 ccattcgata ttgtcatgaa aaccgcgcgc gcccgccata tgcaccaaca gcgtctggtc
     4261 ggcataacgg tccatcaggc tttgcgccgc cggacgaatc agcgcgcgat aatcggcagg
     4321 gctgcgctga ttcgtcatcg tgccgccgcc aacggggaaa cgcgcctgat tcacacgcaa
     4381 acccgcctcc gacaggctca tccccacgcc cctgccttcc gccgtgttgt cgcccataat
     4441 cggcagggcg gaaacagggt tgaccaaatt gaaacggatt tcgtcaccca tgccgcgcgt
     4501 caaatcctga cagcgcacga ccggcatatg ctgggtcgtc tgtttgcgca aagtcgcctc
     4561 cgcacccgcg gtaccggcag gcatcttgcc cgccaaacgg ttcagcgtac tgttgcgctg
     4621 catatgcatc gcaaacagcc ccgccgcctg cttcatcatc gcctgcgggt cgccgtaggc
     4681 cgtattcgtc ttttgtgcca taaagagcct ccctcaaaaa ctcaagaatt taaaaacttc
     4741 tcaacctgct cttccgtcat ggaagccagt ttttccgcca gcgcgttgcc gctcaaataa
     4801 tccggcgggc cgtccgaagc cgtatggtcg cgccccgccg gaatatccga cagcgtattg
     4861 ggcgtattct tcccggcagg cggcttttcg gcgggctttt ccggttcggc ggcggatttt
     4921 gccgccttaa acatatcgaa cgccccgatg acctcggcgg cagtcccgtc cttaagcgcg
     4981 tcattaaacg ccttgcggac aagcgggttc tgcccggcca gccactcctc cagctcgcgg
     5041 ctttccacaa tcgaatccgc atcggggtgc gccgtataga tttcgcggta atgcgccttt
     5101 gccgcctcct gccgcttcat gtccgcctca taacccgcca gcttctcctg aatcagcttt
     5161 tccacgccct ttttcacatc ctcgtcggaa aaatccccga acaacgaatt atcggaaccg
     5221 tcagccgttt ccactccggg tttttccgcc cccttctcaa gctcctcgat gcgctccctc
     5281 aaggcttggg cttcggcttt cgccgacttt tccgcctcgc gcgcctctac cagcttttca
     5341 taagggatag tgtgtttgcc gtccttggca cggatgacct tgtccgcacg ccgtccgccg
     5401 caccgatacc cgcgccgacc accgcgcccg tactgccgac caccagcgat tccgcccact
     5461 tcttaccctc caaaccgtct tggatatcgg ggaaaaccaa ctggttcaag cccaaacgcc
     5521 ccgacacgtc cagcggcgtc aggcggctga agcccttggc caacacctcg cccgccttat
     5581 ccccgaaagc atccgccaac atattgcgca acgccgcttc cgcatcccac gggtcatcgt
     5641 cgtcactgcc caacatcgaa gccaccgcaa gcagcgtcga cacaaacggc agccccaaga
     5701 tgcccgaagc catcgcatgc gagaccaaca gccccgccag cgtcttacgc gcctccttat
     5761 cccccttaaa cgcaaggtac gcattgcgcc ccagcgcata caggatattc tgcgaatact
     5821 gcttgaacag aaagaccacc ttcgccgcat tgcccatcat aaagcgcgga cggttttgcg
     5881 ccgcatagtc aaaatgccag tcgtacgtcg cctttttcgc ctgttcgaaa gccgcctcgc
     5941 tgtccgcccc cgcccgtttc gccaaacggt aggccgcgac aaacgtaacc tggcggttaa
     6001 acttctccgc atgatggaac agccaggccg ccttatccat caccttctgc caagccgacc
     6061 ccgccaatcc cgggtctccg ttcgccaccc ccgccaaatc atgcgcctgc gacaaatcga
     6121 tcacaccgta atccgccgcc tttcggaacg ccgccttctc atcctcgttc agactgtcct
     6181 caatcgtatt gaacttctcc ccgaacctca gcccgatctg ttttgaagcc cgcagcaatt
     6241 cccgcgccgc accggcataa ccccacttcg ccgccatcac cggataagcc accattgccg
     6301 tctgcgacag gttcacaacc gcagaagcgg gcgacatccc catcatccac aaaaagccga
     6361 agcccgtcaa agcctgcgcc agcttggaag gattcggatt catcaccgcc tcgtggcgtt
     6421 tcctcatctc atccgccaca cgctgcaact gacgctggtc gaaaccctcc tcatatttgc
     6481 gcccgtccac aaaatcctgc atcacatcca actgttccgc catacggtcc gcatagcgca
     6541 acttcgccag ataattcgca ccgctgccca tattctgcgc atatgcgcgc ctcgcatcat
     6601 cgctgaagcc cggcacgccc ttgcggtgga tgccgtgttt cgcccaagac gtatcgggca
     6661 gggagttcaa ataaagctgc gtcagcgtat cgttcaatcg ggcccgttgc gccggatcca
     6721 aatccatcct gccgacagcc tcgcccagct ccttcataaa tccgctgccg accgcatcgc
     6781 ggcttcggat ataatcccgg gacttcatca cgggcgaaac cttaaacccc gccccgaaat
     6841 cagccttcag cgcatcgcgc agcttctccg cctcgctcaa agtttccgcg cgggacacat
     6901 tcgcactatt cccgtccgca tccttgacca ccaccagata atcgccgaaa cgcgccaaag
     6961 ggaaatacac accgcccagc tcgttgtcaa aacgctcctt caggcggcgc accgtttccg
     7021 catcctgccc cgcacgcgcc aaccgttcgg caagcgcatc gcgcacctgc ccgaaatgcg
     7081 ccctataatc atcccgcgcc ttgcggtaca ccctctgcgc cgcatcaggc agcccggcaa
     7141 aacggcggtt cagcaaagca agcccctcca aagccttttg cgccccaacc tcatcctttt
     7201 ccaaacgctt cacatccgcg cgcgcctgct ccgacatccg taccgcatcc gttttagccc
     7261 ggctttccgc cgccgcatcc gccccggcgc gcctcaacgc ccgcttcgcc tccgaatccg
     7321 cataaaacag acggcgcagg cgcatatccg cctcatccgc caaaatttcc cgaccgtgtt
     7381 tttcctgcgc cttctccagc gcataagccg ccttatccgc cgcccgttgc gctttccgta
     7441 ccgcggcatc cgcacgcgca atacgcgcac cggcggaagc aacggccgcc tccgccttcg
     7501 cgattttacc gtccgcaata tccaaagccg tccggatgcc gtccaaacgc ccccgggcat
     7561 cctttcgcat cagcgggtcg gcatccacct tcgccagcgt cgcatcgtgc atcagatccg
     7621 caagcgcttt cgcatcctcc tccttcaacc tgccccattc cctgacaacc ttgtccgcct
     7681 ccgtaaccgc cttgttcgca tccgcgccga agagttccga caaacgcccg tattccttca
     7741 ggccgtccaa aacgccgccg taaatgtcct cgatctgccg cctgcccaaa aactggagct
     7801 gaatcccctt ggaagcatcc cagcggtctt tcagcgcgtt tctcaaatcg gattttttac
     7861 ccgttatatg accgattgcg gccccgatgt tcgccgcacg ggaaaaacgc accgcctccg
     7921 tgtcaaaatc ggcaatgccg cccttgcccg catctttgtc ttgcaaaatc tgcaacaggc
     7981 gtttatcatc aatgcccgat aaaggcgatt tgctttcaga ggctcccgta gttgatacgc
     8041 ggtcaagtaa tgaaagcaag ttgccttttt ctattttcgt cagcttatgg tcgtaatagc
     8101 ggttaccgtt cctgctaacc gcgacggcag cccttaccgt gtaatccgca ccgccgacat
     8161 tcagtcccga aacataatat tcataaccct gaatatcgcc gttcttagcc aaatcctcgt
     8221 tcggcagcgt atcgatatac accgcattct caataatctg cggaattgcc gcgatactct
     8281 gcaaatgttc cgcgtcctta tagtcgtgac gcaatatttc agtgatgccc gaacgtccca
     8341 aactgatttc acgccccgtg tccttattca cataaggccc gcgcaaagat ttgccgtatt
     8401 ccagcgcatt gcgcttatat tcgcgcaaat tgccgccttc cggaacctcc ctgcccgaga
     8461 tacggatggt ttccgcacgg cgcagcttct caaggctttc cgacttggaa cgttccgccg
     8521 caccgtcttc ggcccgcgcg aacatcactg cacgatgatt gccgccccaa ggcgcatccc
     8581 gcgccccttc cacattcccg tgcaaatccg ccagcatcgc aaacacatcc gcgtccgaca
     8641 tcgcaccgcc ggccttgccc gccaggcgtt gcagcacacg gcgcaacagg gcgccgatac
     8701 gcgccaacac gcccgcaatg ccgcgtttca aaccgttgcc gaccttcacg ccgtaacggt
     8761 tttcaatgcc cgcccaaccg ccggtacgct gcgccgcata aagctccgcg accgcctctt
     8821 ccaccgcggc ggggcgcacc gaggccgccg catcgcccgt gccttcgcgc ccttcctgca
     8881 ccgcgtccgc aatgcgccgt atcaggccgt tgccgtccgc acgttccaat tcttcacggt
     8941 acttggcgaa accatccgcc gcaaagcccc tgtgccccag ctcgtgccac gccgcccata
     9001 ccgcacgttc gggcgtaagg ttttccgcca ccagcgtgat tttgcccgtc ctgccgtcaa
     9061 accagccctc cacacgctgc gacaacagca tctgcgcctt gtccggcgcc gtttcggaca
     9121 cggcggcgac atccacccgt tccgccagtc cgcctatgct ttcggcaagg cgttttttga
     9181 tattttcggc gtgctcgcgc aatgccttaa aaccttgcgg cgcctgacgc cctttcacgg
     9241 tataaacagg ccctccctgc aacacacgcg ccttgcgccg tgcctcttcc ggattgtcca
     9301 aagccgtttt cgcaaacgtt tcaggttcgg cagccttatc cgaagacggc ttttcggttg
     9361 ccgcgccttg tgcggcggcc gacttgccct ttccgccatc gaagtgggat tttcccgctt
     9421 cgatatttcg caccttatcc gaagacggct tttcagttgc cgcatttttt gcagcagccg
     9481 ccttgcccgc aacaggcgcg tcttttgccc gggcaggctg cgccctgccc gccggtttcc
     9541 cggcagaagc ggcatcgcgc ggccgcgcca tcaccttggc cggcgccctt gcttcctgcg
     9601 tcggacgata atcccgaccc ggctcggacg gcacggcttc cgacaaaccg cccgcccgca
     9661 aggtttccgc ctcccgcccc ttcaaataac ggcggccgtc ggagacaagg ccgtcagagt
     9721 tggaaggacc ggccatatcg gcaaactcct ccggcatccc gcctttgccc ggcctgcccg
     9781 gcacacccgc aagcgcatca atatgcctgc ggtccgtatg ctcgaaacgg tattcgccgc
     9841 cccccaaagg cacacccgcc ttttccggcc tgcgcctgtc cgccgccaaa cggcgcgtga
     9901 aatccgccgc cgcatccgcc atccgtttct taggcgatac cctgcccgcc gattccgcaa
     9961 cctgcggatt caataccggc aacaccgtat cggggcgttt gcccgcaaca ggcgcacgtt
    10021 tcccgccgtc cgtcccggca aggttttcag acgcggacag gccgggcgcg gcaccttccg
    10081 cgcgcgcccg aacctgtaag ttttgccgac gggccggcgc attgccggac gcaacggcgg
    10141 accctggcaa accctgcaag gcagccgcat ttgcatccgc ccccgcatca ggggtcaaac
    10201 ccctgccgcc ttgggtcaaa ccctgccgca catcctgccg cacatcctgc gccaaaccct
    10261 tatcttccgt gggtaaagcc cgggtcaaac ccctgccgcc gccgacaacg gcctcagacg
    10321 cgccgtcatc cggcaacgcc gtccgaaccc cctgcaaacg ctccccctcg cggctcaaca
    10381 gcggcacgct ccaaccgttg ttgcggcggt aaccgtaaac cgcacggtta agcctgtcca
    10441 acacatccgc cgattccgga tgttgcgcac ggtaagcgcg tacagccccg gccgattccg
    10501 ccaaaccctc aggataatgt ccgcgcatat ccgccatacc cgcctcccgg cgcataatcc
    10561 cgtccgccgt atagtccgcc accgtctgcg catgacggcg cacccattca ggcagcgcgt
    10621 caaaccgcct gcgcgattcc ttatccaacg catcggcagg gacggaaaac ccttttttag
    10681 gaacaggcac ggcatccgcc atacgcacgg gcggcggcag gtaaccctgt ttggcttcgg
    10741 aagccgcctg ataatccgcc tcaatccgcg cgtgatacgc ctgctcgatt tttcggcgca
    10801 caggcgcggc gatttgcccg aaatccgcaa cgcccttaat atcaaggccc gcctccttcg
    10861 ccaaagcctt gcgcccccgg gtatccaagc cgtcgaaata ttggcccgca ggcagcggcg
    10921 agacccgcgc aatcccgccc gaagcggcgg cggcagaacc gcccggcgca accgaagccg
    10981 caccgcgcgg cgcaccgccg gggcgcacat tgccgtaagc ggacggaaca ccgcccctgt
    11041 ccgcatccgc cgaccgtccg gacggcacat catccgcaac cgaccgggct tccatatcgt
    11101 cagacaccgc agacggcaca gccgcgcccg aatccgccgc caaagcagcg gccgcagaaa
    11161 ccgcaccgtc atccggatta atccccatcg cctccgacgg cttggcccgg tattcggccg
    11221 ccatgtccgc atactgacgc gccaaaccgt ccggcatcac gcccgtatcc aaaaattccg
    11281 ccccgtcctc cgacgggata cccgaaacat ccggctgttt ttccgtcccg cgcgccaatt
    11341 cctccgcgcg gggcgtattg ccgtcggcag ggccgctgaa aaaccgcccc gcctcctcct
    11401 gcttcgtacg gtccgcaaac tgccgcaaag ccggatgcga ctgatcgtga tgcgccgtat
    11461 caaaacccgc gccgccctgt tccgcgccgc cgtccgccgc cgcacgcaac gcctgcgccc
    11521 cttccggggc cggcctgccc gccttcctgt tgcccccgat acccccctcc gcacccgcct
    11581 tccgtccggc cggcggcctg agcgggtcag ttaccgccgc ataagccttc gttccggcaa
    11641 accccaccgc agaatgcccc aaagaagaga aagcctccaa agccgccccc ttctcgtccc
    11701 attccccgtt tgccagcccc gtacccaaat actcgcccgc aaactcaccg gccgattccg
    11761 tcgcataagc cgccgcgtgc cgtgccgcac cgcccaaacc gcccttggca gactccttcg
    11821 ccagcgccgc aaattcaggc gttcccttag ccgccgcaac cgccgccgca acacccattt
    11881 tctccaacgc ggctttcccg gcggcctttt tgcccatatt caaaatactg ccgccaagtt
    11941 tcatcgccgc catatccgcc gcgccgacca ccgcgccctt gaccgccgca tttttcaacg
    12001 cacccggcgc accgcggccg ataaacgcca tcaccgcatc cttgtccgca gggtcgacgc
    12061 ccgccgcctc tgccgccctg tccagctgcc cgccgtattc catcagcgta ttgcccaagg
    12121 tcgcgcccgc ataggcgccg acagccgcgt taccgcccgc caaagcgccc aatatgccgc
    12181 cggcggttgt cgtagcaata ggaacaagcg cattgggcgc ctgctccagc accgcacccg
    12241 ccatctcgcc cacatcttcc aaggcgccgt ccaaaccctt ctcgcgccag tccttcttaa
    12301 gctcccccca cacattcgac aggccgccgc cgacaccccc gcccttttcc caagcctcgc
    12361 ccagctccct gcgcgcttgg gatttgcgcc cctcctgaat cttccgataa tccatatcct
    12421 cggccttgag ccggcccagt tcctctttgt cgcccgtaag ggcattccac cccatacgcg
    12481 ccgaacgcat agaattttta aacccgcgcg tcaacgccgt atcgtcggcg gccgcccgcg
    12541 catccttttg cgtaaagccg cggtactcct tcaaaccccc gacaagccgc ccgtgttcca
    12601 acggatcgta tctgaccaaa tcactcattg ctcaaccctc ttctcaccct tctcattctc
    12661 ataaatgatt ttaccgccgg ccgttttctg accgttcggc ttaaagccca acgccgcata
    12721 acgcttctcg cgctctcccg caaactccac atccaaaggc ttgcccgtcc gcaaatcgac
    12781 aatcccctcg cgcttcgccg tcaagcccgt atccgggtcg gcaacctcat aactgattgt
    12841 cttgaacaca ttcgggtcaa agcccttctc cccttgccgc tcaaacttcc cgttaagcgc
    12901 atcaatctgc cgcgcaatct ccccgcgctg cccgtccgac ttcgcaaaac cataagcccg
    12961 cgtcaaatcg gcgatgcgct tcctatcctc aagctccagc gcatccgcct cacgcttcat
    13021 ctcaaacccc tgccgcttca tccccagctc ggcctgctgc acatcaaacg ccctgtccgc
    13081 attcctctgc gccatctcgc ggttcaacgc accctcgttc gccttaaccg ccgcatcaaa
    13141 ccgccccttc tgcaacaccg cctcacggtt cgccgcattc tccgccgcag ccgccgccag
    13201 cctttccctg cccaattccc tgaccgccgc atttttatta tgttccgcca caatcccgcg
    13261 cgccgcatta agctgcgccg ccgtcaactg accgttcaaa gcccccgcat aaggcgtagt
    13321 cgccctcctg taaagctccc gctcctcagg cgacagcgca tccggcccgg cagacaccaa
    13381 aggacgctgc gcgtcaaaat cacgcaccgg tttgccgtcc cgatacacat tcccgtcaaa
    13441 tcccaaaggc ggcggcgtcc gtccgcccgc atccgtcggg cgcgtatcgc gccgcgcgaa
    13501 atccgccccg gcccgcgcat cgggggaaag cgccttatcg ccgcccgaaa accccaaacc
    13561 ggcatccgca ccccgttcga aagcacccgc ccggcgcaac cgccgcgccc catcctcaat
    13621 attgttacgg ctcaaatcca tcacattccg ataacgcgcc ggcccggcct cataattcgc
    13681 aacggtacgc cgcaccgcat cggcacggtg cgcctgtgcc gccgcccgct cccgctcctc
    13741 cgcccccttc cgggccttct cttttttctc cttttccttc atctcccaaa aatccccggc
    13801 agacggctca aacaaaccca tcgcaaaccc tccgaacaaa taaagcccaa aataagcaaa
    13861 aacccaaacc caatcaaacg cctaaagtta agaacaaaca aaaatcgcaa ccacaaacca
    13921 attaataaac aacaagttac acaaaaaaac acaccgacgg gccatttccg ggggcaaata
    13981 aaaaccgcct tcgtgcaagg cggttgcaaa aaagcctttc atttaacgaa aggctttttg
    14041 ccgcccgcgt accgcgttca gaggttgtcc gacaccgtcg gcgtttccat gcctgtttgg
    14101 gcgtgattcg cactctttgg cggcacggcc gtcatcgggc cggtatccgc gccgtaggct
    14161 tcagggatgc cttcgggcgg tatttgcgtt tcaggcggca tggcggggac ggggaagccg
    14221 ggatcgtcgc cccgcgccgg cctgacatat cccgcgccct gcatgaccgc gtcggcaacg
    14281 ggggcgattt gcggcatggc ggctatctgc ccgcccgcct gcatggccgc ataagccgcc
    14341 tgcacgccga tttgtaccgc ccgcgcttcg atttccttga tttcgctcgc ggtacgttgt
    14401 tccttgagcg ccaattcccg ccgtttgatg tcgttgccgg attttgccaa tgcgtcctgc
    14461 accgcctgcg cgatacgcgc ctcgatttgt tcgggcgttt cctgcactcg gacttctttg
    14521 attttttcaa tcactttgtc tttaaacggg atgtccatca gggacaccat aaacggcagc
    14581 accgccgcct gatattcggg cggcagggat ttgaccgcct cgctcatcgc acccagctgc
    14641 tggctgcggt aggagttggt gctgggcacg tcttccaaag ccactttcag ccgtatgttt
    14701 tgcaggtcgt tggacaaata agccttgccg gttacggggt cggtttcagg cctgttgatg
    14761 acgaccgtcc gcccttgcgt gacggcgtcc ccttctatga cgacggtttg ctcgtccgag
    14821 cccaaatcct cgataatcat cgcaagcagc aactcgccga ccaatgagcg gctctggcgg
    14881 aagttgtcca taaccagccc cagcgactgg ttggactgct cgacttggat gctttcctgc
    14941 ctgccgctgg tggcgttgcc ccggttgccc ataaatgacg gggtaatccc gctgatttgc
    15001 cgtattgtcg cgcggctgtc ttgaagcatc tgccaatgct gtgccgacaa ttcgaaatcg
    15061 cggctgacgt cgaaacgcgc gcccggctgg gcggcctcta ttttgttcag cacgatgtcc
    15121 gcgtccaccc gtgcgatatt gcggcggaac tgttcgtccg acatatcgac tatgcctttg
    15181 gtgcgtaccg tgcgtattgc cgacaaaccc catcgtaatt tgctgttggt gctgttgagg
    15241 ttgtcctgcg cgtatttcat attgcggaca tatccgtagg ggatgccggt gttgtcctcg
    15301 cggaatccga aaaacgggac gtaagggaac ttttgatgcg gatacggggt cggctcgtcg
    15361 cggacgacca aatcccccac gacaaaggcg cggcgcatac gcgggacgga agcggcaaac
    15421 aatagcgcgc cgtttgccgc catctcccga tggtttggat ttgcgccgtc aaactccacc
    15481 gtgcgccctg tttttttgtc gcgcaggcag tctgccgtta cccaccgcct gtaccatact
    15541 tccgccaccg ccagttcgcg cgtggtttca ttgaaccaaa actcttcgct gacggtgttg
    15601 cgccccgaaa taccccaagc gtccgccagt ccggtattgc cgccgccgtc aagcatttcc
    15661 ccgctgatgc gccaatccga accgccgcgc cccatcgctt tgaaatgtcc ggcatattca
    15721 gggaagaatt gcgccaggcg ttcaggcagc agccagcggc ggcgtatcag ccagcgggca
    15781 tcggacaggt cgtatttgta agacttcata tcccaatgga tggcgttgcg gtggatgacg
    15841 ccgcactcat aaggaaactc gaaagggttg gggttgcgtg taacctccac ccagccgatg
    15901 ccgcaggcta tctgccccct gaacgcgtcc gaacaagcct tgtcggcacg gctttgccgt
    15961 tccgcgcggt tgagtttgaa gttcaatgcg tccgccacgt cccgcccgcc ggtttcgccg
    16021 tccgccgtca cgcgccagtc cgtccgtatc gtcgcctcat atccctgtac cgacagcagg
    16081 gtcggggtaa tgaggttttc aacggcgggc ggcaggccca actcgcgctg tttctgtaaa
    16141 agctcgttgt caagctgcct gccgtcggcg tagtccattt ccttgtcggc aacggcacgc
    16201 catgcaggtt ggttcatcat ttcaccgaca aacagccggt attccccgat agtcagcggt
    16261 tcgccgtttt tatcgggcaa tacgcctgtt tccggtacgt ccgtccccat caataaagcc
    16321 tccaatccga tacgggcgtt tccgtgtatc ccgtattgct gcctgtatcc attaaatcaa
    16381 ccgcctgcgc caggtagcgg aacatatccg cgccgtgcga atattcgtcg tgcagcggcc
    16441 ccattgccac gcctgttttc gcatgtattt ggcggccgta ccgtttcagg cattccaaaa
    16501 gccgcgctgt tttgtcttta tcgaagtaca ctttgggaaa cagcatccgc gccgccctga
    16561 tgccttcttc gataccggcg gcgttttgca cgaaaaccga cttgcgcccc agtccggtca
    16621 aaatctccat cgtacttttg cctgtttgga agttgcgcgt cctgccgtcg tgcggcagga
    16681 agtccgtccc ccaccggtag ggcagctttt ccaattcggc aacataccag tccaacgtcc
    16741 ggtgcgtgtc ttcgatgtag cctatgatgc gcacgctcgt caaatcgcgc tgcaccagcc
    16801 cgatggtcat ggcatcgttc cagcccaaat cccaaaccgt atgcacgggc aaagaagaat
    16861 cataagggac gagcgtaacg cgtccggaat gaaaagcgtc ctgtatttca tgccggtaaa
    16921 ccgccccctc cgataccatg cgcggcctgc cttcccaaat attcccgtag tcctctttat
    16981 tcatcgaacg ctgtgctttg agccgctccc ggttcaatgc ttcgggaaac cacggattgt
    17041 cgcgccagtt gatttcgcaa agccaagtgt cttcggacgg catagcgata aaacgccggt
    17101 aggtttcgtc cgtctccata tcgggattga gggtaatcca aatttccgaa ccttctttgc
    17161 gtatggtcgg cgtgagcacg tcccagcttt ttttactgac gccgtgccct tcctcaaccc
    17221 atacgatgtc gataccttca aacgatttga tgctgtccac ggtatgcgac tgcaggcccg
    17281 aaaatacaaa cagcgtgccg tttgcgcctc gtatctcgaa gtcggttatt tcgtagaaat
    17341 gccccaaacc caactgcgcc actttgtctt tcaacaggcg gtgtacggaa tcgcgcatcg
    17401 atttttgaat ttcgcgcgcg cataaaatac gcaaagggcg ttgcgccccc agcgccagca
    17461 gtgcggatgc cgcgccgtgc gatttgccgc cgccgcgccc gccgtacata accttgtacc
    17521 ggcaaggctt gaacagcccg tccagttttg cgggcaattt caaatcaacc gtctttcccg
    17581 tcatcttcag gccctacaaa ttcgatacgg atgcccgccg tcttggcgga ttccgaaatc
    17641 ttcgattcgg cggtatccat accgtatgat ttacgctcga tttccaccaa aaccttaaac
    17701 cccgccgcca ccgtttggaa catacgcgcc tttgtgaatg tgtcctccgg gcttccgtac
    17761 aattccgcga caatctgctc cgcgcttttg gacaggtttt ccgccaaatt ccgatgcctg
    17821 cgctgtacgg cggcaacccg tttcgcttcc gcgtccgtta cttatttaag gttgaaatcc
    17881 gcataatccg gcgcattgcc gtttttgtcc gcggacagca ccatcgcccg cgcctttgcc
    17941 tgtacctcgt cattcaaatc gcgcgtccac acgcgttctt tggcaaccct gccgacgtgt
    18001 tgcgccgaaa cattgtattt gcgcccgatt tcggcaatgc tcaaaacccc gcgccggtaa
    18061 tccagctcga ctttgcgcca atcctcatct gacaatctcg gcattaaaaa tccaacctcc
    18121 cgtttttggc ggaacattcc agataattcc gcaacactga aaactcgcgc cccatctgaa
    18181 tactggaaaa ctgctgtccg aaccccgaca tcaaagcccc caacgagcgc atttcctgcg
    18241 ggttgaggtg caataccgta tcgcctattt ccaatacgcc catccccgaa tccaataccg
    18301 atacgctgac ggggcgcgtc tcgccaaacc ctatggcggg cttgaaaatc ccccttgtca
    18361 cgcggtagat tttgccgtgc tcgaccagca gcttggtaaa tttagtgatt tccgacattt
    18421 tcaggccggt cgtttccgcc aaagcctcgc ggctgaccac ctgctccgcg ttgtgcaaat
    18481 ccacaacccc ctggtacacc ttgtcaatat ccgacaatcc cgacatcaaa tcaaactcct
    18541 aaacatccca aacgattcca aactctaccg ccgcccgcga ttgcaggcgg ttacactaca
    18601 aagccaaaat ctttagatgc tgcctctctc gctttcactg catcttcaat atgttcaaat
    18661 aaacctaata ttttattttt tctattaacc ataatcctag cttgccattt cttagacggc
    18721 t
//
LOCUS       DAWXHA010000033        18617 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.033, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000033 DAWXHA010000000
VERSION     DAWXHA010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18617
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.033"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            153..1217
                     /locus_tag="AABD07_000852"
     CDS             153..1217
                     /locus_tag="AABD07_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HFB2355422.1"
                     /translation="MKAARFYNKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIRVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDKLVSEG
                     FERLIHNNESAVKIIVNPNL"
     gene            1358..1681
                     /locus_tag="AABD07_000853"
     CDS             1358..1681
                     /locus_tag="AABD07_000853"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HFB2355423.1"
                     /translation="MGDSVLSAIQQTIIQRKSADPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKDPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELSRRQGLSGLAEKA
                     ARTES"
     gene            1755..2078
                     /locus_tag="AABD07_000854"
     CDS             1755..2078
                     /locus_tag="AABD07_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HFB2355424.1"
                     /translation="MDNCIFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2125..2328
                     /gene="tatA"
                     /locus_tag="AABD07_000855"
     CDS             2125..2328
                     /gene="tatA"
                     /locus_tag="AABD07_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HFB2355425.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2332..3018
                     /gene="tatB"
                     /locus_tag="AABD07_000856"
     CDS             2332..3018
                     /gene="tatB"
                     /locus_tag="AABD07_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HFB2355426.1"
                     /translation="MFDFGLGELIFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQELDTQIELEELRKVKQAFEAAAAQVRDSLKETDTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPLPDTANTVSDGISDVMPSERSDTSAETLGDDRQTGSTAEPAE
                     TDKDRAWREYLTASAAAPVVQAVEVSYIDTAVETPVPHTTSLRKQAINRKRDFRPKHR
                     AKPKLRVRKS"
     gene            3031..3801
                     /gene="tatC"
                     /locus_tag="AABD07_000857"
     CDS             3031..3801
                     /gene="tatC"
                     /locus_tag="AABD07_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HFB2355427.1"
                     /translation="MSETQNEQTVQLLVEHLIELRRRLMWMVVGILVCFFGMMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLVSLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLAGVTPVGVNMATDIDKYLS
                     FILGMFVAFGTAFEVPIVVILLTKIGAVTTEQLKHARPYVIVGAFVVAAVITPPDIIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPAKT"
     gene            3845..4453
                     /locus_tag="AABD07_000858"
     CDS             3845..4453
                     /locus_tag="AABD07_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFB2355428.1"
                     /translation="MNTLYLGSGSPRRMEILTQLGYRVVKLPAGIDETVKAGETPAPY
                     VQRMAEEKNQAALTLFCETNGAMPDFPLITADTCVFSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMEKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRPPLSALKP"
     gene            4462..4815
                     /locus_tag="AABD07_000859"
     CDS             4462..4815
                     /locus_tag="AABD07_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HFB2355429.1"
                     /translation="MNRQTAYFLASFSLIALIALSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFNAYPAEKICAALSAVFSIIFFIS
                     CLSFVKQYKETNNVR"
     gene            4805..6733
                     /locus_tag="AABD07_000860"
     CDS             4805..6733
                     /locus_tag="AABD07_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymerase"
                     /protein_id="HFB2355430.1"
                     /translation="MSAETTVSGARPAAKLPIYILPCFLWIGIIPFTFALRLKPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPAISFLLFAMAAFWWLQARLMNLIYPGMNDI
                     ASWVFILLAVSAWACKSLVAHYGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWENTPL
                     LQNIIVHRGQGVIGHIGQRNNLGHYLMWGILASAYLNGQRKIPAALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNAILETF
                     TGIRYETAVERVANGGFTDLPRQSEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     TIHDNFLSTLFTHSHNIILQLLAEMGISGTLLVAATLLTGIAGLLKRSLTPASLFLLC
                     ALAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNSFSPAADDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKALKYRPYSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPETKPCKRPASADADTARNVKLHARHC
                     KKQQTGREIRYQKTLQPC"
     gene            6809..7486
                     /locus_tag="AABD07_000861"
     CDS             6809..7486
                     /locus_tag="AABD07_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HFB2355431.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7499..8905
                     /locus_tag="AABD07_000862"
     CDS             7499..8905
                     /locus_tag="AABD07_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HFB2355432.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFKTRGDNGAREILTEWKNSPVSSAVYVIQGDEKKDILNRYIDNYTIE
                     RARLFAANNPHSNLVRIEYDRFGEEYLFFIKGWDNHQAQRLPSPLFIPGLPLAPIWHE
                     FIILSFIIIVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMAEKLEKLVAKERYLLHHVSHEMRSPLARMQTIVGLIQAQPQKREQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVAL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGFKTEKSAN"
     gene            9023..11446
                     /locus_tag="AABD07_000863"
                     /pseudo
     CDS             9023..11446
                     /locus_tag="AABD07_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273083.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
     gene            11491..11736
                     /gene="rpsP"
                     /locus_tag="AABD07_000864"
     CDS             11491..11736
                     /gene="rpsP"
                     /locus_tag="AABD07_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HFB2355433.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAV"
     gene            11752..12261
                     /gene="rimM"
                     /locus_tag="AABD07_000865"
     CDS             11752..12261
                     /gene="rimM"
                     /locus_tag="AABD07_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HFB2355434.1"
                     /translation="MTDAQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLA
                     KDGKTVSVTLEAGKVVNGELQVKFEGIDDRDSAFSLRGYTIEIPREAFAPTEEDEYYW
                     ADLVGMTVVNKDDTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKT
                     ITADWGLDY"
     gene            12261..13010
                     /gene="trmD"
                     /locus_tag="AABD07_000866"
     CDS             12261..13010
                     /gene="trmD"
                     /locus_tag="AABD07_000866"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HFB2355435.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQTAKVIYLSPQGKPLTHQKAAKL
                     AELTHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGIL
                     GDIQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLNKILQEQREIQS"
     gene            13025..13390
                     /gene="rplS"
                     /locus_tag="AABD07_000867"
     CDS             13025..13390
                     /gene="rplS"
                     /locus_tag="AABD07_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HFB2355436.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13681..14436
                     /locus_tag="AABD07_000868"
     CDS             13681..14436
                     /locus_tag="AABD07_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HFB2355437.1"
                     /translation="MGCLPLGGIGMSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVF
                     GPNGAGKSTFLKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAM
                     GLWYEIGFFKGINTAQKQRVHEALERVGMRQFARRQIAHLSNGQFQRVLFARMLVQNA
                     KFLLLDEPFNAVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREK
                     IAAGATETILTESYLAQASAKMQQQESPDWCAS"
     gene            14471..15346
                     /locus_tag="AABD07_000869"
     CDS             14471..15346
                     /locus_tag="AABD07_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HFB2355438.1"
                     /translation="MNLYDLLLAPFAEFDFMHYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGVGGFAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVILISKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSGLTLITLAVIY
                     RPLVLESIDPLFLKSVNGKGGLWHVVFLILVVMNLVSGFQALGILMSVGLMMLPAITA
                     RLWARNMGTLILLSVLIALFCGLIGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILPKWFKNHRHHTT"
     gene            15423..16337
                     /locus_tag="AABD07_000870"
     CDS             15423..16337
                     /locus_tag="AABD07_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter solute-binding protein"
                     /protein_id="HFB2355439.1"
                     /translation="MKHLKLTLIAALLATAATAAPLPVVTSFSILGDVAKQIGGERVA
                     VQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADIQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEYDPHVWNDPVLMSDYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGNRYNISFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNVKALTNAMKQ"
     gene            16557..17423
                     /locus_tag="AABD07_000871"
     CDS             16557..17423
                     /locus_tag="AABD07_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HFB2355440.1"
                     /translation="MKNILLVFVSFVPLCVRTDLPLNIEDIMTDKGKWKLETSLTYLN
                     SENSRAALASPVYIQTGSASFIPVPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGSG
                     SYLWHEERKLDGNGKTRNKRMSDISAGISHTFLKDGKNPALIAFLESTVYEKSRNKAS
                     SGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDDVKYKAGNYWMLNPNISFAAND
                     RISLTGGIQWLGKQPDRIDGKKESARNTSTYAHFGAGFGFTKTAALNASARFNVSGQS
                     SSELKLGVQHTF"
     gene            17466..18005
                     /locus_tag="AABD07_000872"
     CDS             17466..18005
                     /locus_tag="AABD07_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355441.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAGGLGAIPGDV
                     GAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQGI
                     GRHRPWESKSTDRSWKNRF"
     gene            17987..18352
                     /locus_tag="AABD07_000873"
     CDS             17987..18352
                     /locus_tag="AABD07_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355442.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMPSDDLFLKCLQSSYKAYSETEPA
                     GLDKRQLMKTLIQKCGFSC"
BASE COUNT         4913 a         5744 c         4112 g         3848 t
ORIGIN      
        1 gagggaaggg aattttgcaa aggtctcagt ttgtagtaaa atatctaaac agattcaatc
       61 ggaaacggtc aggcttcttc acgccattcc catttcaacc gccgcctgct agattcagac
      121 ggcattccta cttgaaaaca aggagcgtta caatgaaagc agcacgtttt tacaacaaag
      181 gcgacatccg catcgaagac atccccgaac cgaccgtcgc ccccggcacc gtcggcatca
      241 atgtcgcctg gtgcggcatc tgcggtaccg acctgcacga atttatggaa ggcccgattt
      301 tcatcccgcc ctgcggtcat ccgcatccga tttccggcga gtccgcgccc gtaacgatgg
      361 gacacgagtt ctccggcgtg gtttatgccg tcggcgaagg cgtggacgac attaaagtcg
      421 gccaacacgt cgtggtcgaa ccctacatca tccgcgacga cgtaccgacc ggcgaaggca
      481 gcaactacca cctctccaaa gacatgaact ttatcggctt gggcggctgc ggcggcggcc
      541 tgtccgaaaa aatcgccgtc aaacgccgtt gggtgcatcc gatttccgac aaaatcccgt
      601 tggatcaagc tgctttgatt gaacctctgt ctgtcggaca ccacgcctat gtacgcagcg
      661 gcgcgaaagc aggcgatgtc gcattggtcg gcggcgcagg cccgatcggt ttgctgttgg
      721 ccgccgtgtt gaaagccaaa ggcatcagag tcatcattac cgagttgagt aaagcacgca
      781 aagacaaagc ccgcgaatcc ggcgttgccg actacatcct cgacccgtcc gaagtcgatg
      841 ttgttgaaga agtgaaaaaa ctgaccaacg gcgaaggcgt ggacgtggcg ttcgaatgta
      901 ccagcgtgaa caaagtgttg gatactttgg tcgaagcctg caaacccgcc gccaacttgg
      961 ttatcgtatc catctggagc caccccgcca ccgtcaacgt ccacagcgtc gtgatgaaag
     1021 aactggatgt gcgcggcacg attgcctact gcaacgacca cgcggaaacc atcaaactgg
     1081 tcgaagaagg caaaatcaac ctcgaaccct tcattaccca gcgcatcaag ctggacaaac
     1141 tggtttccga aggcttcgag cgtctgatcc acaacaacga atccgccgtt aaaattattg
     1201 tgaatccaaa cctgtaagca aattacattt gcaacagcac aaatgccgtc tgaaacgctc
     1261 agacggcatt ttccaacgaa acgcaacagg cgtattgccc gagggcagcc gtttagccta
     1321 tcattccgaa caaacagaaa caaacagaag gaaaatcatg ggagattccg tactatccgc
     1381 catccaacaa accattatac agcgcaaatc tgccgacccg tccgaatctt acgtcgcaca
     1441 gctcctgcac aagggcgagg acaaaatcct aaaaaaagtg attgaagaag cgggcgaagt
     1501 gttgatggca tccaaagaca aagacccgtc ccacctggtt tacgaagttg ccgacttatg
     1561 gttccacacc atgattcttc tgacacacca cgacctgaag gcggaagacg tattggacga
     1621 actttcccgc cgtcaggggc tgtcggggct ggccgaaaaa gccgcccgta cagaatcctg
     1681 aatttatatt acaatctcat cccttccacg tttaatccgt ctgcgtgctt ttttcagacg
     1741 gcaacggagc cgttatggac aactgtattt tctgcaaaat cgccgccaaa gagattccgg
     1801 cgcaaaccgt ctatgaagac ggcgaaatgg tttgtttcaa agacatcaac cccgccgctc
     1861 cgcttcatct gctgctgatt cccaaagtcc attttgattc gttggcacac gccgcgcccg
     1921 aacatcagcc ccttttggga aaaatgatgc tgaaagttcc cgaaatcgcc aaagcttcgg
     1981 gactgaccga cggtttcaaa acccttatca ataccggcaa aggcggcgga caagaggtct
     2041 tccacctgca tatacacatc atgggcacac ccgtataaac cgttatttca caatcaaccc
     2101 ctaatactta cttaaggata catcatgggc agtttttctc tgacgcactg gattatcgta
     2161 ctgattatcg tcgttttgat attcggcacc aaaaaactgc gcaacgtcgg caaagacctc
     2221 ggcggtgcgg ttcatgactt caaacagggg ctgaacgaag gcacagacgg caaagaagcc
     2281 caaaaagacg atgtaatcga acacaaaaaa gacgaagaca aagcataact tatgtttgat
     2341 ttcggtttgg gcgagctgat ttttgtcggc attatcgccc tgattgtcct tggtccagaa
     2401 cgcctgcccg aagccgcccg cactgccgga cggcttatcg gcaggctgca acgctttgta
     2461 ggaagcgtca aacaagaact tgacactcaa atcgaactgg aagagctgag gaaggtcaag
     2521 caggcattcg aagctgccgc cgctcaggtt cgagacagcc tcaaagaaac cgatacggat
     2581 atgcagaaca gtctgcacga catttccgac ggtctgaagc cttgggaaaa actgcccgaa
     2641 cagcgcacgc ctgccgattt cggtgtcgat gaaaacggca atccccttcc cgatacggca
     2701 aacaccgtat cagacggcat ttccgacgtt atgccgtctg aacgttccga tacttccgcc
     2761 gaaacccttg gggacgacag gcaaaccggc agtacagccg aacctgcgga aaccgacaaa
     2821 gaccgcgcat ggcgggaata cctgactgct tctgccgccg cacctgtcgt acaggccgtc
     2881 gaagtcagct atatcgatac tgctgttgaa acgcctgttc cgcacaccac ttccctgcgc
     2941 aaacaggcaa taaaccgcaa acgcgatttt cgtccgaaac accgcgccaa accgaaattg
     3001 cgcgtccgta aatcataaag ggggcatccg gtgtccgaaa cacaaaacga acaaaccgtc
     3061 caactgcttg tcgaacacct catcgagctg cgccgccgcc tgatgtggat ggttgtcggc
     3121 attctcgtct gctttttcgg catgatgccg tttgcccagc agctctatac ttttatcgcc
     3181 gacccgctga tggcaaacct gcccaaagac accagtatga ttgcgaccga tgtcatcgca
     3241 ccgtttttcg ttccggtcaa agttaccctg atggcggcgt ttttggtttc actgccgcat
     3301 acgctctacc aaatctgggc attcgtcgcc cccgcactct accaaaacga aaaacgcctg
     3361 attacgccgc tcgtcctctc cagcgtcagc ctgtttttca tcggcatggc atttgcctat
     3421 ttcctggttt tccccgtcat tttcaaattc cttgccggcg taacccccgt cggggtcaat
     3481 atggcgaccg acatagacaa atacctgtcc tttatcttag gtatgttcgt tgcgttcggc
     3541 acggcatttg aagtgcccat cgtcgtcatc ctgttaacca aaatcggcgc agtcacgacc
     3601 gagcagctca aacacgcccg gccttatgtc attgtcggcg cgtttgtcgt tgccgcagtc
     3661 atcacgccgc ccgacattat ttctcagacc ctgcttgcca ttccgctgat cctcttatac
     3721 gaggcgggca tttggttcgg acgcttcttc actccacgtt cagaacagga tggcgacata
     3781 cagccgcctg caaaaacctg acactatgcc gtctgaagcc ccgccgcaca ttaaggagca
     3841 caccgtgaac accctttact taggttcggg cagcccgcgc cggatggaaa tcctgacaca
     3901 gttgggctat cgggtcgtca agctgcccgc cggcatcgac gaaaccgtta aagccggcga
     3961 aacgcccgcc ccttacgtcc aaaggatggc ggaagaaaaa aatcaggcgg ctttgaccct
     4021 cttttgcgaa accaacggcg caatgcccga tttccccctg attaccgccg acacctgcgt
     4081 cttttcagac ggcatcatat tgggcaaacc tcgctcccaa gccgaagcaa tcgaattttt
     4141 aaaccgattg tccggcaaac aacataccgt cctgactgct gtctgcattc attatcgcgg
     4201 caaaacgtca agccgcgtcc aaaccaaccg cgtcgttttc aagcccctga gttcggaaga
     4261 aatttccgcc tatgtgcaaa gcggcgaacc gatggagaaa gccggtgcct acgccgtgca
     4321 aggcataggc ggtatcttta tccaatctat cgaaggcagc ttcagcggca ttatggggct
     4381 gcccgtttat gaaaccgttt ccatgttgca ggatttggga taccgccccc ccttatccgc
     4441 ccttaaaccg taaagtccgc cgtgaacaga caaaccgctt acttccttgc ctccttcagc
     4501 ctgattgcac tgattgccct atccctttct tgggaattat ggattgcacc gttacgcccg
     4561 ggcggttcgt ggctcgcgct caaagccctg cccctctgcc tgccgctttc aggtattcta
     4621 aagaaaaaaa tctataccta ccaatacagc tccatgctgg ttctgattta ctttgccgaa
     4681 gccgtcatgc gcctgttcaa cgcctatccc gcagaaaaaa tttgcgccgc gctttccgca
     4741 gtattcagca tcatcttctt catatcctgc ctgtcgttcg tcaaacaata caaggaaaca
     4801 aacaatgtcc gctgaaacga ccgtatccgg cgcgcgcccc gccgccaaac tgccgattta
     4861 catcctgccc tgcttccttt ggataggcat catccccttt accttcgcac tcaggctgaa
     4921 accgtcgccc gacttttacc acgatgccgc cgccgcggcc ggcctgattg tcctgttgtt
     4981 cctcacggca ggaaaaaagc tgtttgatgt caaaatcccc gccatcagct tcctcctgtt
     5041 tgcaatggcg gcattttggt ggcttcaggc acgcctgatg aacctgattt atcccggaat
     5101 gaacgacatc gcctcttggg ttttcatctt gctcgccgtc agcgcgtggg cctgcaagag
     5161 tttggtcgca cactacggac aagaacgcat cgttaccctg tttgcctggt cgctgcttat
     5221 cggctccctg cttcaatcct gcatcgtcgt catccagttt gccggctggg aaaacacccc
     5281 cctgcttcaa aacatcatcg ttcacagagg gcaaggcgta atcggacaca tcgggcagcg
     5341 caacaacctc ggacactacc tcatgtgggg catactcgcc tccgcctacc tcaacggaca
     5401 acgaaaaatc cccgcagccc tcggcgcaat ctgcctgatt atgcagaccg ccgttttagg
     5461 tttggtcaat tcgcgcacca tcttgaccta catagccgcc atcgccctca tccttccctt
     5521 ctggtatttc cgttcggaca aatccaacag acggacgatg ctcggcatag ccgcagccgt
     5581 attccttacc gcgctgttcc aattttccat gaacgccatt ctggaaacct ttacaggcat
     5641 ccgctacgaa actgccgtcg aacgcgtcgc caacggcggt ttcacagact tgccgcgcca
     5701 aagcgaatgg aataaagccc ttgccgcctt ccagtccgcc ccgatattcg ggcacggctg
     5761 gaacagtttt gcccaacaaa ccttcctgat caatgccgaa cagcacacca tacacgacaa
     5821 cttcctcagc accttgttca cccattccca caacatcatc ctccaactcc ttgcagaaat
     5881 ggggatcagc ggcacgcttc tggttgccgc aaccctgctg acgggcattg ccgggctgct
     5941 gaaacgctcc ctgacccccg catcactttt cctgctgtgc gcgcttgccg tcagtatgtg
     6001 ccacagtatg ctcgaatatc ctttgtggta tgtctatttc ctcatcccct tcggactgat
     6061 gctctttctg tcccccgcag aggcttcaga cggcatcgcc ttcaaaaaag ccgccaatct
     6121 cggcatactg accgcctccg ccgccatatt cgcaggattg ctgcacttgg actggacata
     6181 cacccggctg gttaactcct tttcccccgc cgctgacgac agtgccaaaa ccctcaaccg
     6241 gaaaatcaac gaactgcgct atatttccgc aaacagcccg atgctgtcct tttatgccga
     6301 cttctccctc gtaaacttcg ccctgccgga ataccccgaa acccagactt gggcggaaga
     6361 agcaaccctc aaagcactaa aataccgccc ctactccgcc acctaccgca tcgccctcta
     6421 cttgatgcgg caaggcaaag ttgcagaagc aaaacaatgg atgcgggcaa cacagtccta
     6481 ttacccctac ctgatgcccc gatacgccga cgaaatccgc aaactgcccg tatgggcacc
     6541 gctgctgccc gaactgctca aagactgcaa agccttcgcc gccgctcccg gccatccgga
     6601 aacaaaaccc tgcaaacgac ccgcgtcggc ggatgcggat accgcccgaa atgtaaagct
     6661 ccatgcaaga cattgcaaaa aacagcaaac cggtagggaa atacgctatc aaaaaacatt
     6721 gcagccgtgt taagataaac tgtcaaacaa tcttttcacg ccacgcccga aacagggtcg
     6781 gggcataccc ttacgaaaag gaaacaccat gagccgcgta ttactcgtag atgacgatgc
     6841 cctgctgacc gaactgctga ccgaatacct gagcgccgaa ggtctgaacg tccgcagcgt
     6901 tcccgacggg gaagcaggcg tacaggaaat cctgagcggg caatacgatg tagtcgtatt
     6961 ggattccatg atgcccaaaa tgaacggctt ggatgtcttg aaaaacgtac gcgcccgaag
     7021 caccgtcccc atcatcatgc tgaccgccaa aggcgacgac atcgaccgaa tcatcggctt
     7081 ggaaatgggt gcggacgact atgtccccaa accctgcaca ccacgcgaac tcttggcacg
     7141 catcaatgcc atcctccgcc gagcacaaca cagcggcgaa cagaacaacg cacccaacag
     7201 catctccgtc agcgatgtcg tcctataccc cgccaaacgc caggcatccg tcaaagacat
     7261 gccgctcgaa ctgaccagca ccgaattcaa cctgctcgaa gtcctgatgc gccatgccgg
     7321 acaggtagtc agcaaagaaa ccctgtccgt cgaagcactc gaccgcaaac tggcaaaatt
     7381 cgaccgcagt atcgacgtac acatctccag catccgccac aagctgggcg atgcctccct
     7441 gattcaaacc gtacgcggct tgggctacct gtttgtcaaa aactgaagca gcgggcaaat
     7501 gaaactgttc caacgcattt tcgccacatt ttgcgcggtt atcgtctgcg caatctttgt
     7561 ggcgagtttt tctttttggc tggtgcagaa cacccttgcc gaaaaccaat tcaaccaacg
     7621 ccgcaccatc gaaaccacat tgatgggcag cattatttcc gcattcaaga cacggggcga
     7681 caacggcgcg cgcgaaatcc tgaccgaatg gaaaaacagc cccgtctcat ccgccgttta
     7741 cgtcatacag ggcgacgaga aaaaagacat cttaaaccgc tatatcgaca attacaccat
     7801 agaacgcgcc cggctgtttg ccgccaacaa cccccattcc aaccttgtcc gcatcgaata
     7861 cgaccgtttc ggcgaagaat acctgttctt cattaaaggc tgggacaacc accaggcaca
     7921 acgcctgccc agcccgctgt ttatcccggg cctgccgctt gccccgattt ggcacgaatt
     7981 catcatcctc tccttcatca tcattgtcgg actgctgatg gcatatatcc ttgccggcaa
     8041 cattgccaaa cccatcagaa tcttaggcaa cggcatggac agggtggcaa acggagaact
     8101 tgaaacccgc atctcccaac aggtcgacga ccgcgacgac gaattgtccc atcttgccat
     8161 ccaattcgac aaaatggcgg aaaaactcga aaaacttgtc gccaaagaac gttacctact
     8221 ccaccacgtt tcccacgaaa tgcgctcccc gcttgcccgt atgcagacaa ttgtcggact
     8281 gattcaggca cagccccaaa aacgggagca atatctcaaa cggctggaag gcgaactgac
     8341 ccgcatggat acgctggccg gggaactgtt aaccctgtcc cgcctcgaaa cctccaatat
     8401 ggctttggaa aaagaaagcc tgaaactcct gcccttcctg ggcaacctgg tagaagacaa
     8461 ccaaagtatc gcccaaaaga acggacagac ggtcgccctg tctgccgacg gaaaaatccc
     8521 cgaaaacaca accatccttg ccaacgaaag ctacctgtac cgcgccttcg acaacgtcat
     8581 ccgcaacgcc gtcaactaca gccccgaagg cagcaccatc ctgatcaaca tcggacaaga
     8641 ccacaaacac tggataatcg acgttaccga caacggcccc ggcgtggacg aaatgcagct
     8701 cccgcacatc ttcaccgctt tctaccgtgc agactccagc gccaacaaac ccggaacagg
     8761 actggggctt gcattgaccc aacatattat tgaacagcac tgcggcaaaa tcatcgccga
     8821 aaacatcaaa ccgaacggtc tgcggatgcg ctttatcctg cccaagaaaa aaaccggttt
     8881 caaaacagaa aaaagtgcga actgaccata atgccgtctg aacccgcttc agacggcatt
     8941 gcacaaacag ttaccccaaa acaaacacac agcgggtgca tctccaaaaa tcacgcacat
     9001 accgtccgca aaggaatata tcatgccggc acaaaccgat ccgggctact tcttcatgcc
     9061 caaccacatt atcctgatag gcgcgagcga acaaccgtac agcctgggtg aacgcgtact
     9121 cagcaacctg ctgagtacgc cctttcaagg aaaaatcacc cccgtaaacc cgcgccacca
     9181 caccatagcc gggcttcccg cctacaccag cctcaacaaa atccccggca gtgcagacct
     9241 gattattgcc gttaccccgc ccgacagtta cgacaccctc ctcaaaacct gccgtaaaaa
     9301 gcagctccga cacatcatcc tcatacagga ctgggacagc ctgtctgccg cagaactgca
     9361 caccgccgaa actgccatcc gcaaacacca cggcaacgga ctcaacatca ccgcctgcac
     9421 caccgcaggc atccaactgc cctcactcgg actcaacatc agtacccaag acggatatgc
     9481 cgcaggccat accgccatac tgaccggcaa tgccgccgtc agccgccaaa tcgacaacat
     9541 cctgaacaaa ctccgtcaag gcacatcccg ccacatcagc ctgcatcccg gcatcagccc
     9601 catcacatcc gccgattggc tcaaccgctt cggacacagc ctgcacacca aaaccgccgt
     9661 cctacaccac aaccctgaag aggatcagcg caggctgttc agcgcaatcc gccaatttac
     9721 ccgccatacg ccgctgattc tccacatcac ctgcctcacg acagaaaccg accgtgccgt
     9781 actgcactgc ctcgcccgac actgcaactt cctcatcagt ttcaacgccg acgacctcga
     9841 agccgcactg agcgcccaac tgtccgacct tccacccctg tcccgactcg acatcctgtc
     9901 cgacacgcct gccgaatggc tgcacgcgca cgcaccaaaa aacctcaccc tccactttcc
     9961 caaccttccc caccacatcc gcaacggaca cctgaccggc acacccacac cctcaatctg
    10021 ccacgacatc gcctcacgtc agcttgcccg ccccgacacc caagccgtcc tgaccatcct
    10081 cggtccctcc ggacacgagg attacaaaaa aacagcacgc gcccttatcc gcctgtccga
    10141 acagaccgcc aaacccctgc tcgtcagcag ccccttttca gacggcataa cacatttcga
    10201 cacccccgca caggcaatcc gcaccctttc ctaccgtaac accgccgccg ccctgaaaca
    10261 ggcacagctc gacattgcac cgccgcagcc atgccgtctg aaaacaccgc aaccccaaaa
    10321 catcaaaaaa gcccttgcag cggcaaatcc cgccctgctc gccgaagccc tgcacctccc
    10381 cctaccggca caccacccat aacgccgtcc aattccaatt cggcagccac cccctctatg
    10441 gcgacatcct gaccgcacgc tgcaacggac aaaccactgc cgtactcccg ccgtttacca
    10501 cgctcgacag ccgccacctt gcccgctttg ccgaactcga cggcacacaa accctcgacc
    10561 agttcctgca cacactgacc gtcattcccg aataccgcca acacattttc ggcatcaccc
    10621 tcaacctcaa cggcggacaa tacagcagcg atttcatctt aaagacaccc ggaacacacg
    10681 acacgcccaa acgcaagaac acaggcaaag ccgcccaaac cctcgaacat gccgccgcaa
    10741 aaatgcagag tgccgccgca tacctggaac acaaaaaccc gacagccgcc gaatttctcc
    10801 gccacacaag cgaagccgcc gcagaactgc tcggcagcaa aaccgaaacc ggagcagccg
    10861 tacccaacgt acttgccccc tatcccgcag cacaccccaa aacactgtcc ctaaaaaaca
    10921 acacgaccgt taccattatc ccccttttac ccgaagacgc agaagccaaa cagcagttcg
    10981 tccgcagcct cggccccgaa gcacggtaca cacgcttcat gacccacacc aacgaactgc
    11041 ccgcagccac gttggcacgc ctgtgcaacc ccgattacca ctgtgaaccg catggacggc
    11101 aagggatgcc gacagcaaca tcgtcgccgt cgtccgccac agccgcctga accgcaacga
    11161 atgcgaattt ggcatcacac tggcggaaca tatgcgcggc agcgggctgg cacagaaaat
    11221 gatggaactc atcatccaaa ccgccgcaca gcaaggctac ctgagcatga gtgccgacat
    11281 tctcaaaacc aataccccca tgatcaaact tgctgaaaaa tcaggattta ccctcaagga
    11341 atcggacacc gaaaaaaacc tgtaccgcgc atatctgaac cttgcggcag acaaaacaac
    11401 aggaaaaaca aataaaaact tgcgcaccgg ccacaaaata acctaaaatc ggcagtttcc
    11461 atatatccga ttttctcaaa aggactcaaa atggtagtta tccgtttggc acgcggcggc
    11521 tcgaaacacc gccccttcta caacgtcatc gttactgact cacgcagccg ccgcgacggc
    11581 cgcttcatcg aacgcgtagg cttctacaac cccgtagcca acgaaaaaca agagcgcgtc
    11641 cgcctcaatg cagaccgcct gaaccactgg attgcacaag gcgcgcaagt cagcgactcc
    11701 gttgcaaaac tgattaaaga acaaaaagcc gtctaatccg cgtttgccgc catgacagac
    11761 gctcaaaacc gggtagccat gggctacatc aaaggcgtat tcggcataaa aggctggctg
    11821 aaaattgccg ccaacaccga atattccgac agccttttgg actaccccga gtggcatttg
    11881 gccaaggacg gcaaaaccgt cagcgttacc cttgaagccg gaaaagtcgt caacggcgaa
    11941 ctccaagtca aattcgaagg catagacgac cgcgattcag cattctcatt gcgcggttac
    12001 accatcgaaa taccccgtga agcattcgcc ccgacagaag aagacgaata ctactgggca
    12061 gacttggtcg gcatgaccgt cgtcaacaaa gacgataccg ttttaggcaa ggtaagcaac
    12121 ctgatggaaa ccggcgcaaa cgacgtattg atgattgacg gagaacacgg gcagattctg
    12181 attccgttcg tttcccaata tatcgaaacc gtcgataccg gcagcaagac cattactgcc
    12241 gactggggtt tggactactg atgcttatcc aggcagttac cattttcccc gaaatgttcg
    12301 acagcattac ccgctacggc gtaacgggac gcgcgaacag acagggaatc tggcagtttg
    12361 aagcagtcaa tccccgaaag tttgccgaca acagattggg ctatatcgac gaccgcccgt
    12421 tcggcggcgg tccgggaatg attatgatgg ctccgccgct tcatgcggcg atagaacacg
    12481 ccaaagcaca atcttcccaa accgcaaaag tcatctacct cagcccccaa ggaaaaccgc
    12541 tgacacacca aaaagcggca aaactggcag aacttacgca tctgattctg ctgtgcggac
    12601 gctatgaggg aatagacgaa agactgctgc aaagcagcgt cgatgaagaa atcagcatcg
    12661 gagacttcgt cgtttccggc ggagagcttc ccgccatgat gctgatggat gcggtattga
    12721 ggctcgtacc cggcatattg ggcgacattc agtctgccga acaggattcg ttctcaagcg
    12781 gtattttgga ctgcccccac tacaccaaac ccttagaatt tcaaggcatg gctgttccgg
    12841 aagtattgcg ctccggaaat catggcttga tagcggaatg gcggttggaa caatcgctgc
    12901 gccgcacctt ggagcgcaga cccgatcttt tggaaaagcg cgttttaatc ccaaaggaat
    12961 cccgcctctt gaataaaatc ctacaagagc aacgggaaat ccaatcataa tttaggaaaa
    13021 aacaatgaac ctgattcaac agctcgagca agaagaaatt gcccgcctga acaaagaaat
    13081 ccccgaattc gcaccgggcg acaccgtagt cgtatccgta cgcgtcgtgg aaggtacccg
    13141 cagccgtctg caagcctacg aaggcgtggt tatcgcccgt cgcaaccgtg gtttgaacag
    13201 caacttcatc gtccgcaaaa tctccagcgg cgaaggtgtt gaacgtactt tccaactgta
    13261 ttcccctact gttgagaaaa tcgaagtcaa acgccgtggc gacgtacgcc gtgccaaact
    13321 gtactacctg cgcggtctga ccggcaaagc tgcacgcatc aaagaaaaac tgcctgcacg
    13381 caaaggttga ttcaaaccgt tttcccccaa tgccgtctga acgttcagac ggcatttttt
    13441 attgccgcga tgccggcaag gcaacgatat gcctgaccct catccacctt aattaacaat
    13501 cactcccgcc tattcaagca gaatttacag actaaacgtt atacagtatc atatccgcca
    13561 tataacgata accgctttgc caacttccct ttcaaaactg caaatcatta tgacaccttc
    13621 cctcttactg tcaggattga ccttccgact cttcctcgcc ctgattgccg tattcctttt
    13681 atggggtgtt tacctttggg cggtatcggt atgagcatca tcgttgaaaa cctgacggtc
    13741 agctaccgcc gccgccccgc cgtacaccac gtcgacatta cttttgaaga acatagtatg
    13801 tgggcggttt tcggtcccaa cggcgcagga aaatctacct ttctcaaatc cttaatggga
    13861 ttgcagccta tcgatacggg cagcatccgg ctggacggat tgacccgtca aaacattgcc
    13921 tatctccccc aacaatccga catcgaccgt tcccagccta tgaccgtttt cgacttggcg
    13981 gcaatggggc tgtggtatga aatcggtttt ttcaaaggga taaataccgc tcaaaaacaa
    14041 cgcgttcacg aagccttgga gcgtgtcggt atgcggcagt ttgcccgccg ccaaatcgcc
    14101 cacctctcaa acggacaatt ccaacgcgtc cttttcgccc ggatgctggt tcaaaatgca
    14161 aaattcctgc ttttggacga acctttcaat gctgttgatg cacggacaac ctacgagctt
    14221 ctcgacgtgt tgcaaaaatg ccattgcggc ggacacgcta tcattgccgt tttgcacgat
    14281 tacgaacaag tccgtgccta ctttcccaat accctgctgc tcgcccgcga aaaaattgcg
    14341 gcaggcgcaa ccgagaccat tctgacagaa tcctacctcg cccaagccag cgccaaaatg
    14401 cagcaacagg aaagccccga ctggtgcgcc tcataaatac tgcccgaaac cacgccccac
    14461 accagacacc atgaacctct acgacctgct ccttgccccc tttgcagaat tcgacttcat
    14521 gcactacgcc ctcgcatccg tcttctgcct gtccctcagc gccgcacccg tcggcgtatt
    14581 cctcgtcatg cgccgtatga gcctgatagg cgacgcattg agccacgccg tcctgcccgg
    14641 tgccgccgtc ggctacatgt ttgccggctt gagcctgccc gctatgggtg tgggcgggtt
    14701 tgccgccggt atgctgatgg cgctgcttgc cggactcgtc agccgcttta ccaccctgaa
    14761 agaagatgcc aactttgccg ccttttacct gagcagcctc gccatcggcg taatcctcat
    14821 cagcaaaaac ggcagcagcg tcgatttact ccacctcctt ttcggatctg tgcttgccgt
    14881 cgatattccc gcactgcaac tcatcgccgc cgtctccggc ctcacgctca ttacccttgc
    14941 cgtcatctac cgccccctgg tgctagaaag catagacccc ctgttcctca agtccgtcaa
    15001 cggcaaaggc gggctttggc acgtcgtttt cctcatcctc gtcgttatga acctcgtatc
    15061 cggcttccaa gctctcggca tcctgatgtc ggtcggactt atgatgctgc ccgccattac
    15121 cgcccgctta tgggcaagaa atatggggac gctcattctg ttgtccgtcc tcatcgccct
    15181 tttttgcggt ttgatcgggc tgctcatttc ctaccacatc gaaatccctt ccggccccgc
    15241 catcatcctc tgttgcagcg tcctttatct cttttccgtc atactcggca aagaaggcgg
    15301 catcttgccc aaatggttca aaaaccaccg ccaccacacc acctgacccc gcaagccgct
    15361 tgaacaaaca ggcggcttgt tttaccataa tgaatgttat gttatatcac aggaaaacag
    15421 ttatgaaaca cctcaaactt acccttattg ccgcattgct ggccaccgcc gcaactgccg
    15481 caccccttcc ggttgtaacc agtttcagca ttttaggcga cgtagccaaa caaatcggcg
    15541 gtgagcgcgt agccgtacaa agcctcgtcg gagccaacca agatactcat gcctatcaca
    15601 tgaccagtgg cgacattaaa aaaatccgca gtgcaaaact cgtcctgctc aacggcttgg
    15661 gacttgaagc cgccgacatc caacgcgccg tcaaacagag caaagtatcc tatgccgaag
    15721 cgaccaaagg catccaaccc ctcaaagccg aagaagaagg cggacaccat cacgaccacg
    15781 atcatgacca cgaaggacac caccacgacc acggcgaata tgacccccac gtctggaacg
    15841 accctgttct tatgtccgac tatgcccaaa acgtcgctga agccctgata aaggccgatc
    15901 ccgaaggcaa agtttattat caacaacgct tgggcaacta ccaaatgcag cttaaaaaac
    15961 tgcacagcga cgcacaagcc gcatttaatg ccgtccctgc cgccaaacgc aaagtcctga
    16021 ccgggcacga cgcattttcc tacatgggca accgctacaa catcagcttc atcgccccgc
    16081 aaggcgtgag cagcgaagcc gagccgtccg ccaaacaagt cgccgccatc atccggcaaa
    16141 tcaaacgcga aggcatcaaa gccgtattta ccgaaaatat caaagacacc cgcatggttg
    16201 accgcatcgc caaagaaacc ggcgtcaacg tcagcggcaa actgtattcc gacgcactcg
    16261 gcaacgcgcc cgcagacacc tacatcggca tgtaccgcca caacgtcaaa gccttgacca
    16321 acgcgatgaa gcaataaaac cgtttgattg gtttgaattt gaaaaggcaa aaggccgtct
    16381 gaaaattaaa tacgaggttt tcagacggcc ttctcttgtg caataaagca gtaaacaaat
    16441 attgataaga aaaaaacaat cagtattgaa aatatcgtta aaaatattat ttagacagat
    16501 tacatggaat ttcattaaca tcagtagact ttgatttcaa tcaagaaaac aatgtcatga
    16561 aaaatattct cttagtattt gttagctttg tgccattatg tgtccgcact gatctgccgc
    16621 tgaatatcga agacataatg accgacaagg gaaaatggaa actggaaact tcccttacct
    16681 acctgaacag cgaaaacagc cgcgccgcac ttgcctcacc ggtttacatt cagaccggct
    16741 ccgcttcctt tatccccgtc ccgaccgaaa ttcaggaaaa cggcagcaat accgatatgc
    16801 tcgccggcac gctcggtttg cgctacggac tgaccggcaa taccgacatt tacggcagcg
    16861 gcagctatct gtggcacgaa gaacgcaaac tcgacggcaa cggcaaaacc cgcaacaaac
    16921 ggatgtccga catatccgcc ggcatcagcc acaccttcct taaagacggc aaaaatcccg
    16981 cactcatcgc tttcctcgaa agcacggttt acgaaaaatc gcgcaacaaa gcctcgtcgg
    17041 gaaaatcgtg gctcatcggc gccaccacct acaaagccat agatccgatt gtcctttccc
    17101 tcaccgccgc ctaccgcatc aacggcagca aaaccctttc agacgacgtc aaatacaaag
    17161 caggcaatta ctggatgctg aatcccaaca tctcatttgc cgccaacgac agaatcagcc
    17221 tgaccggagg catccaatgg ctgggcaaac agcccgaccg catagacggc aaaaaagaat
    17281 ccgcaagaaa cacatccacc tacgcccatt tcggcgcagg tttcggtttc accaaaaccg
    17341 cggctttaaa cgcatccgca cgtttcaacg tttcagggca aagcagttcc gaactgaaat
    17401 tgggcgtaca gcatacattt taagcagatt ttgattttcc aaccttgtaa tccaaaggag
    17461 ttattatgaa aaaacaaatc accgcagccg taatgatgct gtctatgatc gcccccgcaa
    17521 tggcaaacgg attggacaat caggcatttg aagaccaagt gttccacacg cgggcagatg
    17581 cgccgatgca gttggcggag ctttctcaga aggagatgaa ggagactgaa ggggcttttc
    17641 ttccattggc tatcttgggt ggtgctgcca ttggtatgtg gacacagcat ggttttagtt
    17701 atgcaacgac aggcagacca gcttctgtta gagatgttgc tggcggatta ggcgcaattc
    17761 ctggtgatgt aggtgctgca ggaaaggttg tttcctttgc taaatatgga cgtgagatta
    17821 aaatcggcaa taatatgcgg atagcccctt tcggtaatag aacaggtcat cctattggaa
    17881 aatttcccca ttatcatcgt cgagttacgg ataatacggg caagactttg cctggacagg
    17941 gaattggtcg tcatcgccct tgggaatcaa aatctacgga cagatcatgg aaaaaccgct
    18001 tctaactcct cctttttttc tatttgaaga tgtgtctttg gatatatttc aaggattgtc
    18061 ggaattggaa aagaaaatag agccgcagga tttgatggat gatgtttacc gtgcttttga
    18121 ttcggttgga aatattctga atttccgtat agtagaaaaa gagcaaaaag ggttttgggt
    18181 aagtaccaaa atcaaaacag ttgtatttga ttcggcagat atgccttctg atgatctttt
    18241 tctgaaatgc ttacagtctt catataaggc ttattctgaa actgaacctg ccggtttaga
    18301 taaacggcag ctgatgaaaa cgttaattca aaaatgcgga ttcagttgtt gacgaaaaaa
    18361 tggattctga actaacagaa actgatttcg accatgtatg aggtaaaaaa tgtctttcgg
    18421 ctatttgatt gcaacatcgc aaccttgcga attgttgaca aaatctcgag gtgaaacttt
    18481 ttctttaatt atggataaga tggatttatg gatttatttc agattttgtg aaggaaatat
    18541 ttatacaata aggaagaatg aaactgaatc ttgccttaca gaaagaggag gtgaatggtt
    18601 gaaacatatt tatgaat
//
LOCUS       DAWXHA010000034        18554 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.034, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000034 DAWXHA010000000
VERSION     DAWXHA010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18554
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.034"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(77..2701)
                     /gene="alaS"
                     /locus_tag="AABD07_000874"
     CDS             complement(77..2701)
                     /gene="alaS"
                     /locus_tag="AABD07_000874"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HFB2355443.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGKEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVQEMGGAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALAKGGKTLGGEI
                     IFKLYDTYGFPYDLTADICRERNIEPDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGGQVVELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFAGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAV
                     NAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALRETVTDLTGKSDNA
                     VILLAAVNEGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAD
                     KLPEMLASAEGWLCQKLS"
     gene            2890..4035
                     /locus_tag="AABD07_000875"
     CDS             2890..4035
                     /locus_tag="AABD07_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2355444.1"
                     /translation="MQGMIMVKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLK
                     IYNWSEYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGR
                     QIKAGAYQKIDKSMIPNYKHLNPEMMRLMDGVDPDHEYAVPFYWGTNTFAINTERVKK
                     ALGTDKLPDNQWDLVFNPEYTFKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDI
                     REATALLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIR
                     VMMPKEGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARD
                     LMEDEFKNDNTIFPSGEDLKNSFIMVPIRPAALKFMVRQWQDVKAGK"
     gene            complement(4076..4978)
                     /locus_tag="AABD07_000876"
     CDS             complement(4076..4978)
                     /locus_tag="AABD07_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFB2355445.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTVMNVLIKEASAKFALGSGELVF
                     WRMLFSTVTLGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLTTGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQEPAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSATGVAMSSVWATLTGWHTLSFPSAVYLSGI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPIAFKQRLQALFRQR"
     gene            5117..5614
                     /locus_tag="AABD07_000877"
     CDS             5117..5614
                     /locus_tag="AABD07_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFB2355446.1"
                     /translation="MAGMKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAP
                     AKGFRLAPSHWADVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDS
                     MYEIYLRSAVDSQRGEINTEQSKLYIENALRGWQQRWKNMDAKPDNPAFTNFLMEVMK
                     MQPLK"
     gene            complement(5676..6581)
                     /gene="mtrA"
                     /locus_tag="AABD07_000878"
     CDS             complement(5676..6581)
                     /gene="mtrA"
                     /locus_tag="AABD07_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HFB2355447.1"
                     /translation="MDILDKLVDLAQLTGSADVQCLLGGQWSVRHETLQCEGLVHIVT
                     AGSGYLCIDGETSPRPVGTGDIVFFPRGLGHVLSHDGKYGESLQPDIRQNGTFMVKQC
                     GNGLDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESEKPLTGTVS
                     VVNALPSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNIDKM
                     VAAANMSRAQLMRRFKSQVGLSPHAFVNHIRLQKGALLLKKTPDSVLEVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            6710..7045
                     /locus_tag="AABD07_000879"
     CDS             6710..7045
                     /locus_tag="AABD07_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFB2355448.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            7224..7646
                     /locus_tag="AABD07_000880"
     CDS             7224..7646
                     /locus_tag="AABD07_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355449.1"
                     /translation="MSAVFIAPYLTAFHEQEKIFEYADLTVTAPNRSGRAIKLEADGR
                     QYRLSCYGFDSLCTGGNIGRAIRARQVKIVLSETVGKGFLNGVLLEYRNSGSVYSNKD
                     FSRTEDRLVEVLAQPAVFSLKPGILLLLPAIFLRLKKM"
     gene            7752..8315
                     /gene="pgsA"
                     /locus_tag="AABD07_000881"
     CDS             7752..8315
                     /gene="pgsA"
                     /locus_tag="AABD07_000881"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HFB2355450.1"
                     /translation="MPWNIPIFLTWLRVLLIPVLIVLFYLPFSWFSEEAVNVAAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRSSVAVAAVGKFKTAAQMLAIFFLLLNFPDFYGFNLVVIG
                     NILMFIASLLTVWSMLYYLKMAWKEIA"
     gene            8396..8471
                     /locus_tag="AABD07_000882"
     tRNA            8396..8471
                     /locus_tag="AABD07_000882"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8429..8431,aa:Gly,seq:gcc)
     gene            8497..8570
                     /locus_tag="AABD07_000883"
     tRNA            8497..8570
                     /locus_tag="AABD07_000883"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8529..8531,aa:Cys,seq:gca)
     gene            8671..8760
                     /locus_tag="AABD07_000884"
     tRNA            8671..8760
                     /locus_tag="AABD07_000884"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8705..8707,aa:Leu,seq:taa)
     gene            8864..9916
                     /gene="sohB"
                     /locus_tag="AABD07_000885"
     CDS             8864..9916
                     /gene="sohB"
                     /locus_tag="AABD07_000885"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HFB2355451.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFETFFLSEEETKHQEKKEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPGLDIEKI
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKRSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(9967..10821)
                     /locus_tag="AABD07_000886"
     CDS             complement(9967..10821)
                     /locus_tag="AABD07_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355452.1"
                     /translation="MWKMLKHIAKTHRKRLIGTFSPVGLENLLMLGYPVFGGWAINAV
                     IAGRVWQALLYALVVFLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAV
                     TARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLP
                     RFAAISENLYFRLNNSLERDNHFDERQLYRHYGLVSRLRVLISNREAFGYLCVGAAMG
                     ILFGFAFVMMTLKGYGSAGHIYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRIEWS
                     ERNIKAGT"
     gene            complement(10832..11263)
                     /locus_tag="AABD07_000887"
     CDS             complement(10832..11263)
                     /locus_tag="AABD07_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HFB2355453.1"
                     /translation="MNRLDQLGIRINLICNVFDKWIGQQDLNYNLFTVLYTLATEGSR
                     TQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRERLLSLTEKGKVHAAPLTE
                     NAQEFSDKVFSTFGDKRTTRLFADLDALAEVMEKTISENKK"
     gene            complement(11498..12368)
                     /locus_tag="AABD07_000888"
                     /pseudo
     CDS             complement(11498..12368)
                     /locus_tag="AABD07_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
     gene            complement(12444..13355)
                     /gene="hisB"
                     /locus_tag="AABD07_000889"
     CDS             complement(12444..13355)
                     /gene="hisB"
                     /locus_tag="AABD07_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HFB2355454.1"
                     /translation="MTKTQLHLNNFLTLAQEAGSLPKLAKLCGYRTPVALYKLKQRLE
                     KQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETRIAETA
                     SAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDIS
                     CKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGR
                     PGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF
                     GRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            complement(13372..14451)
                     /locus_tag="AABD07_000890"
     CDS             complement(13372..14451)
                     /locus_tag="AABD07_000890"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HFB2355455.1"
                     /translation="MKSVRSFIRNDILAMSAYKITDVPPGFAKLDAMESPAHPFEGHE
                     ALMREWRAQLASAPIHLYPNPSGCGLQEALRSAFDIPDCAAVALGNGSDELIQFITML
                     TAKPGAAMLAAEPGFIMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAAIEASDGIVVVDEAYGAFNGDSFLPQAGRIPNLIVLRTL
                     SKIGFAGLRIGYATGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNAFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITIGSSAQNDAVLDVIRRLYR"
     gene            complement(14497..15786)
                     /gene="hisD"
                     /locus_tag="AABD07_000891"
     CDS             complement(14497..15786)
                     /gene="hisD"
                     /locus_tag="AABD07_000891"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HFB2355456.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRS
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAIAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILVKDLNEACEISNYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            complement(15783..16670)
                     /locus_tag="AABD07_000892"
     CDS             complement(15783..16670)
                     /locus_tag="AABD07_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HFB2355457.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLSEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMTEETKNGRKQTRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGGKAYIRPKTE
                     QETLQTIPSPKITKENPKS"
     gene            complement(16762..17427)
                     /locus_tag="AABD07_000893"
     CDS             complement(16762..17427)
                     /locus_tag="AABD07_000893"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HFB2355458.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIAPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSYLVVNKAALKTKYALLEPIIQSFGGAVKAKW
                     AFI"
     gene            complement(17506..18159)
                     /locus_tag="AABD07_000894"
     CDS             complement(17506..18159)
                     /locus_tag="AABD07_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HFB2355459.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASAPAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIK
                     QQYRVVSAKINQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            18435..18519
                     /locus_tag="AABD07_000895"
     tRNA            18435..18519
                     /locus_tag="AABD07_000895"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18469..18471,aa:Leu,seq:caa)
BASE COUNT         4166 a         4541 c         5188 g         4659 t
ORIGIN      
        1 tgttttagta ttcattctaa caatccaaaa tataagccat ttgaacaaga ctcaaatggc
       61 ttattaagat ttaaatttaa cttaatttct gacaaagcca accttccgcg cttgccagca
      121 tttcgggcaa tttgtcggca tccgtaccgc cggcttgcgc caagtcggga cggccgccgc
      181 ctttgccgcc gacttgttcg gctgcaaatt taaccagatc tcctgctttg acttttccgg
      241 tcagggcttt ggatacgccg gcgcacaggg agactttacc ctcgtttact gccgctaaaa
      301 gaatcacggc gttgtcggat tttccggtca ggtcggttac ggtttcgcgc agggcggctg
      361 cgtcggcttc gatttgtgcg gcaacgagtt tggccgcgcc caggtctttt gcgtcgtcca
      421 agagtttggc gcctgcgtgg acggcgagtt cggctttggc gcgtgccaat tctttttcca
      481 atgctttggc gtgtgccgcg cctgcttgga ttttcgccag tacgtctttt tcggtttggg
      541 ctttggtttc ggcaatgatg tcttttacca aacgctcttg ctcttgcgcc catttgagtg
      601 cgttcaggcc ggtgatggct tcgatacggc gtacgcctgc ggcaataccg ccttcgctga
      661 tgattttgaa gaggccgatg tcgccggtgc gtgaaacgtg tgtgccgccg cacaattcgg
      721 tagagaaacc gcccatttgc agtacgcgta cttcgtcgcc gtatttttcg ccgaagagca
      781 tcatggcgtc ggttttttgc gcgtcttcca tgctcataat ggctgcgttg acggcaacgt
      841 tggctaaaac ggcttcgttg acgcggcgtt cgacttcagc gatttcttcg gcagttaccg
      901 cttggggatg ggaaatgtcg aaacgggtgg attcggcggt aaccaaagag cctttttgtt
      961 cgacgtgtcc gcccaatacg tcgcgcaggg ctttgtgcat caggtgggtc gcgctgtggt
     1021 tgcgcatatt ggcattgcgg atttcgtcat ccactttggc ggtaacgctg tcgccgactt
     1081 tcagacggcc tgaagtttgt acgccgaatt gtccgaatac ggccgctttg attttttggg
     1141 tatcgcgtac ttcaaagcgg ttttcgcctg cgaagatata gccgacgtcg ccgacttggc
     1201 cgccggattc tgcatagaac ggggtaaagt cgataacgac ggcaccgctg tcgccttcgt
     1261 tcaattcgac gacttgcccg ccgtctttgt agagggcgag gactttggat tcggtttggc
     1321 gttcgctata acctttaaac tcggtgtctt gaccgtcgta aggcagttgg gcgttggctt
     1381 tgaagctttg ggcggcgcgt gcgcgtgcgc gttgggcttc catttcgcgc tcgaagcctg
     1441 cttcgtccgg ttcgatattg cgttcgcggc agatgtcggc agtcaggtcg tatgggaagc
     1501 cgtaggtatc gtagagtttg aagataattt cgccgccgag tgttttgccg cctttggcca
     1561 gcgcgttttc caacaaagcc ataccggttt ccagagtttg ggcaaaacgg ctttcttcgt
     1621 ttttcaaagc ttcttcgatt tgcgcctgtt tttctttcaa ttcaggatac gcgccgccca
     1681 tctcttgaac caaatcggca acgagtttgt ggaagaacgg tttgctttga cccagtttgt
     1741 aaccgtggcg cacggcgcgg cggatgatgc ggcgcaatac gtagccgcgt ccttcgttgg
     1801 aaggcaatac gccgtctgca atcaggaatg agcaggagcg gatgtggtcg gcgataactt
     1861 tcaggctggg ttcttccata ctgaacggcg cgccggtttc gcgggcaacg gctttgagca
     1921 ggtcttggaa caggtcgatt tcgtagttgc tgtggacgtg ctgcatcacg gcggccatac
     1981 gttccaagcc cataccggta tcgacggacg gcttgggcag tggattcata ttgccttgtt
     2041 cgtcgcggtt gaactgcatg aatacgcagt tccaaatttc aatccagcgg tcgccgtctt
     2101 cttcggggct gccgggaatg ccgccccaga tttctttgcc gtggtcgtag aaaatttcgg
     2161 agcaggggcc gcaagggccg gtgtcgccca tttgccagaa gttgtcggac gcgtatttcg
     2221 cgcctttgtt gtcgccgatg cggacgatgc gttcagacgg cataccgatt tcgttcaacc
     2281 agatgttgta ggcttcgtcg tcttctgcgt aaacggtcgc caagagtttg tctttgggga
     2341 tgttgagcca ttcgggggaa gtgagaaact cccaagcgaa gtggatcgcg tcgcgtttga
     2401 agtaatcgcc gaaggagaag ttgcccatca tttcaaagaa ggtgtggtgg cgggcggtgt
     2461 agccgacgtt ttccaagtcg ttgtgcttgc cgcctgcgcg tacacatttt tgcgcggtgg
     2521 tggcgcggct gtacgggcgt ttgtcgaaac ctaaaaatac gtctttaaac tggttcatgc
     2581 ctgcgttggt aaacagcagg gtcgggtcgt cgtgcggcac gaggctggaa gagcggacga
     2641 cggtgtggcc tttggtttca aaaaatttta ggaatttttg gcgcagttcg gaggttttca
     2701 taattttttc aatgtctctc aaatgtcttg tcatggtaaa agcagggaaa acgaacggcg
     2761 gtatattacc gcaaatccct gtttctagct atggaagcgg cggctttcag acggcattgc
     2821 gggattttga atgccgtctg aagccctgtt accaatatcg gctataatgg ccgctttctc
     2881 caacccgata tgcaaggaat gataatggtc aaacatctgc cactcgccgt cctgactgct
     2941 ttgctgcttg cagcgtgcgg cggttcggac aaaccgcctg ccgaaaaacc ggcaccggcg
     3001 gaaaaccaaa acgtattgaa aatttataac tggtcggaat acgtcgatcc ggaaaccgtt
     3061 gccgattttg aaaagaaaaa cggcatcaag gttacttatg atgtgtacga cagtgatgaa
     3121 acgctggaaa gcaaggtgct gaccggaaaa tccggttacg acattgtcgc gccgtccaat
     3181 gcgtttgtgg gcaggcagat taaggcaggt gcgtatcaga aaatcgataa gtcgatgatt
     3241 cccaattata aacatctcaa ccctgaaatg atgaggctga tggacggggt cgatcccgac
     3301 cacgaatacg ccgtgccgtt ttattggggg acaaatacct tcgccatcaa taccgaacgc
     3361 gtgaaaaagg ctttgggtac ggacaagctg ccggacaacc agtgggattt ggtgttcaac
     3421 cccgaataca cgttcaaact caaacaatgc ggcatcagct atttggacag cgcggcggaa
     3481 atttatccca tggtgttgaa ctatttgggc aaaaacccga acagcagcaa tacggaagac
     3541 atcagggagg caaccgccct gctcaagaaa aaccgcccca atatcaaacg ctttacttcg
     3601 tccggcttta tcgatgattt ggcgcgcggc gatacctgcg taacaatcgg tttcggcgga
     3661 gatttgaaca tcgccaaacg ccgtgccgaa gaagcgggcg gcaaggaaaa aatccgcgtg
     3721 atgatgccga aagagggcgt ggggatttgg gtggattctt tcgtgattcc gaaagatgcg
     3781 aaaaacgtcg ccaacgcgca caaatacatc aacgacttcc tcgatccgga agtgtcggcg
     3841 aaaaacggca atttcgttac ctacgcgcct tcgagcaagc cggcgcgcga tttgatggag
     3901 gacgaattta aaaacgacaa tacgattttc ccgagcgggg aagatttgaa aaacagcttt
     3961 atcatggtgc ctatccggcc ggcggcattg aagtttatgg tgcgccagtg gcaggatgtg
     4021 aaggcgggga aataaagccc gatatgccgt ctgaaggatg ttcggacggc attttttatc
     4081 tttggcggaa gagggcttgc agccgctgtt tgaaggcaat ggggcggatg ctgctcaaaa
     4141 tgccgctgag gataatgatg cacataccga gtatttcctg ccagaaaagc tcttcgccca
     4201 gaaaaaatgc ggcagacagg gcggaaaaga cgacggtcat ataggaaagc gaggcaaccg
     4261 tgaatttgtc gccgactttg taggcgcgcg tcatcgacag ttgggcaatc agcgcggaca
     4321 cgccgatgcc cgacagataa accgccgatg gaaaggacag ggtgtgccag ccggtcagcg
     4381 tcgcccaaac cgacgacatc gccacgccgg ttgcggaaag gtaaaacacg acgcgccagc
     4441 cgggttcgcc cgccaaagac agttcgcgca ctttcaaata cgcccagccg gacatcgcgc
     4501 cgcccgccag cccggcgagt gccgccggtt cctgaccgct gcggaacgag ggattaagca
     4561 gcaataccac gccggcaaaa ccaaggagca gcaccgcctg cgtgtaaacg gaaatccgtt
     4621 ctttcaaaat caggaaggaa aataccgcca aaaaaatcga cgaggtgtaa ctcagggtaa
     4681 cgccggttgt caaaggcaga tgcgttaccg cgtaaaacag cagcagcatc gcccccgtcc
     4741 cgaccatact gcggtttaag tggtttttcc aatggggcgt gcggaaggtg tcgcgccgca
     4801 atacggcggc agcaccgagc gtaacggttg aaaacagcat gcgccaaaag accaattcgc
     4861 cgctgccgag ggcaaatttt gccgatgcct ctttaatcaa tacgttcata acggtgaagc
     4921 aggccgccgc caccagcatc cagcccgatc ctaaaatgtc tttttttgcg gtatccataa
     4981 acggtcgttg cgataaggac ggtcggattg taaaccttgc ggcaaggctt gtggaatgtg
     5041 tttttgcctg cttctgatgc cgaaatttta tttttcttgc cgaacaattt gttttctcaa
     5101 ggcaaacttg attataatgg cgggtatgaa aaaatacctt atccctcttt ccattgcggc
     5161 agtcctttcc ggctgccagt ctatttatgt gcccacattg acggaaatcc ccgtgaatcc
     5221 tatcaatacc gtcaaaacgg aagcacctgc aaaaggtttt cgcctcgccc cttcgcattg
     5281 ggcggatgtt gccaaaatca gcgatgaagc gacgcgcttg ggctatcagg tgggtatcgg
     5341 taaaatgacc aaggttcagg cggcgcaata tctgaacaac ttcagaaaac gcctggtcgg
     5401 acgcaatgcc gtcgatgaca gtatgtatga aatctacctg cgttcggcgg tagacagcca
     5461 gcgcggcgaa atcaatacgg aacagtccaa gctgtatatc gagaatgcct tgcgcggctg
     5521 gcagcagcgt tggaaaaata tggatgccaa acccgataat cccgcattta ccaacttttt
     5581 gatggaagtg atgaagatgc agcccttgaa atgacgcggt acgcaaatgc cgtctgaaag
     5641 ctttttcaga cggcatttgc gtttgaagcc ccgatttatt tttgcccgcc ttctttccgg
     5701 tattgccccg gcgaaacgtg atattgccgt ttgaacgcct tgccgaaatg cgtttccgac
     5761 tgaaagccca ccgacagcgc gacctccaaa accgaatccg gggttttctt cagcagcaat
     5821 gcgccttttt gcaggcggat atggttcaca aaggcgtgcg ggctgagtcc gacttggctt
     5881 ttgaagcggc gcatcagttg cgcgcgcgac atattggcgg cggcaaccat tttgtcaata
     5941 ttccattcgt cttccggttt gtctatcacc ttttggatca aatgtcccaa acgtttgtcc
     6001 tgccaacctt tcaatacgcc cgagagttcg acatccttat cctgttcgag ataggcgcgc
     6061 aggataagca ccagcaggac ggacggtaat gcgttgacca cggaaaccgt ccccgtcaaa
     6121 ggtttttcgc tttccagttg cagcattgaa accacatact gcaaacttgg atgggcaatg
     6181 ttcagaaaaa cggtttccgg cagcccgttc atcaaatcgg cgtgggtgtc gtagcggaaa
     6241 cgggcgcaaa acaggctcat atccagcccg ttgccgcact gtttgaccat aaatgtgccg
     6301 ttttgccgta tgtccggttg taaactttct ccgtattttc cgtcgtggct caacacatga
     6361 cccaagccgc gcgggaaaaa tacaatatcg cccgtgccga ccggacgcgg ggaagtttcg
     6421 ccgtcgatgc agagataacc gctgcccgcc gtaacaatgt gtaccagccc ttcgcattgc
     6481 aaggtttcat gccgtaccga ccattgtccg cccaaaaggc actgcacatc cgcactgccc
     6541 gtcaattggg cgagatcgac cagtttgtcc agaatgtcca taaatctttt tgaaccataa
     6601 aatgagatga ttaaacgaga aacacaactg aataattgca ataatacgca catcaaaaac
     6661 agatacgcaa gcgcgtatca gggttaaacg caagagaaag gaaaagaaaa tgtttaaaga
     6721 ttggaaagaa cataccgcat tggttaaaaa atcattcggc gagctgggta aggcgcatcc
     6781 taaaatgctg caagcctacg gcgcattgga acaggccgcc gccgccgaag cactcgatgc
     6841 caaaacgcgc gaactgattg ccatcgccgt tgccatcacc acccgttgcg agagctgcat
     6901 cagcgttcac gccgccgccg ccgccaaagc cggtgcgacc gacagcgaga tcgcaggtgc
     6961 attggcaacc gccattgccc tgaatgcggg tgctgcttac acttacgccc tgcgtgcatt
     7021 ggaagcggtt gaaacgcaaa aataatccgt ttcggataag aaatgccgtc tgaaaatatt
     7081 tcagacggca ttttgcctgt tatgcttccc gatattttgc agacaacata tgcagccgtt
     7141 tttttcagac ggcatttgag aaacatggaa caagtatgaa atatcaccgc ttggcattgt
     7201 ttgccgccat aagctgcctg ttgttgtccg ccgtttttat tgcaccttac ctgacggcat
     7261 ttcacgaaca agaaaaaata tttgaatatg cggatttgac cgttaccgcc cccaaccgca
     7321 gcggacgggc aatcaaattg gaggcggacg ggcggcagta ccggctttcc tgctacgggt
     7381 tcgacagttt gtgcacaggc ggcaatatcg gcagagccat cagggcgcgg caggttaaga
     7441 ttgttttaag cgaaaccgtc ggcaaaggtt ttttaaacgg cgttctgttg gaataccgca
     7501 acagtggcag tgtctatagc aataaagatt tttcccgcac ggaagaccgc cttgtcgaag
     7561 tgttggcaca acctgccgtt ttcagcctga aaccgggtat tttgctttta ttgcccgcca
     7621 ttttcctgcg tttgaaaaaa atgtgaaaac agattggcgg ggcgggggaa tgactatgcg
     7681 gcaattttac gttttgggtt atgaggataa ccgttataat cataatttta cagtccgcac
     7741 agagaaaacc gatgccttgg aacatcccca tcttcctcac atggttgagg gtcttgctca
     7801 ttcccgtact gattgtcctt ttctacctgc cgttctcatg gttttcagaa gaagcagtca
     7861 atgttgccgc cgccgtcatt tttgccgttg ccgccttgac cgactggttt gacggatttt
     7921 tggcaaggtt gtggaaacag acttccgatt tcggcgcatt cctcgacccc gtcgccgaca
     7981 agctgatggt tgccgtatcg ctgctgctgc tggtcaaact cgaccggacc tatgttttgt
     8041 tcgcgatgat tatcatcggc agggaaatta ccatttccgc attgcgcgaa tggatggcgc
     8101 aaatgggaaa aaggagcagc gttgccgtcg ccgccgtcgg caagttcaaa accgccgcgc
     8161 aaatgctggc gattttcttt ttgctgctga attttcccga tttttacgga tttaatcttg
     8221 ttgttatcgg caacatattg atgtttatcg catctttgct gacagtctgg tcgatgctgt
     8281 attatctgaa aatggcgtgg aaagaaattg cctgaaaaaa acataaaaat agcttgacgg
     8341 taaaaacata atccataata attgcgtctt cttcgatgtc ggagagtgaa atcgggcggg
     8401 aatagctcag ttggtagagc gcaaccttgc caaggttgag gtcgcgagtt cgagactcgt
     8461 ttcccgctcc aagttttgta gacaagccag ttttagggcg agatagcaaa gtggttatgc
     8521 agcggattgc aaatccgtct acgccggttc gattccgact ctcgcctcca tatatcttac
     8581 ggcggggtgg cagagtgttt atgctatgag gggtgcaacc ttcatatagg ccggttaaaa
     8641 tccgcgcccc cgcctccacc tttcacaaat gcccgggtgg tgaaataggt agacacaacg
     8701 gacttaaaat ccgtcgggac taaacatccc atgccggttc gattccggct ccgggcacca
     8761 agctgaaaat gacaatgccg ctccaagcgg ttattttttt atctgtcgga tggggatgga
     8821 caatattgat atgttcatgc ctgaacaaga ggaaatccaa tcaatgtgga aagaaatttt
     8881 actgaattac ggtattttcc tgctcgaact gcttaccgtg ttcggcgcaa ttgcgctgat
     8941 tgtgttggct atcgtacaga gtaagaaaca gtcggaaagc ggcagtgtcg tactgacaga
     9001 tttttcggaa aattataaaa aacagcggca atcgtttgaa acattctttt taagcgagga
     9061 agagacaaaa catcaggaaa aaaaagaaaa gaaaaaggaa aaggcggaag ccaaagcaga
     9121 gaaaaagcgt ttgaaggagg gcggggagaa atctgccgaa acgcaaaaat cccgcctttt
     9181 tgtgttggat tttgacggcg atttgtatgc acacgccgta gaatccttgc gtcatgagat
     9241 tacggcggtg cttttgattg ccaagcctga agatgaggtt ctgctcagat tggaaagtcc
     9301 gggcggcgtg gttcacggtt acggtttggc ggcttcgcag cttaggcgtt tgcgcgaacg
     9361 caatattccg ctgaccgtcg ccgtcgataa ggtcgcggca agcggcggct atatgatggc
     9421 gtgtgtggcg gataaaattg tttccgctcc gtttgcgatt atcggttcgg tgggtgtggt
     9481 ggcggaagtg ccgaatatcc accgcctgtt gaaaaaacat gatattgatg tggatgtgat
     9541 gacggcgggc gaatttaagc gcacggttac ttttatgggt gaaaatacgg aaaagggcaa
     9601 acagaaattc cggcaggaac tggaggaaac gcatcagttg ttcaagcagt ttgtcagtga
     9661 aaaccgcccc gggttggata ttgaaaaaat agcgacgggc gagcattggt tcggccggca
     9721 ggcgttggcg ttgaacttga ttgacgagat ttcgaccagt gatgatttgt tgttgaaagc
     9781 gtttgaaaac aaacaggtta tcgaagtgaa atatcaggag aagcgaagcc tgatccagcg
     9841 cattggtttg caggcggaag cttccgttga aaagttgttt gccaaacttg tcaaccggcg
     9901 agcggatgtg atgtagtttg ccgaacggat ggaaatgccg tctgaagtgt gttcagacgg
     9961 catttttcaa gttccggctt tgatgttccg ttccgaccac tctatccgtt gtccgatgtc
    10021 tttcaaattg gaatattgtt cgaccaatcg cggcacatcg tccaaactca tggcaaacat
    10081 ccacagataa gtgccgaccg aataaatatg ccccgcgctg ccgtagcctt tgagcgtcat
    10141 catcacaaaa gcaaagccga acaaaatacc catcgccgcg ccgacgcaga gatagccgaa
    10201 ggcttcgcgg ttggaaatca gcacacgcag gcgcgaaacc agtccgtaat ggcggtacag
    10261 ctgccgctcg tcgaagtggt tgtcgcgttc caagctgttg ttcaggcgga aatacaggtt
    10321 ttcgctgatg gcggcaaaac gtggcaaaag ccataaaaac aacgcaagta tgcccaccgc
    10381 cgacacgccg acccaaaatt ccagcaccag cagcatgatg cacgcgccga atatggatac
    10441 gacggatgtc gcggcaatcg gcaggtgttc ttcaaaaaag ctgacaaatt cacgcgacag
    10501 ggcaacccgt gcagttaccg ctgaatgcgg gacttgccgc tgccgttgtt ccaacacaac
    10561 cggcacggcg atttcggtat aaatccgcgt aaacgtgcgc gtatcggcaa tccgccgtgc
    10621 cgcaccgacc agccacatca aaaatacaac caaagcgtac agcaacgcct gccacaccct
    10681 ccccgcaatc acggcattaa tcgcccagcc gccaaacacc ggatacccca gcatcaaaag
    10741 gttttccagt ccgaccgggg aaaatgtgcc aatcaatcgc ttgcggtggg ttttggctat
    10801 gtgtttcaac attttccaca tatttgtccc tctatttttt attttccgag attgtttttt
    10861 ccatcacttc cgccagtgca tccaaatcgg caaacagccg ggttgtgcgc ttgtcgccga
    10921 atgtggaaaa tactttgtcg ctgaattcct gcgcgttttc tgttaaaggt gcggcatgga
    10981 ctttgccttt ttcggtcagc gacagcaacc gttcgcgcct gtcctgttcg ccttcctgcc
    11041 attcaatcaa cccttgtccg gcaagggttt tgcatacgcc tgaaacggtc tgtttgggca
    11101 gactccactc ttctccgatg tgcttttgcg tgcggctgcc ttcggttgcc agggtataaa
    11161 gtacggtaaa gaggttgtaa ttcaaatcct gctgcccgat ccatttgtca aagacattgc
    11221 aaatcaggtt gatacggatt ccaagttggt cgagtcggtt cataattggt cttgatattg
    11281 actaaatttg tgcggattat agtggattaa caaaaaccgg tacggcgttg cctcgccttg
    11341 tcgtactatt tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta
    11401 tatagtcata atcgggactg atttcaagcg tggggcgata aaaatgccgt ctgaaacgct
    11461 ttctggcttc agacggcata ttgtttggaa agggaagtca gtgttctgcc aatttcaggt
    11521 aaacgccgga aacgtcctgt tcgccgtagc cggcttcaac tgctttgcgg tagctggcag
    11581 caacggtttc gacggcgggc agggtgttgc ctgcctgttc aagttctttg acggcgaggt
    11641 taaggtcttt ggaagcgtgt ttgagtgcaa aggcaggggg ggaactcacg gtttgcccat
    11701 agtgattttt ttgtttgaaa cataggcgag tccattgccg agccgccgat ggcttcgacg
    11761 atggtgtcgg tatcgatgcc gaactgccgc gccatcagca tcgcttcgct gtacgcttcg
    11821 ccgaaaatgc ctaagagcga gttcaagacg agtttcgcgc ccgagccttt gccgacatcg
    11881 ccgaaatgga aggttttttt gccgacaagg gaaaatattt tttgcagcgg gtttaaaacg
    11941 gcttcgctgc cgccgaacag aatcagcagt gtgccgttgg tggcgggtcc gaccgatccg
    12001 gaaacgggtg cttcggcaaa ctgtccgcct gcggcttcga caagtgcttt gacggcgagg
    12061 ttttcggtcg gggagatggt gctcatgttg acgatgattt tgccggccaa tccgtcgcgg
    12121 actccgttca ggatgtcgca cacggcggca tagtcggaaa ccatcaggaa aatgacgggg
    12181 caggcgcgga cgagttcggc ggtgctgccg taaacttttg ctcctttggc ggagatgggg
    12241 gcagttttgt cgggcgagcg gttgtatacg ccgacttcga tgccgccgtc caagagccgc
    12301 gttaccatag gcagacccat ttgccctaag cctacccagc cgatttgtgt gtatgtttct
    12361 gcggacatag tgtttctcct ttgttggggc gctgtgatgc cgtctgaagg cttcctgcgc
    12421 ttcagacggt ctgtttgggg atgttatgcg gtcagcgtgc ctttggtcga gggggtttgc
    12481 ccagccattc tcgggtcgtg ttcgactgcc atacgcaggg cgcgcccgaa ggctttgaat
    12541 acggtttccg cctgatggtg ggcgtttttg ccgctgaggt tgtcgatgtg cagggtcatc
    12601 atgctgtggt tgacgatgcc gtggaaaaat tcttcaaaca aatcgacatc gaaacgtccg
    12661 attagtgcgc gggtaaattc gatgttgtac acgagtccgg ggcggccgga aaggtcgatg
    12721 acgacgcggc tgagggcttc gtcgagcggg acgtaggaat gtccgtaacg gcggatgcct
    12781 tttttgtcgc cgagtgcctg ccggattgct tgtccgagtg tgatgccgat gtcttcggcg
    12841 gtgtggtggt cgtcgatgtg caggtcgcct ttgcagctga tgtcgatgtc aatcatgccg
    12901 tggcgggcga tttggtcgat catgtgttcg aggaagggaa cgccggtatc cagcctgctt
    12961 ttgccgctgc cgtcgaggtt gatggagacg gtgatttggg tttcgcaggt attgcggttg
    13021 acggtaacgc tgcggcagcc ggcagcagat gcggtttcgg caattcgggt ttcggcagtt
    13081 ccggtgcttt ctgcggcggt ttcggggaca gtgcgttcgc ggtgttttct gtcgagccag
    13141 cctttgggtt tgccggtgtg tttttcgagt tttgccatca ggctgggacg gatgccgcgc
    13201 gcatcggggt cttctgcctg cttttcaagg cgttgtttga gtttgtaaag tgcgacgggg
    13261 gtacggtagc cgcagagttt ggcaagcttg ggcagcgaac ctgcttcttg ggcgagagtc
    13321 aggaagttgt tcaggtggag ttgtgtcttg gtcataggga ttccgtttgg tttatcggta
    13381 gagccggcgg ataacgtcga ggacggcatc gttttgtgcg gagctgccta tggtaatgcg
    13441 caggcagtgt tccaaaagcg gatgtgcgcc gtgcagtttt ttgacgagga tgcggttttg
    13501 tttgagtgtg tcaaacaaca aatcggcatc gggtacgcgt atggtaatga agtttgcctg
    13561 acttggaaag gcgttcagac ggcatatttt gcccaattcg gcgaacatcc gttcgcgttc
    13621 gtttttcagg ctgtcgatgt tggcagaaat gatgccgtag tgttgcaggg cgagtttggc
    13681 ggtggtcagg ctcagttggt tcatattgta gggcggcagg attttttgca gttcgccgat
    13741 gacttcggga cagcctgtcg cataaccgat acgcagtccg gcaaaaccga ttttgctgag
    13801 ggtgcgtaag actatcaggt tgggaatcct gcccgcctgc ggcaggaagc tgtcgccgtt
    13861 gaatgcgccg taggcttcgt cgacgacgac gatgccgtct gaagcttcga tggcggcttc
    13921 gatttcggca cgcgtgaaac atacgccggt cgggttgttc gggtaggcga taaaggtcag
    13981 ggcagggcgg tgcttcctga cggcttcgag gacggcgggc aggttgaggg tgaaatctcc
    14041 gttcagtgga acgccgacat aatccatgcc gtacagcgcg gcgttgtggc ggtacatgat
    14101 gaaaccgggt tcggctgcca acattgccgc gccgggtttg gcggtcagca tggtgatgaa
    14161 ctgtatcagt tcgtccgaac cgttgcctaa ggcgacggcg gcgcagtcag ggatgtcgaa
    14221 cgccgaacgc aatgcttcct gcaaaccgca gccggagggg ttgggataga ggtggatggg
    14281 ggcggatgcc agttgcgccc gccattcccg catcagggct tcgtgcccct caaaaggatg
    14341 ggcggggctt tccatcgcat cgagtttggc aaaaccgggc ggaacatcgg tgattttgta
    14401 tgcggacatg gcgaggatgt cgttgcggat gaaggagcgg acggatttca tcgtgtttcc
    14461 ttaatggttg gaatatgcct gtacgccgtt tcggcattat ttcatacgga actctgccgc
    14521 gcgtgcgtgg gcggtcaggc tttcgccgtg tgccagcacg ctggcggttt cgcctaattt
    14581 ttgcgcgccc tgttccgaaa cctgaatcag gctggagcgt ttttggaaat catatgtccc
    14641 caaaggcgag gaaaagcggg cggttcggct ggtgggcaac acatggttcg ggccggcgca
    14701 gtagtcgccg aggctttcgc cggtgtagcg tcccatgaaa atcgcgccgg catggcggat
    14761 ttttttcgcc cattcctgcg ggttttcgac tgacagttcc aagtgttcgg gggaaatgta
    14821 gttggagatt tcgcaggctt cgttcaagtc tttaacgagt atcatcgcgc ccctgttgcc
    14881 gagcgaggcc tcgatgatgt cgcggcgcgg catggtttcg atgagcctgt ccatagcggc
    14941 ttctacttcg tcgagatacg cttgcgacgt gccgatgagg atggcttggg caatttcgtc
    15001 gtgttcggcc tggctgaaca aatccatcgc cacccaatcg gcgggtgtcg tgccgtcggc
    15061 gatgaccagt atttcagacg gccccgccac catgtcgatg ccgaccacgc cgaacacgcg
    15121 gcgtttggcg gcggcgacga aggcgttgcc cggaccggtg attttatcga cttgggggat
    15181 ggtttccgtg ccgtaggcga gggcggcgat ggcttgcgcg ccgccgacgg tgaagacttt
    15241 ggttacgccg gcgacgtatg cggcggcaag cacgatgtcg ttgcgttcgc ctttcggtgt
    15301 cggtacgacc ataatgattt ctttcacgcc tgcgacgtgg gcgggcatcg cgttcatgat
    15361 gacggaactc ggatatgccg ccttgccgcc tgggacgtaa atgccgacgc ggtcaagcgg
    15421 ggtaatctgt tgccccagca gcgtgccgtc ttcatcggtg tagctccacg attccatttt
    15481 ttggcgttgg tggtagcttt cgacacggcg ggcggcggtc tgcaatgctg tctgaacgtc
    15541 gttcggaatg cgctcgaacg ccgcgttcaa atcggcttgc gtgagtatta aatcatcgat
    15601 gcttttagcg tttgtctgat cgaatttgtt ggtgtattca atcaaagccg catcgctgcg
    15661 cttttgcacg tcggcgcaaa tgtcggcgac gatgcgttcg gtttcggggt tttgcgcggt
    15721 ttcaaaagcc agcagggctt tgagtccggc ttggaaatcg ggcgattggg tgttgagttt
    15781 tttcatgatt tgggattctc ctttgttatt ttgggacttg ggatcgtctg aagcgtctct
    15841 tgctcggttt tgggtctgat atacgctttt cctcccccgc taccaaactt caattcgggc
    15901 aggcattttt gttgcagacc gagtttggct aatacctctt cgctacgaga ggtagtacgg
    15961 aaacggtaac gggtttgttt tctgccgttt ttggtttcct cagtcattgt ttcaaaaccg
    16021 tccacttcgt acgcactgac aacagcgttt tgcagaccgg tgtgaacgcc gataacgtat
    16081 ttcacttttg atgcaacatc tttaccgata acccagttgc ccaacgtacg cgatttgagg
    16141 ttggcatcgt cttggttgtc gaaaaggtag tctaattctt cgtcagtatc taaatcgaaa
    16201 gcattgtgga tcttgatggc gagaatcagc ccgtcggggt taatctcgct aagtgggaga
    16261 gaagagaatc caaagcggcg atctagttct tctacgctaa taccacccgg accatgcccg
    16321 gcaattttat ttttgagttt tttacccaag acagatttaa caaaatgaat taaggcagat
    16381 tcggcggcga gcgcttcgac ttcagtcaga tgatagctga tgatatagcg accgagtttc
    16441 ttgcatttgg agatggcttt gagtttccga tcgataatct cgccggagac tgggtcttgt
    16501 gaacgactag caacccattc atgctcgaag atacgattac cgcaaccttt tccgatgtag
    16561 aggattttgt cttttttcag gtcggtcaga caatagacat aaaaccgacg ctcgccgtta
    16621 ttcaaaacgg aaagggtcga atctgagaat ttttttattt ttgcaaccat tttaacttct
    16681 cctatacagt ttactgccgg tgatattttc agacggcctg tcggcgggaa cggatagggt
    16741 cgtctgaaaa cgcatcttta ttcaaatgaa tgcccacttc gccttcactg cgccgccgaa
    16801 cgactgaata atcggctcca gcagcgcgta tttcgttttc aaagcagcct tgttgaccac
    16861 caggtagctg gaaatgtcga cgatgtgttc gactgcctcc aagccgtttg ccttcaaggt
    16921 gtttcccgtc gaaaccaagt ccacaatcgc atcgctcaag ccgaccagcg gcgcaagttc
    16981 catcgagccg tacagtttga taatgtccac atggacaccc ttgccggcaa aatgagatgc
    17041 cgcgatttca ggatacttcg tggcaatctt cagacggcat ccgggttgcg aagcggcttc
    17101 gtaatcaaac cctttacgca cagcaaccat catgcggcac ttggcaatct ccaaatccaa
    17161 aggtcggtaa agccccgtgc cgccgtgttc gatcagcacg tctttgcccg caatgccgaa
    17221 gtccgccgcg ccgtagcgga cataagtcgg cacatcggtt gcgcggacaa tgacaaggcg
    17281 gatgttttca tggttcgtcc cgataatcag cttgcgcgat ttttcgggct cttcagtcgg
    17341 agcaatgccg gcagcggcaa gcagcggcag cgtctcctca aaaatgcgcc ctttggataa
    17401 ggcgatggtc aaagcattat cctgcatggt gtggatgtcc tttgtcggtt gaaacaataa
    17461 tgccgtctga acaggcaccg gcggtgcaga cggcatacgg ttttatcaga gcagggtcct
    17521 tacatcggca gcaatcgttt ccggctcgct tccgtaaggc gagaaaatgg caacctcacc
    17581 gtttttatcg ataagatacg caccggaaga gtggtcgacc aaatagtttt cgctgtcgtc
    17641 tttttgattg attttggcag aaaccacgcg gtattgctgc ttgatgaccg gcaggttttg
    17701 accgcccgtt gccgtcagac cgataaagtc cggattgaac tgtttggcat acttgccgat
    17761 gatttcaggc gtgtcgcgtt ccggatcgat gctgacgaac accactttca cgtccttagc
    17821 ctgcccgccc aactgcttca aagtgtcgct gtacgtcaaa agctctgtcg ggcagacatc
    17881 gggacagtgc gtaaagccga aagacagaat cacgaccttg cctttcaaat cgctcaggct
    17941 gaaaggcttg ccttcgccgt cggtcagcgt gaaatcgccg ccgatgtctt ccttacgcat
    18001 atccgtaccg cgcgtttgcg gctttgccgc attttccgca gccggcgcgg atgcacttga
    18061 agaagcggct tgcgccgcac tgttgtcttg aggtttgcag gcggcaagcg cggcaagtac
    18121 gaaaacgccc ggcaaaaagg aacgcggtac ggaaaacatg acaatctccc aagaataaat
    18181 agaaaaacct gattcgtacg gaatttgaat atttccatct taacgcgttt ggcagattta
    18241 atgtagtatt tttttacgtt gtccgtacgg caggaattgc cgaatcatac agaatctttg
    18301 gagcggaaag aacagtaaga ttaaaataat aaaaattcta tttaaaatca aaaacaaaat
    18361 aaaaacagat aaaataattt caaaaaaagg tttacagaat ctcaaaatcc attataatgg
    18421 caatttcttc accagcccag gtggcgaaat tggtagacgc aggggactca aaatcccccg
    18481 ccgcaaggtg tgtcggttcg agcccgaccc tgggcaccac aaccgctttt ggagcggtta
    18541 tttttttgtc tatt
//
LOCUS       DAWXHA010000035        18429 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.035, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000035 DAWXHA010000000
VERSION     DAWXHA010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18429
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.035"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            6..81
                     /locus_tag="AABD07_000896"
     tRNA            6..81
                     /locus_tag="AABD07_000896"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="AABD07_000897"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="AABD07_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HFB2355460.1"
                     /translation="MTEHTPEKKNVKVNQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="AABD07_000898"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="AABD07_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HFB2355461.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="AABD07_000899"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="AABD07_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HFB2355462.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMESGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="AABD07_000900"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="AABD07_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HFB2355463.1"
                     /translation="MAKVSKRLKVLRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDSRKSDQVIRGSVVLPKGTGKTTRVAVFTQGVNAEAAKEAGADVVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKIGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGVRVDTSSVNN"
     gene            2470..2970
                     /gene="rplJ"
                     /locus_tag="AABD07_000901"
     CDS             2470..2970
                     /gene="rplJ"
                     /locus_tag="AABD07_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HFB2355464.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFVELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3028..3399
                     /gene="rplL"
                     /locus_tag="AABD07_000902"
     CDS             3028..3399
                     /gene="rplL"
                     /locus_tag="AABD07_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HFB2355465.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEAAGAKVEIK"
     gene            3590..7768
                     /gene="rpoB"
                     /locus_tag="AABD07_000903"
     CDS             3590..7768
                     /gene="rpoB"
                     /locus_tag="AABD07_000903"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HFB2355466.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVYYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEQESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTNKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKERRKAGELREFLNKLYNGSGKKEDLDSLTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            complement(7733..7873)
                     /locus_tag="AABD07_000904"
     CDS             complement(7733..7873)
                     /locus_tag="AABD07_000904"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355467.1"
                     /translation="MDKGTVLSDGISFLNIVGLPRIPAEQLPLCRLKPVSVAFQIDIQ
                     TQ"
     gene            7921..12096
                     /gene="rpoC"
                     /locus_tag="AABD07_000905"
     CDS             7921..12096
                     /gene="rpoC"
                     /locus_tag="AABD07_000905"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HFB2355468.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLNMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENMEEGVTVAKQTDDVTGLSALVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENILLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12384..12800
                     /locus_tag="AABD07_000906"
                     /pseudo
     CDS             12384..12800
                     /locus_tag="AABD07_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360919.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12825..13454
                     /locus_tag="AABD07_000907"
     CDS             12825..13454
                     /locus_tag="AABD07_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355469.1"
                     /translation="MSEQKIEFYGADKEQNYALLKTWVYEQPYSVVRGYFGYSRKDGN
                     PIEEDGQNPEEIPFDLYLGDIRGVATDEDKLPKAGSFQYEGRAFGGNGVLSKESLDNH
                     NGVFRYTIDFDRRKGSGSIEGMEQYGKIKLEEAAIERIPYRESGSSLGLKDRVSYFGV
                     NEGVAMLEKDNEIKKYHLGIFGEAANEVAGAVSQEHKHQAVIGFGGEKK"
     gene            13692..13934
                     /locus_tag="AABD07_000908"
     CDS             13692..13934
                     /locus_tag="AABD07_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355470.1"
                     /translation="MKSKNIFFMGYLIASATFAEDIGVPVEPINVGSRAAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGGRSIP"
     gene            13846..14835
                     /locus_tag="AABD07_000909"
     CDS             13846..14835
                     /locus_tag="AABD07_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HFB2355471.1"
                     /translation="MCRRFAMQCRLKFLKARQAAMFEAADLYRELLSERPDLVYPRFD
                     LGVMLFEDKQYREALVQLHRAEEVLPPDMRQLAREYIRQAEAVQAWHPSFNMNYEQTD
                     NVNNASLSRDIVINGRKWIKSEDSLPKRANGIRYELGVDRMFNMAGNHFARLGISGSG
                     VHYWNARDFSEQAFHAEVGYRYRNSRLEWGFRPFVKQNRLGNNRYTANTGIVLDYSRR
                     LNEKWRSTQSFQYGRKQYHDEYLAKRYNSKTISVSGTFSYYAMSAWQLYGGISGMFDN
                     TVEKEQASRRYGVSLGTVKILDGGLGLKLGAGYTKRIFKAPATLIYNFTRRDD"
     gene            14842..14991
                     /locus_tag="AABD07_000910"
     CDS             14842..14991
                     /locus_tag="AABD07_000910"
                     /inference="COORDINATES: protein motif:HMM:NF016462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HFB2355472.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKNNSNMPAFYSHSGKGWFVS
                     MEKTY"
     gene            15170..15541
                     /gene="rpsL"
                     /locus_tag="AABD07_000911"
     CDS             15170..15541
                     /gene="rpsL"
                     /locus_tag="AABD07_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HFB2355473.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            15659..16129
                     /gene="rpsG"
                     /locus_tag="AABD07_000912"
     CDS             15659..16129
                     /gene="rpsG"
                     /locus_tag="AABD07_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008649176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HFB2355474.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKAAIEVFNEAIANSKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            16148..18253
                     /gene="fusA"
                     /locus_tag="AABD07_000913"
     CDS             16148..18253
                     /gene="fusA"
                     /locus_tag="AABD07_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HFB2355475.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDSFTGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGEDLAEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            18341..>18429
                     /locus_tag="AABD07_000914"
     CDS             18341..>18429
                     /locus_tag="AABD07_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011863965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HFB2355476.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTA"
BASE COUNT         4980 a         3995 c         4780 g         4674 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgccggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaatgttaa agtgaatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggagggttt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgccgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcga attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ttagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 tccccgtgtt tctggtttta ttggagggag ggctaataga cccacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaagga ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgag aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagtccgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggc aaagccaatc catccccccc agttggtcct gctttgggtc
     1201 aacgtggttt gaatatcatg gaattctgta aagcatttaa tgctgcaacc caaggtatgg
     1261 aatctggttt gccaattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac tcctccggcc tctattctgt tgaaaaaagc cgccggtttg caaaaaggta
     1381 gttctaatcc tctgacaaac aaggtaggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agagcctgat ttgactgctg ctgacttgga tgcggctgtt cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggacg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagttcttc gctcttctgt tgaagctaac aaactgtacg caatcgacga
     1621 agcaattgcc ttggttaaaa aagctgctac cgctaaattt gacgaatctg ttgacgtatc
     1681 tttcaacttg ggcgttgatt ctcgtaaatc tgaccaagtt atccgtggtt cagtcgttct
     1741 gcctaaaggt actggtaaga caacccgtgt ggctgtattt actcaaggtg taaatgcaga
     1801 agctgctaaa gaggctggtg cggatgtcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg atgttgttat tgcttctcct gatgcaatgc gtatcgttgg
     1921 tcaattgggt accatcttgg gtcctcgtgg tctgatgcca aaccctaaaa taggtacggt
     1981 tacccctaat gttgccgaag cggtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcgttcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggacgc tatcgttaaa gccaaacctg ctgctgctaa
     2161 aggtcagtac ctgaaaaaag ttgctgtatc cagcactatg ggtttaggtg ttcgcgttga
     2221 tacatcaagc gtgaataact aatctaagaa attttcaagc aactctgttt ttgagttgct
     2281 tgaatttggg ctacttaaaa ttaagtagat gtccaagacc gtagggatcg taagatttaa
     2341 tcgtaactgc cctacgcaga cggtagtcct gaaacacatt gcaagattgc ttgtaagatg
     2401 tctttttagg ttaccgcgct ggtgggatat cgttttggta tcctgtttat aaacagtggg
     2461 aggtagacct tgagtctcaa tattgaaacc aagaaagtgg cggtcgagga aattagcgcg
     2521 gcaattgcta atgctcaaac cctcgtagtc gctgaatatc gcggtatcag tgtttccagt
     2581 atgactgagc ttcgtgcgaa tgcacgtaaa gaaggcgttt atttgcgcgt tctgaaaaat
     2641 actctggctc gtcgcgcagt gcaaggtact tcatttgtag aattggccga tcaaatggtt
     2701 ggtccgttgg tttacgctgc ttctgaagat gctgttgctg ctgctaaagt gttgcaccaa
     2761 ttcgcgaaaa aagatgacaa aattgtcgtt aaagccggtt cttacaatgg cgaagtaatg
     2821 aatgctgctc aggttgctga gttggcttct attccgagcc gcgaagagct gttgtccaaa
     2881 ctgttgttcg ttatgcaagc tcctgtatcg ggctttgcgc gcggtttggc tgctttggca
     2941 gagaaaaaag ccggcgaaga agctgcttaa tcgattttgt ttctgttaat caattatttt
     3001 ttaatacaat atttggagta aaatagcatg gctattacta aagaagacat tttggaagca
     3061 gttggttctt tgaccgtaat ggaattgaat gacctggtta aagcttttga agaaaaattc
     3121 ggtgtttctg ctgctgctgt tgcagttgca ggtcctgctg gtgccggtgc tgccgatgct
     3181 gaagaaaaaa ccgaatttga tgtcgttttg gcttctgccg gcgatcaaaa agtcggcgtg
     3241 attaaagttg tccgtgcaat tactggtttg ggtctgaaag aagctaaaga catcgttgac
     3301 ggcgcaccta aaaccattaa agagggtgtt tctaaagctg aagccgaaga catccaaaaa
     3361 caactggaag cagcaggcgc taaagtcgaa atcaaataat ttgatgcttc ttatgaaggc
     3421 tggcagtttt ctgccagcct tattttgctt cttaaaataa gcattaagta ttgtttacat
     3481 ttatttgcat agtttttatc aaatcattgc aaataaatgt aaatatcaga ttgatgcgta
     3541 ccgttgtttt cagacggcct attattgaaa attacttttc ggagtgtgta tgaactattc
     3601 gtttaccgag aaaaaacgta tccgtaagag ttttgcaaag cgggaaaatg ttttggaagt
     3661 tccttttcta ctggcaaccc aaattgattc ttatgcgaaa tttttgcagc tggaaaatgc
     3721 ttttgacaaa cgtaccgatg acggtctgca agcggcattt aattctattt tcccgattgt
     3781 gagccacaac ggttatgctc gtctggagtt tgtatattac acgctgggcg agcctttgtt
     3841 cgatatccct gaatgtcaat tgcgcggaat cacttatgct gcccctctgc gcgcgcgtat
     3901 ccgtttggtg attttggata aggaagcgtc taaaccgacg gtaaaagaag ttcgtgaaaa
     3961 cgaagtgtat atgggcgaaa ttccgttgat gaccccgagc ggttcttttg tgattaacgg
     4021 cacagagcgt gtgattgttt cccagttgca ccgttcgccc ggtgtgttct tcgagcatga
     4081 caaaggtaag acacactctt ccggcaaatt gttattctcc gcccgcatca ttccctaccg
     4141 tggttcatgg ttggattttg aatttgatcc gaaagatttg ctgtatttcc gtatcgaccg
     4201 ccgccgtaaa atgccggtaa cgattttgtt gaaggctttg ggctacaaca atgagcaaat
     4261 cttggatatt ttctacgaca aagaaacgtt ttatttgtct tcaaacggtg ttcaaaccga
     4321 tttggtcgca ggccgtctga aaggcgaaac tgccaaggtc gatatcttgg ataaagaagg
     4381 caatgtattg gttgccaaag gtaagcgcat tactgcgaaa aatatccgtg atattaccaa
     4441 tgcaggcctg acccgtttgg atgtagaaca ggaaagcctg ctgggcaaag cattggctgc
     4501 cgatttgatt gattcggaaa ccggcgaggt attggcttct gccaatgatg aaattacaga
     4561 agagttgttg gccaaatttg atattaacgg cgtaaaagaa attacgaccc tttacatcaa
     4621 tgagttggat cagggtgctt atatttccaa taccttgcgc acggatgaga ctgccggccg
     4681 gcaggcggcg cgtgttgcga tttaccgtat gatgcgtccg ggcgaaccgc ccaccgaaga
     4741 ggcggtcgag caattgttta accgcttgtt cttcagtgaa gacagctacg atttgtcccg
     4801 cgtaggccgt atgaaattta atacgcgcac atacgaacaa aaactgtccg aagcccaaca
     4861 aaactcttgg tacggccgcc tgttgaacga gacgtttgcc ggtgctgccg acaaaggcgg
     4921 ttatgtcctg agcgtcgaag atattgtcgc ctcgattgcg actttggtcg agttgcgtaa
     4981 cggccatggc gaagtggacg atatcgatca cttgggcaac cgtcgagtac ggtcggtagg
     5041 cgagctgact gaaaaccaat tccgcagcgg tttggctcgt gtggaacgtg ccgtaaaaga
     5101 acgtttgaat caggcggaat cagaaaactt gatgccgcac gacttgatta atgcgaaacc
     5161 cgtttctgcc gccatcaaag aattcttcgg ctccagccaa ttgagtcagt ttatggatca
     5221 gaccaatccc ttgtctgaag taaccaataa acgccgtgta tctgcattgg gcccgggcgg
     5281 tttgacccgc gaacgtgccg gcttcgaagt gcgggacgtg catccgaccc actatggacg
     5341 tgtatgtcct attgaaacgc ctgaaggtcc gaacatcggt ttgatcaact cattgtctgt
     5401 ttacgcgcgc accaatgatt acggtttctt ggaaacgcct taccgccgcg ttattgacgg
     5461 caaagtaacc gaggaaattg attacttgtc tgccatcgaa gaaggccgct atgtgattgc
     5521 acaggcgaat gccgatttgg attcagacgg caatctgatt ggcgatttgg ttacctgtcg
     5581 tgaaaaaggc gaaaccatta tggcaacgcc cgaccgcgtc caatatatgg acgtggcaac
     5641 cggtcaggtg gtatccgttg cggcatccct gattccgttc ttggaacacg atgacgcgaa
     5701 ccgcgcattg atgggtgcca acatgcaacg tcaggcagtg ccttgtctgc gtcctgaaaa
     5761 accgatggtc ggtaccggta tcgagcgttc cgttgccgtt gactctgcta ctgcaatcgt
     5821 tgcccgccga ggcggcgtgg tcgagtatgt cgatgccaac cgcgttgtga tccgtgtcca
     5881 tgacgacgaa gcgactgccg gcgaagtggg tgtcgatatt tacaatttgg ttaaattcac
     5941 ccgttccaat caatctacca acatcaacca acgtccggct gtcaaagcag gcgatgtttt
     6001 gcaacgcggc gatttggtgg ccgacggcgc gtccaccgat ttgggcgaat tggctttggg
     6061 tcaaaatatg accatcgcct tcatgccgtg gaacggttac aactacgaag actcgattct
     6121 gatttccgaa aaagtggctg cggacgaccg ctatacttcg attcacattg aggaattgaa
     6181 tgtcgttgcc cgcgatacca agctgggtgc ggaagacatt acccgcgata ttccgaactt
     6241 gtccgagcgt atgcaaaacc gtttggacga atccggtatc gtttacatcg gtgcggaagt
     6301 agaagccggc gatgtgttgg taggcaaggt aacgcctaaa ggcgaaaccc agctgacgcc
     6361 ggaagaaaaa ctgctgcgcg ccatcttcgg cgaaaaagcg tctgacgtaa aagatacttc
     6421 attgcgtatg cctaccggta tgagcggtac ggttatcgac gttcaagtct ttacccgcga
     6481 aggcatccaa cgcgacaaac gcgcccaatc cattatcgat tccgaattga aacgctaccg
     6541 tttggatttg aacgaccaat tgcgtatttt cgacaacgac gcattcgacc gtatcgagcg
     6601 tatgattgtc ggtcagaaag ccaacggcgg tccgatgaag ctggccaaag gcagcgaaat
     6661 cacgaccgaa tatctggcgg gtctgccgag caggcacgat tggtttgata tccgtttgac
     6721 cgatgaagat ttggccaagc agttggaact gattaaattg agcctgcaac aaaaacgcga
     6781 agaagcggat gagttgtatg agatcaagaa gaaaaaactg acccaaggcg acgagctgca
     6841 acccggcgta caaaaaatgg tgaaagtctt tatcgccatc aaacgccgtc tgcaagccgg
     6901 tgacaaaatg gcgggccgcc acggtaataa aggtgtggta tctcgcattc tgcctgtgga
     6961 agacatgccg tacatggcgg acggccgtcc tgtggacatc gtactgaacc cgttgggcgt
     7021 accttcccgt atgaacatcg gtcagatttt ggaagttcac ttgggttggg cggcaaaagg
     7081 tatcggcgag cgcatcgacc gtatgctgaa agagcgacgc aaagccggcg agctgcgcga
     7141 gttcttgaac aaactctaca acggcagcgg taagaaagaa gatttggaca gcctgactga
     7201 tgaagaaatc atcgaattgg cttccaatct gcgtaaaggt gcatctttcg cctctcctgt
     7261 attcgacggt gcgaaagagt ctgaaatccg cgaaatgttg aacttggctt acccaagcga
     7321 agatcctgag gttgagaaac tgggcttcaa cgacagtaaa actcaaatca cgctgtatga
     7381 cggccgttca ggcgaagcat ttgaccgcaa ggttacagtc ggtgtgatgc actatctgaa
     7441 actgcaccac ttggttgacg aaaaaatgca cgcgcgttct accggcccgt acagtctggt
     7501 tactcaacaa cctctgggcg gtaaagctca gtttggcggc caacgtttcg gtgagatgga
     7561 ggtttgggca ttggaagcat acggcgcggc atacacgctg caagagatgc tgactgtgaa
     7621 gtctgacgac gtgaacggcc gtaccaaaat gtacgaaaac atcgtcaaag gcgaacacaa
     7681 aatcgatgcc ggtatgcccg agtccttcaa cgtattggtc aaagagattc gctcactggg
     7741 tttggatatc gatttggaac gctactgata cgggtttcag acggcataag gggagctgtt
     7801 ctgcaggtat gcggggcagc ccgacaatgt ttaaaaacga aatgccgtct gaaagcactg
     7861 tacctttatc catatcgaaa atccgccacg cggtaaaaat atttccttca aggagcagaa
     7921 atgaatttgt tgaacttatt taatccgttg caaaccgcag gtatggaaga agagtttgat
     7981 gccatcaaaa tcggtattgc ctctcccgaa accatccgct catggtctta tggcgaagtt
     8041 aaaaaacctg aaaccatcaa ctaccgtacg ttcaaacccg agcgcgacgg cttgttctgc
     8101 gccaaaatct ttggcccggt caaagactac gaatgcttgt gcggaaaata caaacgattg
     8161 aaatttaaag gcgtaacctg tgaaaaatgt ggcgtagaag ttaccctgtc caaagtgcgc
     8221 cgcgaacgca tgggccatat cgaattggct gcacccgttg cccatatttg gttcttgaaa
     8281 tccctgcctt cccgcttggg tatggtattg aacatgacgt tgcgtgatat cgaacgcgta
     8341 ttgtactttg aagcattcgt ggtgaccgat cccggcatga ctccgttgca acgtcgtcaa
     8401 ttgctgactg aagacgatta ctacaacaaa ctggacgaat acggcgacga cttcgatgcc
     8461 aaaatgggtg cggaaggtat ccgcgaattg ttgcgaacct tggatgtagc aggcgaaatc
     8521 gaaatcctgc gccaagagct tgaatcgacc ggttctgaca ccaaaatcaa aaaaatcgct
     8581 aaacgcttga aagtattgga agccttccat cgttccggta tgaagctgga gtggatgatt
     8641 atggatgtgc tgccggtatt gccgcctgat ttgcgtccgt tggttccgtt ggacggcggc
     8701 cgttttgcca cttccgattt gaacgatttg taccgccgcg tcatcaaccg caacaaccgt
     8761 ctgaaacgcc tgctggaact gcatgcgcct gacatcatcg tccgcaacga aaaacgtatg
     8821 ttgcaagaag cggttgactc gctgttggat aacggccgtc gcggtaaagc catgaccgga
     8881 gccaacaaac gtccgctgaa atcgttggca gatatgatta aaggtaaagg cggccgcttc
     8941 cgtcaaaacc tgttgggcaa acgtgtggac tactccggcc gttccgtgat taccgtaggc
     9001 ccatacctgc gtctgcacca atgcggtttg ccgaaaaaaa tggcgttgga actgttcaaa
     9061 ccatttattt tccacaaatt ggaaaaacaa ggtttggcgt ctaccgttaa agctgcgaaa
     9121 aaattggtag aacaagaagt acctgaagta tgggatatct tggaagaagt catccgcgaa
     9181 catccgatta tgttgaaccg tgcgccgacc ctgcaccgtt tgggtattca agcgttcgag
     9241 cctattctga tcgaaggtaa agcgattcag ttgcacccat tggtgtgtgc cgcatttaat
     9301 gccgactttg acggtgacca aatggcagta cacgttccat tgagcttgga agcgcaaatg
     9361 gaagcacgca cgctgatgct ggcttcaaac aacgtattgt ctcctgccaa cggcgaaccg
     9421 attatcgtac cttcccaaga catcgtattg ggtctgtact acatgacccg cgaccgtatc
     9481 aatgccaaag gcgagggcag cctgtttgcc gatgtgaaag aagtgcatcg tgcataccat
     9541 accaaacagg tcgagctggg tacaaaaata accgtacgtc tgcgcgaatg ggtgaaaaac
     9601 gaagcaggtg agtttgagcc tgtcgttaac cgttacgaaa caaccgtcgg ccgtgcattg
     9661 ttgagcgaaa tcctgccgaa aggcctgccg tttgaatatg tcaacaaagc gttgaagaaa
     9721 aaagaaattt ccaagctgat taacgcatcg ttccgcctgt gcggcttgcg cgatacggtt
     9781 atcttcgccg accacctgat gtacaccggt ttcggatttg cggcaaaagg cggtatttcc
     9841 attgccgttg acgatatgga aattccaaaa gaaaaagcgg ccttgctggc tgaagccaat
     9901 gccgaagtta aagaaatcga agaccaatac cgtcaaggtt tggttaccaa cggcgaacgc
     9961 tacaacaaag tggtggatat ttggggtcgt gccggcgata agattgctaa agcgatgatg
    10021 gacaacctgt ccaaacaaaa agttatcgac cgtgacggca acgaagtcga tcaagagtca
    10081 ttcaactcca tttatatgat ggcggactcc ggtgcccgtg gttctgcggc tcagattaaa
    10141 cagttgtccg gtatgcgcgg tttgatggcg aaacctgacg gatcgattat tgaaacgccg
    10201 attacctcaa acttccgcga aggtctgacc gtattgcaat actttattgc gacccacggt
    10261 gcgcgtaagg gtttggcgga taccgcgttg aaaaccgcga actccggtta cctgacccgt
    10321 cgtctggtag acgtaactca agacttggtc gttgttgaag acgattgcgg tacttcagac
    10381 ggctttgtca tgaaggcagt ggtacaaggc ggtgatgtga ttgaagcatt gcgcgatcgt
    10441 attttgggtc gtgttaccgc gtctgacgtt gtcgatccgt caagcggcga gactttggtt
    10501 gaagccggta cgttgttgac tgaaaaactg gtggatatga ttgaccaatc cggtgtcgat
    10561 gaagtcaaag tccgtactcc gattacttgt aaaacccgcc acggtctgtg cgcgcactgt
    10621 tacggccgcg acttggcgcg cggcaaactg gtcaatgccg gcgaggcagt cggcgtgatt
    10681 gcggctcagt ctattggtga accgggtacc cagttgacca tgcgtacgtt ccacatcggt
    10741 ggtgcggcat cccgtgcggc agcagccagc caagtcgaag ccaaatccaa cggtacggca
    10801 cgtttcagca gccaaatgcg ttatgttgcc aacaacaaag gcgagttggt tgtcatcggc
    10861 cgttcttgcg aagtcgtgat tcacgatgac atcggccgtg aacgcgaacg ccacaaagta
    10921 ccttacggtg ccatcctgct ggtacaagac ggtatggcca ttaaagccgg tcaaaccttg
    10981 gcaacttggg atccgcatac ccgtccgatg attaccgaac atgcaggtat ggtgaaattc
    11041 gagaacatgg aagagggcgt taccgttgca aaacaaaccg atgatgtaac cggtttgtcc
    11101 gctttggtag tgattgacgg taaacgccgt tcctctagtg cttccaaact gctgcgtccg
    11161 actgtgaaac tcttggacga aaacggcgtg gaaatctgta ttcccggtac gtccactccg
    11221 gtttcgatgg cattccccgt tggtgcggtg attaccgtac gcgaaggtca ggaaatcggt
    11281 aaaggcgacg tattggcgcg tattccgcaa gcctcttcca aaacccgcga cattaccggc
    11341 ggtctgccgc gcgttgccga gctgtttgaa gcacgcgtgc cgaaagatgc cggtatgctg
    11401 gcggaaatta ccggtaccgt ttccttcggt aaggagacca aaggcaaaca acgtctgatt
    11461 atcactgacg tggacggtgt agcatacgag actttgattt ccaaagagaa acaaattctg
    11521 gtacatgacg gtcaagtggt aaaccgaggc gaaaccattg tggacggcgc ggtcgatccg
    11581 cacgatattc tgcgtctgca aggtatcgaa gcactggcac gctacattgt ccaagaggtg
    11641 caagaggttt accgcctgca aggtgtgaag atttccgata aacacatcga agtcatcatc
    11701 cgtcaaatgt tgcgccgtgt gaacattgcg gatgccggcg aaaccgggtt tattaccgga
    11761 gagcaggtcg aacgcggcga tgtgatggcg gccaatgaaa aagctttgga agaaggcaaa
    11821 gagccggcac gttacgaaaa catattgctg ggtattacca aagcctccct gtccaccgac
    11881 agcttcattt ctgccgcatc gttccaagaa accacccgtg tgttgaccga agctgccatc
    11941 atgggcaaac aagacgaact gcgcggtctg aaagagaatg tcatcgtcgg tcgcctgatt
    12001 cctgccggta ccggtttgac ttatcaccgc agccgtcatc agcaatggca aggggtagag
    12061 caggagactg ctgaaaccca agtaacggat gaataatctt cggcgcgttc attcaataaa
    12121 aaaccgcaag ccttgagctt gcggtttttc tttgtccgat taaggcaaaa acaagcgttt
    12181 tcgtcatttt gaggcgtgtg gatataagcc cgataagtgt cccatatctt cgtgccgtca
    12241 aattatgcat cgaatagaac gagttaaatc cgaaggttat tgtgttaaat attgcaaaaa
    12301 tactttaaaa atttcgcacg gtggggggta gaattcccag acttaaagct taagtttttt
    12361 taacaaagtt tgggggagtc taaatgaaag tatctcaatc agcaatgaat aaacttgtta
    12421 ttgctgttat tgctgttatt gcttctatgg ggctaacagc gtgcgcgggt ggcggttccg
    12481 attcatctat gtcggttcaa ccaagcgttt cggaacaact gaaagacaat gcaaatgttg
    12541 atgcgaaaga tgaaaaagtt attgaatatc tgaagaaatc atcattaaaa gatgtaccaa
    12601 aagaattgca agccaaagta ttaaaggtta aaggtgatga atatacagga gtgcgaaaac
    12661 aatatgcagg taagctcggt aagggtgaat ctgtcaaggc aatgctattt ctagacggcg
    12721 aagagccgtt tagtaaggaa caacttcaga agatggatgt atatgttaat ggtaaaaaat
    12781 acgaaggtag taaggggggg gaactagatg ttctccccaa aggtttgagt gagcaaaaga
    12841 ttgagtttta cggtgcggat aaagaacaga attatgcgct attaaaaact tgggtttatg
    12901 agcaaccgta ttctgtggtt agaggctatt ttggctacag tcgaaaagac ggtaatccta
    12961 tagaagagga tggacaaaat cctgaagaga ttccttttga cttgtatctg ggcgacatta
    13021 gaggcgtggc aacagatgaa gacaaattac ccaaggctgg gagctttcaa tatgaaggtc
    13081 gggcatttgg cggtaatggg gttttatcca aagaatcgtt agataaccat aatggcgtat
    13141 ttagatacac aattgatttt gatcgtagaa aaggctctgg ctcaattgaa ggaatggaac
    13201 aatatggcaa gatcaaatta gaagaagctg ctattgagag aatcccttat cgagagtccg
    13261 gctccagttt ggggttgaaa gaccgggttt cttatttcgg cgtgaacgaa ggggtggcta
    13321 tgttagagaa ggataatgag attaaaaagt atcatttggg tattttcggc gaagcggcta
    13381 atgaagtagc aggtgctgta agccaagagc ataaacatca agctgttatc ggtttcggcg
    13441 gcgagaagaa atagagaaag cactatttct atttagtgcc gtttgtccgg gcaagatgcc
    13501 gtctgaagtt tcagacggca ttttcttcaa aaaacagtcc gccaaatcga atactgccaa
    13561 gcggcaatgc aatacctcaa aacagcaata atttctttta aaacagttga ttcttactga
    13621 acataaggcc gggcaatacg aaaagaaaaa tggcgttgct gggcatttta tttgaatttg
    13681 ttatgaaatt gatgaaatct aaaaatatct tttttatggg atacctaatc gcttcggcga
    13741 cgtttgccga ggatatcggc gtgcctgtcg aaccgattaa cgtcggtagt cgggctgcga
    13801 tgccgtctga aggggaaagc ctcgccctcc tgccgtttgc agaggatgtg ccgccggttc
    13861 gcgatgcaat gccgtctgaa gttcctaaaa gcgcggcagg cggcgatgtt cgaggcggcc
    13921 gatctatacc gtgagttgtt gtcggaaaga cccgatcttg tttatccccg ttttgatttg
    13981 ggcgtgatgc tgtttgaaga caaacaatat cgtgaggcat tggttcagtt gcaccgggcc
    14041 gaggaggtgt tgccgcccga tatgcggcag cttgcacggg aatatatccg tcaggcggaa
    14101 gcggtgcagg cgtggcatcc ttcgttcaat atgaactatg aacaaacaga taatgtaaac
    14161 aatgcgtccc tttcacggga catcgtcatc aacggccgga aatggataaa atcggaagac
    14221 agcctgccca aacgcgccaa cgggataagg tacgaactgg gcgttgatcg gatgtttaac
    14281 atggcaggca atcactttgc ccgcttaggc atcagcggtt ccggtgtgca ttattggaat
    14341 gcccgggatt ttagcgaaca ggcgtttcat gccgaagtag gctaccgtta tcggaatagc
    14401 cgtctagagt ggggattccg gccctttgtc aaacaaaacc ggctgggcaa taaccgttat
    14461 acggcaaata cgggtattgt gttggattac agccgccgtc tgaatgaaaa atggcgcagc
    14521 acccaatctt tccagtatgg ccgcaaacaa taccatgacg aatatttggc aaaacgttac
    14581 aacagtaaaa cgatttcggt gagcggtacg ttcagctatt acgctatgtc ggcttggcag
    14641 ttgtacgggg gtattagcgg tatgtttgat aatactgtgg agaaagagca ggcttcacgg
    14701 cgttatggtg taagtttggg tacggtgaaa atattagacg gcggtcttgg actgaagttg
    14761 ggtgcgggtt acacgaaacg gatatttaaa gcccctgcaa cattaattta caattttact
    14821 cggcgtgatg attaacatcg gatgagcgcg gctttatggc ataaaaaact gtcgtggaaa
    14881 ggatttacac cccaaataaa tttccgttac aacaagaaca acagcaatat gcccgccttt
    14941 tattcgcaca gcggcaaggg atggtttgtc agtatggaaa aaacgtattg acagtatttt
    15001 ctccagccgt ccgactgatt gtgagggatg tcggtaaata tttatcggca aacaagaaaa
    15061 tcatcttttt tcttgtcgtt atgcttgact gtctgcttgc aataaaaata taattccgct
    15121 cttgccgaca tggtgtcggc aaatatttaa ctcaacagga cgagaaaata tgccaactat
    15181 caaccaattg gtacgcaaag gccgtcaaaa gcccgtgtac gtaaacaaag tgcccgcact
    15241 ggaagcctgc ccgcaaaaac gcggcgtgtg cacccgtgta tacacgacta cccctaaaaa
    15301 acctaactct gcattgcgta aagtatgtaa agtccgcctg accaacggtt ttgaagtcat
    15361 ttcatatatc ggcggtgaag gccacaacct gcaagagcac agcgtcgtac tgattcgcgg
    15421 cggccgtgta aaagacttgc cgggtgtacg ttaccacact gtacgcggtt ctttggatac
    15481 tgcaggtgtt aaagaccgca aacaagcccg ttctaaatac ggtgctaagc gtcctaaata
    15541 attaccggga ctcaaatagg cacgtcggcc gcctaagctg aacaacggcc gagtaagtga
    15601 atactcaatt gggtattcat gggaatagac ccgactgaat agattaaagg aaattaaaat
    15661 gccaagacgt agagaagtcc ccaagcgcga cgtactgcca gatcctaaat tcggtagcgt
    15721 cgagttgacc aaattcatga acgtattgat gattgacggt aaaaaatccg ttgccgagcg
    15781 tatcgtttac ggtgcgttgg aacagattga gaaaaaaacc ggcaaagcag caatcgaagt
    15841 atttaacgaa gccattgcaa actccaaacc tatcgtggaa gtgaaaagcc gccgtgtagg
    15901 tggtgcaaac taccaagttc ctgttgaagt tcgtccttca cgccgtctgg ctttggcaat
    15961 gcgttgggtt cgcgacgcgg cccgcaaacg tggtgagaaa tccatggatc tgcgtttggc
    16021 aggcgagttg attgatgcgt ccgaaggccg tggcggtgcg ttgaaaaaac gtgaagaagt
    16081 acaccgtatg gctgaagcca acaaagcatt ctctcacttc cgtttctaat tttgaaaggc
    16141 taataaaatg gctcgtaaga ccccgatcag cctgtaccgc aacatcggta tttccgccca
    16201 tatcgatgcg ggtaaaacca cgacgacaga acgtattttg ttctataccg gtttgaccca
    16261 caagctgggc gaagtgcatg acggtgcggc tactaccgac tacatggaac aagagcaaga
    16321 gcgcggtatt accattacct ccgctgccgt tacttcctac tggtccggta tggcgaaaca
    16381 attccccgag caccgcttca acatcatcga caccccgggg cacgttgact ttaccgtaga
    16441 ggtagagcgt tctatgcgtg tattggacgg cgcggtaatg gtttactgtg cggtgggcgg
    16501 tgttcaaccg caatctgaaa ccgtatggcg gcaagccaac aaataccaag ttccgcgctt
    16561 ggcgtttgtc aataaaatgg accgccaagg tgccaacttc ttccgcgttg tcgagcaaat
    16621 gaaaacccgt ttgcgcgcaa accccgtacc tatcgtcatt ccggtaggcg cggaagacag
    16681 ttttaccggt gttgtcgatt tgctgaaaat gaaatctatc atctggaatg aagccgataa
    16741 aggtacaacc tttacctatg gcgatattcc tgccgaattg gtcgaaactg ccgaagaatg
    16801 gcgtcaaaat atgattgaag ccgcagccga agccagcgaa gaactgatgg acaaatactt
    16861 gggcggtgaa gatctggccg aagaagaaat cgtaggcgcg ttgcgtcaac gtactttggc
    16921 aggcgaaatt cagcctatgc tgtgcggttc tgcatttaaa aacaaaggtg ttcaacgtat
    16981 gttggacgca gttgtagaat tgctgccagc tcctaccgat attcctccgg ttcaaggtgt
    17041 taatcctaac actgaagaag ccgacagccg tcaagccagc gatgaagaga aattctctgc
    17101 attggcattc aaaatgttga acgacaaata cgtcggtcag ctgaccttta tccgcgttta
    17161 ctcaggcgta gtaaaatccg gcgataccgt actgaattct gtaaaaggca ctcgcgaacg
    17221 tatcggtcgt ttggtgcaaa tgactgccgc agaccgtact gaaatcgaag aagtacgcgc
    17281 tggcgacatc gcagccgcta tcggtctgaa agacgttact accggtgaaa ccttgtgtgc
    17341 ggaaagcgcg ccgattatct tggaacgtat ggaattcccc gagccggtaa tccatattgc
    17401 cgttgagccg aaaaccaaag ccgaccaaga gaaaatgggt atcgccctga accgcttggc
    17461 taaagaagac ccttctttcc gcgttcgtac agacgaagaa tccggtcaaa ccattatttc
    17521 cggtatgggt gagctgcact tggaaattat tgttgaccgt atgaaacgcg aattcggtgt
    17581 ggaagcaaat atcggtgcac ctcaagtggc ttaccgtgaa actatccgca aagccgttaa
    17641 agctgaatac aaacatgcaa aacaatccgg tggtaaaggt caatacggtc acgttgtgat
    17701 tgaaatggaa cctatggaac cgggtggtga aggttacgag tttatcgatg aaattaaagg
    17761 tggtgtgatt cctcgcgaat ttattccgtc tgtcgataaa ggtatccgcg atacgttgcc
    17821 taacggtatc gttgccggct atcctgtagt tgacgtacgt atccgtctgg tattcggttc
    17881 ttaccatgat gtcgactctt cccaattggc atttgaattg gctgcttctc aagcgtttaa
    17941 agaaggtatg cgtcaagcat ctcctgccct gcttgagccg attatggcag ttgaagtgga
    18001 aactccggaa gaatacatgg gcgacgtaat gggcgacttg aaccgccgtc gcggtgttgt
    18061 attgggtatg gatgatgacg gtatcggcgg taaaaaagtc cgtgccgaag tacctctggc
    18121 agaaatgttc ggttactcga ccgacctgcg ttctgcaacc caaggccgcg ctacttactc
    18181 tatggagttc aagaaatatt ctgaagctcc tgcccacata gctgctgctg taactgaagc
    18241 ccgtaaaggc taatcaggca aataggccgt ctgaaaggct gaaatgattt ttcagatggc
    18301 attgttcttt aatcgatctt taatgtaaag gaattagctc atggctaagg aaaaattcga
    18361 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
    18421 cctgactgc
//
LOCUS       DAWXHA010000036        18314 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.036, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000036 DAWXHA010000000
VERSION     DAWXHA010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18314
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.036"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(101..1318)
                     /locus_tag="AABD07_000915"
     CDS             complement(101..1318)
                     /locus_tag="AABD07_000915"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HFB2355477.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLATGEQVTIGLLAMALKDIGVDAKSYTGWQVSL
                     KTDTAHTKARIESIDDEKMRADLAAGKVVIVAGFQGISSEGNISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERKDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFDLG"
     gene            complement(1520..2248)
                     /gene="rph"
                     /locus_tag="AABD07_000916"
     CDS             complement(1520..2248)
                     /gene="rph"
                     /locus_tag="AABD07_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HFB2355478.1"
                     /translation="MPDYIRTSRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SVDENAPPFLHGKNQGWVTAEYGMLPASTALRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPILE
                     AVAAVSAGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEGAPFSLDELG
                     KLVALAQKGIGELLRYQQNALSVA"
     gene            complement(2330..2794)
                     /locus_tag="AABD07_000917"
     CDS             complement(2330..2794)
                     /locus_tag="AABD07_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HFB2355479.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVGNTVKHLLVANKGAREMAQDL
                     VDYADENGAGLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3012..3788
                     /locus_tag="AABD07_000918"
     CDS             3012..3788
                     /locus_tag="AABD07_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HFB2355480.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALTHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERITQINPQCEVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKEKMRVPCVYSTENIMPPQSGAAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIAGKK"
     gene            complement(3829..3963)
                     /locus_tag="AABD07_000919"
                     /pseudo
     CDS             complement(3829..3963)
                     /locus_tag="AABD07_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225074.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine-4-hydroxylase"
     gene            4033..4887
                     /locus_tag="AABD07_000920"
     CDS             4033..4887
                     /locus_tag="AABD07_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HFB2355481.1"
                     /translation="MPPIPALSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVEITGQYLHYIAQMEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAAETKLPEVYIADLMQAWLGILSRAKHTRSHEVIQETLSVRAQMTAILRRLNEHGIC
                     RFHDLFNPEQGAAYVIVNFIALLELAKEGLVGIVQEDGFGEIRISLNHEGAHSDGIFG
                     TRGGRDVF"
     gene            4928..6136
                     /gene="pncB"
                     /locus_tag="AABD07_000921"
     CDS             4928..6136
                     /gene="pncB"
                     /locus_tag="AABD07_000921"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HFB2355482.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNVSTVY
                     PLADIREDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEVGTD
                     DKGRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVYLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIKRSWALHQYFKG
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFGIPEPRTP"
     gene            6228..7946
                     /gene="argS"
                     /locus_tag="AABD07_000922"
     CDS             6228..7946
                     /gene="argS"
                     /locus_tag="AABD07_000922"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HFB2355483.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRHEFLAQNIHAALNDA
                     RFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFTGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDATAPTVLTEPLEKQLAAELLKFENVLQSVAD
                     TAYPHYLAAYLYQAATLFSRFYEACPILKAEGASRNSRLQLAKLTGNTLKQGLDLLGI
                     DVLDVM"
     gene            8470..9888
                     /locus_tag="AABD07_000923"
     CDS             8470..9888
                     /locus_tag="AABD07_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HFB2355484.1"
                     /translation="MNIHALLSKQWTLPPFLPKRLLLSLLILLVPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWPAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAVKTDFRHIAVCAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATRL
                     SEPKSQKILFIVAESWGLPGNPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQKIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIRRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
     gene            9894..10154
                     /locus_tag="AABD07_000924"
     CDS             9894..10154
                     /locus_tag="AABD07_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355485.1"
                     /translation="MPSERTNSLQTAFCRQTDLLKPTFFIISDKLLCKNPKIQNHRKL
                     SKKQKPSAVVPAKAGIQTRKPQKFIGKTETRKQRTEFPPAQE"
     gene            complement(10341..11087)
                     /locus_tag="AABD07_000925"
     CDS             complement(10341..11087)
                     /locus_tag="AABD07_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFB2355486.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAACSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTAALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(11071..11250)
                     /locus_tag="AABD07_000926"
     CDS             complement(11071..11250)
                     /locus_tag="AABD07_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355487.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            complement(11266..11937)
                     /locus_tag="AABD07_000927"
     CDS             complement(11266..11937)
                     /locus_tag="AABD07_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HFB2355488.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYDSEAVRTAVAVLDVLGTAG
                     DVGSDAPVRRRASAKSGHSYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFETDRYQREVAQVSAGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDSVGE
                     WLGIW"
     gene            complement(12006..12677)
                     /gene="rpiA"
                     /locus_tag="AABD07_000928"
     CDS             complement(12006..12677)
                     /gene="rpiA"
                     /locus_tag="AABD07_000928"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HFB2355489.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSGELLARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEAVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(12754..13236)
                     /locus_tag="AABD07_000929"
     CDS             complement(12754..13236)
                     /locus_tag="AABD07_000929"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HFB2355490.1"
                     /translation="MTNIRIGQGYDVHQLIEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(13268..13957)
                     /locus_tag="AABD07_000930"
     CDS             complement(13268..13957)
                     /locus_tag="AABD07_000930"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HFB2355491.1"
                     /translation="MKRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSG
                     LWQAQTPQLFQAGLLHRALAAENLDGITDEASAVEKLGVRPLLIQGDARNLKLTQPQD
                     AYIVRLLLNAV"
     gene            complement(13954..14688)
                     /gene="dnaQ"
                     /locus_tag="AABD07_000931"
     CDS             complement(13954..14688)
                     /gene="dnaQ"
                     /locus_tag="AABD07_000931"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HFB2355492.1"
                     /translation="MMTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEEKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGETEEEEPTAKPVASAEMKLGAKLKVIKADEAELAAHE
                     EYLDGLGEACIWRKEAVPSENGGENA"
     gene            complement(14844..16154)
                     /locus_tag="AABD07_000932"
     CDS             complement(14844..16154)
                     /locus_tag="AABD07_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFB2355493.1"
                     /translation="MDAKKGGLGLVKSRRFGPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGVLPAGQMLNLGALLFILPYFLFSALSGQLGNKFDKAVLARWVKVLEIIIMAV
                     AAYGFYIRSAPLLLLCLFCMGAQSTLFGPLKYAILPDYLDDNELMMGNSLIESGTFVA
                     ILFGQILGTAVAGAPPYIVGILVLLVAVGGTAGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRHNPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFGRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYSVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLAVFLIKRERRFLGAAAIRKKP"
     gene            complement(16144..16329)
                     /gene="ccoS"
                     /locus_tag="AABD07_000933"
     CDS             complement(16144..16329)
                     /gene="ccoS"
                     /locus_tag="AABD07_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HFB2355494.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKEKENDGR"
     gene            complement(16329..16628)
                     /locus_tag="AABD07_000934"
     CDS             complement(16329..16628)
                     /locus_tag="AABD07_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355495.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARLQSGRFAVKLEDGTGN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLIGNM"
     gene            16979..18175
                     /locus_tag="AABD07_000935"
     CDS             16979..18175
                     /locus_tag="AABD07_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFB2355496.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELEAHGLDSRIGAIGHRVVSGGELYNESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETAHFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITDMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
BASE COUNT         4262 a         5416 c         4575 g         4061 t
ORIGIN      
        1 tgttccaaag tcaaaatatg ccgtccgaac gttcgggcgg cagacaaaac ggcactgccc
       61 gataaaggca gtgccgttgt ccgttttaaa ccgtgaaaca tcagcccaaa tcaaaggctt
      121 tatgcaatac cctggttgcc agttccatgt atttttcgtc aatcaatacg gaaactttga
      181 tttcggaggt ggaaatcatt tggatgttga tgccctcttc ggcgagcgtg cggaagattt
      241 tggcggctac gccgacgtgc gaacgcatac ccaaaccgac tgcggagact ttgcacacgg
      301 tgtcgtcgcc gtcgatagaa gctgcgccga tactgtcttt acgttccgac aggatttcca
      361 aagtctgttt gtaatcgccg cgcggtacgg tgaaagaaaa atcggttgtg ccttcgctgc
      421 cgacattttg gataatcata tcgacttcga tgttggcatc tgcgaccgcg cccaaaatct
      481 gataggcgac gccgggctta tcgggcacac cgcgcacgtt gatgcgggct tggtttttat
      541 cgaatgcgat accggttacg gcagctcttt ccatgttgtc gtcctcttca aaggtaatta
      601 aggtgccgtt gccgccgtct tgcaggctgc tcagtacgcg caggcgcact ttgtattttc
      661 cggcgaattc tactgaacgg atttgcaaaa ctttcgaacc gaggctggcc agttcgatca
      721 tttcttcaaa tgtaaccgta tccatacggc gcgcttcggg tacgacgcgg gggtcggtgg
      781 tgtaaacgcc gtctacgtcg gtatagattt ggcattcgtc cgctttgagg gctgcggcaa
      841 gcgcaacggc ggaagtgtcg gaaccgccgc gtcctagcgt ggaaatattg ccttcactgc
      901 tgatgccttg gaagccggca acgatgacga ctttgccggc ggcgaggtcg gcgcgcattt
      961 tttcgtcatc aatgctttct atgcgggctt tggtgtgggc ggtatcggtt ttgagggaga
     1021 cctgccagcc tgtgtagctt ttggcatcca cgccgatatc cttcaatgcc attgccaaaa
     1081 ggccgatggt tacttgttcg ccggtagcta agacgacgtc cagctcgcgc ggatcgggat
     1141 gctcctgcat ttcgtgcgcc aacgcaacca gacggttggt ttcgccgctc atggcggata
     1201 cgacgacgac gatatcgtgt ccttcggcgc gggctttagc gacacgtttg gccacgtttt
     1261 taatgcgctc gggcgagcct acggatgtgc cgccgtattt atgtacgatt aacgccatgt
     1321 ttcatgcttt cttgtgtggg attggtcggg cagcatggtt tgctggaaaa gcggctatta
     1381 ttactatttt ttacatgaag ttcaagaacg gactgcgctt tcccgcctgc cgtttgacag
     1441 cggtcagcga aaaacctgtt ctttcagatt tttgacaaaa tgccgtctga acggttttca
     1501 gacggcatac ggacagtaat taagcaacgg acaacgcatt ttgctgataa cgcagcagtt
     1561 cgcctatgcc tttttgcgcc agtgcaacca gtttgcccaa ctcgtccaaa ctgaatggcg
     1621 cgccttccgc cgttccctgt atttcgatga ttttccccga tgcggtcatg acgatgttca
     1681 catcactgtc gcagccggag tcttcgggat aatccaaatc caaaagcggc acgccgttca
     1741 ctacgcccgc tgatacggcg gcaacagctt cgaggatggg gttttcactc aaaatgccgt
     1801 ctgaaaccag tttgccgacg gcgatttgca gcgcgacaaa cgcaccggta atcgaagccg
     1861 tacgcgtgcc gccgtccgcc tgaatcacat cgcaatcaat caggatttgt cgttcgccga
     1921 gtttttccat atccacgacc gcgcgcagcg aacgcccgat caagcgttgg atttcttgtg
     1981 tgcgtcccga ctgtttgccc gccgaagctt cgcggcgcat acgcaaagcg gttgaggcag
     2041 gcagcatacc gtattccgcc gttacccagc cttggttttt gccgtgcaga aacggtgggg
     2101 cattttcgtc cacggaagcg gtacaaatca ctttggtatt accgcattca ataaggcacg
     2161 aaccgtccgt atgcggcagg aaatgagggg tgattttgat atcgcgcagg ctgtcggcgg
     2221 cgcgtgaggt gcggatataa tcaggcatac tgccctcccg ttaaaaacag ataaattaaa
     2281 aagccttaaa tatgaaaaat cacatttaag gccttcaaac tgaaaatttc tacgcctctt
     2341 cggctttgct acggataatc aaaagcggca ggtggctttg gcgcattacc gtttcggcga
     2401 aactgcccat caaaaggtgc atcagcccgg tgcgcccgtg cgtgcccaac accagcaggc
     2461 cggcaccgtt ttcatcggca taatcgacca aatcctgcgc catttcgcgc gcacccttat
     2521 tggcaaccag caggtgtttg acggtatttc ccacacccag ttcccgggcg gtgcgctcgg
     2581 cggcatccaa aacctcgttg ccttgcgcga cggcggcggc ctcgtaactt tcgtgttgca
     2641 aaaattcggg ggcgagcgcc atatattcgg cagggttggc aacgtgtacc aaagtcagac
     2701 gcgcaccgtt gaccccggca agctcggcgg cgtgtttcag ggcattgatg gacgtttcac
     2761 tgccgtcaac ggcaacgacc agatgtttgt acatatcgta ttctcctttt gcaccgtctc
     2821 acggtgccgt ctcttcaggt ttgcgcaaag gcagtctgcg ccgtttcatt atagacccgc
     2881 cgtcgggctt tatacaacag ccgaacagcc tgactgcttt ccagtataat atgccgcttt
     2941 cgtgcagtca ggcatttttt tgccggcttt cgttcacttt ttgatttgac gcaatcttgc
     3001 aggattcgac catgtccgac aacgctttga cctcttcgcg acgcttcggc ggcatcgcca
     3061 gactctacgg agactctgcc ttgacgcact tttcacaggc acacgtctgc gtggtcggcg
     3121 tgggcggggt cggctcgtgg gcggtcgagg ctttggcgcg cacgggcatc gggcgtttga
     3181 ctttgattga tttggacaac gttgccgaat cgaatgtcaa ccgccagctg cacgccctga
     3241 ccggcgactt cggcaaagca aaagttaccg ccttgcgcga acgtattaca caaatcaatc
     3301 cgcaatgcga agtatttgaa attgaagatt tcgttaccga agacaatttg ccggaatact
     3361 tcggaaaagg ttttgatttc gtcatcgacg cgatcgacca agtgcgcgtc aaagcggcaa
     3421 tggcggctta ttttgtggaa cgcaaacaac cgtttgtcct cagcggcggc gcgggcggac
     3481 agaaaaatcc cgccctgatt caaaccgccg atttaagccg cgtaacccac gacccgctgc
     3541 ttgccaacct gcgctacacc ttgcggaaac gctacggctt cagccgcgat actaaggaaa
     3601 aaatgcgcgt gccgtgcgtg tattcgaccg aaaatatcat gccgccgcaa tcgggcgcag
     3661 cgtgttctgc cgatgccgcg ccgcagggct tgtcatgcgc cggctatggc gcaagtatgc
     3721 tcgttaccgc ttcgttcgga ctgtattgcg cacaggcggc ggtggaacac atcgcgggca
     3781 aaaaataagc aatgccgtct gaaacaggat tcagacggca tttgaacaaa cgcggcaatc
     3841 aagctgtcgg ttcagaaaaa ccaacatcgg cacgcctaaa accgtattca caatctactc
     3901 cttttcaaaa tatttgcatt taaaagccgt tataatgccg tccgaacatc tgcccgacca
     3961 cattatgcgt gaatgccggc agattgtttt cttttgtaaa cttatattaa aattcactta
     4021 ccaattcacg ccatgccgcc catccctgcc ctatccgcac catccgagca cactgtcgca
     4081 tgggtattcg gccaacccgt taccgatttg ccgcaggatt tgtttatccc gcccgacgcg
     4141 ctgaaagtcg tattgggcag ttttcaaggc cctttggatc tgctgctcta ccttatccgc
     4201 aagcagaaca tcgatgttct cgatattccg atggtggaaa ttaccgggca gtatctgcac
     4261 tatattgccc aaatggaagc ctatcagttt gatttggcgg cggaatatct tttgatggcg
     4321 gcaatgctga ttgaaatcaa atcgcgcctg ctgctgccgc gtaccgaagc cgtcgaagac
     4381 gaagaggccg acccgcgtgc cgagttggtg cgccgtctgc ttgcctacga gcaaatgaaa
     4441 ctggcggcgc agggtttgga cgcgctgccg cgtgcgggac gggatttcgc gtgggcttac
     4501 ctgccgctgg aaattgcagc cgagacgaag ctgcccgagg tttacatcgc cgatttgatg
     4561 caggcatggt tgggcattct ttctcgggca aaacatacgc gcagccacga agtaatccaa
     4621 gaaacccttt ccgtgcgcgc gcaaatgacg gcaatcctgc gccgtttgaa cgaacacggg
     4681 atatgcaggt ttcacgacct gttcaatccc gaacagggcg cggcttacgt gatcgtcaac
     4741 ttcatcgccc tgttggagct tgccaaagaa ggattggtcg gaatcgtaca ggaagacggt
     4801 ttcggagaaa tccgaatcag cctcaatcat gagggggcgc attcagacgg cattttcggc
     4861 acacggggcg ggcgcgatgt gttctaatac gccccaagcc gccaccagaa atcgggagac
     4921 acgccatatg accggcatca tacattcgct gctcgacact gacctctaca aattcactat
     4981 gctgcaagta gtcctgcacc agtttccgca gacgcacagc ctttacgaat tccgctgccg
     5041 caacgtctcg accgtctatc cgcttgccga catcagggag gacttggaag ccgaactcga
     5101 cgcgctctgc cggctgcgct tcacccacga cgaactcggc tatctgcgct ccctgcgttt
     5161 catcaaaagc gactttgtcg attatctcga actcttccag ctccaacgcc gctttgtcga
     5221 agtcggcaca gacgataaag gccgtctgaa catccgtatc gaaggcccga tgatacaggc
     5281 gatgtttttt gaaatcttca tcctcgccat tgtcaacgaa ctttacttcc gccggctgga
     5341 aacccctgcc gttatcgaag aaggcgaacg ccggcttcaa gccaaagccg cgcgcctgaa
     5401 agaaatcgcc gccgcacaga atccggacga accgcccttc ctgatttccg acttcggcac
     5461 gcgccgccgc tacaagctcg cgtggcagga acacgtcatc cgcaccctgc tcgaagccgc
     5521 cccaagcatc gtgcgcggca caagcaacgt ttacctcgcc aaaaaactcg gcatcacccc
     5581 catcggcacc atggcgcacg aattcctcca agccttccaa gccctcgacg tgcgcctgcg
     5641 gaatttccaa aaggccgcgc tcgaaagctg ggtgcacgaa taccggggcg atttgggcgt
     5701 tgccctgacc gacgtggtcg gtatggatgc cttcctgcgc gatttcgacc tctatttcgc
     5761 caaactcttc gacgggctgc gccacgacag cggcgaccct tacgtttggg gcgacaaagc
     5821 ctacgcccac tatcaaaagc tcaaaatcga cagccgcacc aaaatgctga ccttctccga
     5881 cgggctggac atcaaacgct cttgggcatt gcaccaatat ttcaaaggcc gcttcaaaac
     5941 cggcttcggc atcggcacca acctcaccaa cgatatgggg catacgccct tgaatatcgt
     6001 gttgaaactg gtcgaatgca acgggcagtc cgtcgccaag ctctccgact cgccgggcaa
     6061 aaccatgacc aacaacagca ccttcctcgc ctacctgcgc caagtgttcg gcatacccga
     6121 acctagaacg ccgtaaaccg gcagaaaaag cgtacaattc ctgtttccgc cgcataaaat
     6181 cttttaaaat accgcctgat ttgaatttaa ccgaaagacc gaacttcatg aacctacatc
     6241 aaaccgtcga acacgaagcc gccgccgcct ttgccgccgc aggcatcgcc ggcagccccg
     6301 ttgtcttgca gccgaccaaa aatgccgaac acggcgattt ccaaatcaac ggcgtgatgg
     6361 gtgcggcgaa aaaagccaaa caaaatccgc gcgaactggc gcaaaaggtc gccgacgcat
     6421 tggcgggcaa cgccgtcatc gaaagcgcgg aagtggccgg acccggcttt atcaacctgc
     6481 gcctgcgcca cgaatttctc gctcaaaaca ttcatgcggc tttgaacgac gcgcgtttcg
     6541 gcgtagcgaa aactgcccaa ccgcaaaccg tcgttatcga ctattcttcg cctaatctgg
     6601 cgaaggaaat gcacgtcggc catctgcgct ccagcatcat tggcgacagc atttcacgcg
     6661 tgttggaatt tacgggcaac accgtcatcc gccaaaacca tgtcggcgac tggggtacgc
     6721 agttcggcat gttggttgct tatttggtcg agcagcagaa agacaatgcc gcgttcgagc
     6781 tggcggattt ggagcagttt taccgcgccg ccaaagtgcg ctttgacgaa gaccctgcct
     6841 ttgccgacac cgcacgcgaa tacgttgtga agctgcaagg cggcgatgaa accgtgttgg
     6901 cgttgtggaa acagtttgtc gatatttcgc tctcgcacgc ccaagccgtt tacgacacgc
     6961 tgggcttgaa gctgcgcccc gaagatgtgg cgggcgaatc gaaatacaac gacgatttgc
     7021 agcccgtagc cgatgatttg gttcaaaaag gcctggcggt tgaggacgac ggcgcgaaag
     7081 tcgtgttctt ggacgagttc aaaaacaaag agggcgaacc tgccgcattt atcgtgcaaa
     7141 aacaaggcgg cggcttcctt tatgcttcca ccgatttggc gtgcctgcgc taccgcatag
     7201 gccgtctgaa agccggccgc ctgctgtacg tcgtcgacca ccgccaagcc ctgcacttcg
     7261 agcaactctt taccacttcc cgcaaagcag gctatctgcc tgaaaatgca aaagccgagt
     7321 ttatcggctt cggcaccatg atgggcaaag acggcaaacc gttcaaaacg cgcagcggcg
     7381 acaccgtaaa actggttgac ctgctgaccg aagccgtcga gcgcgccacc gctttggtga
     7441 aagaaaaaaa tcccgaattg ggcgcggatg aagccgccaa aatcggcaag accgtcggca
     7501 tcggcgcagt caaatacgcc gatttaagca aaaaccgcac cagcgattat gtgttcgact
     7561 gggacgccat gctctcattt gaaggcaaca ccgcccccta cctgcaatac gcctacaccc
     7621 gcgtgcaaag cgtgttccgc aaagccggag aatgggacgc aaccgcaccg accgttttga
     7681 ccgaaccact ggaaaaacag cttgccgccg agcttctgaa atttgaaaac gtgctgcaaa
     7741 gcgtggcgga caccgcgtat ccgcactacc tcgccgccta cctttaccaa gccgccaccc
     7801 tgttcagccg cttctacgaa gcttgcccga ttttgaaagc cgaaggcgca agccgcaaca
     7861 gccgcctgca actggcaaaa cttaccggca acacgctgaa acaaggcttg gatttgctgg
     7921 gcatcgatgt gttggacgta atgtaaacac cgcaccgccc gccatcctca tccgaatctg
     7981 aaaaaagcgg cgcgatacac cgtatccgcc gcctttccca aaatgcgaaa caaacaaacg
     8041 ccaagcaagc aagcaagcaa gcaagcaagc aagcaaaaat tatagcccct ttcctgccgg
     8101 cgcacacact ttccgcgcgg cacatccccc tttttccgcc cctcaaaccc gccttttctt
     8161 caggcagggt ttcagcccgc ctcctttccc tgttttcctt tccccgacac gcgtgcgcgc
     8221 ccctgccgca ccgtgccgcg cttttgcgcc cggacggcat cgttccgcca tctggttttc
     8281 tgttttaaat accgctgttt cagaaagaaa tgcagatgtt tcgacacaca ggacgacata
     8341 taaagtaccg ccctatgtgt cgtcctgatt tggaaggggt tacacccctc ccaaccagat
     8401 aaagtctgat cctgccgccc cgaaggacgg atgtccaagt ggcggggttt caaccgaaaa
     8461 ggaaatacga tgaatattca cgccctgctc tccaaacaat ggacgctgcc gccattcctg
     8521 ccgaaacggc tgctgctgtc cctgctgata ctgctggtcc ccaatgcggt gttttgggtt
     8581 ttggcactgc tgaccgccac cgcccgcccg attgtcaatt tggactacct tcccgccgcg
     8641 ctgctgatcg ccctgccttg gcgtttcgtc aaaattgccg gcgtattggc gttttggccg
     8701 gcggttttgt ttgacgggct gatgatggtg atccaactct tcccttttat ggacctcatc
     8761 ggcgccatca acctcgtccc cttcatcctg accgcccccg ccccttatca gataatgacc
     8821 gggctgttgc tgctgtatat gctggcgatg ccgtttgtgt tgcaaaaagc cgccgtcaaa
     8881 accgacttcc gacacattgc cgtctgtgcc gccgttgtgg cggcagccgg ctatttcacc
     8941 ggccatttga gttactacga ccgggggcgg atggccaata tcttcggcgc aaacaacttc
     9001 tattacgcca aaagtcaggc gatgctctac accgtcagcc agaatgccga ctttattacc
     9061 gccggcctgg tcgaccccgt cttcctcccc ttgggcaatc agcagcgtgc cgccacgcgg
     9121 ctgagtgagc cgaaatctca aaaaatcctc tttatcgtcg ccgaatcttg ggggctgccg
     9181 ggcaatcccg agcttcaaaa cgccactttt gccaaactgc tggcgcaaaa agaccgtttt
     9241 tcggtttggg aaagcggcag ttttcccttc atcggcgcga cggtcgaagg cgaaatgcgc
     9301 gaattgtgcg cctacggcgg tttgcgcggg ttcgcactgc gccgcgcacc cgacgaaaaa
     9361 tttgcccgct gcctccccaa ccgtttgaaa caagaaggtt acgccacctt tgcgatgcac
     9421 ggcgcgggta gttcgcttta cgaccgcttc agctggtatc cgagggcggg ctttcaaaaa
     9481 atcaaaaccg ccgaaaacct gatcggtaaa aaaacctgcg ccattttcgg cggcgtgtgc
     9541 gacagcgagc tgttcggcga agtgtcggca tttttcaaaa aacacgacaa gggactgttt
     9601 tactggatga cgctgaccag ccacgccgac tatcccgaat ccgacatttt caaccacagg
     9661 ctcaaatgca ccgaatacgg cctgcccgcc gaaaccgacc tctgccgcaa tttcagcctg
     9721 cacacccaat tcttcgacca actggcggat ttgatccgac gccccgaaat gaaaggcacg
     9781 gaagtcatca tcgtcggcga ccatccgccg cccgtcggca acctcaatga aaccttccgc
     9841 tacctcaaac agggacacgt cgcctggctg cacttcaaaa tcaaataaca acaatgccgt
     9901 ctgaacgcac caacagcctt cagacggcat tttgcagaca gaccgacctc ctcaagccca
     9961 cttttttcat catctccgat aaattgcttt gtaagaatcc aaaaatccaa aatcacagga
    10021 agttatcaaa aaaacagaaa ccatccgccg tcgttcccgc gaaagcggga atccagaccc
    10081 ggaaaccgca gaaatttatc ggaaaaaccg aaactcgaaa acaacggaca gaattcccgc
    10141 ctgcgcagga atgacggctc atacatcacc caaaaaaaat tgaaaccaaa cagctgggat
    10201 tccctcttgc gtgaggctga cagatgccgt ctgaaagact ttcagacggc atagggcgtt
    10261 ttctctttga atttaaattt tgccacaaaa aagccgcccc aaatgaatac ccgggcagct
    10321 ttttgttgat atgactccaa tcagcggtgt tgcggattgt aacgtttttc caaacgcagg
    10381 aatatccagc ctaagaaagt cgtcatcaac agataaatca gggcggcggt gtaaagcggt
    10441 tcttcataaa ccgaataccg gcccgtaatc gtattctgaa catacgccaa ctccgccaca
    10501 gcaatgaccg acagcagcga gctgtctttc aagagcgtga tgaactcgct cgccaaaggc
    10561 ggcagcatac ggcgcaatgc ctgcggcaga atcacatagc gcatcgcctg cggataggtc
    10621 agtcccaaag aacacgccgc ctccatctgt cctttgtcta tagactggat gcccgcgcgg
    10681 aaaatctcac agatatacgc ccccgagttg gcgatcagtg ccaaagaacc ggcaatcagc
    10741 ggcccgtatc cgcgacgcag cgcgattgcc gcctcgccgc tgaccaaaat gccgtctgaa
    10801 ggatggacga aaaacggaaa ccacacatac gcccaaatca caatctgcac aaacagcggc
    10861 gtaccccgga acagggtaac gtacagcagc gaaaccttac gcaacgccca cgccagcacg
    10921 cgcatcggcg caccggcttt ttccaagtga atcaggcgcg ccaacgccaa caacagaccc
    10981 aataccgaac cgcccgccgt cgccacgacc gtcagcccca aggtcgtcag tgcgccgtaa
    11041 agaaacatcc agcggtattc gtaaataatg tcaaaacgaa aatccataaa ccgtccgtat
    11101 caaaaaccgg cggaactgcc gccgttgcaa aataatccgc cattttaccg taaaaaccgc
    11161 cgcctgaact tttttatcgc ggcagacggc ggttgcgcgt ctccgcaaaa atgcagggcg
    11221 cgcggttttc agacggcatt tgccgttcaa ggccgtgcgg tgtctttacc aaatgcccaa
    11281 ccattcgccc acggaatcca tccaatcctt attgcccccg ccgctcctgc ctgcccggcg
    11341 gtacgcccac ggcgcttgcg gatttttagc tttccacaat cctttgcgtt ccctttccgc
    11401 ctgaatttga gcgtcggcat agtcggcaaa atccgcctta tcctgctgtt ctttagcata
    11461 acttttataa tgccacgccg ccccgtcctg cacctgcatc aggttcaaat cggttttgcc
    11521 ggcggatacc tgcgccactt cgcgctgata gcggtcggtt tcaaacacac gtacactgac
    11581 tttcctaccc tccgccgccg cgcgcaggtt gtcgcgcgaa cgtgtaccgt aagcctgttt
    11641 catctccggt gcgtcgatat acgccatccg aattttatgt ttcgcgccgt cgccgtcgat
    11701 gacgtgaagg gtatcgccgt catagacttt ggacaccgtg cctgtgtagc tgtggccgga
    11761 tttcgccgat gcccgtcggc gaacgggcgc gtcggaaccc acgtcccctg ccgtgccgag
    11821 tacgtcgagt acggcaaccg ccgtccgcac cgcctcactg tcatatcccg tataacccaa
    11881 cgcgcccaaa agcgacaggg cgacgggaag ccatttcatg atttttttaa tctgcatatt
    11941 tttcaaatgc cgatgccgtc tgaacatctc tgaaccggat ttcagacggc atcttaacgt
    12001 caggattacc cttggcaggg atagatgact ttcgcaccct cttccgtccc caaaatcaac
    12061 acatcggcgg catcgcgggc gaatatgccg ttttcgagta cgccggtgat tttgttgatt
    12121 tcatcttcca tcgtcagcgg ctgatcgata ttcaagccgt ggacatcgac gatttggttg
    12181 ccgtaaaacg tggtgtagcc gatacgcagt tcgggctgtc cgcccatggc aagcagtttg
    12241 cgcgaaacaa gggagcgcgc gctttcgacg gcttccacgg gcagtgggaa tttgcccagc
    12301 cgggaaacat atttgctttc gtccgcaatg cagacgaatt tttctgatgc gctggcgacg
    12361 attttttcgt tgaggtgcgc gccgccgccg cccttaatca tttgcagggc gtggttcact
    12421 tcgtccgcac cgtcgatata gaccgccaaa ccggacactt cgttcaggga cacgacggga
    12481 atgtcgtacc gggcaagcag ttcgccggat tttttggagg ttgaaaccgc gcctttgatt
    12541 tttttaccgc ttttgcccaa ggcttcgatg aagaaattga tggtcgaacc ggtaccgatg
    12601 ccgatgtatt cgttttcggg tacgaattcg actgcttttt cggcggcgat gcgcttgagt
    12661 tcgtcttgtg tcgtcatatt tttatccttt gggaaaccgt atcaacaaac agccgccatc
    12721 ttaacatttt tttgcacgtc ctgcccgccg cgttcaaatc cgtaccagca ataccgccgc
    12781 ctgcgcctct atgccttcca tccgcccgag atagccgagt ttttcgttgg ttttgccttt
    12841 gatattgacg cacgaaatat cgatacccaa atcggcggcg atgttggcac gcatttgcgg
    12901 aatgtgcggt gcgagtttgg gtttctgtgc aatcacggtc gtatcgacat tgaccgcctg
    12961 ccaaccctgc gcctgaacgc tttgatacgc cgcacgcaaa aggacgcggc tgtccgcatc
    13021 tttgaactct gcggcggtgt cgggaaaatg gctgccgatg tcgcccaaac ctgccgcacc
    13081 gagcagcgcg tcggtaacgg cgtgcagcag cgcgtcggca tcggaatgcc cgagcagccc
    13141 tttttcaaat gggatttcaa ctccgccaag tatcagcttt ctgccttcga tcaattggtg
    13201 gacatcgtag ccctgtccga tacggatatt cgtcatcgtt tgtgttcctg atgttttgaa
    13261 ttgaatttca gacggcattg agcagcagcc tgacgatgta tgcgtcctgc ggctgcgtca
    13321 gtttcaaatt gcgcgcgtcg ccctgtatca gtagcggacg cacacccagt ttttccacgg
    13381 cggacgcttc atcggtaatg ccgtccaagt tttccgcagc caatgcgcgg tgcagcaaac
    13441 ccgcttgaaa aagctgcggc gtttgcgcct gccaaagccc cgaacggtcg acagttgcac
    13501 tgatttgtcc gctttctgcg cgcttgagcg tatcggcaac gggaactgcc aaaatcccgc
    13561 cttcggcggc gttgcccgcc tgttctatca accgcgtcag agcttcagac ggcaggcagc
    13621 agcgggcggc atcgtgtacc agaatattgt cggtttccgc cgccaaaccg gtttccaaca
    13681 gttttgccac accgttgcgg acagtttcgg cgcgggtctg tccaccgttt ttccacaccc
    13741 gaacctgtgg aaatgccgtc tgaaccttat cggcaaacgt gtcttcgggc gagacgacaa
    13801 cgacggtcaa atcgacggcc tcatgccgtt caaaaatccc aagtacatgt tctaaaacgg
    13861 ttttgcttcc gatttcgaca tattgcttgg gtttgtccgc accgaaacgc accccgatgc
    13921 cggcggcggg aatcagcgcg atatttttgc gtttcatgcg ttttccccgc cgttttcaga
    13981 cggcacggct tccttacgcc aaatacaggc ttcgcccaag ccgtcaagat attcttcgtg
    14041 cgccgccagt tcggcttcat ccgccttaat cactttcagt ttggcaccga gtttcatttc
    14101 ggcagatgca acaggtttgg ctgtcggttc ttcctcctcg gtctccccca tcaagtcgaa
    14161 ttgccgccgc gtcatcgcca gatagacttc gcccaaaagt tcgcagtcga tcaatgcgcc
    14221 gtgcaggacg cgcttgctgc ggtcgacgga aaaacggttg cacagggcat ccagactggc
    14281 tttctgcccg gggaacattt cgcgcgccat cgccagggta tcggtaacgg tgcagccgag
    14341 ttcctcgacg gtcggcagcc ccatccggcg gaactccata ttgaggaagc ccacatcgaa
    14401 tttggcattg tggataatca gttccgcacc gcgcagaaaa tcggcaatct gcctgccgac
    14461 ctctgcaaac ggcggcgcgt ttttctcttc caaaacctgt atcgtcaagc cgtggacgcg
    14521 tgccgcctct tcgggcatat cgcgctcggg gtggacatag aggtgcaggt ttttgtcggt
    14581 catttggcgg ttgaccattt ccagaccggc aaactcgacc agacggtcgc cgccgtcggc
    14641 atacaggccg gtggtttcgg tatcgaggat gatttggcgt gtcatcatat cggtgtcttt
    14701 cttctgtctt cgtaaattga ttatttttta agcaatgtat ttttctgttt tcatttcaat
    14761 gcacaaaccc acttattcac agtgtgttca caacattggg caggcggatt gtgtattttg
    14821 gggacaattt tttcagacgg cattcaaggt tttttcctga ttgccgccgc gcctaaaaac
    14881 cgcctttcgc gcttaatcaa aaataccgcc aacggaatat tgcccaaggc gacaatcaga
    14941 tacagcaggg aaatgctgtc aaacaaaaac agcaataccg cgctcaaaac ggcggcggaa
    15001 accataaaga tgccgttaac gatattgttg gcggcaacgg cgcgggcgcg gaaagtctcg
    15061 ctgctggcgg tttgcagcca ggtatagagc ggaacggaga aaaatccgcc gaaaaagccg
    15121 atcagcgtca tcaccgccat cacggagtat gcccatcctt gcgataaaaa ccaaaaaatg
    15181 ccgttcagcc cttcaaaacg gtgtccgtgc gtcagccaca ccaaaaccag gccgcaaacc
    15241 gtcaaaccca acgcaccaac cgttacccaa gccaacatca gccgttccct gccgaacttg
    15301 gcacacagta ccgaaccggc ggcaataccg atggaaaaca aagcaagcat caggttaaaa
    15361 acattatcgt tgccgcccaa atggatttgg gtaaaggtcg gcagttgcgt ggtataaacc
    15421 gcgccgacaa accaaaacca cgagatgccg ataatggcgg taaaaacggg attgtgccgc
    15481 accgtttcac gcagcaggga ttttgtacca cggacaatat tccactcgat ttgggtatcg
    15541 gcagccttgg cgggtacgga cggcataaac aggctgccgg ccgttcctcc gacggcgacc
    15601 agcaaaacca gtatcccgac aatataaggc ggcgcgccgg caaccgccgt tcccaaaatc
    15661 tgaccaaaca ggatggcgac aaacgtaccg gattcaatca ggctgttgcc catcatcagc
    15721 tcgttgtcgt cgagataatc gggcagaatg gcatatttaa gcgggccgaa cagcgtcgat
    15781 tgcgcgccca tgcaaaacag gcagagcaag agcagcgggg ctgaccggat ataaaacccg
    15841 tatgccgcca ccgccataat gatgatttcc agcaccttga cccaacgcgc caaaacggcc
    15901 ttgtcgaatt tgttacccaa ctgccccgac agcgcggaaa acaggaaata cggcaaaata
    15961 aacagcagtg cgcccaagtt caacatctgt ccggcaggca gaacgccgtt ttgccccaaa
    16021 ccgtaaaacc cgatcatcac aaacagcgcg gttttgaaca cattgtcatt gaacgcgccg
    16081 agaaactgcg tagcgaaaag aggcccgaaa cggcggcttt taaccagtcc caaaccgcct
    16141 tttttagcgt ccatcgtttt ccttctcttt ttcaatcagt ttacttgtcg aatcatcatc
    16201 catcaaaatg cggtgcgccg gtccttccaa atcgtcaaac tgtccgtttt tgcccgacca
    16261 ccagaaaaac cagccgatga caaatgccaa aataatgctg atgggcacca gaataaacat
    16321 actttccatc acatattccc tatcaaatcg ttcaaaacaa aagtctgccc tgacacggtc
    16381 agatattcgt tacgcaaagt tccgacgggg gcttcgtcaa aaaacagctc gatacggtct
    16441 ttgaccacgc gccaatattg gggaatttcc gtctgaccga acggcgacag gacatggttg
    16501 cccgtcccat cttccaattt aacggcaaaa cgcccgctct gcagccgtgc ttccgattcg
    16561 tcgtcggcaa gaaggatgaa aaagcctata tgccgtcccg attggtcatg aatactgaaa
    16621 taatgcataa attccccacc cgcctttttt cagacggcat caactaaaaa cagggcgaat
    16681 gtaccagttt ggacgggaaa aatgcaaaga aattctccct cccccagccg aaaacaccgg
    16741 caaaccgcat atcccccttt tttccgtcaa aatacccgac ttccgccatt ttcacgcaaa
    16801 cgcccgatta agccaagcaa ttgcaaagat tttttgctag aatagcctgc ttcttttatc
    16861 aaccgtttca gacggctcca ctactttccc gtcaaggaaa gcaaagcgga ttcggcacga
    16921 atccgattag tatccgtgtc cgattccaat gccgtctgaa actttccgga gtaagaaaat
    16981 gtcccaaaaa ttgatcttgg ttttgaactg cggcagctcg tccctcaaag gcgcggtcct
    17041 ggataacggc agcggcgaag tcctgctgag ctgccttgcc gaaaaactca acctgcccga
    17101 tgcctacatt acattcaaag taaacggcga aaaacacaaa gtcgatctgt ccgcacaccc
    17161 cgaccacacc ggcgcggtcg aagccctgat ggaagaactc gaagcccacg gcctcgacag
    17221 ccgcatcggc gccatcggcc accgcgtcgt cagcggcggc gaactgtaca acgaatccat
    17281 cctcgttgac gacgaagtca tcgccggcat cgaaaaatgc atcccgctgg ctcctctgca
    17341 caatcccgcc cacctcttgg gcctgcgtgc cgcgcaaagc attttcaaag gcctgcccaa
    17401 cgtcgtcgta ttcgatacct ccttccacca aaccatgccc gaagtcgcct acaaatacgc
    17461 cgttccgcag gagttgtatg aaaaatacgg cctgcgccgc tacggcgcgc acggtaccag
    17521 ctaccgcttc gttgccgacg aaaccgcgca cttcctcggc aaagacaaaa aagacctgcg
    17581 tatggtcatt gcccacttgg gcaacggcgc atccatcacc gccgtcgcca acggagaatc
    17641 gcgcgacacc agtatgggcc tgaccccgct ggaagggctg gtaatgggta cgcgcagcgg
    17701 cgacatcgat ccttccgtat tcggcttcct cgccgaaaac gccaatatga ccattgccca
    17761 aatcaccgac atgctgaaca aaaaatccgg cctgctcggc atttccggcc tgtccaacga
    17821 ctgccgcacc attgaagaag aagccgccaa ggggcataaa ggcgcgaaat tggccttgga
    17881 tatgtttatc taccgccttg ccaaatacat cggcagtatg gcggttgccg caggcggctt
    17941 ggacgcactg gtctttaccg gcggtatcgg cgaaaactcc gacatcatcc gcgaacgcgt
    18001 aatcggctac ttgggcttcc tcggtctgaa catcgaccaa gaagccaacc tgaaagcccg
    18061 cttcggcaac gccggcgtga ttaccactgc cgacagcaaa gccgttgccg tggtcattcc
    18121 gaccaacgaa gagctgatga ttgcccacga taccgcccgt ttgagcggtc tgtaaggttt
    18181 tatcctcacg cgaactgcct ccggaaacgg aggcagtttt tttatagtgg attaaattta
    18241 aaccggtaca gcgttgcctc gccttgccgt actatttgta ctgtctgcgg cttcgtcgcc
    18301 ttgtcctgat tttt
//
LOCUS       DAWXHA010000037        18200 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.037, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000037 DAWXHA010000000
VERSION     DAWXHA010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18200
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.037"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(140..355)
                     /gene="rpmE"
                     /locus_tag="AABD07_000936"
     CDS             complement(140..355)
                     /gene="rpmE"
                     /locus_tag="AABD07_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HFB2355497.1"
                     /translation="MKQGIHPNYREVNVTCSCGNKFVTKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
     gene            594..956
                     /locus_tag="AABD07_000937"
     CDS             594..956
                     /locus_tag="AABD07_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HFB2355498.1"
                     /translation="MGSKFFFLLLRFAGSVLPPSHMRGIGIIGRRVLGFLARRISPHI
                     GRGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMGPECLLYSTNHKFDREKNALRA
                     TRKSVRLRWRTMSGRGAG"
     gene            923..1090
                     /locus_tag="AABD07_000938"
     CDS             923..1090
                     /locus_tag="AABD07_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HFB2355499.1"
                     /translation="MEDDVWPGRRVIVMAGVTVGRGSVVGAGAVITKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(1324..1812)
                     /locus_tag="AABD07_000939"
     CDS             complement(1324..1812)
                     /locus_tag="AABD07_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HFB2355500.1"
                     /translation="MKKILTAAAVALIGILLATVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKVIKTANDYKNKDFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVIYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(1809..2195)
                     /locus_tag="AABD07_000940"
     CDS             complement(1809..2195)
                     /locus_tag="AABD07_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFB2355501.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFLEEARWAFFEKRGLMHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGMRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            complement(2192..2554)
                     /locus_tag="AABD07_000941"
     CDS             complement(2192..2554)
                     /locus_tag="AABD07_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HFB2355502.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            complement(2679..3506)
                     /locus_tag="AABD07_000942"
     CDS             complement(2679..3506)
                     /locus_tag="AABD07_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HFB2355503.1"
                     /translation="MKKTAYAILLLIGFASAPAFAETRPADPYEGYNRAVSKFNDQAD
                     RYIFAPAARGYRKVTPKPVRAGVSNFFNNLRDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGVPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYPPKNIVFHTPAGRWGTTAAAAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAEPAVHEDSVSETQAEAAGEAETQPGTQP"
     gene            complement(3503..3781)
                     /locus_tag="AABD07_000943"
     CDS             complement(3503..3781)
                     /locus_tag="AABD07_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HFB2355504.1"
                     /translation="MHTELKNGTLHIGGDITVKTLTGDAFGRFRQQCRLKETIAVDFG
                     GVKRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            complement(3832..4422)
                     /locus_tag="AABD07_000944"
     CDS             complement(3832..4422)
                     /locus_tag="AABD07_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HFB2355505.1"
                     /translation="MKKSSFISALGIGILSIGMAFASPADAVGQIRQNATQVLTILKS
                     GDAASARPKAEAYAVPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKFKNATVNVKDNPIVNKGGKEIVVRAEVGIPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGTSLVTVYRNQFGEIIKAKGIDGLIAELKAKNGGK"
     gene            complement(4453..4947)
                     /gene="mlaD"
                     /locus_tag="AABD07_000945"
     CDS             complement(4453..4947)
                     /gene="mlaD"
                     /locus_tag="AABD07_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HFB2355506.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNAEGGNAE
                     KAAE"
     gene            complement(4998..5774)
                     /gene="mlaE"
                     /locus_tag="AABD07_000946"
     CDS             complement(4998..5774)
                     /gene="mlaE"
                     /locus_tag="AABD07_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HFB2355507.1"
                     /translation="MNFIRSVGAKTLGLIQPFGSITLFLLNILAKSGTAFARPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCIPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            complement(5822..6622)
                     /locus_tag="AABD07_000947"
     CDS             complement(5822..6622)
                     /locus_tag="AABD07_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFB2355508.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTQLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            6862..7710
                     /locus_tag="AABD07_000948"
                     /pseudo
     CDS             6862..7710
                     /locus_tag="AABD07_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221212.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            7818..9249
                     /gene="aldA"
                     /locus_tag="AABD07_000949"
                     /pseudo
     CDS             7818..9249
                     /gene="aldA"
                     /locus_tag="AABD07_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(9331..10260)
                     /gene="ppk2"
                     /locus_tag="AABD07_000950"
     CDS             complement(9331..10260)
                     /gene="ppk2"
                     /locus_tag="AABD07_000950"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HFB2355509.1"
                     /translation="MTDRQLQPFENVELGEKQDQLQVFEKAVLEHEGKGSAEDSGTAP
                     LPENYPCRKRMLRAAYEAEKAKLQIELLKVQSRVKDSGQRIVSLFEGRDAAGKGGAIK
                     RFMEHLNPRGARVVALEKPTTTERGQWYFQRYIQNLPTAGEMVFFDRSWYNRAGVERV
                     TGFCEPNEYMLFMCQAPELERMLVASGIHLFKFWFSVSREEQLRRFISRRDDALKHWK
                     LSPVDIQSLDRWDDYTEAKNAMFFHTHTGDAPWVIIRSDDKKRARLNCIRYFLHQLDY
                     PGKDVKAIGKVDDKIVLVPDTRYKEKTIDVGHD"
     gene            10431..12305
                     /locus_tag="AABD07_000951"
     CDS             10431..12305
                     /locus_tag="AABD07_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aminodeoxychorismate synthase
                     component I/aminodeoxychorismate lyase"
                     /protein_id="HFB2355510.1"
                     /translation="MPYFALFDDAVSGRAKLYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHSVLFADYEFGLPLMGMESERGGNIALHWFADCADTDAESWLARHSDGIPAGIST
                     PQSSVSETDYLDRIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAV
                     LSHLPDEAGQSAWTLCFSPELFLNIASDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIRAQALPDTSF
                     ADTLRAAFPCGSITGAPKKMSMQIIESLETEARGLYTGSIGYLNPCSGGLGFEGAFNV
                     VIRTLSLKPVSDGIVSGIGGTDSNAQARTAGQGGETPHPFEANPPYRGVYGVGSGIVI
                     DSDPAAEYRECGWKARFLNELRPDFGIFETLRAENRQCALLDRHLCRLKTSAQALNLP
                     LPDGCENQIKQYIADLPDGAFRIKALLASDGISLSHAVLNRLTDKQRVIISPTILPAQ
                     NYLRRFKTTHRAIFDQAWQTAETQGAFDSLFFNSDGILLEGGRSNVFVKHRGQWLTPS
                     LDLDILNGIMRQAVSDEPQKYLHTNQVIETHITQKTLQGAEEIRLSNALRGVFAAVLA
                     "
     gene            complement(12366..13889)
                     /locus_tag="AABD07_000952"
     CDS             complement(12366..13889)
                     /locus_tag="AABD07_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HFB2355511.1"
                     /translation="MYRVCRLCAALCVWGAVGAYAAGLPDVRDDAAALRAQRAAAEGW
                     AGMPPEGDSAANGGSRVIDGDFLLSRPQLLEHVLRDALNGNQADLIASLADLYAKLPD
                     YDAVLYGRARALLAKLAGRPAEAVARYRALHRDNAADERVLLDLAAAEFDDFRLKSAG
                     LHFAEAAKLDLPAPVLENVGRFRKKTEGLTGWHFSGGISPSVNKNANNAAPQYCLQGG
                     GSRICSVTGPVRAAGLDYEAGAEKLTALADNHYLLFRANVGGTSYYFSRKSAYDDAFG
                     RAYLGWQYKNARQTVGVLPFYQAQLSGSDGFDAKTKPPADRRLAPYMLAHGAGVQLAH
                     SYRLSRRSQLSVSLERYRQRYREQGRAERNDGWQDGLYVSLARRLGGSATVFGGWQFA
                     RFVPKRETVGGAVNNAAYRRNAVHIGWAQEWGGTGGLNSRIAASYAHRNYKGIAAFST
                     EAQRNREWNVSLALSHDKLSYKGIVPTLNYRFGKTESNVPYAKRRNSEVFVSADWRF"
     gene            14256..15305
                     /locus_tag="AABD07_000953"
     CDS             14256..15305
                     /locus_tag="AABD07_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein"
                     /protein_id="HFB2355512.1"
                     /translation="MPPPLPPVPGGVAEPHVPVSIPTATPLPAGEVTLSSDNGNIENI
                     NTAGAGSASDAPSRSRRSLDAAPQNTSGISIRQREVEKDYFGYKSKETSFIFKTPGGA
                     QYALSSYADPITVSYSSPDFKIPDRHAGQRLADGSRIFICCSDSGATSYAEITKQDYM
                     KFGAWIGPNGEIDLFAGGFPVGKTPPPAFSYGSSTPETALSKGKITYQVWGIRVRNGQ
                     FVTSSYTPPKSGSYYGTLANTPVLSFITANFNSNTLAGKILGNSDYGPDVDIQNATIT
                     GPTFSGDATSGGKSGKLEGKFFGKFASTRSSEVSIGGKITFDGDRSLDTVFGGVSYEK
                     KLDDTSQDTNHLTKQ"
     gene            15333..17762
                     /locus_tag="AABD07_000954"
     CDS             15333..17762
                     /locus_tag="AABD07_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HFB2355513.1"
                     /translation="MPIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLTNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVEIKNDGYVFDPANPSPSRYLTYKATGVARSQPDPQEWVNKSTLFKLG
                     YNFNDRNRIGWIFEDSRTDRFTNELSNLWTGTTTSAATGDYRHRQDVSYRRRTGVEYK
                     NELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDTNGINGEVYHSFRHIRQNTAQWTA
                     DFEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFAKLYDPKILASNQAKITMLIENRS
                     KYKFAYWNNVFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHA
                     GFSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKTNPELKAEKAKN
                     WELGLAGSGKAGSFKLSGFKTKYRDFIELTYMGVSSDDKNNPRYAPLSDGTALVSSPV
                     WQNQNRTAAWVEGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINALS
                     PWTAVYSLGYDAPSKRWGVNAYAARTAAKKPSDTVHSNDDLNKPWPYAKHSKAYTLFD
                     LSAYLNIGKQVTLRAAAYNITNKQYYTWESLRSVREFGTVNRVNNKTHAGIQRFTSPG
                     RSYNFTIEAKF"
BASE COUNT         4221 a         5262 c         4898 g         3819 t
ORIGIN      
        1 actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactatata
       61 gataagaagt cagtgtgcca aatattaaaa agccctgcca tcgaaatgat ggcagggctt
      121 aattcttgca aagcggcaat cagcgtttga acaggttgcc gaatttgttg ttgaatttgt
      181 ccacgcggcc ggtggtatcg acgatttttt gggtgccggt atagaacggg tggcacaggg
      241 agcaaacctc gatgttgaag ttttcttttt ccattgcgga tttggttacg aatttgttgc
      301 cgcaagagca ggtaacgtta acttcgcggt agttcgggtg aataccttgt ttcatttgat
      361 ttcctttcaa aaaagcgggc ataggggatg tacctatgcc tcagacaagc tcggcattct
      421 cgctattttc tgttgtttcg tcaagaggat attcgataaa atgtatagtg gattaaattt
      481 aaaccagtac agcgttgcct cgccttgccg tactatctgt actgtctgcg gcttcgtcgc
      541 cttgtcctga tttttgttaa tccactataa aaagttcttt tgagggaggt ttgatgggat
      601 caaaattctt tttcctgctg ctgcgttttg ccggttcggt gttgccgccg tcgcatatgc
      661 gcggcatcgg catcatcggc agacgggtgc tcggttttct ggcgcggcgg atttcgccgc
      721 atatcggacg cggggcgtat gtgtttccgg atacggtttt gggcgacggc tcgggcatcg
      781 gggcaaactg tgaaatctgc cgtgggctgg tggtcggcaa aaatgtgatg atggggccgg
      841 aatgcctgct ctattcgacc aaccacaagt ttgaccgtga aaaaaacgct ttgagggcta
      901 cacggaaatc cgtccgatta cgttggagga cgatgtctgg ccggggcgca gggtgattgt
      961 gatggcgggc gtaaccgtcg gacgcggctc ggtcgtgggc gcaggcgcgg tgattacaaa
     1021 agacattccg ccctactctt tggcggcagg caatcctgcg gtggtgaaaa agaatctgcc
     1081 ggaaggttga atgccgcctg aacgtgtcgg ggcggataat ctatagtgga ttaacaaaaa
     1141 tcaggacaag gcggcgggcc gcaggcagta caaatggtac ggaaccggtt cgcttggtgc
     1201 ttgggcgcct tagggaatcg ttccctttga gccggggcgg ggcaacgccg taccggtttt
     1261 tgttaatcca ttataaaaaa caggaacatc gttcctgctt tttttgcgct tcagacggca
     1321 tcgctattgt gccagcgcgg tatcgatttc ttggtagagt ttgccgaaat cgggttctcc
     1381 gacgtaggtt ttgagaattt cgcctttttt gccgataagg acggaagtcg gataaacctg
     1441 tgtgccgaat gcctgtccga cggctttgtc cgcatcataa atgacggtaa acggcagtcc
     1501 gtagtctttg acgtattggc ggacgctttc tatcggatcg atgggctggg caacggcgag
     1561 gacttggaaa tctttatttt tgtagtcgtt tgccgttttg atgactttgg gcatttcgct
     1621 cacacaaccc ggacaggagg gaaaccaaaa attaatcagg gtgactttgc cttgcaggtc
     1681 ggcgttggaa acggtttttc cgtgcaggtc gggcagggag aaggcgggcg cggttttact
     1741 gtcggggatg aggacggtgg caaggaggat gccgatcagt gcgacggcgg cggcggtgag
     1801 tatttttttc attcggacaa ggcttccagt gcgcgggcaa gggtggcggg caggctgacg
     1861 gtgcgttgtg tggcggcgtg gacgggcatc agggtgatgt cggcttctgc ggcggttttg
     1921 ccgtttggca gtgtaatcgt ctgggtcagc acaatgcggc gcatgccggg ggttttcagg
     1981 cggcatgaaa actgcaatac gtcgccttcg acggcgggac ggctgtatcg gatgtcgatg
     2041 cgggcgacaa tcagtatgag gcctgccaac tcgtgcatca gtccgcgttt ttcaaaaaac
     2101 gcccagcgcg cttcctcgag aaattcgagg tagcgtgcat tgttgacatg accgtagccg
     2161 tcgagatggt aattgcggac ggtcagcttc atcagttcag gttgatgggt tggaaggctt
     2221 cgcgggcaag cggttcgtgt tcgaggtcgg tgatgacggt agaaagctgg atgtcgaacc
     2281 attcgttgaa aatgtcggca tcgagtgcgg gccactcgcg ttcgtcttcg caccagtcgg
     2341 caagttcggc ggcgaaaatg tcttcgaaac gggcttcgat ttcgtcccat acttcgtcgg
     2401 cggtttcgca cgggcggaca aggtaggaat tggcatcggc ttggatgtct tcgagggtca
     2461 gtccgtcgag gtggttgccc ggcagggttt gcagccagtt ccaaaaaggt tctaaaggga
     2521 tgaggacgaa tacgctgcgg ttgacttcgt acatggtttt tcctttgctg tcgcgcggta
     2581 tgcgcaaaaa agggattata gcccaatctg tagtgtcgga ctgtccgttc cgacggaagg
     2641 gaatgccgtc cgaacacgga ttttcagacg gcatggcttt agggttgtgt tccaggttgc
     2701 gtttcggctt cccctgctgc ttctgcctgt gtttcggata cggaatcttc gtgaacggcg
     2761 ggctctgccg cgccggtttc ggcactttcg accaattcgt cgatgtcgat gttatcttcc
     2821 gtaccttcgg caggtgttgc accggtctgc cgtgcgcgga ctttcatata gaggtcgcgc
     2881 gtgtagctgt atttgtcgat ggcggcttcg tccagactgt cggtcaaatc gagcaggcct
     2941 tcgcgcgtac tgacggcggc agcggcagtc gtgccccagc gtccggcagg ggtatggaaa
     3001 acgatattct tgggcggata aacagaggta atgcccgtgc cgagcgcgtc gcggacggtg
     3061 gacgggccta agacgggcaa cacgaaataa ttgctgtttt tccagcccca cgaggcaaac
     3121 gtgtcgccca aagtgttttt attgtcggga acgccgcccg cgccggcaat atcaatgagc
     3181 ccgcccaaac cgaaggtggt attgatgccg acgcggacga ggtcttcgct tgcgcgtttg
     3241 atgtccaaac gcaagatatt gctgccgaaa ctgaccacgt cgcgcaggtt gttaaaaaaa
     3301 ttggacacgc cggcgcggac gggtttcggc gtaactttgc ggtagccgcg cgcggcaggg
     3361 gcgaaaatgt agcggtcggc ttggtcgttg aatttggaaa cggcgcggtt gtagccttca
     3421 taagggtcgg cggggcgggt ttctgcaaat gcaggggcgg aagcgaaccc gatcagcagg
     3481 aggatggcgt aggcggtttt tttcatgatt tcagccagtc tttgatttcg tacagttcgg
     3541 acagcgcgcg cacggattcg ggaatgccgg tcagcctgac gctgcctttg cagccgcgca
     3601 gcacttcgag cagcagcgac acgcaggcgg aatcggcacg tttgacacct ccgaaatcga
     3661 cggcaatggt ttctttcaga cggcattgtt gccggaaacg cccaaatgcg tccccggtca
     3721 gggttttgac ggtgatgtcg ccgccgatgt gcagtgttcc gtttttgagt tctgtatgca
     3781 tagcgtttgt tcgaaaaacc cataccgccc tcggacggta tggtttgtcg gttatttgcc
     3841 gccgtttttg gctttcaact cggcaatcag cccgtcgatg cctttggctt tgatgatttc
     3901 gccgaattgg ttgcggtaca cggtaaccag gctcgtgcct tcgatggcga cgttgtaggt
     3961 acggtatttg ccgccgcttt ggtaggtggt aaagtccata ttgacgggct tctgaccggg
     4021 gatgccgact tcggcacgga cgacgatttc cttgccgccc ttattgacga tgggattgtc
     4081 tttgacgttg acggtcgcgt ttttgaattt cagcatcgtg ccggaatagg tgcggatcag
     4141 cagggtttga aattctttgg ccaacgcttg tttttgcgcg tcggacgcgg tacgccaagg
     4201 gttgccgacc gccaatgcgg tcatacgttg gaaatcgaaa tagggaaccg cataggcttc
     4261 ggcttttggg cgtgcagaag ccgcgtcgcc gcttttgagg atggtcaaaa cctgtgtggc
     4321 gttttggcgg atttgtccca ctgcgtcggc cggggaggca aatgccatgc cgatgctcaa
     4381 aataccgatg cccaatgcgc tgatgaagga ggattttttc atgatgtctt tcctgaaaat
     4441 ggatgtgtat gtttattctg cggctttttc cgcattgccg ccctcagcgt ttttctcggc
     4501 gaagctggtc atgaatttac cgatcaggtt ttccagaacc attgcagaac tggttacgga
     4561 gatggtgtcg ccggcagcaa ggttttccgt atcgccgccc tgctgcagcc cgatgtactg
     4621 ttcgcccaaa agtcccgaag tcaggatttg cgcggaaacg tcgctgctga actgatactt
     4681 gccgtccaaa tcaaggcgca ccctcgcctg ataggatttc gggtcaagcc cgatagcgcc
     4741 gacgcgcccg accaatacgc ctgcggattt gacgggggca ttgaccttca aaccgccgat
     4801 gtcgccgaaa tcggcataaa cggcgtaagt tttgtccgaa ccgccgaacg ccgcgccgcc
     4861 cgccacgcgg aaagcgagaa aggcaaccgc cgccgcgccg atcaggacga acagtccgac
     4921 ccaaaattcc aatatgttct ttttcattaa agttccttga atatccgatg ttccgcgttt
     4981 cgtcttcaga cagtctgtca atctgtaaac atccacgcgg tcaatataaa atcgaccgcc
     5041 aaaatcgtca gggcggacga aaccaccgtg cgcgtgctgg cgcgcaaaat gccttccgaa
     5101 gtcgggatgc agtggaagcc ctgatgcacg gcaatcagcg ttaccgccac gccgaacgcg
     5161 gcggatttga tcaaaccgtt gattacatcg taatgtatcg taatgttgtt ctgcatctgc
     5221 ggccagaaaa taccgctgtc caaacccagc cagctcacgc cgaccaaata cgcgccgaaa
     5281 atgcccgcga cgttgaaaat cgaagccaaa agcggcatag aaaacacgcc cgcccaaaaa
     5341 cgcggggcaa ccacgcgggc gacggggttg accgccatca cgttcatcgc ttcgagctgt
     5401 ccggtcgttt tcatcaaacc gatttcgctg gtcatcgcac cgcccgcgct gctggcaaac
     5461 agaatcgccg ccaacacggg acccagttcg cgcaacagag aagccgcgac catatagccc
     5521 aaaatatcgg cggatttgaa tttcgacaac tgcgtatagc cctgcaaacc caaaaccata
     5581 ccgacgaaca gccccgaaac ggcaacaatc agcaccgaca gcacgccggc aaaatacact
     5641 tggcgcacgc tcaggcgcgg acgggcgaaa gccgtgccgg atttcgccaa aatgttcagc
     5701 agaaacagcg tgatactgcc gaagggttga ataaggccga gggttttcgc cccgacggaa
     5761 cggataaaat tcataaattt ctatatgtaa ggttcaacgg tttcagacgg cacctgctca
     5821 tttacccgag caaatcctgc tgcaacgacg tttgcgccgg atagcggtat gccacggggc
     5881 cgtctgccag cccgccgaca aactggcgca cccaaggcga atccagttcg cgcatttcct
     5941 gcggcgagcc ggagaacata atttcgccgt gcgccaagaa aattacctga tcgacgattt
     6001 ccaaagattt ttcaatgtcg tgcgttacca taatgctggt cgaacgcaag gccttgttga
     6061 cgcggctgat caagtgggca atcacgccca aggaaatcgg gtcgaggccg gtaaacggtt
     6121 cgtcgtacaa cataatttcg gggtcgagcg cgattgtgcg tgccagcgcg acgcggcgcg
     6181 acatcccgcc ggacaactcg gacggcatca ggttttccac gccgcgcaga ccgaccgcgt
     6241 tcaatttcaa caaaaccaaa tcgcgaataa ccgcttccgg aagttgcgtc agttcgcgca
     6301 tcggaaaagc gatattgtcg aataccgaca aatcggtaaa cagcgcaccg tgttggaaca
     6361 atacgcccat acggcggcgg tgttcgtaga gttcgtcagc cgaaaaaccc gccaaatccc
     6421 gtccttcaat caaaacctgc ccggactgcg gacgaatctg tcctgtaatc agcctcatca
     6481 gcgtggtttt gccgctgccc gaaccgccca tcacggcggc aaaattgcct tgcggaatgc
     6541 tgaaattgat gtcgttcaga atcgggcggt cgccatacgc gaaggcgacg tctttcattt
     6601 cgataaaggg ggatgggctc atgtacgggc ggacggtagg tttgacggcg tgtattttaa
     6661 ggcttatcgg gaagacgggc aattttcaga cggcatacgg acggcaagtg ttgtgaaaat
     6721 gcctttgtcg gcggcggatt gtttgctgtg gcgaaaaatg ttatctttca aatgataacc
     6781 tttatcagaa aactatggaa aaagcagaac atttgaacag cagccggttc gtcaatctgg
     6841 tcaaaagcgg cggcggctta tgtggagggc agctaccgtt tcgatacttt gtccaacggc
     6901 atttccatcc acggcggtac ggtaacggca cggtgcgatt tttgcagcag ccgcctcgcc
     6961 gaaccttatg tgtcgttcgt gctgttgctg gaagggcgtt tggacttcgg catcaaccgc
     7021 cgccgcttcc gcatcgatgc ggacggcggc aagattgtcc taattgccgt cggggaagaa
     7081 gtcctgttca gccgctatct ttatcgcggc ggcaaaacgg tcaaaatgac cattaaaggt
     7141 atggaacaat ggctgccgcg tccggaatac gcgcgtttcg cacccctgct ttaccgcgaa
     7201 ccggtcagga tatgggattt gcccccaaac ctgcgcggct tggcggcatc ctgcctgcaa
     7261 accgtcccaa aggggcattt gggcgaaaca ttgcgccgcg aggcggacgt gttgcggctg
     7321 ctgtcggatt tgtgggacac ggtttcagac ggcatcgagc cggcggcggg gcaaacggcg
     7381 gaagcagacg ctatgccgtc tgaagacttc agccgcaccc tgaatgccgc gttcgacggc
     7441 ggcgcacacc aagtcaaccg gctgacagcc gcgctgaaca tcagcgaaag gacgctgcaa
     7501 cgccgtatgc gcgaccattt cggcattacg gcaagcgagt ggctgcacca caaacaaatg
     7561 cagcacgcgc tctatctgtt gcaaaacggg ggcaaaaacg tgggcgaaac cgcgtatttg
     7621 tgcggctagc gccacgtttc cagctttatt caggcattca ggcaatattt cggcagcacg
     7681 cctgcggaaa ctaaaaaaga aaaccggtaa gccgtatttg acttgaaacc caaaatccgc
     7741 gtgtaaagaa acttgtacgg caatttattt gggaataaac caaaactaca tccgactaca
     7801 aaactggagg gcccgaaatg aaacaattgg ccatgtacat caacggacgc tttgaaaacg
     7861 atttcaacgg cgaatggcgc gacgtattga acccgtccac cgaagaaacc atcgcccgcg
     7921 aacccaaagg cggcagggcg gacgttgacc gcggcgcgcg cggcgcaacc ggcttgggag
     7981 cgtctgcctg cggtcgaacg cggcgcgtat ttgcgtaaaa tcgcccaagg catacgcgga
     8041 cgcgccgacg agctgaccga caccatcgtt gccgaaggcg gcaaaaccaa agacttggcg
     8101 cgtgtggaag tgatgttcac tgccgactat ctcgattacc aagccgaatg ggcgcgccgt
     8161 tacgaaggcg aaatcatcca aagcgaccgc ccgcgcgaaa acattttatc gttcaaacgt
     8221 ccgctgggcg tgattgccgg cattttgccg cggaacttcc ccttcttcct gatcgcccgc
     8281 aaaatgggcc cggatctggt tacgggcaac accatcgtcg tcaaacccag cagcgtaacc
     8341 ccgatcaact gccacatctt cgccgaaatc atcgatgcgg tcggactgcc cgcaggcgtg
     8401 ttcaacgtgg tggacggtcc gggtgcggaa atcggcaacg ccttgtccgc ccatccgcaa
     8461 gtcgatatgg tcagcctgac cggctcggtt gaagcgggtc gccaagtgat ggaagccgct
     8521 tccgccaaca tcaccaaagt ctcgctggaa ctcggcggca aagcccccgc catcgtgttg
     8581 aaagacgcgg atttggattt agcggtgaaa tccatcttgg cttcgcgcgt cggcaacacc
     8641 ggtcaaatct gcaactgcgc cgagcgcgtc tatgtccaca gcagcctgaa agacgcgttc
     8701 attgaaaaaa tgaccgccgc gatgaaaggc gtgcgctacg gcaaccctgc cgaagccgaa
     8761 gcaggcgcgc cggaaatggg cacgctgatt gaagagcgcg ccgtcaaagc cgttgccgaa
     8821 aaagtggaac gggccgtcaa acaaggtgcg aaattggttt gcggcggcaa acgcaccgaa
     8881 ggacgcggct atttcttcga gcctaccctg ctgaccgaca ccgacaacag tatggacatt
     8941 atgaaagaag aaactttcgg cctcgtgctg cccgtttccg ctttcgacac gctcgaccag
     9001 gtcatcgccc tggcaaacga ctgcgaattc ggtctgacca gctccgtgta caccaccaac
     9061 ctgaacgaag ccttctacgt tacccgccgc ctgcaattcg gcgaaaccta catcaaccgc
     9121 gaaaacttcg aagccatgca gggcttccac gcgggctggg aaaaatccgg catcggcggc
     9181 gcggacggca aacacggttt ggaagaatac ctgcaaaccc aagtcattta tctggaaacc
     9241 gacatctgat gccggtttga cacacggata gaaaatgccg tctgaacctg aaatcgggtt
     9301 cagacggcat ttttattact tcaccggcaa tcagtcatga ccgacatcga tggttttctc
     9361 tttgtaacgc gtatcgggaa caagaacgat tttatcgtcc actttgccga tggctttcac
     9421 gtctttaccc gggtagtcca actggtgcag gaagtagcgg atacagttca aacgggcgcg
     9481 ttttttgtcg tccgaacgga tgatgaccca aggcgcgtcg ccggtgtggg tgtggaagaa
     9541 catcgcgttt ttggcttcgg tgtagtcgtc ccagcggtcg agcgactgga tgtccacggg
     9601 ggaaagtttc cagtgtttca gggcgtcgtc gcggcgggag atgaagcggc gcagttgttc
     9661 ttcgcgggat acggagaacc agaatttgaa caggtggatg ccgctggcga caagcatacg
     9721 ttccaactca ggggcttggc acataaagag catatattcg ttgggttcgc agaagcccgt
     9781 cacgcgttcc acgccggcgc ggttgtacca cgagcggtcg aagaatacca tttcgcccgc
     9841 agtcggcagg ttttggatgt agcgttggaa ataccattgt ccgcgttcgg tagtggttgg
     9901 tttctccaaa gcaaccacgc gcgcgccacg cgggtttaaa tgttccataa agcgtttgat
     9961 ggcgccgccc ttacctgccg catcccggcc ttcaaacagg ctgacgatgc gctggccgga
    10021 gtctttgacc cggctttgca ctttcagcag ctcgatttgc agtttggctt tttcggcttc
    10081 gtaggcggcg cggagcatac gtttgcggca ggggtagttt tcgggcagcg gggctgtgcc
    10141 ggaatcttcg gcagaacctt tgccttcatg ttccaaaaca gctttttcaa atacttggag
    10201 ctggtcttgc ttttcgccca attctacgtt ttcaaacggt tgcaactggc ggtctgtcat
    10261 aaaggtctcc tattgtattt caggttggaa atgaaagtcc gttttcacaa ttttacactt
    10321 tcgccaccgc tttctctaca taaaattaca ttttgttgcc cgaatttgcc ccgccgtctg
    10381 aaaatccgtg taaaaggggc gtataatcaa aacatttgcc ccgaattgcc atgccttatt
    10441 tcgccctgtt tgacgatgcc gtaagcggcc gcgcaaaact ctatcaaaat catgtggaaa
    10501 gccgtttttt ccgtcccgaa gaactcgatg ctttagacgg cgcgctgcaa tcgggatggc
    10561 aaaaagggct gcattcggtg ttgtttgcag actacgaatt cggtttgccg ctgatgggga
    10621 tggaatccga acgcggcggc aacattgccc tgcactggtt tgccgactgc gccgacaccg
    10681 atgccgaaag ctggcttgcc cgacattcag acggcatccc cgccggtatt tccacgccgc
    10741 aatcctccgt atccgaaacc gattacctcg accgcatccg ccaaatccac gaagccatcc
    10801 ggcgcggcga cacctatcaa atcaactaca ccacccgcct gcacctgcaa gcctacggca
    10861 accccgtcag cctctaccgc cgcctgcgcc agcccgtccc ctatgccgta ttgtcccacc
    10921 tgcccgatga agccgggcaa tccgcgtgga cgctgtgttt ctcgcccgaa ctcttcctca
    10981 acatcgcttc agacggcacc atcagcaccg aaccgatgaa aggcaccgcg ccgattttgg
    11041 gcgacggaca agacgaacgc cgcgccgccg agttgcaagc agacccgaaa aaccgcgccg
    11101 aaaacgtgat gattgtcgat ttgctgcgca acgacctcgg caaaatcgcc caaaccggta
    11161 aagtatgcgt acccgagccg tttaaagtat cgcgtttcgg cagcgtctgg cagatgacca
    11221 gcaccatccg ggcgcaagcc ctgccggaca cctcgttcgc cgacaccctc cgcgccgcct
    11281 tcccctgcgg cagcatcacc ggcgcgccca aaaaaatgag tatgcagatt atcgaatcgc
    11341 tcgaaaccga agcgcgcggg ctttatacgg gcagcatcgg ctatttgaac ccgtgttccg
    11401 gcggcttggg gtttgaaggc gcgttcaacg tcgtcatccg caccctgtcg ctcaaacccg
    11461 tttcagacgg cattgtttca ggcatcggcg gcacggattc aaacgcgcaa gcccgaacgg
    11521 caggacaagg cggggaaacg ccgcatccgt ttgaagccaa tccgccgtat cggggcgtgt
    11581 acggtgtcgg ttccggcatc gtcatcgaca gcgaccccgc cgccgaatat cgcgaatgcg
    11641 gctggaaagc ccgattcctc aacgaactgc gccccgattt cggcattttt gaaaccctgc
    11701 gcgcggaaaa caggcaatgc gccctgctcg accgccacct atgccgtctg aaaacctccg
    11761 cccaagccct caacctgccc ctgcccgacg gctgcgaaaa tcaaatcaaa caatacattg
    11821 ccgacttgcc cgacggcgcg ttccgcatca aagccctgct cgcttcagac ggcatcagcc
    11881 tgtcccacgc cgttttaaac cgtctgaccg acaaacagcg cgtcatcatt tcgccgacca
    11941 tcctgcccgc acaaaactac ctgcgccgct tcaaaaccac acaccgcgcc atcttcgacc
    12001 aagcgtggca aaccgccgaa acgcaaggcg cgttcgacag cctgtttttc aattcggacg
    12061 gcatcctact cgaaggcggc aggagcaacg tgttcgtcaa acatcgcgga caatggctca
    12121 cgccctcttt agatttagac attttaaacg gcataatgcg ccaagccgtg tcggacgaac
    12181 cgcaaaaata tttgcacaca aatcaagtga ttgaaacaca catcacacaa aaaacactgc
    12241 aaggagccga agaaatccgc ctctccaacg ccttgcgcgg cgtatttgcc gccgtccttg
    12301 cctgaacgcg caaaaatgcc gtccgaacct gctgccgcaa agttcggacg gcattatccc
    12361 accattcaaa accgccaatc cgccgacaca aacacctcgc tgttgcggcg ttttgcatac
    12421 ggcacattgc tttccgtctt accgaagcgg tagttcaacg tcggcacgat gcctttgtac
    12481 gacaacttgt cgtggctcaa agccagcgag acattccatt cgcggttacg ctgcgcctcc
    12541 gtcgaaaatg ccgcaatgcc tttgtagttg cggtgggcgt aagacgcggc aatccggctg
    12601 ttcaaaccgc ccgtcccgcc ccactcctgc gcccaaccga tatggacggc gttgcggcgg
    12661 taggcggcat tgttgaccgc gccgcccacc gtttcgcgtt tcggcacaaa ccgcgcaaac
    12721 tgccagccgc cgaacacggt tgccgagccg cccaaccgcc ttgccagcga cacataaagc
    12781 ccgtcctgcc aaccgtcgtt gcgttccgcc cggccttgtt cgcggtagcg ttggcggtaa
    12841 cgttccagcg acaccgaaag ctgcgaccgg cggctcaggc ggtaagaatg cgccaactgc
    12901 acacccgccc cgtgcgccag catatacggc gcaagccggc ggtcggcagg cggtttcgtt
    12961 ttcgcatcaa agccgtcgct acccgacaat tgcgcctgat aaaacggcaa aacccccacc
    13021 gtctgccgcg catttttata ctgccagccc aaataagccc tgccgaaagc atcgtcataa
    13081 gccgatttgc ggctgaaata atagcttgtg cccccgacat tggcgcggaa cagcagataa
    13141 tggttgtccg ccagcgcagt cagcttttcc gccccggcct cataatccaa ccctgccgca
    13201 cggacaggtc cggtaacgct gcatatccgg ctgccgccgc cctgcaggca gtattgcggc
    13261 gcggcattgt tggcgttttt gttcacagaa gggctgatgc cgcccgaaaa atgccagccc
    13321 gtcagcccct ccgttttttt ccggaaacgc cccacatttt ccaaaaccgg cgccggcaaa
    13381 tccaattttg ccgcctccgc aaaatgcagc cctgccgact tcagccggaa atcgtcaaac
    13441 tccgccgccg ccaaatccag caaaacccgc tcgtctgccg cattatccct gtgcaacgcc
    13501 cgatagcgcg ccaccgcctc cgccggcctt cccgccaatt tcgccagcaa agcccgcgcc
    13561 ctgccgtaca acaccgcatc ataatccggc agcttggcat acaaatccgc caacgaagcg
    13621 atcaaatccg cctgattgcc gttgagcgcg tcgcgcaaaa cgtgttccaa caactgcggg
    13681 cgcgacagca ggaaatcccc gtcgattacg cgcgaaccgc cgtttgcggc agaatcccct
    13741 tccggcggca ttcccgccca accctccgca gccgcacgct gggcgcgcaa cgccgccgca
    13801 tcgtcccgaa cgtcgggcaa gccggcggca tacgcgccga ccgcacccca aacacacagc
    13861 gcggcacaca gccggcatac ccgatacaca ctatccttca atttgccttc cttaaaaaac
    13921 accgccggac ggcggcggca gaaacgccgc aagccccacg cgcggcggac gcggcgcatc
    13981 atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt acagatagta
    14041 cggcaaggcg aggcaacgcc gtaccggttt ttgttaatcc gctataaaaa acaaaggtag
    14101 aaacgcggca ggcaaacgca ggcacgtccg atttccgcgc cgccccataa aacagttgac
    14161 atcatataac atttaaattg ataatcaaaa ctattattaa tacatcatca agattgagta
    14221 tgcgatgaaa tacaaagccc tgcccttact gccgcttgcc gccgcccttg ccgcctgtgc
    14281 cggggggggt agccgaaccg cacgtccccg tgtccatccc caccgccacg ccgctgcccg
    14341 ccggcgaggt aacgttatca agcgataacg gcaatatcga aaacatcaac accgccggcg
    14401 ccggaagcgc atccgacgcg ccgagccgca gcagacgctc gctcgatgcc gccccgcaaa
    14461 acacatccgg catttccatt cggcagcggg aagtagaaaa agactatttc ggctataaat
    14521 caaaagaaac atcattcatc ttcaaaacac ccggcggcgc gcaatacgcc ctttcatcct
    14581 acgccgaccc cataaccgtc agctactcct cccccgattt caaaattccc gaccgccacg
    14641 cagggcagcg gctcgccgac ggcagccgca tctttatctg ctgcagcgac tccggggcta
    14701 cttcgtatgc ggaaattacc aaacaagatt atatgaaatt cggggcgtgg ataggtccca
    14761 acggcgaaat cgacctcttc gccggcggct tccccgtcgg caaaacgccg cctcctgcgt
    14821 tctcctacgg cagcagcacg cccgaaaccg cattgtcaaa gggtaaaatc acttatcagg
    14881 tttggggcat ccgcgtcaga aacgggcaat ttgttacttc ctcttatacg ccgccgaaaa
    14941 gcggttctta ttatgggaca cttgccaata cccccgtcct ttcctttatc accgccaatt
    15001 tcaacagcaa cacactggca ggcaaaatcc tcggcaacag cgattacggg ccggatgtgg
    15061 atattcaaaa cgcaacgatt accggtccga ccttttccgg cgatgccacg tccggcggga
    15121 aaagcggcaa attggaaggc aagttttttg gcaagttcgc cagcacccgc agcagcgaag
    15181 tcagcatagg cggcaaaatc acctttgacg gcgaccgctc cctcgatacc gtattcggcg
    15241 gtgtgagtta tgaaaaaaaa cttgatgaca ccagtcaaga taccaaccac cttactaaac
    15301 aataaaccac ctcatccctg caaaggtttc ttatgcccat tcccttcaaa cccgtattgg
    15361 ctgccgccgc catcgcccaa gcgtttcccg cctttgcggc agaccccgcg ccgcagtccg
    15421 cccaaacgct gaacgaaatc accgttaccg gcacgcacaa aacccaaaaa ctcggcgaag
    15481 aaaaaatccg ccgcaaaacc ttagacaagc tcttgaccaa cgacgaacac gacctggtgc
    15541 gctacgaccc cggcatttcc gtcgtcgaag gcggcagggc gggttctaac ggctttacca
    15601 tacgcggcgt ggacaaagac cgcgtcgcca tcaacgttga cgggctggcg caggcggaaa
    15661 gccgctcttc cgaagccttc caagaattgt tcggcgcgta cggcaacttc aacgccaacc
    15721 gcaacacttc cgagccggaa aacttttccg aagtaaccat caccaaaggc gcggactcgc
    15781 tcaaatccgg cagcggcgca ttgggcggcg cagtcaatta ccaaaccaaa tccgcaagcg
    15841 actatgtttc cgaagacaag ccctaccatt tggggataaa gggcggcagc gtcggcaaaa
    15901 acagccaaaa attcagcagc attaccgccg ccggcaggct ctttggtttg gatgccttat
    15961 tggtttatac ccgccgcttc ggcaaagaaa ccaaaaaccg ctcgaccgag ggcgatgtcg
    16021 aaattaaaaa cgacggatat gtctttgacc cggccaaccc ctcgcccagc agatacctta
    16081 cctacaaagc cacaggggtt gctcgctccc aacccgaccc gcaagaatgg gtaaacaaaa
    16141 gcaccctgtt caagctgggc tacaatttca acgaccgcaa ccgcatcggc tggatttttg
    16201 aagactcgcg caccgaccgt tttaccaacg agctgtctaa tttgtggacg ggtacgacca
    16261 cgtctgccgc aacgggcgac taccgccacc gccaagacgt gagctaccgc cgccgcaccg
    16321 gcgtcgaata caaaaacgaa ttggaacacg gcccgtggga cagcctcaag ctgcgctacg
    16381 acaagcagcg catcgatatg aacacttgga cttgggacat cccgaaaaat tacgatacaa
    16441 acggcatcaa cggcgaggtt taccattcgt tccggcatat ccgccaaaac accgcgcaat
    16501 ggactgccga ttttgaaaaa caactcgact tttccaaagc cgtttgggcg gcgcaatacg
    16561 gcttaggcgg cggcagaggg gacaatgcca actcggatta cagttatttc gcaaaactgt
    16621 acgaccccaa aatcctcgct tccaaccaag ccaaaatcac gatgctgatc gaaaaccggt
    16681 cgaaatataa atttgcctat tggaacaatg tgtttcactt gggcggcaac gaccgcttcc
    16741 gcctgaatgc gggcatacgc tacgacaaaa acagcagcag cgcgaaagac gatccgaaat
    16801 acaccaccgc catccggggg cagattcccc atttgggttc ggaacgcgcg cacgcgggct
    16861 tcagctacgg cacagggttc gactggcggt ttaccaagca tctgcacttg ttggcaaaat
    16921 acagcaccgg cttccgcgca ccgacttcgg acgaaacctg gctgctgttc ccacaccccg
    16981 atttctacct gaaaaccaat cccgaactga aagcggaaaa agccaaaaac tgggaattgg
    17041 gcctggcggg cagcggcaaa gctggcagct tcaagctttc gggcttcaaa accaaatacc
    17101 gcgactttat cgaattgacg tatatgggcg tttcgtcaga cgataaaaac aaccccagat
    17161 acgccccgct ttcagacggc acggcattgg tcagctcgcc cgtttggcaa aaccaaaacc
    17221 gcaccgccgc ctgggtggaa ggcatagagt ttaacggcac ttggaacctc gacagcatcg
    17281 ggctgcccaa agggctgcac accggcctca acgtcagcta catcaagggc aaggcaacgc
    17341 aaaacaacgg caaagaaacg cccatcaacg cgctttcgcc gtggacggcg gtttacagcc
    17401 tgggctatga cgcgccttcc aaacgctggg gcgtcaacgc ctacgccgcg cgcaccgccg
    17461 ccaaaaagcc gtccgacacc gtccacagca acgacgactt gaacaaaccg tggccttatg
    17521 ccaaacacag caaggcctat acgctgttcg acctttccgc ctacctcaac atcggcaaac
    17581 aggttacgct ccgcgccgcc gcgtacaaca ttaccaacaa gcagtactac acttgggaat
    17641 ctttacgcag cgtccgcgag ttcggcacgg tcaaccgcgt caacaacaaa acccacgccg
    17701 gcatccaacg ctttacctcg ccgggcagga gctacaattt caccatcgaa gcgaagttct
    17761 aagctcctga tgtgccaatg ccgtctgaaa cccgatgatt tgggtttcag acggcatttt
    17821 ttacggtcgc accgccgccc cctttcaggc ttgtaccaag cccaatcccg caactctccg
    17881 tcattcccgc aactctccgt cattcccagg gaagtgggaa tctagaaacg caaagccaca
    17941 ggaacttatc cgaaacaaca gcaacctaaa attcgtcatt cccacgaaag tgggaatcca
    18001 gttcgttgag tttcagttat ttaaaataaa ttttgaaact ttaatcccat cattcccgcg
    18061 aaagcgggaa tccggaacgt aaaatctaaa gaaaccgttt tatccgataa gtttccgtac
    18121 cgacggggct ggattcccgc ctgcgcggga atgacggcgg agcggtttct gttttttccg
    18181 ataaattcct aaaacttaaa
//
LOCUS       DAWXHA010000038        18060 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.038, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000038 DAWXHA010000000
VERSION     DAWXHA010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18060
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.038"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..1257
                     /locus_tag="AABD07_000955"
     CDS             <1..1257
                     /locus_tag="AABD07_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface exposed protein"
                     /protein_id="HFB2355514.1"
                     /translation="PKKYAVALGSSSTASGEYSYASGYNSVASGNKSYAAGYASVASA
                     EGSVVIGDSRQVKPEADQGVAVGSKATVKNKAKQRVAVGSEAKVNAERGIAIGKEAKA
                     GGKTTNTLLDGPAYYADAIAVGYQAEAGKGGAIALGKQAKATKQNGMALGVESEAAGD
                     FSTAVGNESKAKGQGGVGLGNQSKAEADFAVAVGNKAEATKENSLVIGRYARANGNHS
                     VSLGSRSEIKDGVSNSVAPGYGSVASENNVVSVAYKETPQSTELSYRKIVGVDDGVND
                     FDAVNVRQSKAMQGQNMAELFSVRSEVRGVAASSAALSALTPLSYDANNPTQFMVGFG
                     TYKGRQAMALGLSHFVNDRFMVKVGGTLGGNKTGHMMNVGLTWKFGTSQGVPATSDKV
                     LMEQLMQDNRQLKPRLEKLEARLNAM"
     gene            complement(1396..1911)
                     /gene="coaD"
                     /locus_tag="AABD07_000956"
     CDS             complement(1396..1911)
                     /gene="coaD"
                     /locus_tag="AABD07_000956"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HFB2355515.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRNTYTAAERQDMLCAITDNFPNVRIEVFQNRFLVHYAREVDAGFIVRGIRSTSDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMIKGLVGPEGWMETVKRYVPPAVYQ
                     KMIAEHHNNNA"
     gene            complement(2041..2724)
                     /locus_tag="AABD07_000957"
     CDS             complement(2041..2724)
                     /locus_tag="AABD07_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HFB2355516.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSYISAALTLFISLYNIFSSLLN
                     ILLSLNGDD"
     gene            complement(2881..3147)
                     /locus_tag="AABD07_000958"
     CDS             complement(2881..3147)
                     /locus_tag="AABD07_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HFB2355517.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            complement(3221..3691)
                     /gene="rlmH"
                     /locus_tag="AABD07_000959"
     CDS             complement(3221..3691)
                     /gene="rlmH"
                     /locus_tag="AABD07_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HFB2355518.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDAAYAFKEIKPEKRG
                     AGVNAVQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE"
     gene            complement(3744..4130)
                     /gene="rsfS"
                     /locus_tag="AABD07_000960"
     CDS             complement(3744..4130)
                     /gene="rsfS"
                     /locus_tag="AABD07_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HFB2355519.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTIWGGEKPSFHAGMQKPWHAAD"
     gene            complement(4189..4794)
                     /gene="nadD"
                     /locus_tag="AABD07_000961"
     CDS             complement(4189..4794)
                     /gene="nadD"
                     /locus_tag="AABD07_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HFB2355520.1"
                     /translation="MKKIGLFGGTFDPIHNGHFHIARAFADEIGLDAVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVRESATYTFDTVQIFRRQFPSAQLWW
                     LMGSDSLLKLHTWKKWQLLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSVRIL
                     SAPMHNVSSTEIRRNLSAAGVSDGIPPAAARYIRKHGLYEK"
     gene            complement(4791..5390)
                     /locus_tag="AABD07_000962"
     CDS             complement(4791..5390)
                     /locus_tag="AABD07_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HFB2355521.1"
                     /translation="MSELSEILSYNQKFVESGGYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGVDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            complement(5419..6960)
                     /locus_tag="AABD07_000963"
     CDS             complement(5419..6960)
                     /locus_tag="AABD07_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HFB2355522.1"
                     /translation="MDGRRWAVRGAFSLLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFAQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAGASALVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFSVAVLSVCCLFPLSAIVVKAWSAGESRRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRLAWMRGLVFLPFMVSPVCVSAGVLLLYPGWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFAVCIFLLLDNGEGGK
                     RTETL"
     gene            7351..8736
                     /locus_tag="AABD07_000964"
     CDS             7351..8736
                     /locus_tag="AABD07_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HFB2355523.1"
                     /translation="MDGRTQTLSAQTLLGISAAAIILILILIVKFRIRALLTLVIASL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFAPGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASVGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRAIHVPVP
                     ELLSGGTRDSDPPKEPAKAGTVVAVMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KMIGSTPVALLISVLAALLVLGRKRGESGSTLEKTVDGALAPVCPVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLAALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIAFIG
                     FALSALLFAIV"
     gene            8756..9274
                     /locus_tag="AABD07_000965"
     CDS             8756..9274
                     /locus_tag="AABD07_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HFB2355524.1"
                     /translation="MTTHFVVMGVCGCGKTTAAPSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTQQAQNGADHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(9460..10377)
                     /gene="thrB"
                     /locus_tag="AABD07_000966"
     CDS             complement(9460..10377)
                     /gene="thrB"
                     /locus_tag="AABD07_000966"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003778475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HFB2355525.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFVGGYEGVRPLSAGEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(10414..11142)
                     /gene="ubiG"
                     /locus_tag="AABD07_000967"
     CDS             complement(10414..11142)
                     /gene="ubiG"
                     /locus_tag="AABD07_000967"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HFB2355526.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLRGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECVRVEDLAGAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVRPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFISPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            11290..12531
                     /locus_tag="AABD07_000968"
     CDS             11290..12531
                     /locus_tag="AABD07_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749145.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HFB2355527.1"
                     /translation="MSAKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLIVLL
                     YTWFSMLSGGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGIGSAVGGKISLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTF
                     IWATGGLVADAKPSVLFDTQAPAGTGYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWAGTLVALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSMSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGCVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIANIAAQVLSQMELVPVFKG"
     gene            12683..13737
                     /locus_tag="AABD07_000969"
                     /pseudo
     CDS             12683..13737
                     /locus_tag="AABD07_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            complement(13804..15456)
                     /locus_tag="AABD07_000970"
     CDS             complement(13804..15456)
                     /locus_tag="AABD07_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HFB2355528.1"
                     /translation="MVAYAFLFLFVTAVVLLIVRSHYRWTYFFASALFVFLAGGMLML
                     TAQWQRALNFASVWFVVLILFHRLKIHYYKQPLLISDFLLIADWRNWETLFHYKEAVI
                     GMAGLLALAAYAVFGWSGADSLGMPWRWAGAVLFAAAFVSVRHFSKHPGAVKTWLDSL
                     PDDGRDVFLNLPMSCRAVFFQVPVFEGDGEAFARQMPSETQPYGMSDEKPDIVVTLME
                     STLDPHCFDFAAAKIPDLKMFGRQEDTVFSSPLRVHTFGGATWKSEFAFLAGVPSTDF
                     GALASGVFYSVVPHLQTGFVRNLREHGYFCVALSPFTKGNYNAKAAYDHFGFNLMFQP
                     QDLGYPAPMGKNLWHISSEEMMQYARMILEKRHPDLENVRQPMFVYVLTMKEHGPYRT
                     DTDNVFDLDAPDLNAKTVSALNDYIGRIADLDKAVESFDRYLHERGKPFVFGYFGDHQ
                     VPFEGVSVRKKWDYAQPDYVTQFAVRSNIAGGFVQRQDFLDLAFAGGVLMEAAGLEAK
                     DGFMRANMAMRGLCGGGLEDCPNRELVGNYRNYLYDVLKIAR"
     gene            15599..16162
                     /gene="gmhB"
                     /locus_tag="AABD07_000971"
     CDS             15599..16162
                     /gene="gmhB"
                     /locus_tag="AABD07_000971"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HFB2355529.1"
                     /translation="MKLIILDRDGVINRDRDDFVKSVDEWIPVEGSMDAVAFLTQAGC
                     TVAVATNQSGIGRKYFTVQDLTEMHAKMHRLIRQAGGEIDGIWFCPHTGADGCNCRKP
                     KPGMIEDILERFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PGHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            16192..16935
                     /locus_tag="AABD07_000972"
     CDS             16192..16935
                     /locus_tag="AABD07_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HFB2355530.1"
                     /translation="MLIIRNLIYWLILCSSLIFLFPFMLLASPFRDGAHKMARVWVGI
                     LNWSLKHIVGLKYRIIGAEHIPDRPSVICAKHQSGWETLALQEIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVIICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAEMPSETA"
     gene            16932..17621
                     /locus_tag="AABD07_000973"
     CDS             16932..17621
                     /locus_tag="AABD07_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HFB2355531.1"
                     /translation="MTSLIHTLSDGIELTVEINRRAKKNLIIRPIGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRRTLAKTPPHNTANRLPEHIWFHGRQLALTAHQDTQILLMPS
                     EILAPEGAPEKQLALLRDFLERQAHSYLIPRLEHHARATQLFPASSSLTSAKTFWGVC
                     RKTTGIRLNRRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPEAKQRI
                     KIHGRELFALG"
BASE COUNT         4294 a         5460 c         4596 g         3710 t
ORIGIN      
        1 cccaagaaat atgcagtagc attaggatct agttctactg ccagtggaga gtattcctat
       61 gcgtcgggct ataattctgt tgccagtgga aataaatcct atgctgcagg ctatgcttct
      121 gttgccagtg cagaaggcag tgttgtaatt ggcgattcaa ggcaagtaaa accggaagca
      181 gatcaagggg ttgcagtagg ttctaaagca acggtaaaga acaaagctaa acaaagggtt
      241 gcggtaggtt ctgaggcaaa ggtaaatgca gaacgtggta ttgcgattgg taaagaagcc
      301 aaagcagggg gcaaaacaac gaacacactg ttagatggac cggcatatta tgcggacgct
      361 attgccgtcg ggtatcaagc agaggctggc aaaggtggcg ccatcgcttt gggaaaacaa
      421 gcaaaagcaa cgaagcaaaa tggaatggca cttggcgtag aatcagaagc tgccggtgat
      481 tttagtaccg ccgtgggtaa tgaaagcaag gcaaaggggc aaggcggcgt aggtctcggt
      541 aaccaatcta aggcagaggc agattttgcg gtggctgtgg ggaataaggc tgaggcgact
      601 aaggaaaact cacttgtcat tggccgatat gcaagggcaa acggaaatca ttctgtgagt
      661 ttaggatctc gtagtgaaat aaaagatggt gtgagcaatt ctgtggcacc gggttatggt
      721 tcagtagcta gtgagaataa tgtcgtctct gttgcctata aagaaacacc acaatctaca
      781 gaactttcct atagaaaaat tgtaggtgtt gatgatggtg tcaatgattt tgatgccgtc
      841 aatgtacgcc agtcgaaagc gatgcaagga caaaatatgg ctgagctatt ttcagtacgc
      901 agcgaagtgc gtggtgtggc agcgagtagt gcagccctat cggctctgac tccattatcc
      961 tatgatgcaa acaatcctac gcagtttatg gtcggtttcg gcacatacaa aggacgtcaa
     1021 gctatggcat taggattgtc ccatttcgtc aatgaccgct ttatggtaaa agtaggcgga
     1081 accttaggcg gcaataagac gggacatatg atgaatgtag gcttgacttg gaaatttgga
     1141 acgagccaag gtgttccggc tacaagtgat aaggtgctta tggaacagtt gatgcaagat
     1201 aatcgtcaat taaagccacg attggagaaa ttagaagcac gtctgaatgc tatgtagcct
     1261 tgtggcgata acggtttatt gagtatatcg ccaatgataa agtgcataat tttcaaaccg
     1321 ttgataatat acaataaatt gtaaccaata cctcaaacgg gtttgaaccc gaatatgcct
     1381 gacaggaact ttctgtcagg cattgttgtt gtgatgttct gcaatcattt tttggtacac
     1441 ggccggcggc acatatcttt tgacggtttc catccagccc tcgggcccga ccagtccttt
     1501 gatcatagtg gacgacactt cggcgatttc gcgcggcggc atgaggaata cggtagatat
     1561 ttcgggtgcg aggtcgctgt tgatatggcg catggagcgt tcgtattcat aatcggaggt
     1621 ggaacggatg ccgcgcacga tgaatcccgc atctacctca cgggcgtaat gcaccaaaaa
     1681 ccggttttga aacacttcaa ttctgacgtt tgggaagttg tcggtaatgg cgcacaacat
     1741 atcctgcctt tcagcggcgg tataggtgtt gcgtttgtcg ggattgatgc cgatggcgac
     1801 gatgagttcg tcaaacatag attgcgcctg ccgtatcatc cacagatgcc ccaatgtggg
     1861 cggatcgaaa ctgccggcat aaacggcgcg gcgcggtgta ttcggtaaca tttgattcct
     1921 cccggcttca tagccggctg tgtttttatg tgtttgcatc cgtattgtat gcccaaaaca
     1981 aaatgccgtc tgaaaataag tgctttcaga cggcatggtt tgcatggtgt ttcgcctaca
     2041 tcagtcgtcg ccgtttaagg acagcaggat gttgagcagg ctgctgaaga tgttgtaaag
     2101 cgagataaac agtgtcagtg ccgcgctgat gtaactgtct tcgccgccgt cgatgacggt
     2161 gcgtacctgc cacataatca ttaaggaact gaacaagaca aaaccggcgg aaatggtcag
     2221 ggcgagtgcg ggaataccca aaaacagatt ggcaaccacg gcgaccatca gaatgaccgc
     2281 acctacggtc aggaagcgtc cgagcgcgtt catatcgagc cgggttcggc gtgccaatgc
     2341 ggacatcgtt aaaaagacgg cggcggtcat cgcggcggca atgccgacga ttttcgcacc
     2401 gtcggcaata tggagtgcgt attgcagcac ggggccgatc aatacgccca taccgaatgt
     2461 gaataccatc agcagggtaa cgccggtatt gctgtaacgg tttttttcga tgaagtggat
     2521 cataccgtag aaaaacgcca atacgacggc aaatcctatc cagcgcgaac cgaaggcggc
     2581 gtaaaaattg aaaccggcat tggcggcaag tgccgcgcct gcggctgccg gaatgaatga
     2641 aaatccgagc aggcggtagg ttttctgcag gacggtgttt ttagaaaccg tatgcgcggt
     2701 gtagtcgtaa acgtcgtgtt gcatatcatc tgctcctgaa agcgcggttg gaaataacgg
     2761 gggattttaa cattgcccaa tgtcaaaatt tgtccggttg cgtgaagata aagttgtccg
     2821 gcgtatttta aaggccgtct gaagcagttt cggacagcct gtgttcaaaa cggaaaaccg
     2881 ttattgcgga acgtatccct gcacggcatc cgcgccgtcg ccgaagaaat actgctccat
     2941 ctgctgagcc aggtattcgc gcgcgcgcgg atcggcaagg cttaagcggt tttcgttaat
     3001 cagcatggtt tggtggcgcg tccacgccgc ccatgcttct tgcgatacgt tttcaaaaat
     3061 gcgtttgccc aattcgttgg gcagcggcgg aaatttcatg ccttcggctt ctttgttgag
     3121 cttgacgcag aataccattc gtgccatagc ggattccttt gctgtgttca gaaataacgg
     3181 ggcgatttta accgattagg gggtacagac aaaagccttt ttattcccga tgataaggat
     3241 ggttgtgcag gatggaaacg gcccggtaga gctgctcggt cagaaggacg cgcaccatgc
     3301 cgtgcggcag ggtgaggctg gacaggcgca tcatcatgcg ggcttgttgt ttgaggcggt
     3361 cggtcatgcc gtccgcgccg ccgatgacga agcagacgtg ttcgccgttt tgccgccagc
     3421 ttttgaggtg ttccgccagc tcgacggagg tcggtgcttt gccgcgttcg tcaagaacga
     3481 cgaggaacgc gccttgcgga atggcttcaa ggatgcgttt ttcttccgcc gccatacctt
     3541 ggacggcatt cacgcccgcg ccgcgttttt cgggtttgat ttctttgaat gcgtaggcgg
     3601 cgtcgcgtcc gaagcgtttg gcgtattcgg cgacggcctc atcaacccaa cgcggcattt
     3661 tggtgccgac tgccaagacg gtaatgttca atgctttccc ccttacagga aatgccgtat
     3721 gaatattcag acggtatcgg gaatcagtct gcagcgtgcc acggcttctg cattccggcg
     3781 tggaaactcg gtttctcgcc gccccagatg gtgtcaatgt cgtagaagtc gcgcacggca
     3841 gggagcatga cgtggacgac gaggtctcct gcatcaacca acgtccattc gccgctgtct
     3901 ccttcggtac tgaggatttc aaaaccggct tctttcaaat cgacggcaac gttgttggcc
     3961 agtgctttga cttggcgcgt actgtcgccg ctggcgataa tcattctggc aaacagcgaa
     4021 gttttgtctt gcgtttcgag aacggaaatg tctttggctt tgatgtcttc gagggcattg
     4081 acggcgaccc cgaccatttt ttgcaggtct tgcagttctt gttcgttcat tgttttccta
     4141 acgggatgtt ttcagacggc attatagcct ctccttactg atttgacttt atttttcata
     4201 caaaccgtgt tttcggatat aacgggcggc ggcaggcggg atgccgtctg aaacaccggc
     4261 ggcactcagg ttgcggcgga tttccgttga cgacacatta tgcatcgggg ctgacaagat
     4321 gcggacgctg ccgtcctgaa gggcattgcc cagccacgcg tgcagttcgc gcggggtttg
     4381 gtgcaggctg tcgccctgcc gcatggcgac ggcgatattg gtttcgcgca cgagcaactg
     4441 ccattttttc caagtatgca gcttcagcag gctgtcgctg cccatcagcc accaaagttg
     4501 cgcggacggg aactgccggc ggaagatttg gacggtatca aaagtatagg ttgcactttc
     4561 tcggacgatg tcgcagtcgc tgacggcaaa acgcgcgtct tctgccgtcg ccagttcgac
     4621 catggcaagg cggtcggcgg cggaagcgga ggcggcgtct ttgtgatacg ggccgcctgc
     4681 cggcaggaaa acaaccgcgt ccaacccgat ttcgtcggca aaggcacggg cgatatgaaa
     4741 atgcccgttg tgtatcgggt cgaaagtgcc gccgaacagt ccgattttct tcatgatgtt
     4801 tccattcctt ccgataagtc catgccgtct gaaacactgc cgtccacaac cagcgtcagt
     4861 ttgccggtaa cgggatggat gaccagtccg tgaacggcga tatggcgcgg catcagcgga
     4921 tggttgcgga taaggtccac cgtgtggcgc acgctgtctt cgacgttgtc gaaaccggtc
     4981 agccagccgt cgaggtcgac acctgcataa cgcagggttt cgatacggtc ttcgggaatc
     5041 cggctttccc ggacgcgccc gaggaattct tcggcattca gcccctgcat accgcaatcg
     5101 tgatgggcga tgaccataat ctctctgacc ttcaattcaa acacggcaac caaaaggctc
     5161 cgcatcaccg aaccccacgg gtgcgtaacc agcgcgccgg catttttaat cagcttggca
     5221 tcgccgtttt tcaaacccaa cgcgtcgggc agcagcccga taatccgcgc atccatacag
     5281 gacaaaaccg ccagcccgcg ttcggggtat ttgtcggtaa agtatttttc atatcctccc
     5341 gactcgacaa acttctgatt ataggaaagg atttcgctca actcgctcat tttgccgtcc
     5401 tctgaaaaag ggttcgcatt ataacgtttc cgtccgtttt ccgccttcgc cgttgtccaa
     5461 cagcaggaaa atgcacaccg caaatgccga caacagcaat gtcaacacca ttgcccgcgc
     5521 ataattgtcc tcacccgcac gccccaaata ggcataaatc aaagtcgtca acgtctgcca
     5581 ttccggacgc gacaggaaca aggttgccgc aaattcgccc acacacgtcg ccgccgccaa
     5641 agtcagaccg cgccgcaacg ccggtttcaa gagggggaac gtgatacggc atgccgtctg
     5701 aaagccgttt gcgcccaaac ctgccgccgc cctgccgtaa tccggcggca gtgcatccca
     5761 ggccgataaa acatcttttg ccacaaacgg atacgccagc agcgcataca tcgccagcag
     5821 cagcggtaac gaagccgtcc accccggata aagcagcagc acgcccgccg aaacacaaac
     5881 cggcgacacc ataaacggta aaaacaccag tccgcgcatc cacgccagcc gccgcgccgc
     5941 cgccgcatac accacaccca aaaccgccgc cgcaaacacc gccgccgccg aaaagcgcaa
     6001 agtattccac actgcctgcc acgtttcact ttccattaac acacgccgcg attcgccggc
     6061 cgaccacgct ttcacaacaa ttgccgacaa aggaaacagg cagcacacgg acaacaccgc
     6121 caccgaaaat gccagcaata catattcccc caccgattgc ggcggcgacg gcatcacggg
     6181 ggaaaccgcc ttatccgaaa ccgcgcgcct gccgaaccac gcatacagca accctgccgc
     6241 cgccgttacc cccaacacca gccacaccag cgccgaagcc cccgccatat cgagttcgaa
     6301 cataaccaac tggtaaattt ccacttcgac cgtggcataa cggctgccgc ccaacagcaa
     6361 tgccagcccg aaccccgaaa aacaatacag gaagacaagg cacacgccgc cggcaagcca
     6421 cgggcgcaaa acgggcattt caatgtccca aaaccgccgc cacgcccccg cgcccaacgt
     6481 ccgtgccgtc tgaagccgtg ccgcaggcac ttgagcaaac ccctgatacg ccgccctgac
     6541 caacacgggc aggttgaaaa acacattgcc gtacaacaac agatacggcg tatcctgccg
     6601 gccgcgccac aacagcccgt ccgccccgaa cagagccagc acgcccacgc ccgccaccag
     6661 cgtcggcatc acaaacggca gcatcagcag gcgcagcacc aaagcccgcc ccgggaacgc
     6721 cagccgcgcc agcacccacg cgacaggcac gcccaaaggc agcaccagca cacaggttgc
     6781 cgccgcctga aacaccgtcc acgccaaacg tttgagcata taggcatccg acagcaccgc
     6841 gcgccacgcc aaaccgtcat acgccgccac cgcccacaaa ggcgcaacga ccattaccgc
     6901 caaaaaagcc gaaggcagca gggaaaaagc accccgtacc gcccaacgcc gtccatccat
     6961 cgccttcccc acttgaaaca ctgatgttgc gattgtaccc aaaagcccca cataccgtat
     7021 atttcaatcc gactacgtac cgtatccgcc ttcctcccgc cgtctgaaat atagcggatt
     7081 aacaaaaatc aggacaaggc ggcggaccgc aggcagtaca aatagtacgg aaccggttcg
     7141 cccggtgctt cagcacctta gggaaccgtt ccctttgagc taaggcgggg caacgccgta
     7201 ccggtttttg ttaatccact ataaatcgtt caaataaaca ggaatataac ttcagacaaa
     7261 caacttaccg cccgatttgt gctatcgttt tcgcacaact taaaaaaacc tgacaatttt
     7321 gtacttttat tacagagaaa ggctttacaa atggacggcc ggacacagac gctgtccgcg
     7381 caaaccctgt tgggcatttc ggcggcggca atcatcctca ttctgatttt aatcgtcaaa
     7441 ttccgcatcc gcgcgctgct gacactggtc atcgccagcc tgctgacggc tttggcaacc
     7501 ggtttgccca caggcagcat cgtcaacgac gtactggtca aaaacttcgg cggcacgctc
     7561 ggcggcgtgg cgcttctggt cggtctgggc gcaatgctcg gacgtttggt agaaacatcc
     7621 ggcggcgcac agtcgctggc ggacgcgctg atccggatgt tcggcgaaaa acgcgcaccg
     7681 ttcgcgccgg gcgttgcctc gctgattttc ggcttcccga ttttcttcga tgccggactg
     7741 atcgtcatgc tgcccatcgt attcgccacc gcacggcgca tgaaacagga cgtactgccc
     7801 ttcgcgcttg cctccgtcgg cgcattttcc gtcatgcacg tcttcctgcc gccccatccg
     7861 ggcccgattg ccgcttccga attttacggc gcgaacatcg gccaggtttt gattttgggt
     7921 ctgccgaccg ccttcatcac atggtatttc agcggctata tgctcggcaa agtgttgggg
     7981 cgcgccatcc atgttcccgt tcccgaactg ctcagcggcg gcacgcgaga cagcgacccg
     8041 ccgaaagaac ctgccaaagc aggaacggtc gtcgccgtca tgctgattcc catgctgctg
     8101 attttcctga ataccggcgt atcggccctc atcagcgaaa aactcgtgag cgcggacgaa
     8161 acctgggttc agacggcaaa aatgatcggt tcgacacctg tcgcccttct gatttccgta
     8221 ttggccgcac tgttggtctt gggacgcaaa cgcggcgaaa gcggcagcac gttggaaaaa
     8281 accgtggacg gcgcactcgc ccccgtctgt cccgtgattc tgattaccgg cgcgggcggt
     8341 atgttcggcg gcgttttgcg cgcttccggc atcggcaagg cactcgccga cagcatggcg
     8401 gatttgggca ttcccgtcct tttgggctgc ttccttgccg ccttggcact gcgtatcgcg
     8461 caaggttcgg caaccgtcgc cctgaccaca gccgccgcgc tgatggctcc tgccgttgcc
     8521 gccgccggct ttaccgactg gcagctcgcc tgtatcgtat tggcaacggc ggcgggttcg
     8581 gtcggttgca gccacttcaa cgactccggc ttctggctgg tcggccgcct cttggatatg
     8641 gacgtaccga ccacgctgaa aacctggacg gtcaaccaaa ccctcatcgc attcatcggc
     8701 tttgccttgt ccgcactgct gtttgccatc gtctgacaga cggaaaggat agtaaatgac
     8761 tacgcatttt gtcgttatgg gcgtatgcgg ctgcggcaag accaccgccg cgccgtccct
     8821 gcagaaacac ctcggtcaat gtccctatgc cgaaggcgac gagttccaca cccaagccaa
     8881 ccgcgacaag atgggcgcgg gtattccgct gaccgatgaa gaccgctatc cgtggttggg
     8941 caatctgcgc gactggatga cgcaacaggc gcaaaacggc gcggaccaca ccatcgtaac
     9001 ctgttccgcc ctcaaacgcg gctaccgcga cattctgcgc ggagccgaag gcaaagccgc
     9061 cttcatccac ctcagtccgc cgcaagacat caacctcgaa cgcatgatgt cgcgcaaagg
     9121 gcactacatg aaagcaggga tgctcgattc gcaactggaa atcctcgagg aactgggcga
     9181 aggcgaatac ggggtcaaaa tcgccaaccc cggcacgccc gaagcggtcg aagccgatat
     9241 tctgaactgg gttgcctcgg aaaacctgct ttgaagcaat atgccgtctg aagcccggca
     9301 caggatgggt ttcagacggc ataaacatcg ggaacagaat gaattacatt gatttaaaat
     9361 ggaaaatacc cggctatcgt ctcattttcg ttttaatcag ccataaaaat gccgtccgaa
     9421 accctttcag acggcatttc tgtcaaacgc cggacgcact caatccaaac tcaacagcag
     9481 gttgcggaac gcgttcgggt ctttgataaa cgtcatctcg cccgcctgcg gaaaatgaaa
     9541 atccaacagg cgcgacaccc aaaaacggat gcagccggcg cgttgggcgg tcgggaaata
     9601 cgccttttct ccggcactca aggggcgcac gccctcataa ccgccgacaa acgccttttt
     9661 caacgcctca tccaacttat tgtccgccgt ccttgcccaa tcgttgaccg caatcgccaa
     9721 gtcatacata aaattgcccc ggcaggcata atagaaatcg atgaagcccg atacctgacc
     9781 gccgtcaagc aacacattgt ctttaaacag gtcggcgtgg atgatgcccg aaggcagatg
     9841 gttgccgaga ttgtccttca gcgcatcgat ttcggaacac agcagcgcgg catcgtcttg
     9901 cgacaggacg ggcagcagcc gggcgcacgc ttccgtccac cacgcatcgt aacgcgggtt
     9961 ttccatttcc aaagggaaat cggcggcggc aaggtgcatt ttcgccaaca tcgcaccggt
    10021 atggaaacac tgctcagccg tcggcagcgc ggtatccgaa cctttcaggc aggcaaccag
    10081 gcaggccggc ttgcccgcca aaacggaatc gagccggccg tctttgcgcg caaccggcgc
    10141 ggcaaccgcc acgcccttca tactcaaatg ccggttaagc tccagaaaaa acggcagctc
    10201 ttcctgtttc aacacttcaa acacggtcag cacataacgt cccgaagtcg tcgtcagaaa
    10261 ataattgctg ttggtaatcc cctgcgcaat gccctgcagg gaaacaaatt cccccaaatc
    10321 gtaaccgctc aggaagccgc gcatttcatc atcggaaaca ctggtataga cagacatatc
    10381 aactcacttg ctcaaaaacg ggcaaacccg ccgtcagaac gccggacggc aggcaaacat
    10441 ataattcaca tcggtcgaat cgcacagggc ataagtttgc gacaacacat ggtaagtcat
    10501 acccttcgta tccgccacat ccaagcccgc ctgacggcac atccgcgcca gctcggcagg
    10561 cgagatgaat tttttccagt cgtgcgtgcc tttggggaca aacttcaaca gatattccgc
    10621 cgccacaatc agatgcaggt acgatttcgg gtttttattg atggtggaaa aaaacaccat
    10681 gccgtccggc ctgaccagct tggcacaggc acgcacgatg gcggcgggat cggggacgtg
    10741 ttccatcatt tccatgcacg ttaccacatc gaacgagtgc ggttccgccc cggcaaggtc
    10801 ttccacgcgg acacattcgt attcgatatc ggcgacattg ttcaaagccg cgtgcaggcg
    10861 ggcggtttcc aacgactgct ccgccatgtc gatacctttg acaaacgccg cgccgcgccg
    10921 cgccatgctt tccgcgagga tgccgccgcc acagcctaca tctaaaaccc gtttgccgcg
    10981 caaatccgcg tgtccgtcga tataatccag ccgcagcgga ttgatgtcgt gcaaggtttt
    11041 gaactcgccc gacttgtccc accatttgtc ggcaatccgg ctgaacttgg cgatttctcc
    11101 ctcatcgaca ttatattttt tgtcggacat tttccctccc atctgacgaa ccgccccact
    11161 caaaaaccca agattatact atgggacgca atgccgtctg aaagcctttt cgggcggcgc
    11221 ggcgcaaata ccttacaaac ccttacactt tacggcataa tgcaggctgt ttttcccgag
    11281 gaggcttata tgtccgccaa aactccgtcg ctcttcggcg gcgcgatgat tatcgccggc
    11341 acggtcatcg gcgcaggtat gctcgccaac cccaccgcca cctccggcgt atggtttaca
    11401 ggctcgctga ttgtgttgct ttacacttgg ttttccatgc tctccggcgg cctgatgatt
    11461 ttggaagtca acacccatta tccgcacggc gcaagtttcg acacgatggt caaagacctg
    11521 ctcggacgcg gctggaacat catcaacggc atcgccgtcg ccttcgtttt atacctgctc
    11581 acctacgcct acatcttcgt cggcggcgac ctgaccgcca aaggcatcgg cagcgcagta
    11641 ggcggcaaaa tttcgctcac cgtcggacaa ctcgtcttct tcggcatcct cgccttttgc
    11701 gtatgggcat ccgcacgctt ggtcgaccgc tttaccggcg tcctcatcgg cggcatggta
    11761 ttaaccttta tttgggcaac cggcggcctg gttgccgatg ccaaaccgtc cgtcctcttc
    11821 gacacccaag cccccgccgg caccggctac tggatttacg ccgccaccgc cctgcccgtc
    11881 tgcctcgctt ccttcggctt ccacggcaac gtttccagcc tgctcaaata ctttaaaggc
    11941 gacgcgccca aagtggcgaa atccatctgg gcaggtacgt tggttgcctt ggtaatttac
    12001 gtcctctggc aaaccgccat ccaaggcaac ctgccgcgca acgagttcgc ccccgtgatt
    12061 gccgccgaag ggcaagtctc cgtcctgatt gaaaccctgt ccaaattcgc ccaaaccggt
    12121 aatatggata aaatattgtc cctattttcc tacatggcaa tcgccacctc gtttttaggc
    12181 gtaaccttag gcctgttcga ctacatcgcc gacatcttca aatggaacga cagcatgtcc
    12241 ggccgcacca aaaccgccgc gctgaccttc ctgccgcccc tgatttcctg cctgctcttc
    12301 cccaccggct tcgttaccgc catcggctgc gtcggcctgg cggcaaccgt ctggacaggc
    12361 atcatccccg ccatgctgct ctaccgttcg cgcaaaaaat tcggcgcagg caaaacctat
    12421 aaagtttacg gcggcttgtg gctgatggtt tgggtcttcc ttttcggcat cgccaacatc
    12481 gccgcacagg tattgagcca aatggaactc gtccccgtat ttaaaggata aaggcaaaat
    12541 gccgtttgaa acccgccggc ggcttcaggc ggcattgccg caacaaacgg caaccgtatt
    12601 ccggcacaca gcgcattacc ctaccccctc acgcacaaat cccgccccga caggcgcggg
    12661 acgcaaccat aaaggaacaa tgatgaagct caaaatagac attgcaacca acaacttcaa
    12721 acacggcggc ggcacggaac gctacacatt ggatttggta aagggtctga acagacaaaa
    12781 catcacaccg gccgtttatg cgacgaaatt tgatcacggc attcccgaat acgccatgat
    12841 cgaaccccat cttgtcgatc aacgccggac gctgaaaaaa ctacgctcgt tcctcttttc
    12901 aagccggctc gctcaaacca gaaaaaacag tgccgccaaa ctgattgcct gccaccacgc
    12961 cgattacgcc gacctcctca tctgcggcgg cacgcacttg ggctacctgc accatatggc
    13021 gcaaaaaccg aacctgctcg accgcctcgc catacgccgc aaccgcagca actacgccac
    13081 cgccaaactg attgtggcgc attcccatat gatgcggcgc gaactggtcg gactatacgg
    13141 cgttcccccc gaaagaatcc aagtcgcccc ccccccgcag atacggaacg cttctttcca
    13201 caacctagag aaactgccgc cctgcgcgcc aaatacggtt ttgccgacca tgaaaccgtt
    13261 ttcctattcc catcgaccgg ccacacgcgc aaaggcctgg aactgctcgc cgactttttc
    13321 gaacaaaccg aactgcccgt caagctcgcc gttgccggtt caccgcttcc ccgcccgatg
    13381 aaaaacgtcg tcggactggg cttctgcacc gatatgcccg aactctaccg cgccgccgac
    13441 tttaccatta tggcatccct gtacgaaccc ttcgggctgg tcggtgtcga atccgcccta
    13501 tgcggcacac gcgtcgtcct ctccgaaaac atggcatgta cagaggtcat gaacgaagaa
    13561 gccggattct ttttctcacg acaaaacccg gaaaccctcg cgcaagccgt tgcccgggcc
    13621 gtcagcctta aaaaacaggg cggacaccgc ctgtccgacc cgatgcgggc gctgaactac
    13681 aacccgtccc tgtcgcacca catcgaccga ctgaccgaca tgctggcatc cgtataacaa
    13741 aatgccgtct gaacgagttt tcagacggca ttttcgcaac cgttgcagcc gtgcggcaaa
    13801 aagctaacgg gcaattttca aaacgtcgta cagatagttg cggtaatttc cgaccaactc
    13861 ccggttcggg cagtcttcca accctccgcc gcacaaaccg cgcatcgcca tattcgcacg
    13921 catgaagccg tctttggctt ccaaaccagc cgcctccatc agtacgccgc ctgcaaaggc
    13981 aaggtcgagg aaatcctgcc gctgtacgaa tccgccggca atattgctcc tgacggcaaa
    14041 ctgcgttaca taatccggct gagcgtaatc ccatttcttc ctgacggaca cgccctcaaa
    14101 cggtacctga tgatcgccga aataaccgaa aacaaagggt ttgccgcgtt cgtgcagata
    14161 acggtcgaaa ctttccaccg ctttgtccaa atcggcaatg cgcccgatgt agtcgttaag
    14221 cgcggatacg gttttcgcat tcaaatcggg cgcatccaaa tcaaacacat tgtcggtatc
    14281 cgtccgatac ggcccgtgct ccttcatggt cagcacatat acgaacatcg gctgccgcac
    14341 gttttccaaa tcgggatggc gtttttcgag aatcatccgc gcatactgca tcatttcctc
    14401 actggaaatg tgccacaggt ttttgcccat cggcgcggga tagcccaaat cttgcggctg
    14461 gaacatcaga ttaaagccga aatggtcata tgctgccttg gcattgtagt tgcccttggt
    14521 aaacggcgag agcgccacgc aaaaataacc gtgttcgcgc aggttgcgga caaaaccggt
    14581 ctgcaaatgc ggtacgaccg aataaaacac gccgcttgcc aacgcgccga aatctgtgga
    14641 cggaacaccc gccaaaaacg caaattcgga cttccacgtt gcgccgccga aagtatgcac
    14701 gcgcaaaggt gaggaaaata cagtatcttc ctgccgtccg aacattttca aatcgggaat
    14761 tttggcggcg gcaaaatcga aacagtgcgg atcgagcgtc gattccatca gggtaacgac
    14821 aatatcgggc ttttcatccg acatgccgta cggctgggtt tcagacggca tctgcctggc
    14881 aaacgcttcc ccgtcgccct cgaacacggg tacttggaaa aacaccgccc gacaggacat
    14941 cggcaggttc aaaaacacgt cgcgcccgtc gtccggcagc gagtccagcc acgtctttac
    15001 cgcgccgggg tgcttggaaa aatgccgcac cgacacgaac gccgccgcaa acagaaccgc
    15061 gcccgcccaa cgccacggca tacccaaaga atccgcaccg ctccagccga aaaccgcata
    15121 tgccgccaaa gccagcagcc ccgccatacc gataaccgct tccttataat gaaacagcgt
    15181 ttcccaattc cgccagtcgg caatcagcaa aaagtcggaa atcaacagcg gctgtttgta
    15241 ataatggatt ttcagcctgt ggaacagtat cagcaccaca aaccagaccg aagcgaaatt
    15301 caaggcgcgc tgccactgcg ccgtcaacat cagcataccg cccgccaaaa agacaaacag
    15361 cgccgacgcg aaaaaatacg tccagcggta gtgcgacctg acaatcagca gcaccaccgc
    15421 cgttacaaac aaaaatagga aagcataggc aaccatcccg ccccactcct caaaacggca
    15481 tacctgtgcc gttgcgaatt attatcgaaa gcgtgcatta taatgcagca caggcgcatt
    15541 tccaccgata tttcagtata atgccatccc cgaacccgcc caacccaaag gaaccgtgat
    15601 gaaactcatc attctcgacc gcgacggcgt catcaaccgg gaccgcgacg acttcgtcaa
    15661 atccgttgac gagtggatac ctgtcgaagg cagcatggat gcggtggcat tcctgacgca
    15721 ggcaggctgc accgttgccg tcgccaccaa ccaatccggc atcggccgca aatattttac
    15781 cgttcaagac ctcaccgaaa tgcatgccaa aatgcaccgc ctcatccgtc aggcgggcgg
    15841 ggaaatcgac ggcatctggt tctgcccgca taccggcgcc gacggctgca actgccgcaa
    15901 gcccaaaccg ggcatgattg aagacatcct cgaacgcttc aacgcccaag cttcggaaac
    15961 ttggctggtc ggcgacagcc tgcgcgattt gcaggcaatc gatgccgtcg gcggaaaacc
    16021 cgcgctggtt ctgaccggaa aaggcaaaaa aacgctctcc caacacggac acgaattacc
    16081 cggacacaca caggttttcg ataccctgct cgatttctca caatacatca tgcaggaaaa
    16141 cgccgcaccg caagccgact gaacataccg catttccgac aaggcaaaac catgctcatc
    16201 atccgcaacc tgatttactg gctgatactc tgttccagcc tgattttcct ctttcccttt
    16261 atgctgctcg cctcgccttt ccgggacggg gcgcacaaga tggcgcgggt ctgggtcggc
    16321 atcctcaact ggtcgctcaa acacatcgtc gggctcaaat accgcatcat cggcgcggaa
    16381 cacattccgg accgcccctc cgtcatctgc gccaaacacc aaagcggctg ggaaacgctc
    16441 gcgctccaag agatttttcc gccgcaggtt tacgttgcca agcgcgagtt gttcaaaatc
    16501 ccctttttcg gctggggctt gaaactggtc aaaaccatag gcatagaccg caacaaccgc
    16561 cgcgaagcca acgaacagct cataaaacag ggtttggcgc gcaaaaacga aggttattgg
    16621 attaccattt tccccgaagg cacgcgcctt gcgcccggaa aacgcggcaa atacaaactc
    16681 ggcggcgcgc gcatggcgaa aatgtttgag atggacatcg tccccgtcgc cctcaacagc
    16741 ggcgaatttt ggccgaaaaa ttcctttctg aaatatccgg gggaaatcac cgtcatcatc
    16801 tgtccgacca tcccgcacgc aagcggcagc gaagccgaat tgatggaaaa atgcgaacat
    16861 ctcatcgaaa cgcagcagcc gctcatttcc ggcgcaggcc cgtttgccgc cgaaatgccg
    16921 tctgaaaccg catgacctcc ctgattcaca ccctttcaga cggcatagaa ctgaccgtcg
    16981 aaatcaaccg ccgtgccaag aaaaacctga ttatccgccc tatcggcaca cataccgtcc
    17041 gcatcagcgt cccaccctgc ttctccgtct ccgctctaaa ccgctggctg tatgaaaacg
    17101 aagccgtcct gcggcggaca ctggcgaaaa caccgccgca caatacggca aaccgactgc
    17161 ccgaacatat ctggttccac ggcaggcagc ttgcccttac cgcccatcaa gacacgcaaa
    17221 tcctgctgat gccgtctgaa atcctcgccc ccgaaggcgc gcccgaaaaa cagcttgcgc
    17281 tgctgcggga ctttttggaa cggcaggcgc acagttacct gattccccgt ctcgaacacc
    17341 acgcccgcgc cacgcaactg ttccccgcct cctcctcgct gacctccgcc aaaaccttct
    17401 ggggcgtgtg ccgcaaaacc acaggcatac gcctcaaccg gcggctggtc ggcgcacccg
    17461 aatacgttgc cgactatgtc tgcatacacg aactctgcca cctcgcccat cccgaccaca
    17521 gccccgcctt ttgggaactg acccgccgct tcgcccccta cacgcccgaa gcaaaacagc
    17581 ggatcaaaat ccacggcagg gagcttttcg ccttgggctg acgcagcccc gggccgacgc
    17641 tttcagacgg catccgtgcc ggaacaggca cgcgcccgcc cgattcaaac cgcgatgacg
    17701 ctttgccgcc ggttcggggc aggatggcgg catccgcgcc gtccgcaccg tttcatttca
    17761 caccgccctt ccgaaacccg cccgatccga cgtgcggtat gaaacgctta agccggcgcg
    17821 aagccttcta ctgatttgcc cgcgaaaatg ccgtccgaaa ggttttcgga cggcattttt
    17881 ttgcgttttc ctggatggcg gcggattcgt aaaaggcggg cagggtggat tgcaggatgg
    17941 gttgaggccc gccaaatccg ccaactctac cgaatacgcc gccgtcattc ccgcgcaggc
    18001 gggaatttgg ttttgtcggt gcggaaactt atcggataaa acggtttctt agattccacg
//
LOCUS       DAWXHA010000039        17689 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.039, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000039 DAWXHA010000000
VERSION     DAWXHA010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17689
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.039"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..236)
                     /gene="mafA"
                     /locus_tag="AABD07_000974"
     CDS             complement(<1..236)
                     /gene="mafA"
                     /locus_tag="AABD07_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFB2355532.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYS"
     gene            complement(355..1458)
                     /locus_tag="AABD07_000975"
     CDS             complement(355..1458)
                     /locus_tag="AABD07_000975"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HFB2355533.1"
                     /translation="MMETQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPD
                     RLRRKLLDLQDTGTDELHRSRMLSQELSRLYAQTAAELLCSQNLAPCDITALGCHGQT
                     VRHAPEHGYSIQLADLPLLAELTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDR
                     ETRVVLNIGGIANISVLPPGAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGN
                     ILPQLLGRLLAHPYFSQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTV
                     CDAVSHAAADARQMYICGGGIRNPVLMADLAECFGTRVSLRSTAELNLDPQWVEAAAF
                     AWLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            1780..3354
                     /locus_tag="AABD07_000976"
     CDS             1780..3354
                     /locus_tag="AABD07_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HFB2355534.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTD
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASRKGLPVSTTHAIIGGIVGSA
                     LCMAFTHNADGVALIRWGKLGEIGMSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGTMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQSAVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSMASYLILQAVF"
     gene            3368..3556
                     /locus_tag="AABD07_000977"
     CDS             3368..3556
                     /locus_tag="AABD07_000977"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355535.1"
                     /translation="MPSEPVFRRHFVDGMCGLVPYAQSVLSGYAVWYLGFGTVGHKGY
                     DMPPPVLENTYPRQQNAV"
     gene            complement(3594..5015)
                     /gene="hemN"
                     /locus_tag="AABD07_000978"
     CDS             complement(3594..5015)
                     /gene="hemN"
                     /locus_tag="AABD07_000978"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003773836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HFB2355536.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKVLHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            5150..5884
                     /gene="fnr"
                     /locus_tag="AABD07_000979"
     CDS             5150..5884
                     /gene="fnr"
                     /locus_tag="AABD07_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HFB2355537.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNEFSQLDAVIRQSR
                     RLKKGEYLFRAGGAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSYV
                     HSCDAVALENSEVCELPFTHIEELGQNIPSLRTHFFRMISREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            complement(5997..6947)
                     /locus_tag="AABD07_000980"
     CDS             complement(5997..6947)
                     /locus_tag="AABD07_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HFB2355538.1"
                     /translation="MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGR
                     LSCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFAKARLE
                     RPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            7311..8021
                     /gene="rmpM"
                     /locus_tag="AABD07_000981"
     CDS             7311..8021
                     /gene="rmpM"
                     /locus_tag="AABD07_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HFB2355539.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAVPEPEPAPVAVVEQAPQYVDETISLSAKTLFGFD
                     KDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSEKYNQALSERRAYVVANNLV
                     SNGVPASRISAVGLGESQAQMTQVCQAEVAKLGAKASKAKKREALIACIEPDRRVDVK
                     IRSIVTRQVVPARNHHQH"
     gene            8796..9752
                     /gene="thiL"
                     /locus_tag="AABD07_000982"
     CDS             8796..9752
                     /gene="thiL"
                     /locus_tag="AABD07_000982"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HFB2355540.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEGLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTCIGKINGGCRLKVLDAGGRELELHSLGFDHFG"
     gene            9745..10230
                     /locus_tag="AABD07_000983"
     CDS             9745..10230
                     /locus_tag="AABD07_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HFB2355541.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGAFGTLAALPLA
                     FVLILLGIDGLLLAFVCIVLFMWGIRICACAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPPPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(10290..11966)
                     /gene="ettA"
                     /locus_tag="AABD07_000984"
     CDS             complement(10290..11966)
                     /gene="ettA"
                     /locus_tag="AABD07_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HFB2355542.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGT
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPDWD
                     AKIGNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKPKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIARQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKPKRIKYKPVTR"
     gene            12120..13139
                     /locus_tag="AABD07_000985"
     CDS             12120..13139
                     /locus_tag="AABD07_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HFB2355543.1"
                     /translation="MIGDRRAGNHFGFSKANTFQIKKKDLLYVGIYASNSKTRFARAG
                     KKHDLDVELRLSRRSDGLYPAKLADEPHFSNARRRPAQFGLVFHPAAAGGDAGSADSG
                     YYSDRTWKPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYASLAALSFGALMIAL
                     LDVSSNMAMQPFKMMVGDMVNEEQKSYAYGIQSFLANTDAVVAAILPFVFAYIGLANT
                     AEKGVVPQTVVVAFYVGAALLIITSAFTISKVKEYDPETYARYHGIDVAANQEKANWF
                     ELLKTAPKVFWTVTPVQFFCWFAFRYMWTYSAGAIAENVWHTTDASSVGHQEAGNRYG
                     VLAAV"
     gene            13152..13556
                     /locus_tag="AABD07_000986"
     CDS             13152..13556
                     /locus_tag="AABD07_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HFB2355544.1"
                     /translation="MICSFILAKVPNKYHKAGYFGCLALGALGFFSIFFIYNQYALIL
                     SYILIGIAWAGIITYPLTIVANALSGKHMDTYLGLFNGSVCMPQIVASLLSFVLFPML
                     GGHQATMFLVAGAVLLLGAFSVCLIKEIHGGV"
     gene            13560..14521
                     /locus_tag="AABD07_000987"
                     /pseudo
     CDS             13560..14521
                     /locus_tag="AABD07_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
     gene            14704..16961
                     /locus_tag="AABD07_000988"
                     /pseudo
     CDS             14704..16961
                     /locus_tag="AABD07_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
     gene            16974..17624
                     /gene="pgmB"
                     /locus_tag="AABD07_000989"
     CDS             16974..17624
                     /gene="pgmB"
                     /locus_tag="AABD07_000989"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HFB2355545.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYLAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGETEFAELTCRKNDNYLEMIQAVKPEDVYPGILPLLEA
                     LRANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPSPDIFLAAAEGVGA
                     DIRRCRRRRHQSLWRFAHRRGQNRRLGQRHRAGVRHRRADLRLLAKCVGTVGQIKF"
BASE COUNT         3825 a         4594 c         4953 g         4317 t
ORIGIN      
        1 gagtagcgtc cgccgcttat gttgcccgaa ccttggtcgc ccataacgga gacgtaaagg
       61 gcggctttgc gtcctttcag ggcggacaag tccatttctt tgacggcggc gcgggacgat
      121 gcggcgacga gttcctgttc gacggcaaag cgtttgccgc cgccgtgggc gggtatgccg
      181 gtcagtgtgc cgcaggcggt gagtacgagg gggatgagga ggagcagggt tttcatggca
      241 gggtttgttt tgttttgaac gggtttgagt gtaaatggat tttaagggtt tgtaaacgaa
      301 aggggtggaa atgccgtctg aacggcggaa atggctttca gacggtattt gcgctcaata
      361 ataatatccc gcgcccagaa tacacggttt ggatgcgccg gtcgctttgt gcggactacc
      421 gggaatgcgg ttaatccaac acgccgccaa ccacgcaaat gcggcggctt ccacccattg
      481 cggatcgagg ttcagttcgg cggtgctgcg taaggaaacg cgtgtgccga aacattctgc
      541 caaatccgcc attaaaacag gattgcggat gccgccgccg caaatgtaca tttgacgggc
      601 atctgccgct gcgtgtgaga cggcgtcgca aacggtttgc gcggtgaatc gggaaagcgt
      661 ccgcaatacg tcgtatcggt tttcgccgcc gtcaaggtag gtttcgagcc aatttagggc
      721 aaacagttcg cgccccgtgc tttttgggtg gggttgtgag aaatacgggt gggcgagcag
      781 cctgccgagc agttgcggca atatgttgcc ttgtgccgcc tttgcaccgt ttttgtcgta
      841 aggcagctgc cagtgtgcct gcgtccacgc gtccatcagc atattgcccg gccctgtgtc
      901 gaagccgaag gcgggtgcgc cgggggggag tacgctgatg ttggcaatcc cgccgatgtt
      961 cagtaccacg cgtgtttccc tgtcatcgcg gaacagggct tcgtgaaagg cggggacgag
     1021 cggcgcacct tgtccgccgg cggcaaggtc gcggctgcgg aagtcgccga cggtaaaaat
     1081 ccgcgtcagt tccgccagca gcggcaaatc ggcaagctgt atgctgtaac cgtgttccgg
     1141 cgcgtgtcgg acggtttgcc cgtggcagcc gagggcggta atgtcgcacg gagcgaggtt
     1201 ttgactgcac agcagttcgg cggcggtttg cgcgtacagg cggctgagtt cttgcgacaa
     1261 catcctgctg cggtgcagtt cgtctgtgcc tgtgtcctgc aaatccagca atttgcggcg
     1321 caaccggtca gggtaggggg taaaggcgtg cccttccgcg cccagccatt tgccgccgtc
     1381 catccgtacc agcacggcat ccgccccgtc catactggtt cccgacataa tgccgatgta
     1441 aagctgtgtt tccatcatca ctcccaaact ggtgcaaaac gccattttaa cgtgtattga
     1501 cgctcgtata ccgatttgcc gccgcagtgt aaataaagtg taaataaatg ttttaagacg
     1561 ggtggaaaaa tattataatg cgcccgcaac atccagtagt agaagtgtca tacaaaccgt
     1621 ttccggcagc agttttgcat tcggtcaggt ttgggggtat tcggatgcgg ttcagaagga
     1681 aggatgcgtc tgccatatcc cgaaacggca gttcgaccgg aggcagcaat acagtgtcgg
     1741 caacactcat gatttccacc acattaaagg aagattgcca tggctcaaat ccaaatgagc
     1801 gcaaatgtta aaaccatcaa cgccgtcttt gccgccatgc tggtaggtac agtcggctat
     1861 tttatttatt ggggcttggg ttatacccat tacaattacg ccgccttatt cattattgcc
     1921 acgatgttcg gtgtgtttat ggcgttcaac atcggcggca acgatgttgc caattctttc
     1981 ggcaccagcg tcggtgcagg cacgctgacc atcccgcagg ctttgctgat tgcggcggta
     2041 tttgaggtca gcggcgcggt catcgcgggc ggcgaggtaa ccgataccat acgcaaaggc
     2101 atcgtcgatt tgaagggtgt tgatttcgaa cccatacagt ttgtgtttat tatgatgtcc
     2161 gcgcttttgg cggcggcgtt gtggctgctg ttcgcgtccc gcaaaggcct gccggtttcg
     2221 acgacgcacg cgattatcgg cggcatcgtc ggcagtgcgt tgtgtatggc gtttacgcat
     2281 aatgcggacg gggtggcgtt gatacggtgg ggcaagctgg gcgaaatcgg gatgtcttgg
     2341 gtattgtcgc ccgtgttggg cggcgcggtg tcctatttcc tgttttcgcg cgtcaagaaa
     2401 aacgtcttag attacaacgc ttgggcggaa ggaacgctca agggcatcaa gcaggaaaaa
     2461 aaggcctata aagaacggca ccgcctgttt ttcgagggtt tgtccgaagc cgaaaaagtc
     2521 gagtacgcca ccaaaatggc gcacgacgcg caaatttacg acgaacccga attcgatccg
     2581 caagagctgc aatcggagta ttaccgcggt ctttatgcgt tcgacaaccg taaaaacaat
     2641 gtcgattcct acaaggcgct gcattcttgg attcccttta tcgcttcgtt cggcacgatg
     2701 atgatttccg ctatgctgat tttcaagggc ttgaaaaacc tgcatttggg gatgagcaac
     2761 gtcaacagct tcctgaccat ctttatgata ggcgcggcgg tgtggatggg gacgtttgtg
     2821 tttgccaaaa gcctcaagcg taaagacttg ggcaaatcga cctttcagat gttttcatgg
     2881 atgcaggtct ttaccgcctg cggcttcgca ttcagccacg gtgcgaacga tatcgccaac
     2941 gccatcggcc cgtttgccgc gattatggat gttttgcgga cgaacagcgt tgccgcgcaa
     3001 agcgccgtcc ctccgattgc gatgctgact ttcggcatcg cgctgattgt cggtttgtgg
     3061 tttgtcggta aagaggtgat taaaaccgtc ggtacgagtt tggcggaaat gcatcctgct
     3121 tcgggtttta ccgccgaact gtccgccgca tccgtcgtga tgggcgcgtc gctgatgggg
     3181 ctgcccgtgt ccagtacgca tatcttggtc ggcgcggtac tcggtatcgg tctggtcaac
     3241 cgcaatgcca actggaaact gatgaaaccc atcggtttgg cgtgggtcat taccctgcct
     3301 gccgccgctg tattgtcgat ggccagctat ttgattttgc aggcagtgtt ctgattgtaa
     3361 aatactgatg ccgtctgaac ccgtgttcag acggcatttt gttgatggaa tgtgcgggct
     3421 tgtgccttat gcacaatctg ttctgtcggg atatgctgtt tggtatcttg gtttcggaac
     3481 ggtcggacac aaaggttatg atatgccgcc gcctgttctt gaaaacactt atcctcggca
     3541 gcaaaatgcc gtctgaaaaa gcctttcaga cggcttttgt acgttagccg caatcacacc
     3601 gtttgcgaat atttcgcttt ggtttctttg tggcgcaggt ggtagtcgaa gaccatggcg
     3661 atgttgcgga tgaggaagcg tcctttcggt gtaacggtca gcccgtggct gttcaggcgc
     3721 accaatccca aaccggcgag tttttccaaa tccgccagtt cgtctttgaa gtagcggtcg
     3781 aacgggatgc cgaacatact ttcgtaaatc ctgtagtcga gcgcgaagcg gcacattaaa
     3841 tcctgaatga tgttgcggcg caggatgtcg tcctgattga gctggtagcc gcgcatgatg
     3901 ggcagtctgc cttcgtcgat ggcggcatag taggcatcga tgtcgcgttc gttttgggaa
     3961 taggtgctgc cgattttgcc gatggacgac acgccgatgg cgaccaaatc gcaatccgcg
     4021 taggtcgaat agccttggaa gttgcgttgg aggaagcctt ctttgagggc gatggagagt
     4081 tcgtcgtcag gtttggcgaa atggtccatg ccgatgaaga cgtagccgcg ctctgtcagg
     4141 gtttggacgc agtattgcag catatcgagc ttctcttcgc tgtcggggac ggcggcggta
     4201 tcgatgcggc gttgcggttt gaacacgtgc ggcaggtggg cgtagtggta aagggcgagg
     4261 cggtcgggat cgagcgacaa aacggtatct atggtggttt tgatgctttc ggaagtctga
     4321 tgcggcaagc cgtaaatcaa atcgacgctg acggatttga accctgcctc acgggcggca
     4381 tcgatgactt ctttggtttc ttcgtagctt tggatgcggt tgactgccgc ctgcactttg
     4441 gggtcgaaat cctgaatgcc gacgctcatg cggttgaagc cgagtctgcc gagcatgagg
     4501 acggtgtcgc ggctgacttt gcgcgggtcg atttcgatgg aatattcgcc ggacggtatc
     4561 agttcgaaat gtttgcggat catgcggaag acacgttcga tctgttcgtc gctcaaaaag
     4621 gtcggcgtgc cgccgccgaa gtgcagttgg gcaagctggt gccgtccgtt cagatgtgga
     4681 gcgagcagtt ccatttcttt ttcaagatat tcgatgtagg tatcggcgcg gcttttgtct
     4741 ttggtgatga ttttgttgca gccgcagtag tagcagatgg tgttgcaaaa cggaatgtga
     4801 atgtaaaggg aaagcggttt gtttaacgcg cccataccgc gcaaatgtaa aactttgata
     4861 tattcgcctt cgcggaaacc gtcatggaaa cggtcggcgg tagggtagga agtatagcgc
     4921 gggccgctgg cgggcaggct ggcaatcagc gcgcggtcaa actcggggcg gtcatcgttt
     4981 acattgtgat tgttctgtat ctgaatgatt ttcatggtgt gtgtgcggtt ttatgatgtt
     5041 agtcaaattt tggatagttt ggtagaatgc cacagtatga taaacctgtc ttgatatgtg
     5101 tcaacaagca cataatcggg atggggcaaa acacacgaaa aggtacggta tggcttcgca
     5161 taatactaca catcagatga aaacgctgtg ttcttcctgt tctttgcggg aactctgcct
     5221 gcctgtcggg ctgctgccca acgagttcag ccaactcgat gccgtcatcc gccaaagccg
     5281 ccgcctgaaa aaaggcgaat acctgttccg tgccggcgga gcctttacct cgctctttgc
     5341 catccgttcg ggcttcttca aaacaaccgt cgccagtcag gacggccgcg atcaggtaac
     5401 gggtttcttt atgtcgggcg aactcatcgg catggacggc atctgttcct atgtgcacag
     5461 ttgcgacgcg gtcgccttgg aaaacagcga ggtatgcgag ttgccgttta cccatatcga
     5521 agagctcggt cagaatatcc ccagcctgcg tacacacttt ttccgcatga taagccgcga
     5581 aattgtgcgc gatcaaggtg ttatgctgtt gttgggcaat atgcgcgccg aagaacggat
     5641 tgccgccttc ctgttgaacc tttcccaacg cctttattcc cgaggtttcg ccgccaacga
     5701 cttcatctta agaatgtccc gcgaagaaat cggcagttat ctcgggctga aacttgaaac
     5761 cgtcagccgc acattatcca agttccatca ggaaggattg atttccgtcg aacacaaaca
     5821 catcaagatt ctcaatctgc aggtgctgaa aaaaatggta tccggttgtt cgcacgccat
     5881 ttgattaacc tgtacgaaca tttcagacgg cattctcaat aaacacaggg cagacgaaaa
     5941 catctgccct gtttgttgta tctgccgcaa agtgccgcct gaaaaccggc agccgcctaa
     6001 atcgaaaaat cctcgctgat gggcgtgtac agaatcctat ccaccttctc gcgtgtcagg
     6061 tgcggcgcaa acgcttggat aaagtcgtag gcatatccgc gcaaataagt atcgctgcgc
     6121 aaagctatcc acgtcggcga cggctcgaac aggtgtgccg catccacaag ctgcaaatcg
     6181 ccgtccgtat ccgggttgta tgccattttc gccatcagtc ccacgcccaa acccaagcgc
     6241 acataagtct tcaatacatc cgtatccgcc gccgccaatg cgacatccgg ccgttccaaa
     6301 cgggctttgg cgaatgcccg cgcgatgctg ctgcccgcat tgaatgcaaa ttcataagta
     6361 atcagcggaa acctcgccaa atcttcaata cggaggggat tcctgcattc gagcagcgga
     6421 tggtcgttcg gcacaatcac cgcgtgtgtc cagtcgtagc aggaaagcct tcccaactcg
     6481 gggtggtcgt ctatccgttc cgtaacaatc gccaaatcag attctcccga agtaaccatt
     6541 tgggcgatgg cggcagggct tccctgtttg atggtcagat tgactttcgg atagcgtttc
     6601 acaaaatcgg caacaatcaa cggtagggca tagcgcgcct gcgtatgcgt cgtggcaacc
     6661 gtcagcgaac cgctgtcctg tccggtaaac tcgctgccga tatttttaat gttctgtaca
     6721 tcgcgcaaaa tacgttccgc aatatccaaa accaccttgc ccggctgcga gaccgaaacc
     6781 acgcgcttgc cgctgcggat aaaaatctga atgccgattt cttcttccag caatttgatt
     6841 tgtttggaga tgccgggttg tgatgtgaat aaggcttcgg ccgcttcgga aacgttcagg
     6901 ttgtgccggt aaacttctaa ggcgtatttc aattgttgta atttcatggc gggtcggtgt
     6961 gggtctgtgt cgggtggctg aacattgttt ataatttatc atattttctt gccggtacgg
     7021 tatggggctt tgccgttgtg tttgttgttt ttgtgcaacg gcaatcgtgc gatatggaaa
     7081 aaatccccct aaagtaatga cacggaattg atttttcggc atgatagact atcaggaaac
     7141 aggctgtttt acggttgttt tcaggcgttg agtattgaca gtccgccccc tgtttcttta
     7201 tagtggagac tgaaatatcc gatttgccgc catgtttcta cagcggcctg tatgttggca
     7261 attcagcagt tgcttctgta tctgctgtac aaatctaatg agggaataaa atgaccaaac
     7321 agctgaaatt aagcgcatta ttcgttgcat tgctcgcttc cggcactgct gttgcgggcg
     7381 aggcgtccgt tcagggttac accgtaagcg gccagtcgaa cgaaatcgta cgcaacaact
     7441 atggagaatg ctggaaaaac gcctactttg ataaagcaag ccaaggtcgc gtagaatgcg
     7501 gcgatgcggt tgccgtcccc gagcccgaac ccgcgcctgt cgccgttgtg gagcaggctc
     7561 ctcaatatgt tgatgaaacc atttccctgt ctgccaaaac cctgttcggt ttcgataagg
     7621 attcattgcg cgccgaagct caagacaacc tgaaagtatt ggcgcaacgc ctgagtcgaa
     7681 ccaatgtcca atctgtccgc gtcgaaggcc ataccgactt tatgggttct gaaaaataca
     7741 atcaggctct gtccgaacgc cgcgcatacg tagtggcaaa caacctggtc agcaacggcg
     7801 tacctgcttc tagaatttct gctgtcggct tgggcgaatc tcaagcgcaa atgactcaag
     7861 tttgtcaagc cgaagttgcc aaactgggtg cgaaagcctc taaagccaaa aaacgtgagg
     7921 ctctgattgc atgtatcgaa cctgaccgcc gcgtagatgt gaaaatccgc agcatcgtaa
     7981 cccgtcaggt tgtgccggca cgcaatcatc accaacacta aggctaggta atatcttgcc
     8041 gatgcatgag gttagcggat tttgtaccgg gtactgttgc aatattcgtg aaacgtcggc
     8101 cggtatcgat gatgtgaaac aaaccccgct tttgcggggt ttgttttttt gggtggtttt
     8161 ctgaaacggc tatcgtcaga atcggggtgc aggttcggat tcggattcag attcatgttt
     8221 gtgtcccatt gccgcgcttt atagtggatt aacaaaaatc aggacaaggc gacgaagccg
     8281 cagacagtac aatagtacgg caaggcgagg caacgccgta ccggtttaaa tttaatccac
     8341 tatatcggtt gaaactctga ttttaaggcg gtaggatgtg ggtttgccca tagcaaggga
     8401 atcctttctg tatcaagccc cgaaagggat aattcataca aattcacgcc tttccccctc
     8461 attgggaaat ggatggaatc gtgcccgatg tgtgcggcac tgtatgccgg atatggtttt
     8521 atcatcatcc cttttcggtt gaaaccccgc cagttgcagc gattgagcct aatcggtggc
     8581 ggaagttgcc gctttgcatt cggggcggcg tgcagtgcgg tgctttgata tgccgtttgt
     8641 gtgttgaaac agggtggtcg gtgcatacgg gtacggtatg gctaaagcta aaagtgaaat
     8701 acgctgaaac actgaatgag ccgctttatt gtttgtacga cctttgctgc tttgctatga
     8761 tttaaattgg attcgcacgc cggatatttt gggatatgaa agaattcgac ttcatcaaac
     8821 ggtatttgca aacaggtacg gataaggatg tcgtattggg cataggcgac gatgcggcga
     8881 ttgtccgccc gcgcgaaggc ttcgatttgt gtttcagtgc ggatatgctt ttgaaggaca
     8941 ggcatttttt tgcagatgtc aaacctgaag gcttggcttg gaaggttttg gccgtcaata
     9001 tttcagatat ggcggcgatg ggtgcgatac cgcgttgggt gctgctgagc gcggcgttgc
     9061 ccgaattgga tgaagtatgg ctggaacggt tttgcggcag ctttttcggt ttggcaaaaa
     9121 agtttggcgt aacgttaatc ggcggcgata cgaccaaggg cgatatggcg ttcaatgtaa
     9181 ccattatcgg cgaattgccg aagggtaggg cgttgcggcg tgatgcggcg gttgcgggcg
     9241 acgatatttg ggtgtcgggg cgtgtcggta tggcggcggc ggctttgaac tgccgtctga
     9301 aacggtgtgt gttgccggat gatgtgttcg ccgaatgcga acaaaagctg ctccgtcccg
     9361 agccaagggt tgggctgggg cttgcgctgt tgccgtttgc ccgggcggca caggatgttt
     9421 cagacggcct tgcgcaagat ttggggcata tcctgaccgc ttccggcgtg ggggcggaaa
     9481 tttgggccga ttcgctgcca tctttatctg tattgaaaga tattttgccc cgagcgcaat
     9541 ggctgtctta tactttggcg ggcggcgacg attacgagct ggtttttacc gctccggaaa
     9601 gttgccgcag ccgcgtgctt gatgcggcgg aacggtgcgg cgtgccggta acgtgcatcg
     9661 gcaaaatcaa cggaggatgc cgtctgaagg ttttagatgc cggcggcagg gaattggaac
     9721 tacattcttt aggattcgat cattttggct gattttaaac ctgactttgc gtggctgttg
     9781 aaacggccgt tgtgtttttt ggctttcggt ttcggcagcg ggctggctcc gtttgcgccg
     9841 ggcgcattcg gcactttggc ggcactgcct ttggcgtttg tgctgatttt gctcggcata
     9901 gacgggctgc tgctggcttt tgtgtgtatc gtgctgttta tgtggggcat acgtatttgt
     9961 gcgtgtgcgg aacgtgaaac gggtgtcagc gaccacggtg ggattgtttg ggacgagatt
    10021 gtcgccatgc tgtttgtgct ggcgtttgtg ccgttcaggt ggacgtggtg gctggcggca
    10081 tttgttctgt tccgtctgtt tgatgcgctc aaaccgcccc ccgtcggttg gtttgacaag
    10141 aatctgcacg gcggtttggg cattatggcg gacgatatgg cggctgcggt gatgaccttg
    10201 attgtcttga ggattgcaat gctgttttaa acggggctgc cttgtaaaaa tgccgtctga
    10261 aagcctttca gacggcattg tttcggaggt taacgcgtta ccggtttgta tttgatgcgt
    10321 ttcggtttcg cgccttcttc gccgagtcgg cgtttcttgt cggcttcgta ttcttgatag
    10381 ttgccgtcga agaacaccca tttggagtcg ccttcacacg ccaagatatg cgtggctatg
    10441 cggtcgagaa accagcggtc gtgcgaaatc accatcacgc tgccggcaaa ttccaacaat
    10501 gcgtcttcca acgcgcgcag ggtttccacg tcgagatcgt tggacggttc gtccagcagc
    10561 aacacattgc cgccgcccaa caaggttttt gccaagtgca gacggccgcg ttcgccgccg
    10621 gaaagctgcc ttgcgatttt gctttggtcg ctgcctttaa agttgaagcg tcccaaatat
    10681 tggcgggcgg ggatttcaaa ctgtccgacc tgcaaaatat cgcgaccttc ggcaatgttg
    10741 tcgaacacgg ttttgtcgtt ttgcaaacct tcgcggcttt ggtcaatcaa gctcattttc
    10801 acggtttgcc cgattttcac ttcgcccgaa tcgggctgct ctttgcccgc aatcattttg
    10861 aacagcgtcg atttacccgc gccgttcggg ccgatgatgc cgacaatcgc gcccgccggc
    10921 actttgaagc tcaaatcgtc aatcagcact ttatcgccga acgatttgga aacattcaca
    10981 aattcaatca cttcgttacc caaacgctcg gcaacaggga taaagatttc ctgagtttcg
    11041 ttgcgttttt ggtattcgta gttgctcatt tcttcaaaac gcgccaaacg cgctttgggc
    11101 ttggcttggc ggcctttggc attttggcgc acccattcca attcctgctt catcgccttc
    11161 acgcgcgcgg cttcggattt cgcctcgttt tccaagcgtt tttctttctg ctccagccaa
    11221 gacgagtaat tgcctttcca cggaatgccg tgtccgcggt cgagttccaa aatccattcg
    11281 gcggcgttgt cgaggaagta gcggtcgtgc gttaccgcga ccactgtgcc ggggaagcgc
    11341 acgaggaatt gctccagcca ttccaccgat tccgcatcca agtggttggt cggctcgtcc
    11401 aagagcagca tatcgggctt gctcaacaaa agtttgcata aagcgacgcg gcgtttttca
    11461 ccgcccgaaa gattgccgat tttggcatcc caatcaggca ggcgcagcgc gtcggcagcg
    11521 atttccaatt cgtgttccgc accgccgcca gttgacgaac ccgccgcgat aatcgcttcc
    11581 aagcggcctt gttcttccgc cagcgcgtca aaatccgcat cgggattggc gtactcggca
    11641 tacacttctt ccaaacgttt ctgtgcggca gccacttcgc ccaaaccgct ttccacttcc
    11701 tcgcgcacgg ttttttccgg atcaagctcc ggctcttgcg gcagatagcc gattttgatg
    11761 ccgcccatcg gcacggcttc gccctcaaat tctttatcca cgcccgccat aatccgcagc
    11821 acggtggact tgcccgtgcc gttcaagccc aagaggccga ttttcgcgcc ggggaagaaa
    11881 gaaagggaaa tatctttaat gatggttttc tgcggcggca caaccttgct cacgcgcagc
    11941 atagaataga cgtattgttg ggacatagtt ttctcgattc ggtcaaacaa atttcagacg
    12001 gccattttaa ccgataattt gatttaagcc agtttatccg cgaaccggta ttgccaaaat
    12061 cgggcaggat tcataaaatc cgcctatccc tttgaaatta tacagacaaa aaaataataa
    12121 tgatagggga tcgccgcgcc ggcaaccatt tcggattttc caaagcaaat acttttcaaa
    12181 tcaaaaaaaa ggatttactt tatgtcggaa tatacgcctc aaacagcaaa acaaggtttg
    12241 cccgcgccgg caaaaagcac gatttggatg ttgagcttcg gctatctcgg cgttcagacg
    12301 gcctttaccc tgcaaagctc gcagatgagc cgcatttttc aaacgctagg cgcagacccg
    12361 cacaatttgg gctggttttt catcctgccg ccgctggcgg ggatgctggt tcagccgata
    12421 gtggctacta ctcagaccgc acttggaagc cgcgcttggg cggccgccgc ctgccgtatc
    12481 tgctttacgg cacgctgatt gcggtcatcg tgatgatttt gatgccgaac tcgggcagct
    12541 tcggtttcgg ctatgcgtcg ctggcggcct tgtcgttcgg cgcgctgatg attgcgctgt
    12601 tggacgtgtc gtcgaatatg gcgatgcagc cgtttaagat gatggtcggc gatatggtca
    12661 acgaggagca gaaaagctac gcctacggga ttcaaagttt cttagcgaat acggacgcgg
    12721 ttgtggcagc gattctgccg tttgtgttcg cgtatatcgg tttggcgaac actgccgaga
    12781 aaggcgttgt gccacaaacc gtggtcgtag cattctatgt gggtgcggcg ttactgatta
    12841 ttaccagtgc gttcacaatc tccaaagtca aagaatacga cccggaaacc tacgcccgtt
    12901 accacggcat cgatgtcgcc gcgaatcagg aaaaagccaa ctggttcgaa ctcttaaaaa
    12961 ccgcgcctaa agtgttttgg acggttactc cggtacagtt tttctgctgg ttcgccttcc
    13021 ggtatatgtg gacttactcg gcaggcgcga ttgcagaaaa cgtctggcac actaccgatg
    13081 cgtcttccgt aggccatcag gaggcgggca accggtacgg cgttttggcg gcggtgtagt
    13141 cggttgcggc ggtgatttgt tcgtttattc tggcaaaagt accgaataaa taccataagg
    13201 cgggttattt cggctgtttg gctttgggcg cgctcggttt cttctctatc ttcttcatct
    13261 acaatcaata cgcactcatc ctgtcttata tcttaatcgg catcgcttgg gcgggcatta
    13321 tcacttatcc gctgacgatt gtggccaacg ctttgtcggg caaacacatg gatacttatt
    13381 tgggcctgtt taacggctct gtctgtatgc cgcaaatcgt cgcttcgctg ttgagtttcg
    13441 tgcttttccc gatgctgggc ggccatcagg caaccatgtt cttggttgca ggcgcagtct
    13501 tgctgctggg agccttctca gtctgtctga ttaaagagat ccacggcggg gtttgagcga
    13561 tgagcgatac ccccgctacc cgcgatttcg gcctgatcga cgggcgggcc gtaaccggct
    13621 atgtgctgtc caaccggcgt ggtacgtgcg tcttcgtgct ggacttgggc gggattgtgc
    13681 aggaattttc cgttttggca gacggcgtgc gcgaaaaccc cgtggtgtcg ttcgacgatg
    13741 cggcttccta tgcggacaat ccgtttcaga ttaacaagca gatagggcgc gtggccggac
    13801 gcatccgcgg tgcggcgttc gacatcaacg gtaggactta ccgcgtggag gccaacgaag
    13861 gcaggaacgc gctgcacggc ggttcgcacg ggctggccgt tacccgtttc aacgcggtgg
    13921 cggcagacgg ccgacggtta tcccaacgat ttggatattt cctaccgctt ggacgaggac
    13981 ggccggctta ccgttaccta tcgcgccacc gcgctcggcg acacggtgtt cgacccgacg
    14041 ctgcacattt actggcggct ggacgcgggc ctgcacgatg cggttctgca tattccgcag
    14101 ggcggacata ttccggccga tgccgaaaaa ctgcccgtct taacggtttc agacggcctc
    14161 gaagtatttg atttcagccg gcccaagccg ccggatgccg ccgttgccgc cctgcgccgc
    14221 gaaacgggcc ggttttgacg acgcttaccg cgtgccgtcc gatataggcc gtcccgccgc
    14281 agtgttgcaa gccggacgcc gccgtcgtat cagcatatac agcgaccgca acggcttggt
    14341 catctttacc gccgccccgc aggatttcgc gcggcacgat gcgggcgttt acgacgcgct
    14401 ggcgaccgag gcgcagacgc tgcccgacag cctgcattgg cccgaattcg gcaatatccg
    14461 tctgaacaag ggtgatacta gggaggcgac gattgcttac ggcatcgaat ccctttctta
    14521 ggagcttcct aacaccggtt tcagacgacc tttttatagt ggattaacaa aaaccagtac
    14581 ggcgttgcct cgccttgccg tactatctgt actgtctgcg gcttcgtcgc cttgtcctga
    14641 tttttgttaa tccactataa gatttcacca ttccctcaaa tcaatccaaa caggagcttt
    14701 acgatgtaca caagaattat ggaaatcagc ccttggacgc tgcgttcggc aaaactggaa
    14761 aaagaacaca aacggctgca agagagcctg accagcttgg gcaacggcta tatgggtatg
    14821 cgcggcagct ttgaggaaac ctactccgcc gacagccact tgggcaccta catcgccggc
    14881 gtgtggtttc ccgacaaaac ccgcgtcggc tggtggaaaa acggctatcc caaatatttc
    14941 ggcaaagcca tcaacgcgct caatttcagc aaagtcaaaa tctttgtcga cgggcaagag
    15001 gtggacttgg cgaaaaacga cgttgccggc ttctccgtcg aactggatat gcaacacggc
    15061 gtgttgcgcc gctcgttcac cgtattcggt gtgcgtttcg atgtgtgcaa attcctgtcg
    15121 gtcgcgcaaa aagagctggc tctcacccgc tgggaagccg tgtccgttga cggcaaaacc
    15181 caccaagtcc gcatcgattc catcatcgat gccgacgtga aaaacgaaga ctccaactac
    15241 gaagaaaaat tctggcaggt attggacaaa ggcgtttcag acgaccgctc ctacattgcc
    15301 gcccaaaccg tcgccaaccc tttcggtgtg gaacaattta tcgtcaacgc cgggcaaacc
    15361 ttcgccggca gcttcaaagc cttcggcggc agccaaaccg attggcaggt ctctaattct
    15421 tttgaagccg aagtcggcgg cacgcccgaa acctttgaaa aacgcgtgat tgttaccacc
    15481 agccgcgatt atcagggctt ggaagcagtg aaagccgccg gccgcgcctt atctgaaaaa
    15541 atcacaggtg ttgcgtttga aaccttgctg gatgcgcaca aagcaggctg gcagcatcgt
    15601 tgggaaatcg ccgacgtggt catcgaaggc agcgacgaag cacagcaggg catccgcttc
    15661 aacctgttcc aactgttctc cacctactac ggcgaagacg cgcgtctgaa catcggcccc
    15721 aaaggcttta ccggcgaaaa atacggcggc gcgacctatc gggacaccga agcctacgcc
    15781 gtgccgctct accttgcact ggcggaaccc gaagttaccc gcaacctgct gcaataccgc
    15841 cgcaaccaaa ttgccgcagg tgcagcataa cgcacgcgaa cagggcttgg cgggcgcact
    15901 ctgtccgatg gtaacgttta cgggcatcga gtgccacaac gaatgggaaa tcaccttcga
    15961 ggaaatccac cgtaacggtg cgattcctta cgccatctac aactacacca actacaccgg
    16021 tgacgagtgc tatcttgcca aagaaggctt ggaagtcttg gtcgaagtgt cccgcttccg
    16081 ggcggaccgc gtccacttct ccaaacgcaa cggcaaatac atgattcaag gcgtaaccgg
    16141 tccgaacgaa tacgaaaaca acatcaacaa caactggtaa accaacaccc tcgccgcatg
    16201 ggtattgggc tacacccgcg aagccttggc gaaatacccg cgtccgggtt cgaacgtgag
    16261 cgccgccgag ttggaaaaat gggcggacat cagcgcgaat atgtaccgtc cgtatgacga
    16321 agaactcggc gtattcgtgc agcacgacgg cttccttgac aaagacatcc gccccgtatc
    16381 cgcgctttcg cccgacgatt tgccgctcaa ccagaaatgg tcgtgggaca aaatcctgcg
    16441 ttcgcccttc atcaaacagg cggacgtatt gcaaggcatc tacttcttcg gcgaccgttt
    16501 cgacatggac gaaaaacgcc gcaacttcga cttctacgaa ccgatgaccg tgcatgaaag
    16561 ctcgttgtct ccatgtatcc actccatcct cgctgccgaa ctgggcaaag aagaaaaagc
    16621 cgtggaaatg taccggcgca ccgcccgcct ggacttggac gactacaaca acgacaccga
    16681 agacggcctg catattactt ctatgaccgg ctcgtggctc gccatcgtcc aaggtttcgc
    16741 ccaaatgaaa acttggggcg gcaaactcag cttcgcaccg ttcctgccga gtgcgtggac
    16801 aggctatgcc ttccacatca actaccgcgg ccgtctgatt aaagtcgccg tcggcaaaaa
    16861 acgtcgtctt caccctgctc aaaggcgatc cgctcgaatt gcaggtgtac ggcaaagaca
    16921 tcacgctcaa cggcagccac accgttgcat tggaaaaata aggatggcgc aaaatgactt
    16981 ttaccgcagt gctcttcgat ctcgacggcg tgattaccga taccgccgaa taccactacc
    17041 tcgcatggaa aaagcttgcc gaagaattgg gcatcggcat cgaccgcaag tttaacgagc
    17101 agctcaaagg cgtgtcgcgc gacgattcgc tcaaacgcat cctcgcgcac ggcggcaaaa
    17161 ccgtcggcga aaccgagttc gccgaactga cctgccgcaa aaacgacaac tacttggaga
    17221 tgattcaggc agtcaaaccc gaagacgtgt accccggcat tttgccgctg ctggaagcat
    17281 tgagggcaaa cggcaaaaaa atcgccctcg cgtccgccag taaaaacggc ccgttcttgc
    17341 tcgaacgcat ggggctgacc cacttcttcg acaccgtcgc cgaccctgcc gccgtcgcgc
    17401 attccaaacc ctcccccgac atcttccttg ccgccgccga gggcgtgggt gcggacatac
    17461 gccgctgccg gcgtcgccgc catcaaagcc tctggcgctt tgcccatcgg cgtgggcaaa
    17521 accgaagact tgggcagcga catcgcgctg gtgtccgaca ccgccgagct gacctacgcc
    17581 tacttgcaaa atgtgtggga acagtcgggc agataaaatt ctaaggaagt aaaaaggccg
    17641 tctgaacagt gtttcagacg gcctttctgc ttttagaaca gaatgataa
//
LOCUS       DAWXHA010000040        17160 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.040, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000040 DAWXHA010000000
VERSION     DAWXHA010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17160
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.040"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..529)
                     /locus_tag="AABD07_000990"
     CDS             complement(<1..529)
                     /locus_tag="AABD07_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355546.1"
                     /translation="MKKIMFGLLAAMAISNAQAEGNFLNLASKPAKIDGVLEASLDKP
                     YPKFVQDWMKDSKLAGLGRIIQGKIFESTGTIERKFYARSESEHEKTVEDAVGTFKAY
                     CEHHQGTVETLTSDIFCINGRQVQWMGWWYRENYTNFAFSDGYTGEQAYRSKVTDVQP
                     GKKISTSYGPALVLEK"
     gene            complement(582..1565)
                     /locus_tag="AABD07_000991"
     CDS             complement(582..1565)
                     /locus_tag="AABD07_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355547.1"
                     /translation="MMLFFPKDFNRLKIIAYTSPDGDEWVTALEAKLKHREGMIYYSR
                     HRPGTRKKMVLTRRKATNFFRYYSEADSGGASAPESLTHLLCKQVLNELSNLPGGLTT
                     VLNCTEHAEQQPPVTIRLNRALSEYRIDIDGKTFYIDVLLEFDQPGNTSLLRHEIRWQ
                     RKLAVEIWHTSRLASNAPKCLALSKIGIPVVQIRADKGSFLYIDEDELLNYDNEEIKN
                     RINRHVEKLRNTFRKQILCTLLRNPLSADFQTALMLHNQIKADEQQAEQIQEKFEALR
                     NKHVLLEAEYSALAAQYAALLEHQNFQAHSGKREIPKKHGILQRMASWFKS"
     gene            complement(1771..2220)
                     /locus_tag="AABD07_000992"
     CDS             complement(1771..2220)
                     /locus_tag="AABD07_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YhaV family
                     toxin"
                     /protein_id="HFB2355548.1"
                     /translation="MPDSPMQINGYTIYEHECFTQQLDRLATTIESQKRSEKSSRSEE
                     AKLLERILGEIENIALNPDSPEYRLGKTLGPEYKFWRRAKFMGRYRLFFRYDSNSKII
                     ILAWVNDSGTKRTYGGKNDAYTVFKKMLGNGNPPSDWTALLEVVSKE"
     gene            complement(2222..2533)
                     /locus_tag="AABD07_000993"
     CDS             complement(2222..2533)
                     /locus_tag="AABD07_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355549.1"
                     /translation="MKIIFDAVSTMTSKNQTTIPESVRKALGLEKQDKIRFSVLGGGQ
                     VLLEKNNTEEEEFEHDPVVGKFLHFLENSMTKNPNSIKPTSQSRFNRLRQLTWETDMK
                     D"
     gene            complement(2937..3401)
                     /locus_tag="AABD07_000994"
     CDS             complement(2937..3401)
                     /locus_tag="AABD07_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355550.1"
                     /translation="MIENQIDKEITQASCEGRFILKQENGKRFLYLNLPEGSDELNTI
                     WQTDEYDFTVPDLEVSIDVESLHTAVRLLNENQGILHGISTKCSAYSFGFEGKLRYER
                     LDVKPFPIKSFSYYLEFYNDWTGTLYELDLSAFLDEFFGECDPESKLDACLK"
     gene            complement(3490..4269)
                     /locus_tag="AABD07_000995"
     CDS             complement(3490..4269)
                     /locus_tag="AABD07_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355551.1"
                     /translation="MPNWCSNSLHFQGNPQRIAEVAEQILIKTDKGYQFSFQHIVPMP
                     EELILPEVPDSYMQQTWFQIAQQPEKKLINLEREMLEQRDKSFWSVQYRLPDELSSEL
                     KLYFSEKFDWDNLTVGEVFLHFEANSEVASRFRYDGPFAKRIAENIRQYGHPNWYDWR
                     LANWGCKWDVNPDCTFVTVGESGIRISCDTAWGPPEGIYRELAKRFPDVEFEAKYLEE
                     GMWFAGTYEGHEGALFDYPCTDDGVRDFATEHFGCEYDDED"
     gene            complement(4582..4821)
                     /locus_tag="AABD07_000996"
     CDS             complement(4582..4821)
                     /locus_tag="AABD07_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355552.1"
                     /translation="MPDNMKSKTKVPTAVLASWAAILDDIAKAAIIGIGVVVWSNGYS
                     EEMKNLAMAGLVLLSFEMLYVSFLIRIHISKLEDK"
     gene            complement(4972..5487)
                     /locus_tag="AABD07_000997"
     CDS             complement(4972..5487)
                     /locus_tag="AABD07_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355553.1"
                     /translation="MSIKVDNILLIEGTKESVAEAAKLILFRSPVHPEHWAFDFNRIL
                     PLPENITSDLAKQRIEAWGSSFSPYPTETFVTQREGFIEICFLTGLAPPFGIYRKLAE
                     IFANLDVCFTAKYINQYGSFGGRYEYRNSVLYHCLCEMADIRKFGIAEFDIWYEGLSD
                     RLESDGYLVED"
     gene            complement(5584..6154)
                     /locus_tag="AABD07_000998"
                     /pseudo
     CDS             complement(5584..6154)
                     /locus_tag="AABD07_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503622.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6390..6731)
                     /locus_tag="AABD07_000999"
     CDS             complement(6390..6731)
                     /locus_tag="AABD07_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355554.1"
                     /translation="MEQLDSAAPAACDTPSLFDLGRVSMTATVDYRAKEHLPAQLYEN
                     SLYAQILLEAHRHGIWGDIPPEDAKPNQLALKPGEEGRIMSSYKIGDQKIWVVTEWDR
                     SLTTLLFPEDY"
     gene            complement(6810..7931)
                     /locus_tag="AABD07_001000"
     CDS             complement(6810..7931)
                     /locus_tag="AABD07_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase"
                     /protein_id="HFB2355555.1"
                     /translation="METQNHLMHPRVAHNHRDNGYFPTDQATLSRIAACLDIPASAGG
                     LLRIFDPCCGTGEALASLASTLQSEKISCQTYGIELEKDRAQEAMSRLTSVIKSDVEN
                     CTMQGSAVGLLFLNPPYGFAAKDNLSNQRTKRLEELFFARTFGTLQPGGVLVMIVPEA
                     ALTEHLTGEIATHCTDVRMIRAAADTYKQLVIFGIRPKNKASISKKQADAQQRLLLDF
                     ENAPETLPAGMPAYCVPIAPNKVFRPRSFKLEQDILERELGQQQSRTLWPSFSQYFGT
                     SAVIAEKRRPLCALGQWHAALALAAGQVNGVVTSTNGRKLLVKGSTHKTKVETKSEEY
                     GKKDRLVVTITSTDRFSPSIRAIDLTEGSSDFGRVLTIK"
     gene            complement(8780..9037)
                     /locus_tag="AABD07_001001"
     CDS             complement(8780..9037)
                     /locus_tag="AABD07_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355556.1"
                     /translation="MKFFIFIKPDLPFHKESIESWIKFLEDIGKTALLAMLPLFWLNS
                     YSLTERASGVAVLALVAYFVQVYADKLRKYRDSLNRKDTSC"
     gene            complement(9285..11768)
                     /locus_tag="AABD07_001002"
     CDS             complement(9285..11768)
                     /locus_tag="AABD07_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HFB2355557.1"
                     /translation="MYNPVSKIDELLPDFAGLDQTVTEMQERQNQITTDFNFIIRQVA
                     ETAQKSTEAAVLPEESPETELPDSDIPLTQFLAEFGDSLFNAVTEQNQPVYQGQTYPL
                     LEEVLDNLERPLFAAQREVVRAVLQQLVAEDKPAAIINAEMGTGKTMMSVAAAAAAHQ
                     AGLHRTLVLSPPHLVYKWRREILKTVPNARVWILNGADTLAKLLQIRALDRKPEVPEF
                     FVMGRVRMRMGYHWRPSYAVRRRRIPSEGASEGFAVSEYYCPKCGCEILDEENKPYNT
                     EGGVKNALAKNRRFCKGNHHGKPCKEPLWTLCRKEQSEDGVVSTVYDRVLKTMTTLPG
                     IGPKTAAKIIGMYGEQYLAEILENNIQAFSNLMDENGEFLFDDRQAARIDRDLGKAEF
                     SLGRGGYQPTEFVKRYLPKNFFGLLVVDEGHEYKNYGTAQGQAMGVLARCCNKILCLT
                     GALMGGYAEDLFFLLWRLWPQMMIEDGFSYNKGNTLGSASMAFMRKHGVLKDIVRHLG
                     TEYSNGAFSSSKAERNSVRTAKAPGFSPLGIMRYVLPITVFLKLRDLGEGVLPGYKEV
                     FRPVEMTEDQQAVYKNMESVLRQHLKVALRNRDNTLTGVVMSALLSWPDCCYKPQDVY
                     WRRQNKILFHTEPQFDEEKISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLK
                     EIFKRHGIKAAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAFPTIYF
                     LQTGYNVYTLMQAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGD
                     MPDSGLDILNQAEGSVEVQLAKRFVDRQD"
     gene            complement(11864..12355)
                     /locus_tag="AABD07_001003"
     CDS             complement(11864..12355)
                     /locus_tag="AABD07_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFB2355558.1"
                     /translation="MPLPDFRIRLLDAADDRNAFEHPSEPLNRYLQKQVSQDVKRKVA
                     TCFVAVTSDGQILGYYTLAATGVALSNIPAGFRKKLPRYPTVPAVLMGRLAVDGKYGG
                     FGLGSLLLADALKRISKAEIAAYALIVEAKDEAAIGFYRHFGFTSFEDATKHLFFPLA
                     NLR"
     gene            complement(12357..12635)
                     /locus_tag="AABD07_001004"
     CDS             complement(12357..12635)
                     /locus_tag="AABD07_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HFB2355559.1"
                     /translation="MTATYADCRFEARITSDTRALLKHAAELQGRSMSEFVISAAREA
                     AQKAVADAEILMLSERDQLQFAQALLNPSKPNGALSRALEKHDELFGR"
     gene            complement(12874..13215)
                     /locus_tag="AABD07_001005"
     CDS             complement(12874..13215)
                     /locus_tag="AABD07_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355560.1"
                     /translation="MPTLSEKHEVLSGLNRQDAAAIVALIDLKTEDDMEKVLNKLDFM
                     TQNFDARLDAFEKSVDARISSFEKSVDARISSFEKSVDARFSAIDTKINAIYWFIGIT
                     TTVAVAAAKFL"
     gene            complement(13441..14022)
                     /locus_tag="AABD07_001006"
     CDS             complement(13441..14022)
                     /locus_tag="AABD07_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355561.1"
                     /translation="MLYLTSRNDLMADAFFIWNRQLMFASLHGRDADMLSFQAQLQVS
                     NERLGFRRPEEVLSCPRLTTAEHCLNLSKYMTKYQTLNYGSVTHMFLYSDILIQPNFD
                     SKTGWVMLDDVTADLDKAAWQLVRQLSDIPLLEHWQNAVLSVLEADKSIMRFTPRIDE
                     EYAVVGVQAVRVDIPEDFDVRLTAMLQSGRLHT"
     gene            complement(14032..14547)
                     /locus_tag="AABD07_001007"
     CDS             complement(14032..14547)
                     /locus_tag="AABD07_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3275 family protein"
                     /protein_id="HFB2355562.1"
                     /translation="MSINLSGTLTVQVIQGRRGPFKTAKLATSIGTFDVKNPILKQFE
                     PGEYQGNFIIEQLKVKAYEWGGGATSYLDAALDWQHLAEFAQEFSSGSDSPQDDPSDP
                     FDPVPENGIRLPEYAETADQVGEMIAQNREHISLGEYILSDRDELNIARSMMKEAGYS
                     YRPQSQTWCLQ"
     gene            complement(15732..16181)
                     /locus_tag="AABD07_001008"
     CDS             complement(15732..16181)
                     /locus_tag="AABD07_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HFB2355563.1"
                     /translation="MTQSNQNYFNLTADGIGFLNRPREVQGKRKSSNYYACTIQASRG
                     DNGEKTRFDLRIVGGQAKELFARLLEEFPQLLSKNYRERPTVVVGFRAGDIQPLKFET
                     NNRETGEVLETLSIDGRLLKFKFIKVDGDMWYQSSSQDETQNNPDAS"
     gene            complement(16445..17017)
                     /locus_tag="AABD07_001009"
     CDS             complement(16445..17017)
                     /locus_tag="AABD07_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HFB2355564.1"
                     /translation="MDRRNFLKKFVGVGALYTTGAAGLLLPKDVVAATSMADFWSRDR
                     TINCKRADTGEKHEIRFFQQQNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYA
                     MQEWARQSGRSNPVITINSAYRTPRRNATIEGAARNSLHMRGKAVDFTMRGVGIGELE
                     QMAKYYNVGGIGIYNSFVHLDTGRVRHWRG"
BASE COUNT         4694 a         4053 c         3795 g         4618 t
ORIGIN      
        1 ctttttctaa gaccaaggca ggcccatagg aagtggagat ttttttaccg ggttgtacat
       61 ccgtaacttt gctgcggtag gcttgttccc ctgtatatcc atcagagaat gcaaaattcg
      121 tatagttttc tctgtaccac catcccatcc actggacttg tctgccgttg atacagaaaa
      181 tatcggaagt cagggtttca accgtcccct gatgatgttc gcaatatgct ttgaaagttc
      241 ctactgcatc ctcaaccgtt ttttcatgtt cggattcgga tcttgcatag aattttcgtt
      301 caatagttcc cgtactttca aaaatcttgc cttggatgat acggccaagt cccgccaatt
      361 tactgtcttt catccaatct tgtacaaact tgggataggg tttgtctaaa gaagcttcca
      421 ataccccgtc aattttggcc ggctttgaag caagattcaa gaaattacct tcagcttggg
      481 catttgaaat ggccatagct gctaataatc cgaacataat ttttttcatt gcaatatttt
      541 cctcatctta ttgaaactta gggtttgttc taaacagtgg tttatgattt aaaccaactg
      601 gccatgcgct gcagaatccc atgctttttc ggaatttccc ttttcccgga gtgagcttgg
      661 aaattctgat gttctaataa ggctgcgtat tgggcggcca aagccgaata ttcagcttcc
      721 aataaaacat gtttattcct cagcgcctca aatttttcct gtatttgctc tgcttgttgt
      781 tcatcggcct ttatttgatt atgcaacatc aaggccgtct gaaaatccgc actcaaagga
      841 ttacggagta gggtgcagag aatttgtttc cgaaaagtgt tccgaagttt ctctacatgg
      901 cgatttatgc ggtttttgat ttcttcatta tcataattga gcagctcgtc ttcatcaata
      961 tacaaaaatg aacccttatc tgcccgtatc tgaaccaccg ggatacctat tttcgataag
     1021 gctaaacatt taggcgcatt ggaagccaac cgtgatgtat gccaaatctc aaccgccaat
     1081 tttctctgcc accttatctc gtgcctgagc agggaagtgt tacccggctg atcaaattca
     1141 agcaaaacat caatataaaa agttttgcca tctatatcta tccgatattc ggataatgca
     1201 cggttcagcc taatagtgac aggcggttgt tgctcggcgt gttctgtgca atttagaaca
     1261 gtcgtcaggc cgccgggtaa gttggatagt tcgttcagca cttgtttgca aagcaagtgg
     1321 gttagcgatt caggggcgga agcaccaccg gagtcggctt cactgtaata gcgaaaaaaa
     1381 ttggtcgcct tcctcctggt caaaaccatt ttctttcttg taccgggacg atgacggctg
     1441 tagtagatca ttccttcccg gtgttttagc tttgcttcca gcgcagttac ccattcatca
     1501 ccatccggac tcgtataagc aataattttc aaacgattaa aatcctttgg gaagaaaagc
     1561 atcatcagaa taagacaaca ataaaatcct atatatcctg tttgccgcca aagggcaatt
     1621 ttttctcccc ccccttttta gatttgtccg gctcatatac ggacatgggc aacattatag
     1681 ataacagcaa ttattattac aatgttgtaa cattcagtct aatactgtat tttgaccatg
     1741 agaatcttct aagggctgtt ttcttttgct ctattccttt gatactactt caagcagtgc
     1801 agtccaatct gaaggaggat ttccgttccc cagcattttt ttgaacacgg tatatgcatc
     1861 atttttgccg ccataagttc ttttcgtacc cgagtcgttt acccatgcga gaatgatgat
     1921 tttactgttt gagtcgtaac ggaaaaacaa tcggtatcta cccataaact tggcacgtcg
     1981 ccaaaatttg tattccgggc cgagtgtctt gccaagccga tattccgggc tatccggatt
     2041 aagggcaata ttttctattt cgcctaagat tcgttccagc agtttggcct cttcggatct
     2101 actggatttt tcggatcgtt tctggctttc tatcgtagtg gccagtctgt ctaattgctg
     2161 cgtaaagcat tcgtgttcgt aaatggtata tccgtttatc tgcatagggg aatcaggcat
     2221 attagtcttt catatctgtt tcccaagtca gttggcgaag gcggttaaag cgtgattgag
     2281 atgtgggttt gatggaattc ggattttttg tcatagaatt ttccaaaaaa tgcaggaatt
     2341 ttccaacaac tggatcatgc tcaaattctt cttcctcagt attgtttttt tctagcaata
     2401 cctgtccgcc gcctaagacg gaaaaacgga ttttgtcctg tttttccagc cccaacgcct
     2461 tgcgtactga ctcgggaatg gttgtttggt ttttgctggt catagttgac actgcatcaa
     2521 aaataatctt catggtctct ttgccctgcc ttcattcaaa tttactgttg ctacttgcga
     2581 cttcaatgtc ctagttacgc acatcttcta cttaacggct tgggaaatta ttgatattgt
     2641 taaaaactgc ttaaattaaa gaattctgtt tattgtaagg aaatttcctt acagggtcaa
     2701 tacccaaccc cttcgacctg caagggcgtt tatgaatacc catttactga ctggcagcga
     2761 tgacacgctt aagtgaggga gcaggcgtag gccggaggta attcctgttc ccgagctgtc
     2821 ggcggcgaga ccgggggatt gggggcagag accccaaaaa tatcagagta tgggcacaaa
     2881 aaaacggccg cattagcggc cgttggtttt gaaaaagatt atttgaggca caaatgctac
     2941 ttcaaacagg catcgagctt ggattcagga tcacactctc cgaaaaactc atccaggaac
     3001 gctgataagt ccagttcata caacgtcccc gtccagtcgt tataaaactc caaataataa
     3061 gagaacgatt tgatagggaa aggctttaca tccaatcttt cgtatctcaa ctttccttcg
     3121 aaaccgaacg aatacgcact gcattttgtg ctgatgccgt gcaaaatgcc ctggttttcg
     3181 ttcaaaagtc taacagcagt gtgaagggat tcaacatcga tgctgacttc taagtcgggt
     3241 acggtaaagt catactcgtc cgtctgccaa atggtattta attcgtcact accttcgggc
     3301 aggttaaggt aaaggaaacg tttgccgttt tcctgtttta ggatgaatcg gccttcgcat
     3361 gaagcctgag tgatctcttt gtcaatctga ttttcaatca tttctaatct ccacaaaaaa
     3421 gcgggggaca accctgcggg ttgtccccgc agggtgagtt ggcaatacgt ctaacgaaat
     3481 ctaagttctt taatcttcgt catcgtattc gcatccaaag tgctcggtag cgaagtcacg
     3541 gactccatca tctgtgcacg gataatcgaa caatgctcct tcatgacctt cataggttcc
     3601 tgcaaaccac attccttctt ccaggtattt ggcttcaaat tctacgtcag gaaaacgttt
     3661 ggcgagttct ctataaatcc cttccggagg accccaggca gtgtcacagc tgatccggat
     3721 gccgctttcc ccaactgtca caaaagtgca gtcggggttt acgtcccatt tgcagcccca
     3781 gttagctaac cgccagtcat accaattcgg atgaccgtat tggcggatgt tttccgcaat
     3841 acgcttggca aatggtccat cgtaacggaa acgagatgcg acttcagagt tagcttcaaa
     3901 atggagaaat acttcaccaa cagtcagatt gtcccaatca aatttttccg aaaaatatag
     3961 ctttaattca gaggaaagtt catccggcaa tctatattga acggaccaaa aggatttatc
     4021 gcgctgttcc agcatttccc gttccaaatt gatcaacttc ttttcaggtt gttgagcaat
     4081 ttgaaaccag gtctgctgca tgtaactatc aggcacttca ggaagaatca gctcctccgg
     4141 catgggtaca atatgctgaa agctgaattg ataccccttg tcggttttga tcagaatttg
     4201 ctccgccact tcggcgatac gttgaggatt gccttgaaaa tgaaggctgt tgctgcacca
     4261 gttgggcata gtagtctcct aagcaggaat ccccatccct gcggataagg aaacccgcag
     4321 gttgatgggc ttgcgcccgg gttgataaaa aagccgccac cggaaaccgg cgcacatttc
     4381 agacgacagg tgctttagat aaaaggcaaa gaaaccgaaa cggtaacttt gcctttggga
     4441 agcggaacga cggttccgcc ggcttgatga aaaatgtgct taagcacggt tattttttgg
     4501 gggttttaag atagattctc gcaacaataa caagaaccag gccgactgcg gccatgaccc
     4561 aagttccggt aacgaagtcc attatttgtc ctccagttta gagatgtgaa tgcggataag
     4621 gaatgaaaca tacagcattt caaacgacag gagcaccaat cctgccatgg caagattctt
     4681 catctcctca ctatatccgt tactccagac caccacaccg ataccgataa tcgccgcttt
     4741 ggcaatatcg tccagtatgg cggcccatga agccagtacc gcagtgggta cttttgtttt
     4801 cgatttcata ttgtcaggca tatacacctc cataaaaaaa ggagatgtac gcctgacggg
     4861 gaatacatcc ccttcagggt tgataaaaga gccgtgcatc cgaaacggat gtgcatttgg
     4921 ttaacggcgg tatgcgggcg gtttgacgga ctgcctaccg tgtaacatag tctaatcttc
     4981 taccaaatac ccgtcgcttt caagtctatc ggacaagcct tcgtaccaaa tatcgaattc
     5041 ggcgataccg aatttacgga tgtcggccat ctcgcaaaga cagtggtaaa gcacgctgtt
     5101 acggtattcg tagcgtccgc cgaaacttcc gtactggttg atgtatttcg ctgtaaaaca
     5161 tacatccaag ttggcgaaga tttccgcgag tttgcgataa ataccgaaag gcggtgccaa
     5221 tccggttaaa aagcagattt caataaaacc ctctctttgt gtaacaaagg tttcggtggg
     5281 atatggggaa aaactgctgc cccatgcctc gattctctgt ttggcaaggt cagacgtgat
     5341 attttcgggt aaaggcaaaa tccgattgaa atcaaaagcc caatgctcag gatgaacggg
     5401 ggagcgaaat aaaatcagtt tcgccgcttc ggcaaccgat tctttggttc cttctattag
     5461 aaggatgttg tcaactttga tagacataac tatctccagt agagtctctg cccctgcggc
     5521 caaaagaccg caggtaatgg aatgggcatt tacccagttg gaaaagaagc acggcggtta
     5581 tgcctacaca ttgtacagct cgggcaggat ttcgcggttc agccagccgg tgacgacttc
     5641 gcgcagcaca tggcggcagc catcagtcag aacatcagat agactgaaac cgaactcgta
     5701 cagccccagc ccttcattcg actgccactc gatgatggca ttgatgtggc ggcggaaaat
     5761 ccaggcaatg tcttcatctg ataaatactg caatgccccc ctgaaaaata accattttgt
     5821 caggacggtt gaaatactgc cgataggcag gcatcagata gcgcatgtcg gcaacggcgg
     5881 atacgccttt accggcgtat ccgtcctcaa ggtaagtgac ggctgcaacg gcatcaccat
     5941 tgctactgct gatgcaaacc atgtcggcat tagcctgttt ggcaaactct tcacaggttt
     6001 gggcaaagac ggccaaatca gcccctaatc caaatctttt cagttcacgt ctaatagcgg
     6061 ccatgacacc atccgtgtga gcggtcaaaa ctgcaccgtt caatttagct gccgcagctg
     6121 ccgattcttc ccgatcggga ttaaagtttt gcattgtgtt gctccttaaa aagaaaacgg
     6181 agaacacagt ccgtagggat tgtgttcccc acggggttga taaaagaaaa tgccgtacat
     6241 ccctaaggat gcgtgtcatg tttaacggca ggacacaaga cagataaggt ctgccagcct
     6301 gtaaagacag gtattttcag acggccttac taaagccgtc tgaaaatacc tgcccgaagg
     6361 caggtgagat atataaaaag attacaaggt cagtaatctt ctgggaacag gagtgtggta
     6421 aggcttctgt cccattctgt aacaacccaa attttttggt ccccaatctt gtaagaagac
     6481 attattctgc cttcttcacc tggcttgagt gccagctgat tcggcttggc atcctcagga
     6541 ggaatatcac cccatatgcc atggcggtgg gcctcaagca atatttgggc ataaagactg
     6601 ttctcataca gttgtgcagg caggtgctct tttgcccggt aatctactgt tgccgtcata
     6661 gacactcggc ccaggtcaaa cagagagggg gtatcacatg cggccggagc tgccgaatca
     6721 agttgttcca ttaggcgtat ccttaaaaaa aaaccggata cacccctgcg ggaagtaccc
     6781 ggcagggttt aaaaattgaa taggccaatc tatttgattg tcaggactcg tccaaaatcc
     6841 gacgatcctt cggtcaaatc aattgcgcgt atgcttggag aaaaccggtc agttgaagta
     6901 atcgtgacca caagcctgtc cttcttgccg tactcttccg atttggtttc cactttggtt
     6961 ttatgggttg aacctttaac cagcagcttt cggccattgg ttgaggtgac aacgccatta
     7021 acttgccctg cggctaatgc taaagcagca tgccactgac ccagagcaca taaaggccgg
     7081 cgtttttcgg ctataacggc actggtgccg aaatattgcg aaaatgatgg ccataacgtg
     7141 cgggattgct gctgtcccag ttcacgttcc aatatatcct gctccaattt aaagcttctg
     7201 gggcgaaaga ccttattggg tgcaataggc acacagtatg caggcatacc ggccggcaaa
     7261 gtctcagggg cattttcaaa atcaagcagg agcctttgtt gggcatccgc ctgttttttg
     7321 ctgatagagg ctttgttctt cggtcggatg ccgaatataa ccaactgttt gtaggtatcc
     7381 gccgcagccc ttatcatacg gacatccgta cagtgggtag cgatttcgcc ggttagatgc
     7441 tctgtcaggg cggcttccgg aacaatcatt accaacactc cgccgggctg caaagtaccg
     7501 aaggtacgtg cgaagaaaag ttcttcaagc cgtttggttc tttgattaga cagattgtct
     7561 ttggcggcaa agccgtaagg aggattcaga aacaggaggc cgactgccga accctgcatg
     7621 gtgcagtttt ctacatcgga tttgatgaca ctggtcagtc ggctcattgc ctcttgagca
     7681 cggtctttct ccagttcaat cccgtaagtt tgacaactta ttttttccga ttgcaaagta
     7741 gaagctaaag aagccagggc ttctcctgtt ccgcagcaag gatcaaatat gcgtaacaaa
     7801 cctccggcag atgccggaat atcaaggcaa gcggctatac gcgacaatgt ggcctggtcg
     7861 gtggggaagt atccgttgtc acggtggtta tgcgcgacac gggggtgcat cagatggttt
     7921 tgagtttcca tattggtctc cattcaaata aaaaacggag acatgccgtg cgggacagtc
     7981 cccgcagggt taaatcaaag tttaatcgaa ggtaccgcca cgttctatat gacgtaccat
     8041 tgttttaaaa ttcagcaatc cacgcggatc ctgtcccggc gagccgggta tcggaatttt
     8101 tcgatcggtc ggtaggtgct tcaatgcgct gtgcttacga ccgtttttgg ggaggaacat
     8161 ccattctccc ccccgatacc agttggtgta taaaaaattg ataatctttg tttttgctat
     8221 atctcatttc ttctccgata caaaaatagg ttttcctcct gcaaatggtt aaaaatacac
     8281 gcatacgatt aaaaaaaacg taaccgcatg acttccaaga aaaatcccac tgccgtacag
     8341 acgtacggaa cagcgggatt gcggcttcaa gccggattta tctaaaaagg aacgtatcag
     8401 cgttctattt aaaatgcttt ggtattaaat agcaacaaag catttaaaag atgggaatac
     8461 caattaactt gaccggtcat gtgtattagt gtcttgctga gactcgccaa actttaccag
     8521 tttaaatatg ccaaacaaca tgacggcaat caaaaatagt aagctgtagg tcatgatcat
     8581 ggtttttccc tttccttggg ttcctgtttg acaatctttg attcatattt atccaagtaa
     8641 aagataaata cttgagctac atagaatgaa ccgcgttaac ggtttttgtg ttcttccgac
     8701 gtacgcgaag tttcaagctg cttggtaatc caatagccga aagcaagcac caggaagaga
     8761 ataaatagca gaccgcctat cagcatgacg tatcctttct gtttaatgaa tcacggtatt
     8821 tccgtagttt gtcagcatat acttgcacaa agtaggcaac caaagccaat acggctacgc
     8881 cggaagcacg ttcggtcaaa gagtatgaat tgagccaaaa caacggcagc attgccaaca
     8941 aggctgtttt acctatatct tccagaaatt tgatccaaga ttcaatgctt tccttgtgaa
     9001 aaggaaggtc gggtttgatg aatataaaaa atttcacatc ggtatctcca tgaaaaaggg
     9061 agatataccg atgccctgtg gggatacggt atatccccac agggttaaag aaagttgaaa
     9121 aagagccgtc cgtcccgaag gacgtgcgca atgggtaacg gcagtgcgcg ggcagataag
     9181 gtctgccagc ctgtgaaatt ccaccttacg ggctttttca gaagacctca acacgaggtc
     9241 gtctgaaaaa acccactaaa cgcgggttag atgcaaaaat tgcatcaatc ttgtcggtca
     9301 acgaagcgtt tggccaactg aacttcaact gaaccttcag cctgattcag aatgtccaga
     9361 cccgaatcgg gcatatcacc ggaggttgac tgagtaacgg caactttttg ccccatcagt
     9421 tcaaggcaaa tttgctgcgc tgtatcgctg taaccggcga aatacacttc cacgtcttcc
     9481 ttctgaccaa tacgccaaga acggcgggca gcctgcatca gggtataaac gttatatcct
     9541 gtttgcaaaa agtagatggt tggaaatgcc aacaagtcca aaccggtttt gaccagctcc
     9601 ggattacaga taacaacctg tacgcctgaa gccaattggt cttcaaccca gtcttcgcgt
     9661 tgatcggctt tgaccgtcgc tttcattacc gccgccttaa taccgtgccg tttgaaaatc
     9721 tctttcagac ggcctgtcgt atcacgggta tcggtataaa cagtatagac cagacattta
     9781 cgtcctttag ccagactgtc tttaacgact tccagcatgt cagcttcttt cggtgagatt
     9841 ttttcttcat cgaactgggg ttcggtatgg aaaagaatct tgttttgtct gcgccagtaa
     9901 acatcttgag gtttgtaaca acaatccggc catgacagca aggcgctcat aacaacgccg
     9961 gtaagggtat tgtcacgatt ccttaatgcc accttcaaat gctgcctcaa aacactctcc
    10021 atatttttat agaccgcctg ttgatcttca gtcatttcaa ccggccggaa aacttcttta
    10081 tagccaggta aaacgccttc tcccaaatca cgcagcttaa gaaatacggt aataggcaaa
    10141 acataacgca tgatgcccaa aggggaaaat cccggcgcct tggcggtgcg aacgctgtta
    10201 cgctctgctt ttgagctact gaatgcgcca ttactgtatt cagttccaag atgtcggaca
    10261 atatccttca aaacgccatg cttacgcata aacgccatgc ttgccgaacc caaggtattc
    10321 cctttgttgt aactgaaacc gtcttcaatc atcatttgcg gccaaagccg ccacaataga
    10381 aagaacaggt cttccgcata accacccatc agcgcaccgg ttaagcacag gatcttatta
    10441 cagcaacgtg ccaaaacgcc catggcttga ccttgagccg taccgtagtt cttgtactcg
    10501 tgaccttcat ctactaccaa cagcccgaaa aagttcttcg gtaaatagcg tttgacgaac
    10561 tcggtcggct gatacccgcc tcgtcccagg ctgaattctg ctttgcctaa gtctcggtcg
    10621 atacgcgccg cctgacggtc gtcgaataaa aattctccgt tttcatccat caaattggaa
    10681 aacgcctgaa tgttgttttc caagatttca gccagatact gctcaccata catcccgatg
    10741 atttttgctg cggttttagg accgatgccg ggtagggtgg tcatggtttt aagtacgcga
    10801 tcgtacactg tgcttacaac cccgtcttca ctctgttcct tgcggcacaa ggtccagagc
    10861 ggttccttac acggtttgcc atgatgattg cctttgcaaa aacggcggtt tttagccagg
    10921 gcgtttttca caccaccttc agtgttataa ggcttgtttt cctcatccaa gatttcacag
    10981 ccacatttag gacagtaata ctcggaaacg gcaaaaccct cagaagcacc ttcagaaggt
    11041 atccggcggc ggcgaacggc atacgaaggc ctccaatggt agcccatgcg catccgaaca
    11101 cgccccatca caaaaaactc cggaacttcg ggtttgcggt caagggcacg gatttgcaac
    11161 agttttgcca atgtatcggc tccgttaaga atccatacgc gggcattggg taccgttttg
    11221 aggatctctc gtctccactt gtacaccaaa tgaggaggac tcaataccaa ggtgcggtgc
    11281 aaacctgctt gatgcgcggc agcggctgct gcaaccgaca tcatggtctt acctgtgccc
    11341 atttcggcat taataatggc tgcgggtttg tcctctgcca ccaattgctg taatacggcg
    11401 cgcacaactt cgcgctgcgc cgcaaacaaa ggacgttcca ggttatccag cacttcttca
    11461 aggagaggat aagtttgtcc ctgatagacc ggttggtttt gctcagtaac tgcgttaaag
    11521 agactatccc caaactcggc aagaaactgt gtcaggggta tgtcggaatc cggcagttca
    11581 gtttccggag attcctccgg caatacggca gcttccgtac ttttttgggc agtctcagcc
    11641 acttggcgga tgataaagtt gaaatcagta gttatttgat tctgacgctc ctgcatctcg
    11701 gtcacagttt gatccagccc tgcaaaatcc gggaggagtt cgtctatttt tgatacgggg
    11761 ttatacatcg tatgctccta aaaaaaagac ggagcaaacc ccggcgacgg gggattgccc
    11821 cgtcagggtt agaaaccgct accgtatggt gcggaaaaag gggttagcga agattcgcca
    11881 aaggaaaaaa tagatgcttg gtggcatctt cgaaagaagt aaagccgaaa tgcctgtaaa
    11941 agccgatggc agcttcgtct tttgcctcca caatcaacgc atacgcggcg atttctgctt
    12001 tactgatacg tttgagtgca tcagccaaaa gtaaagaacc cagtccaaac ccgccatatt
    12061 ttccatctac cgccaaacgg cccatcagca ctgcgggaac cgtagggtat ctgggcagct
    12121 tcttacgaaa accggcgggt atattactta gggcaactcc tgttgcagcc aatgtatagt
    12181 agccaagaat ttgaccgtcg gatgtaaccg cgacaaaaca agtagcgact ttccgtttta
    12241 cgtcttgcga aacctgtttt tgcagatagc ggtttaaagg ttcggaaggg tgctcaaatg
    12301 cattgcggtc atcggcagca tcaaggaggc ggattcggaa gtccggtaac ggcattttat
    12361 ctcccgaaca attcgtcatg tttttccaat gctctgctca atgccccatt cggtttggac
    12421 ggattgagca gggcttgggc aaactgaagt tggtcacgtt cggacagcat cagaatctcc
    12481 gcatcggcaa ctgctttttg ggcagcctcg cgggcagcac tgatgacaaa ttcggacata
    12541 ctgcgtcctt gaagttccgc agcgtgttta agtaaagcac gggtatctga agtgattctt
    12601 gcttcaaaac ggcaatcggc atatgtggca gtcatgaaca tactcctaaa ttatttctag
    12661 attgtacggc tgattaccgt acaaaacaag atatgaaagg gtattttgta gaaaacatca
    12721 catgctccaa agtaacggag atatacgatc tccataggta tgtatatccc catagggttg
    12781 agtgagaagt gataaaaatc ccaccggatg ccggaacatg gtgggattca aggttacaga
    12841 taaaaagctc cgtttaacgg aacgggttta atgttacagg aacttcgcag cagcaacggc
    12901 aacggtagtc gtgataccga taaaccaata aattgcattg attttagtat cgattgcgct
    12961 aaaccgtgca tctacacttt tttcaaatga gctgatacgg gcatctacac ttttttcaaa
    13021 tgagctgatg cgggcatcta cacttttttc aaaagcgtcc agtcgggcat cgaagttctg
    13081 ggtcatgaaa tccagtttgt tcaaaacctt ttccatgtcg tcctccgttt tcaaatcgat
    13141 taaggctact atagcagctg catcctgacg gttcaagccg gacagtacct catgcttttc
    13201 agatagagta ggcataaaat cctcctaagt ttgggaatat gcctccccat gggacgtata
    13261 tccccacagg gttggtaaaa ttgaaaaatg ccgcaaccat acgaatacgg ccggataacc
    13321 tcagcagcaa tatccatcaa cggaatatac agtccgtcat ctgtgtaaaa ctcttatgta
    13381 acagactttt tcagagagcc tttgcaaggc cgtctgaaaa agcccgctag gggcttcaga
    13441 ttaagtatgt aagcggccgc tttgtagcat agcggtcaaa cgcacatcaa aatcttccgg
    13501 gatatcaact cgtaccgctt gaactccaac tactgcgtac tcttcatcta tacgaggagt
    13561 aaaccgcatg atggatttat cagcctcaag taccgataaa acagcattct gccaatgttc
    13621 caataacggt atatcggaga gttgccgcac cagttgccaa gctgccttgt ccaagtctgc
    13681 ggtaacatca tccaacataa cccaacctgt tttactatcg aagttaggtt gaatcagaat
    13741 atccgaatac aaaaacatgt gcgtgaccga accataatta agagtctgat atttcgtcat
    13801 gtatttgctc agattcaagc aatgctcggc agtcgtcagg cgcggacagc ttaaaacctc
    13861 ctccggccgt ctaaaaccaa gccgttcatt acttacttgc agttgagctt ggaaggacaa
    13921 catgtctgca tcgcggccgt gcagagaagc aaacatcaac tgtcggttcc aaatgaagaa
    13981 ggcatcggcc atcaaatcat tgcgggaagt caggtaaagc attccaacct cctattgcag
    14041 acaccaagtc tgcgactggg gccgatagga ataccctgcc tccttcatca ttgaacgggc
    14101 tatgttcagc tcgtcacggt ctgaaaggat atactcaccc aaactgatat gctcccggtt
    14161 ttgggcgatc atttcgccga cctgatccgc agtttccgcg tattcaggca accggatgcc
    14221 gttttcagga accggatcga acggatcgga tggatcatct tgcggagaat ccgacccgga
    14281 agaaaattcc tgcgcaaatt ccgccagatg ttgccagtca agagctgcat ctaagtaaga
    14341 ggtggcgcca ccaccccact cataagcctt aactttgagc tgttcaataa tgaagtttcc
    14401 ttggtattca ccaggctcaa actgtttcaa tattgggttt tttacatcaa atgttccaat
    14461 tgatgtagct aatttagctg ttttgaaagg gcctcggcga ccctgtatga cttgcaccgt
    14521 caaggtgccg gaaagattga tggacatggt atcactccaa aagaaaaggg ataccggccg
    14581 cgggcagata tcccgtggtt gggaaaaaac aaattagcgc ttaatagcac tgtaaatctt
    14641 atccaaatat actttttggg acatacgcag tcccaatctt gtaaaaatac gtttgtcgtt
    14701 atccaatgcc cgaatagcca tattcaacgc tacggaagcg tttttatggc tatgaacatc
    14761 gttgacgctc ctacaatacc gattgaccgc cttttgggtt cgtattttcg aaatacggcc
    14821 atccgcatca acaagtaaca aatgatgttc ttgtatgcat gagacgacaa ctttccgatg
    14881 agtatgtcgg tgggtgagga tgtcaccgat acgtattctt tccggtagta aatttggggg
    14941 aaggatggca cctgaacggt gaaaagatag atttagattc atggtaatac tccaaaataa
    15001 agggtacacc atgcccattc ggggaagtgt accccgatgg gttaaaagaa atctgcttca
    15061 gaaaaaagca gctgtaccgt acctgaaaca ggcttgcaat caacggctat gcaatgacag
    15121 aaaaaacagt ctgtcagctg tataaaactc ttgaaataca gattctctga gccgttctgc
    15181 aaatatcaaa acgtcttaga gaacctgcaa agcaggttca aatggggatt accctggcta
    15241 atgattacct agtccgcacc gacgaagtaa tcagataatg gtctggatag taataaaacc
    15301 gtaacaatta cgaataattg cgcgcactgg ttatacggct atacgcagac agaagaaacg
    15361 gtctgtcaac cggggaagct tacctgaatg acctatggta gggaggggca ttcaggtaag
    15421 ctgcccaaag ggcagccttc aaacagttgc ttcaaaagca acaaaaataa aaaattcgga
    15481 ttgttaaaga actgtatttt tttactgatg ctcacaatag atatgagcat cgataaaaaa
    15541 acaatattgc tgaaagccaa gtctttgagg ggacttaccc tttgcttcac tataattcag
    15601 gagttgcttg gaaaattaaa ccgccgtttc gacagaggct taattttcca agcaatgagc
    15661 tggaaaacta agaacgggga agcccgaaag cttcctacca ttcttaaata atcaaaatat
    15721 tcaatagctt tctaagaagc atcaggatta ttttgggttt catcttgaga ggatgattga
    15781 taccacatat cgccatccac tttaataaat ttgaatttca acaaccgacc gtcgatactt
    15841 aaagtttcta aaacttcgcc cgtctcacga ttgttagttt caaattttaa aggttgaata
    15901 tcaccggcac ggaaaccgac cacgacagtc gggcgttcac ggtaattttt agacagcaat
    15961 tgcggaaatt cttccaaaag gcgagcaaag agctctttcg cttgacctcc gacgatacga
    16021 agatcgaaac gggttttctc cccattatca cctcgggagg cttggatcgt acaagcataa
    16081 tagttggaag attttctctt tccttgaact tcacgtggcc ggtttaaaaa accgatacca
    16141 tctgcagtca ggttaaagta gttttgatta gattgagtca tgatatatct ccaaaaaaac
    16201 aggggatata tcaatcccaa aggggacagt atatccccaa agggttaagt tgcggctttc
    16261 acggtagccg aactgactta gaagccttaa aggctggctg aaaaagaagt accgtaaatt
    16321 cgacgaatcg aatctcattc atgaacggct aaatgacgag acttttaaga aaagtcacaa
    16381 actacaaaaa caattacaat atattcccga taatttcgta tgtcaatatt ttttcgtaaa
    16441 atctttaacc gcgccaatgc cgaaccctgc cggtatccaa atggacaaaa ctattataga
    16501 taccaatacc gcccacattg tagtatttag ccatttgctc aagctcgcca atgcccaccc
    16561 ccctcatagt aaagtcaact gctttaccac gcatatgaag tgagtttcta gcagcaccct
    16621 caatagtcgc atttcgtctt ggcgttctat atgcactatt gatcgtaatc acagggtttg
    16681 accgtcctga ttgccgtgcc cactcctgca ttgcatacat caggtttaaa agccctacgt
    16741 caatttgaac catggcattt ccatctttcg catcacgcat cagccaacag gcattgcggt
    16801 aagcatcaag atcatatcca ttttgttgct gaaaaaaacg gatttcatgt ttctcgccag
    16861 tatctgcccg tttgcaattg attgtacggt ctcgtgacca aaaatcagcc atactggttg
    16921 ccgctactac atctttaggc aataacaaac cggcagcacc ggtcgtatat agggcgccaa
    16981 cgccgacaaa ctttttcaaa aaatttcttc tatccatctg aaattccaaa ccaatgactc
    17041 caatcaaatt ttaagcaaca ctcagtattg atatgcaaac tttccagtat gctggtagag
    17101 ggcaacatct ttgagcttcc tcaatctctg acagccacaa tatccatcga gcacgttttg
//
LOCUS       DAWXHA010000041        17152 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.041, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000041 DAWXHA010000000
VERSION     DAWXHA010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17152)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17152)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17152
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.041"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            158..280
                     /locus_tag="AABD07_001010"
                     /pseudo
     CDS             158..280
                     /locus_tag="AABD07_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550403.1"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand; the delta' subunit seems to
                     interact with the gamma subunit to transfer the beta
                     subunit on the DNA; incomplete; partial in the middle of a
                     contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
     gene            complement(331..777)
                     /gene="smpB"
                     /locus_tag="AABD07_001011"
     CDS             complement(331..777)
                     /gene="smpB"
                     /locus_tag="AABD07_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HFB2355565.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLKQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(832..1842)
                     /gene="waaF"
                     /locus_tag="AABD07_001012"
     CDS             complement(832..1842)
                     /gene="waaF"
                     /locus_tag="AABD07_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HFB2355566.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKKLHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRELGRRGYDRVIVLPGSLKSAVIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHQSQEDFDGHSGFPEFSID
                     ERRREISIETFGLNLGKPVLAFCPGAEFGPAKRWPARHFAELGKHYSEAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            complement(1973..2048)
                     /locus_tag="AABD07_001013"
     tRNA            complement(1973..2048)
                     /locus_tag="AABD07_001013"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2013..2015),aa:Asn,seq:gtt)
     gene            complement(2239..2991)
                     /locus_tag="AABD07_001014"
     CDS             complement(2239..2991)
                     /locus_tag="AABD07_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HFB2355567.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPYPNLTECEAGQF
                     ERDFWDNIGCAPEEYVRIRRAIRLLELRYPDSLNELVCAAIATPLGEMLAVFGVKGLC
                     LLEFVGQKYLEQEIAAVQKALRGRFVFREDGRMQFLRQELDLYFQCRLKTFATPLEMI
                     GTAFQKQAWDVLLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSVMIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            3341..3898
                     /locus_tag="AABD07_001015"
                     /pseudo
     CDS             3341..3898
                     /locus_tag="AABD07_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273197.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
     gene            complement(3876..4724)
                     /locus_tag="AABD07_001016"
     CDS             complement(3876..4724)
                     /locus_tag="AABD07_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HFB2355568.1"
                     /translation="MPSNYFHTRERLGALGGIVQHHTALYRSVAVYEPTVVIVRRGCK
                     KLRWAGRELRIAAGEAVGLAGGQTFDVINIPDSDGLYQAQWIAFEQETVERFAAQYGT
                     AQAVCDAVKLPHPGRMGAAFDYAAAVLADEEVPHNAAEAALCGVLAWLQHDGIGFAVY
                     GGVNLMRQIRKLITADMAADWSSAMLAQRLNCSEAALRRRLARQDTNFRTLLTDVRMM
                     RALTLLQVTQWSVAQIAGAVGYDCPSRFSARFKELFGCVPSVVRSEAEPAAYRRTGQV
                     SVGVRP"
     gene            complement(5111..6256)
                     /gene="dapE"
                     /locus_tag="AABD07_001017"
     CDS             complement(5111..6256)
                     /gene="dapE"
                     /locus_tag="AABD07_001017"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HFB2355569.1"
                     /translation="MTETQSLELAKALISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPTERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARGELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGSLTVKGKQGHIAYPHLAVNPIHTFAPALLELTQ
                     EIWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTETGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARTAIAETCGVEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYERILARLLAEKAV"
     gene            complement(6369..6989)
                     /locus_tag="AABD07_001018"
     CDS             complement(6369..6989)
                     /locus_tag="AABD07_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase"
                     /protein_id="HFB2355570.1"
                     /translation="MLTPKSCDLFNIPFFQFAQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAADLSEPFAPPHIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTEKYAAFDMWHGAESEYDDYRTVAQQSESDR
                     RLQNDEDFFCIGKHIERDDLGKQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(7023..7532)
                     /locus_tag="AABD07_001019"
     CDS             complement(7023..7532)
                     /locus_tag="AABD07_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFB2355571.1"
                     /translation="MNPFETQSVTFAEPIEMLYACHGKVRRFCGQIAMLSGYIAENGC
                     NQLVLQTIRQISRYFNVAAPLHHEDEEENFFPLLLQYAPQAREGVDELLRQHIGLYDN
                     WAAVSAEFAKLEADNAYIPDAEAFKRFVEGYDVHLAIEEPLFDMGKTFIPEEKLTEIG
                     EIMAARRCK"
     gene            complement(7627..8178)
                     /gene="azu"
                     /locus_tag="AABD07_001020"
     CDS             complement(7627..8178)
                     /gene="azu"
                     /locus_tag="AABD07_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HFB2355572.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAGEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     DYKFACTFPGHGALMNGKVTLVD"
     gene            complement(8461..8883)
                     /locus_tag="AABD07_001021"
     CDS             complement(8461..8883)
                     /locus_tag="AABD07_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HFB2355573.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFDSAAAKLEERHPELAEALEELVRKYGA"
     gene            9015..11765
                     /gene="secA"
                     /locus_tag="AABD07_001022"
     CDS             9015..11765
                     /gene="secA"
                     /locus_tag="AABD07_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HFB2355574.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRVLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSETGHEH
                     AEQILTQMGLLAENDSLYSAANISLMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSRLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDIGDLMQEIR
                     SDAVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLQEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQAIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAAVEEQPVGNIQSIHSES
                     PDIEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            11910..13682
                     /locus_tag="AABD07_001023"
     CDS             11910..13682
                     /locus_tag="AABD07_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HFB2355575.1"
                     /translation="MIPSDFIDELLAKTDIVGIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRHYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLVQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETIDRIFRSALQSEEMEGGGEEDCENFQIGIKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            13869..15797
                     /gene="rpoD"
                     /locus_tag="AABD07_001024"
     CDS             13869..15797
                     /gene="rpoD"
                     /locus_tag="AABD07_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HFB2355576.1"
                     /translation="MSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKICKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEVSAANLAELKQKVIGHFAQIEKDYKKMIGCLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLQWIEEEIAKGRVWSNALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
     gene            complement(15837..16019)
                     /locus_tag="AABD07_001025"
                     /pseudo
     CDS             complement(15837..16019)
                     /locus_tag="AABD07_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708655.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Dna2/Cas4 domain-containing protein"
     gene            complement(16188..16397)
                     /locus_tag="AABD07_001026"
     CDS             complement(16188..16397)
                     /locus_tag="AABD07_001026"
                     /inference="COORDINATES: protein motif:HMM:NF014040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dna2/Cas4 domain-containing protein"
                     /protein_id="HFB2355577.1"
                     /translation="MDTKTGRLKPVEYKRGKPKPDPGDEIQLCAQGLCLEEMTGQTVS
                     EGALWYMQTRHRVPVVFSDGLRPLQ"
     gene            complement(16373..16837)
                     /gene="cas1"
                     /locus_tag="AABD07_001027"
     CDS             complement(16373..16837)
                     /gene="cas1"
                     /locus_tag="AABD07_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas1"
                     /protein_id="HFB2355578.1"
                     /translation="MRKLQNTLYITTQGSYLHKERETLVVEQERKKVAQLPVHSIGHI
                     FCFGNVLVSPFLLGFCGENNVNLAFFTENGCYLGRLQGRQNGNVLLRRAQYRVSEQSP
                     MPIACNIIAAKIRAIRKRARACALSGQCMFWRISWASAAYWIWWKWIQKQAV"
     gene            complement(16897..>17152)
                     /locus_tag="AABD07_001028"
     CDS             complement(16897..>17152)
                     /locus_tag="AABD07_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355579.1"
                     /translation="TRYPLVFNYAISGMGHRLSLEKISISQCPQCGGEMKYYNKPIEW
                     ENIRYSDGSKKRRVTRTTPALECKRNREHWYKVDPAEDKI"
BASE COUNT         4363 a         4886 c         4158 g         3745 t
ORIGIN      
        1 attttagcat aaaactgaac aaaaaatgtc atttagttca aattttctct atttatttct
       61 tatttattaa aagtaaacgt ttgctttttg ctattttgtc aagccggttt gaaaatgtgt
      121 ataattgccc tcgttattta caaaaatttc aggaaaaatg accgcacttt acccttggct
      181 aatgccaatt tatcatcaaa ttgctcaaac ctttgacgaa ggtttggggc atcatgccgt
      241 gctgattaaa gcggatgctg gtttaggtgt agaacgttta cgcatcaggc ggcagccttg
      301 cccgtaccgt ctgaagcatt gtttccacaa tcagcgcgta tgcttaatca accgctgttt
      361 ctcgcgtttc cagtcggctt ccttcatact ttgtcgttta tcgtgctgtt tcttaccttt
      421 tgccaaaccg atttccatct tgatttttcc gcgtgaaaaa tgcaaatcca gcggcacgat
      481 ggtgtaacct gcacgttcgg tttttccgat taacttattg atttccgact gttttaataa
      541 cagtttgcgc ggacgtacgg catccggttt gatgtgtgtc gaagccgtag gcaaagccgt
      601 aatatggcag ccgaccagat aaaacgcatc ttttttccaa tagatataac tctctttaag
      661 ctgtacgcgc gcggcgcgga ttgctttgac ttcccagcct tccaagacca aaccggcttc
      721 aatccggtct tcaatgaaaa aatcgtgaaa tgctttttta ttgttcgcaa tagccataaa
      781 catcctatca atatccgccg tcagacggta taaatccgaa aacagaagcc atcataccgc
      841 ctcttcaacc gcctgcacaa tcttctcggg atacagcctg ttgaggcagt cggtatgccc
      901 caacgggcat tcacgtttga aacagggcga acattccaag tgcaggctga cgattttcgc
      961 cctgtcgctc aaaggcggcg tatgcgtcgg gctggaagaa ccgtaaaccg ccactacctt
     1021 cctgcccaaa gcagccgcca aatgcatcag cccgctgtcg ttgcacacga ccgtgtccgc
     1081 caacgacagc aaatccattg cctgcgacaa atcggttttg ccgcacaaat tgacacacat
     1141 gccgtctgaa aggcagttga tttcttcggc gatttcatca tctttttgcg aaccgaacaa
     1201 ccaaacctgc caacccgcct ccgaatagtg tttgcccaac tcggcaaaat gccttgccgg
     1261 ccaacgcttt gccggcccga attccgcacc cgggcaaaaa gccagaacag gctttccaag
     1321 attcaaaccg aaagtttcaa tagaaatttc ccgccgccgt tcatcaatgg aaaactcggg
     1381 gaatcccgaa tgcccgtcaa aatcttcctg actctgatgc gcgagagccg tatatcggtc
     1441 caccatcaaa ggcagacgtt ccttatccag cctgcgtata tcgttcaaca gaaaataacg
     1501 gctttcgccg acataacccg ttctttttcc gatgcccgtt gccagcgcga tgactgccga
     1561 cttcaaagaa cccggcaaca cgataaccct gtcgtatccg cgccgtccca actccctgcc
     1621 gacccgccaa cggcgtttca gctccaacgc accgtgtccg aacggatttt caagaatctc
     1681 attcacttcc ggcatacgct cgaacaccgc catcgaccac ttcggtgcga acacatcaat
     1741 cgtgcaaccg ggatgaagtt tcttcaaacg gcggaacaag ggctgggtca tcacgcagtc
     1801 gcctatccaa ctgggagaaa taatcaggat tttgatagac ataaaacgaa accgaaatca
     1861 gacaggcaga attttaccgc gaaaccgttg gaaaacctat ctcgccgcat tccgagcgcc
     1921 ggacgtgcaa atgtgaaaaa gcccgaacat tcaagttcgg gcttcaaaat tctggctccc
     1981 cgacctgggc tcgaaccagg gacctgcgga ttaacagtcc gtcgctctac cgactgagct
     2041 atcggggaat ggggcgtatt atagcatccg gaaaaaatgt gtcaatcctt aattttggaa
     2101 aaatgggcga caaaacgaca agcatatgaa tcagaaagac attaagaccg atgccttaaa
     2161 aggattgccg ttgtatgaat tttcacagcc gtcatcacac catatttaag cccgatgagc
     2221 cgttctgcat ttccccgctt aaaacaatgc cgtctgaact tcgccgcgtt ccaaagccag
     2281 taaaaactgt ttgcggttca acccgcccgc gtagccggtc agtttgccgt cgctgccgat
     2341 gacgcggtgg cagggaatca tgacagacac cttgttctgc ccgttggcgg cggcaacggc
     2401 gcggacggct ttggggttgc ccaaacgctg cgcctgctcc ttataactgc gcgtttcgcc
     2461 gtaaggaatc gccaaaagca cgtcccacgc ctgtttttga aacgccgtac caatcatttc
     2521 caagggcgtg gcaaaggttt tcagacggca ttggaaatac aaatccaatt cctgacgcaa
     2581 aaattgcatc cgcccgtctt cccgaaacac aaaccgtccg cgcaaggctt tttggacggc
     2641 ggcaatttcc tgttccaaat acttctgtcc gacaaactcc agcaggcaca atcccttaac
     2701 gccgaacacc gccaacatct cgcccaaagg cgtggcaata gcggcacaca ccagctcgtt
     2761 caagctgtcg ggataacgta attccaacag acggatggcg cggcggatac ggacatattc
     2821 ttcaggcgcg cagccgatat tgtcccaaaa atcccgctcg aactgcccgg cttcgcattc
     2881 cgtcagattg ggatacggca taacgccgca ctcaaaaacc cgggtttcga ggcaatggcg
     2941 gatttcatcc cattttgacg gcagattgtt taaggaaggc agggtaatca ttcgtttgct
     3001 ccgtatccct atcataaatt tgacggcgaa atccccgatt tccgccattc ccgcacgccg
     3061 gtacaggaac aggctgcggc ggaaaccttg agggtctggt tgcggcaatg cctaaatata
     3121 caatatttcc aaagcatcag ggaaaggaat gtttcaacac acaggacgac acataaagcg
     3181 tcgccctatg aaaaatttca gacggccttc aaagggtcgt ctgaaaccac gatttttgca
     3241 tttgcgcatt ccggcacatc atccaaccgt ttcggcacat tcctgccgcc gttgacagcc
     3301 tataatgaat ccacttattc atcaagcaaa ggaatcatct atgcaaaccc gcatcctctc
     3361 cgccgtactg ctggcttttt caaccgctgc ctttgccggg ggcgcattca cgctgcaatt
     3421 cgacaacccg tccgaagacg gcggcttcac gcaaaaccag cttttgagcg cgccttacgg
     3481 cttcggctgt tcgggcggca atgcttcgcc cgcgctgtcg tggtaaaacc cgcccgcagg
     3541 gacaaaaagt ttcgtcctga ccgtttacga taaagacgca ccgatcggtc tggaccggat
     3601 gcactgggtg gtcgccgaca ttcccgccga tgtccgccgc ctgcccgcag gcattaccgc
     3661 acaatgaggc aggccgccca aaggcgcgct gcaaacccgc acggacttcg gcgcgccggg
     3721 ctacggcggc gcgtgtcctc ccgaaggcag gaaacaccgc tacgaattca cgcttaccgc
     3781 gctgaaagtc gccaagctgc cgaacatcac cgccgaatcc acacccgtgc tggtcggttt
     3841 ctccactaag gcaaacagct tgggcgaagc gaaattcacg gtcgaacacc gacgctgacc
     3901 tgccccgtgc gccgatatgc cgccggctcc gcttccgagc ggaccaccga cggtacgcaa
     3961 ccgaacagct ctttgaagcg cgcgctgaaa cgggacgggc agtcatagcc aaccgcgccg
     4021 gcaatctgcg ctaccgacca ttgcgtaacc tgcaacagcg tcagcgcgcg catcatgcgt
     4081 acatccgtca gcagcgtacg gaaattcgtg tcctgccgcg ccaaccgccg ccgcaacgcg
     4141 gcctcgctgc aattaagccg ctgcgccagc attgccgacg accagtccgc agccatatcg
     4201 gcagtaatca gtttgcggat ttgccgcatc aggttgacgc ctccgtacac ggcaaaaccg
     4261 atgccgtcat gctgcaacca cgccaacacg ccgcaaagcg cggcctccgc cgcattgtgc
     4321 ggcacttctt catccgccag taccgcagcc gcataatcaa acgccgcgcc catacgcccg
     4381 gggtgcggca gcttcaccgc atcgcacact gcctgcgccg tcccgtattg tgcggcgaac
     4441 ctttctacgg tttcctgttc gaaagcaatc cattgcgcct gatagaggcc gtctgaatcg
     4501 ggaatattga tgacgtcaaa cgtctgcccg cctgccaagc cgacagcctc acccgccgca
     4561 atcctcaatt cgcgccccgc ccaccgcagc ttcttgcatc cgcgccgcac gataaccacg
     4621 gtcggttcat ataccgccac gctgcggtac aaggcggtat gatgttgcac gatgccgcct
     4681 aaagcaccca atcgttcacg cgtatgaaag taatttgacg gcacggttat attcctcaat
     4741 gtttcaacac acagggccgc acataaggcg cagccctgtt taccctgatt tggaaggggt
     4801 tacttcccaa aaaataaacc aaaattctac tgccctgaag ggcagggttt caaccatatt
     4861 ccgtcggtgt gcctgcaact tagctccctc ccctgtgggg agggtcggag ggagggtaaa
     4921 acgtggcaga tacagacaat atttccgtta ccgtcccaat gccctctccc taaccctctc
     4981 ccacgggaga gggaatggat taccgttcaa ataaatcgct ctacataaaa atcaatgcgt
     5041 tatctcaaac tcatgttggg tctaatcaga ttgtcggaca tccatatccg acaaccagcc
     5101 catctttttt tcagacggcc ttttcagcca acaaccgcgc caatatcctc tcatacaccg
     5161 ccgacagctt cggaatatcg tccagccgca cattttcgtt gatttggtgg atggtggcat
     5221 tggacgggcc taattcgatg agttctttcg caatggcttt aatgaagcgt ccgtccgaag
     5281 tgccgccggt ggtggacaat tcggcctcaa cgccgcaggt ttcggcaatg gcggtgcgtg
     5341 ccacgtcggt cagtttgccc gcgtgggtca ggaagggctg tcccgaacac gaccactgca
     5401 aatcgtattg cacgccgtgt ttgtccaaaa tggcgtggac gcgttgtttc agccctgttt
     5461 cggtggactc tgtggagaag cggaaattga atttgacgtt caactcgccc ggaatgacgt
     5521 tggtcgcgcc tgtgccgccg ttgatattgg aaatttgaaa gctggtcggc gggaaatatt
     5581 cgttgccttc gtcccaaatt tcctgcgtca gctctaacaa ggccggggca aaagtatgta
     5641 tgggattcac cgccaaatgc ggataggcga tatgcccttg cttgcctttg acggtcaggc
     5701 tgcccgacag cgagccgcgc cggccgtttt taatcatatc gcccaatttg tccacggcgg
     5761 tcggttcgcc gacgatgcag tagtcaatca actctccgcg tgctttcaac acatcgacga
     5821 ctttggtcgt gccgtccagt gcatcgccct cttcgtcgga agtaatcaag agtgcaatgc
     5881 tgccttgatg gtcgggatgt tcggcaacaa agcgttcgca ggcggtaacg aaacaggcga
     5941 tgctggtttt catgtccgcc gcgccgcgcc cgtataatct tccgtcgcgc tcggtcggtt
     6001 cgaacggggg cgaatcccat ttttcaacag gacctgtcgg cacaacatcg gtatgccctg
     6061 caaaacagac gacgggagct ttcgtgccgc gtcgcaacca gatgtttttg gtgtcgccga
     6121 aatggagttc ttcagccgca aaaccgattt tgtgcaggcg ttcggcaagc agtttttggc
     6181 aatctcggtc gtcgggggta acggacgggc gggaaatcaa cgctttggcg agttctaggg
     6241 attgggtttc ggtcattttg ttcactttgg aaatcaggtc gtctgaaatg tcctgaagct
     6301 gattttcaga cgacctccgg gttggattgg tgtataagac gggcattcgt acccgtcagt
     6361 tttctgaatc atttgccgtg acaggcttcg taaagcggca gtaaatcttc caccgtttcg
     6421 gctatccatt ttgctacatc ctgcttgccc aaatcgtcgc gctcaatgtg tttgccgatg
     6481 cagaaaaagt cttcgtcgtt ttgcaacctt cggtcggatt cgctttgttg tgcgacggtg
     6541 cggtagtcgt catattcgct ttccgcgccg tgccacatat cgaatgcggc gtatttttcg
     6601 gtatcgaaat catccagcca gcggttgtac tcgggcagcg caatcggcga cacgtcggct
     6661 ttgtagcaat gccagtccaa gctgacgctc aggcggcggc ggttgagcag tatcgacagg
     6721 atggcggcgg aatttttgta ttgggcgtat ttgaagtagg cgaagaaatg ggcgcgaacc
     6781 tgccagccgt tacaccagcg ttcgatatgc ggcggggcga aaggttcgct caaatctgcg
     6841 gcgacctgct gtatcaactg ctgccatatc tgccagtttt ccttgtagtc ggctttgatt
     6901 tgcggaatgc tctcgggctg gtattttttg agctgggcaa actggaaaaa cgggatattg
     6961 aacaaatcgc agcttttggg cgtcagcata atatatcctt gagacgattg tttcagacgg
     7021 cattatttgc accggcgcgc cgccatgatt tcgccgattt cggtcagctt ctcttcgggg
     7081 ataaacgttt tgcccatgtc gaacaaaggc tcttcaatcg ccagatgcac atcatatccc
     7141 tccacaaagc gtttgaacgc ttccgcatcg gggatataag cgttgtctgc ttcgagtttg
     7201 gcaaattcgg cggaaacagc cgcccagttg tcgtacagcc cgatatgttg gcgcaacagc
     7261 tcgtccacgc cttcacgggc ttgcggcgcg tattgcagca gcagcgggaa aaagttttct
     7321 tcttcgtcct catggtgcag cggcgcggca acgttgaaat accgggagat ttggcggatg
     7381 gtttgcaaaa caagctgatt gcagccgttt tcggcgatat agcccgacaa catagcaatc
     7441 tggccgcaaa aacggcgcac tttgccgtgg caggcataca gcatttcaat cggttcggca
     7501 aaggtaacgc tttgggtttc aaacggattc atgttttcgt tctcaacggg gacttttcaa
     7561 gcagtcattt tataataaaa cagcctgcac aaagcaggct gtctgtcttt tgaaacttta
     7621 agcggattaa tcgaccaaag tcactttgcc gttcatcaaa gcaccgtgac ccgggaaggt
     7681 gcaggcaaat ttgtagtcgc cgtcagccaa tttggcagga tccaaagtca gggaagactc
     7741 ttcgccgccg ccgatcagtt tggtgtgggc aacaacgcgc gcatcgtcag gtttgacata
     7801 gtcggtatcg gcagcaccta cgccgtcttt aaatacgccg tccatgtctt cagctttggc
     7861 aatcacaagg ttgtgaccca tgctggcttt gggttgcgta ccggtatgtt tcagagtgat
     7921 ggtgaactct ttacatgctt tgctgacttg gatgtctttg gtgttgaact gcatattgtc
     7981 gttggattcg acagttgccg cacagttgcc ggcagcaggg gcttcggcag catctgcagg
     8041 agcagcttcg gcggcaggcg cttcggaagc gggtgcttca ccggcaggag ttgcctcggc
     8101 agcaggcgcg gcaggttctt gagagcaggc agccaaaccg ataacggcgg cagaaatcag
     8161 agccagataa gctttcatgg taaatctcca atcgataaaa taatattcgg ttttacggaa
     8221 atcaaagtgc aaccgccatt aacaaaacct tgaaaaagat tccgccgtgt tgcacaaaca
     8281 gatgtttcgg ggcggcattt tgctacaaac ttcatttgaa atcaaagcct gtttgcaagt
     8341 ttacaatcgt ttacccaaaa aaagggcaat cttaccccga acctatttct ttaatattag
     8401 ggcagccgtc ccccgccgcg caaatattaa cggatattta caacatccct gccggccgcc
     8461 ttatgccccg tacttcctga ccagctcctc cagtgcctcc gccaattcgg gatgccgttc
     8521 ttccaacttt gccgccgccg aatcgaaact ctccaacgca gccttactca aatgcagggt
     8581 attggttttc ggcggttttt ccggttttgg aaccagcctg accgaaacag accgtatcga
     8641 agcatcaagc cctgccagct gcggcaatac cgacggggca atcatcttca aacgcgatgc
     8701 cgccatattg tttgccgcca aaaggacaag cctgccgtct tcgatacatg ccgtctgaaa
     8761 gtgggggtgc aggttggcag gcagcagttt tttcacggca gcatccaacc gccgccactg
     8821 tcccgcctgt ttcaaaagtc cggaaagcag cgcgtcccgc ctgcccaact gttccaaatt
     8881 cataaaacat acaccccaaa agattgaaat accgcaaacg cgcctttatt tcagacggca
     8941 ttagcacttt gcacaaacgc ttgtgttaaa atcgcgtttt cgccccacta ttatatcagg
     9001 cgcaggaatt attcatgctg acaaacattg ccaagaaaat cttcggcagc cgcaacgacc
     9061 gcttgctgaa acaataccgt aaatccgttg ccagaatcaa cgcgctcgaa gaacagatgc
     9121 aagccctaag cgatgctgat ctgcaagcca aaactgccga attcaaacaa cgcctcgccg
     9181 acggtcagac tttggacggc attttgcccg aagccttcgc cgtctgccgc gaagcgtccc
     9241 gccgcgtact cggtatgcgc cacttcgacg tgcagcttat cggcggtatg gtgctgcacg
     9301 acggcaaaat cgccgaaatg cgtaccggcg aaggcaaaac cctggtcgcc accctcgccg
     9361 tctatctcaa cgcgctggcc ggcaaaggcg tgcacgtcgt taccgtcaac gactacctcg
     9421 cctcgcgcga cgcaggcatt atggagccgc tctacaattt cctcggtctg accgtcggcg
     9481 tgattatttc agatatgcag ccgttcgacc gtcaaaacgc ctacgctgcc gacattacct
     9541 acggcacgaa caacgaattc ggcttcgact acctgcgcga caatatggta accgaccaat
     9601 acgacaaagt gcagcgcgaa ttgaattttg ccgttgtcga tgaagtggac tccatcttga
     9661 ttgacgaagc gcgcaccccg ctgattatct ccggtcaggc agacgacaac atccagctct
     9721 accaaatcat gaacaccgtt ccgccccacc tcgtccgtca agagacagaa gaaggcgaag
     9781 gcgactattg ggtcgacgaa aaggcacatc aggtcatcct gagcgaaaca ggtcacgaac
     9841 acgccgaaca aatcctgacc caaatggggc tgctggcaga aaacgactcg ctgtactcgg
     9901 cggcaaatat ctccctgatg caccacctta tggcagcatt acgcgcgcac tcgctgttcc
     9961 acaaagacca acattacgtt atccaagacg gcgaaatcgt catcgttgac gaatttacag
    10021 gccgtctgat gtccggccgc cgctggtccg aaggcctgca tcaagccgta gaagccaaag
    10081 aaggcgtgga aatcaaacgc gaaaaccaaa ccctcgcctc catcaccttc caaaactatt
    10141 tccgcctgta caccaagctc tccggtatga ccggtacggc agataccgag gctttcgagt
    10201 tccaaagcat ctacaacctc gaaaccgtca tcatcccgac caaccgcccc gtacagcgca
    10261 aagacttcaa cgaccagatt ttccgttccg ccgaagaaaa attcgaagcc gtcgtcaaag
    10321 acatcgagga atgccacaaa cgcgggcagc ccgtcctcgt cggtacgacc agcatcgaaa
    10381 actccgaact ggtctcccgc cttctgcaaa aagccggact gccgcacaac gtcctcaacg
    10441 ccaaagaaca cgaacgcgaa gccctgattg tcgcccaagc cggcaaagtc ggcgcaatta
    10501 ccgtcgccac caatatggcg ggacgcggta cggacatcgt tttaggcggc aacctgaagc
    10561 accaaaccga tgccatccgc gccgacgaaa ccttgagcga cgaagagaaa caggcacaaa
    10621 tcgccgcact cgaaaacggc tggcaggcag aacacgataa agtgatggaa gcaggcggtt
    10681 tgcacatcat cggtacggaa cgccacgaaa gccgccgtat cgacaaccag ttgcgcggac
    10741 gttccggccg tcagggcgac cccggatcca gccgtttcta cctctcgttt gaagacccgc
    10801 tgttgcgcct cttcgcactc gaccgcgccg ccgccatcct caaccgcctc gcccccgaac
    10861 gcggcgttgc catcgagcac aacctgctga cgcgccaaat cgaaggggcg caacgcaaag
    10921 tcgaaggcag aaacttcgat atgcgcaaac aggttttgga atacgacgac gttgccaacg
    10981 aacagcgcaa agtcatttac agccagcgca acgaaattct gaccagcaaa gacatcggcg
    11041 acctgatgca ggaaatccgt tctgatgccg tcagcgacct cgtggatacc tatatgccgc
    11101 ccgacagcat ggaagaacaa tgggacatcc cgacactgga aaaccgcctg gctgccgaat
    11161 tcaggcttca ggaagacatc caatcctggc tgaaggcgga caatgcgatt gacggtcaag
    11221 acatcaaaga gcgcctgatc gaacgtatcg aaaacgaata tgccgccaaa accgaactgg
    11281 tcggcaagca ggcaatggct gatttcgagc gcaacgtgat gttgcaggcc atcgacaacc
    11341 aatggcgcga acatcttgcc gccatggact acctgcgaca aggcatacac ctgcgcagct
    11401 atgcccagaa aaatccgaag caggaatata aacgcgaagc ctttaccatg ttccaagacc
    11461 tgtggaacgg catcaaattc catatcgcct ccctgcttac ttcggttcaa atcgaacaaa
    11521 accctgtcgc ggcggttgaa gagcaacccg tcggcaacat ccagtccatc cattccgaat
    11581 cgcccgatat agaagaactt ttgggtcagt cgcaaaccga tctggttacc gaagccttta
    11641 atcccgatgg gacggatttc agccccgaag ccttggaagc gcggggacaa atcgtccacc
    11701 gcaacgaccc ctgcccctgc ggcagcggtt tgaaatacaa acaatgccac ggcaaattgg
    11761 cttaagcgtt tgaacgcaaa tgccgtctga acatccggtt tccggcttca gacggcattt
    11821 tgcctgaacc gccacatccg accgccattc cgaaaaatcc cgatttcgta ccgtccgtac
    11881 cgaaaacaga catcccgtcc ccccacatca tgattccatc cgacttcatt gacgagcttc
    11941 tggccaaaac cgatattgtc ggcatcatcg acgagcaggt tccgctgaaa aaaggcgggg
    12001 cgaactatat ggcgtgttgc ccgttccaca aggaaaaaac accgtcgttt tcggtcagtc
    12061 cgaccaagca gttttatcat tgtttcagtt gcggggcgca tggttcggcg attggttttg
    12121 tgatggaaca tcagggactg tcgtttccgg aggcggttca gttccttgcc gaccgcgtag
    12181 gtatgattgt gcctaaagtg cgcgggcaga acgataatcc cgaagtccgt gccgagcgca
    12241 agaaaaaaca gcagacgctg gaagaaacga cggcggcggc agctgatttt tacgcgcagc
    12301 agctgaaatt caatccggct gcgaaagctt atttggacaa acgcggcttg agcgcggaag
    12361 tcatcgcgca ttatggtttg ggctacgcgc ccgacggctg gcagcctttg gcgcaagtgt
    12421 tccaaccgta tccgaatacc gcgttggtgg atacggggat ggtgattgac aatgaggggc
    12481 ggcattacga ccgcttccgc catcggatta tgttccccat ccgcaatccg cgcgggcagg
    12541 tcatcggttt cggcggcagg gtgctggacg actcgaaacc gaaatatttg aattcgcccg
    12601 atacgccttt gttcgataag gggaaaaacc tttacggctt gtatgagggg cgtgctgctg
    12661 taaaagaggc agaacggatt ttggtggtcg aaggctatat ggacgtggtc gcgctggcac
    12721 agttcggcgt gggctacggt gtggcggcct tgggcacggc gacgacggcg gaacacgtca
    12781 aaatcctgat gcggcaggcg gacagtattt atttctgttt cgacggcgac agcgcggggc
    12841 gaaaagcggc ttggcgcgcg ctggaaaacg cgctgccgca gttgaaagac gacaaatcgc
    12901 tgcatttttt attcctgccg gaagaacacg accccgacag ctacatccgc gcctacggca
    12961 aagcgcaatt tgaagacgcg cttctgaatc aaagcaagcc tttgtcggaa tatttctggg
    13021 aacacctttc agacggcatt catctcaata cgcaggaagg caaggcggaa ttggtgaaaa
    13081 ccagttcgcc gcttttggtg cagattaccg caccggcatt ggcttatttg ttaaaacaac
    13141 ggcttagcga gctggtcggc atcgaccccg acaacctcgc gcaactgctc ggacaggaag
    13201 cgccaaagcg gcacgtcaaa caaaaaaact acaaactgcc tccgatttcc gtcaaacagc
    13261 ccgttatgcc gacattggtg caacggcaaa tccgcagcct cttgataaat ccggattggg
    13321 ctgcatatat agacctgccc gattatctgg cgttggacgg cgatttcgcc tgccttgcca
    13381 acctcgccga aaccattaaa aaccatcctt ccgtgccggc aaccgcacag gttttggaac
    13441 atatgcgcgg ttcgccctac gaagaaacaa tcgaccgcat cttccggtcg gcccttcaat
    13501 cggaagaaat ggaaggcggc ggcgaagaag attgcgaaaa cttccaaatc ggcatcaaaa
    13561 aactgctcaa tgagttaaaa tacagccaaa ttgaaacatt aaaacaaaaa agcctgcaat
    13621 ccggcttaaa tgaaagcgag aaaaaacttt tgctgtcgct gctgaccgca aaacaaaatt
    13681 gaccggcgga ttccgccatc tgtaaaccgt tatgccgtct gaaaagcatt caccccggct
    13741 gcaacaacga cacctgcaga acacccatcc caaaaagcct tcagacggca tcagagtacc
    13801 ctactttgcc acgccttcag gtgcgtccaa acgcaaaccg tcggcatctt gccaacagaa
    13861 agcagacaat gtccaaaaac caaaatcacg aagaatacca agacgatgcc cgccccctga
    13921 cgattgagga acaacgtgcg cgcctgcgcc aactcatcat tatgggcaaa gaacgcggct
    13981 acatcaccta ctccgaaatc aacgacgcac tgcccgacga tatgtccgat gccgatcaaa
    14041 tcgacaacat cgtcagtatg atttccggtt tgggtatcca agttaccgaa cacgcccctg
    14101 atgcggaaga catattgtta agcgacaatg ccgccgttac cgacgatgat gccgtcgaag
    14161 aagccgaggc cgccctttcc agcgcagatt ccgagttcgg caggacgacc gaccccgtcc
    14221 gtatgtatat gcgcgaaatg ggacaggtcg acctgctgac ccgcgaagac gaaatcatca
    14281 tcgccaaaaa aatcgaaaac gccctgaaaa atatggttca ggccatctcc gcctgcccgg
    14341 gttccattgc ggaaatctta gaactcatcg aaaaaatctg caaagacgaa atccgcgtcg
    14401 acgaagtcgt agaagccatt atcgacccga atgaagtatt gctcaacgaa ttgggcttgg
    14461 ggcacttgga aaccacagca cccgagaaac cttccaacga caattcggac gaaaacgaag
    14521 acgacgaaga atcggaagaa gatgcggatg aagtctcggc agccaatctc gccgaattga
    14581 aacaaaaagt catcggccac tttgcccaaa tcgaaaaaga ctacaaaaaa atgatcggct
    14641 gtttggaaaa acaccacagc cggcacaaag actatctcgc ctaccgcgac gcgattgcca
    14701 acaaactgct ggaagtccgt ttcgccaccc ggcaaatcga cagcctcagc agcagcctgc
    14761 gcggaaaagt agaaaacatc cgcaaactcg aacgcgaaat ccgcgacatc tgcctcgacc
    14821 gcgtccatat ggaacgcgac tacttcatcc aaaacttcct gcccgaaatc accaatctgc
    14881 aatggattga agaagaaatc gccaaaggca gggtttggag caacgcactc gaccgcttcc
    14941 gccacgccat cctcgaaaaa caaaccgagt tggcggatat ggaaaaagaa acccgcattt
    15001 ccatcgaaga gttgaaagaa atcaacaaaa atatggtgtc gagcgaaaaa gaaaccgcag
    15061 ccgccaaaca ggaaatgatt caggcaaact tgcgcctcgt catttccatt gccaaaaaat
    15121 acaccaaccg tggcttgcag ttccttgatt tgattcagga aggcaacatc ggcctgatga
    15181 aggcggtcga caagttcgaa taccgccggg gctacaaatt ctccacctac gcaacctggt
    15241 ggatccgcca ggcaattacc cgctcgattg ccgatcaggc gcgtaccatc cgtattccgg
    15301 tacatatgat tgaaaccatc aacaagatga accgcatctc gcgccaacac cttcaagaaa
    15361 ccggcgaaga acccgattcc gccaaacttg ccgaactgat gcagatgccc gaagacaaaa
    15421 tccgcaaaat catgaaaatc gccaaagagc cgatttcgat ggaaaccccc atcggcgacg
    15481 acgacgattc gcacttgggc gacttcatcg aagatgccaa caatgttgcg ccggccgatg
    15541 cggcaatgta caccagcctg cacgaagtaa ccaaagaaat cctcgaaagc ctgacaccgc
    15601 gtgaggcaaa agtcctgcgt atgcgtttcg gcatcgatat gaacaccgac cacacgctgg
    15661 aagaagtcgg cagacagttt gacgtaacgc gcgaacgcat ccgtcaaatc gaggcaaaag
    15721 cactccgcaa gctgcggcat ccgacaagaa gcgaccgttt gagaagtttc ttggacagcg
    15781 aagacagcaa gctgtaaacc aaaaaaccgc aggtttcaaa tacctgcggt tttttcttac
    15841 acaataaaca acgcttccac atatcccaca ctcccatccc gtttcgccaa caactccggc
    15901 tgacagattt ccaccagaga gcaggctttg cagcgtttgc cgtagtcggg cggcggggtt
    15961 tgtccgctgt ttaagagttc gcggacggcg gctatagttg cgagggtttg ggcgcgtagg
    16021 ccgagacctt tgcaaaaata gtctgttaac gaaatttgac gcataaaaat gcgccaaaaa
    16081 attttcaatt gcctaaaacc ttcctaatat tgagcaaaaa gtaggaaaaa tcagaaaagt
    16141 tttgcatttt gaaaatgaga ttgagcataa aattttagta acctatgtta ttgcaaaggt
    16201 ctcaggccgt ctgaaaacac gacggggaca cggtggcggg tttgcatata ccacagcgcg
    16261 ccctcagaga cggtttgccc cgtcatttct tccaagcaca agccttgggc gcaaagctgg
    16321 atttcatccc ccgggtcagg tttgggcttg cctcgtttgt attccacagg tttcagacgg
    16381 cctgtttttg tatccacttc caccaaatcc aatatgccgc tgatgcccag cttatccgcc
    16441 aaaacatgca ctgtccactc aaagcgcacg cccttgcacg tttccggatc gcccgaatct
    16501 ttgccgcaat gatattgcac gcaatcggca tgggactttg ctccgacacc cgatactgcg
    16561 cccgacgcaa cagcacattg ccgttctgcc gcccctgaag ccgtcccaaa taacacccgt
    16621 tttcggtaaa aaacgccaaa ttcacattat tttcgccgca aaaccccaac agaaacggcg
    16681 acacaagcac attcccaaaa cagaaaatat gcccgatgga atgcaccggt aactgcgcca
    16741 ccttcttacg ctcctgctcc accaccagtg tctcccgctc cttatgcaga tagctgcctt
    16801 gggtggtgat gtagagtgtg ttttgcagtt tgcgcatggg aaaactcctt aggttttgac
    16861 cgtgcttttg gggttaaacg aggggctagc taaaaattag attttatctt ctgccggatc
    16921 aactttatac caatgctcac gatttctttt acactctaat gctggtgtag ttcttgttac
    16981 ccttcttttc ttgctaccat cagaataacg tatattctcc cactcgattg gcttattata
    17041 atatttcatt tctccaccgc actgtggaca ttgagaaata ctaattttct ctagacttaa
    17101 acgatgcccc ataccgctaa tagcataatt aaaaactaat gggtatctag tt
//
LOCUS       DAWXHA010000042        17126 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.042, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000042 DAWXHA010000000
VERSION     DAWXHA010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17126
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.042"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            373..1506
                     /locus_tag="AABD07_001029"
     CDS             373..1506
                     /locus_tag="AABD07_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355580.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNTFVAKLARLFRNADRAVVIVKESMRTEESLAETVDDGPLQSEKDYLALAIRLSRL
                     KEKAQWFHVTEQEHGEEVWLDYYIGEGGLVAVSLLQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDYVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADMQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLEDLEKEVSRYAEAAARRSGGRRDLSH"
     gene            1513..1833
                     /locus_tag="AABD07_001030"
     CDS             1513..1833
                     /locus_tag="AABD07_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355581.1"
                     /translation="MPSETGFQTALESQTLFAMPYMPNPVRYKLKTTIQKTEIHIIKQ
                     TNKLTYCAILRAVPYFPVLYMSGRHPHKRRDTDKEKSLGIKNILINQYKSNKQFIIFF
                     SVGV"
     gene            complement(2009..2284)
                     /locus_tag="AABD07_001031"
     CDS             complement(2009..2284)
                     /locus_tag="AABD07_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFB2355582.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAIHTAGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALKQEIAVKKLTAAQKRQLWEQGEKMLSET"
     gene            complement(2281..3564)
                     /locus_tag="AABD07_001032"
     CDS             complement(2281..3564)
                     /locus_tag="AABD07_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFB2355583.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFASGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAHEPVLPPSVPKTLKQTVVEPF
                     KEFFMRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAITVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWMG
                     YVPFFRLCFILALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(3713..5131)
                     /gene="glnA"
                     /locus_tag="AABD07_001033"
     CDS             complement(3713..5131)
                     /gene="glnA"
                     /locus_tag="AABD07_001033"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HFB2355584.1"
                     /translation="MSIKNAVKLIEKSKARFVDLRFTDTKGKQHHFTVPARIVLEGPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDCGQDLRSAMVNILEGLGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            5442..6251
                     /gene="aroE"
                     /locus_tag="AABD07_001034"
     CDS             5442..6251
                     /gene="aroE"
                     /locus_tag="AABD07_001034"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HFB2355585.1"
                     /translation="MHALPRYAVFGNPAAHSKSPQIHQQFALQEGVDIEYGRICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSDRALAAGAVNTLVWLEDGRIRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELARLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVSPKIFRDCRLAYDMVYGEA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFKPDIRPVIEHMKAL"
     gene            6254..6955
                     /gene="mtgA"
                     /locus_tag="AABD07_001035"
     CDS             6254..6955
                     /gene="mtgA"
                     /locus_tag="AABD07_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HFB2355586.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWMPYKRISTNLKKALIASEDVRFAGHGGFDWGGIQNAIRRNR
                     NSGEVKAGGSTISQQLAKNLFLNESRNYLRKGEEAAITAMMEAVTDKNRIFELYLNSI
                     EWHYGVFGAEAASRYFYKKPAADLTKQQAAKLTALVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(7229..7304)
                     /locus_tag="AABD07_001036"
     tRNA            complement(7229..7304)
                     /locus_tag="AABD07_001036"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7269..7271),aa:Phe,seq:gaa)
     gene            complement(7495..8229)
                     /gene="lptB"
                     /locus_tag="AABD07_001037"
     CDS             complement(7495..8229)
                     /gene="lptB"
                     /locus_tag="AABD07_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HFB2355587.1"
                     /translation="MSANNSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGA
                     GKTTGFYMIVGLIAADAGSVMLDGRELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIGHLRRNPAPSLSGGERRRVEIARVLAMKPR
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGAV
                     LASGKPDDLVGNEQVRAVYLGENFKY"
     gene            complement(8300..8830)
                     /gene="lptA"
                     /locus_tag="AABD07_001038"
     CDS             complement(8300..8830)
                     /gene="lptA"
                     /locus_tag="AABD07_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HFB2355588.1"
                     /translation="MIQKICKLFVLIVIFATSPAFALQSDSRRPIQIEADQGSLDQAN
                     QSTTFSGNVIIRQGTLNISASRVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVTYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTINGSTKSGAKSASKT
                     GRVSVVIQPSSTQKTE"
     gene            complement(8811..9392)
                     /gene="lptC"
                     /locus_tag="AABD07_001039"
     CDS             complement(8811..9392)
                     /gene="lptC"
                     /locus_tag="AABD07_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HFB2355589.1"
                     /translation="MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPENSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGRRQAGKVETEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYNHKTGMLNFSSKVKAAIYDTKDM"
     gene            complement(9389..9925)
                     /locus_tag="AABD07_001040"
     CDS             complement(9389..9925)
                     /locus_tag="AABD07_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFB2355590.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDDGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQA
                     GLEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIIRAKGTLGAALNGYIK"
     gene            complement(9991..10965)
                     /locus_tag="AABD07_001041"
     CDS             complement(9991..10965)
                     /locus_tag="AABD07_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HFB2355591.1"
                     /translation="MAENEKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSG
                     ESDEITAIIPALKRKDITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLTGALNMHDLLAARIV"
     gene            11062..12117
                     /gene="tal"
                     /locus_tag="AABD07_001042"
     CDS             11062..12117
                     /gene="tal"
                     /locus_tag="AABD07_001042"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HFB2355592.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEVAALKRQNLSPKQRYETMAVADVRAACDVCLAEHESTGGKTG
                     FVSLEVSPELAKDAQGTVEEARRLHAAIARKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIQVVASFFISRVDSALDATLPDRLK
                     GKTAIALAKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGVHTVNTVPDATLKAFIDHGTAKATLTESADEARARLAEIAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            12268..12558
                     /locus_tag="AABD07_001043"
     CDS             12268..12558
                     /locus_tag="AABD07_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355593.1"
                     /translation="MAKALEIISPDEIYSDLIFKDPVPPHTIYTELMKLVGRNAGNER
                     IADRAFDFFSPALMDDSATEEQYNALYDLTLLEEPGMELDKDEITALINSLK"
     gene            12575..13462
                     /locus_tag="AABD07_001044"
     CDS             12575..13462
                     /locus_tag="AABD07_001044"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HFB2355594.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVTYQSRRYALYEETLYRLKTAGLVYPCHCNRK
                     DWQAGARRGTDGFVYNGRCRHPGQRPALQGKQPSWRIRVPDRDIGFSDGIVGSYTQNL
                     ARDIGDFVLFRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDSNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMDKVPKHAITAP"
     gene            complement(13532..14548)
                     /gene="dusA"
                     /locus_tag="AABD07_001045"
     CDS             complement(13532..14548)
                     /gene="dusA"
                     /locus_tag="AABD07_001045"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HFB2355595.1"
                     /translation="MINKELIEHKGKRRLCVAPMLDWTDRHYRYLARQITRNAWLYSE
                     MVNAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGC
                     PSPRVQKGAFGACLMNEVGLVADCLNAMHDAVGIPVTVKHRIGVDRQTEYQTVADFVG
                     TLRDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPELEIIINGGIT
                     TNEAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDNRAPIEYADLVQRLYTYSQV
                     QIQAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGGLIFEAWKEVERA
                     NTRE"
     gene            14668..15822
                     /locus_tag="AABD07_001046"
     CDS             14668..15822
                     /locus_tag="AABD07_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFB2355596.1"
                     /translation="MATITKRRNPSGETVYRVQVRVGKKGYPAFNESRTFSKKALAVE
                     WGKKREAEIEAGPELLFKRGKVKMMTLSEAMRKYLNETLGAGRSKKMGLRFLMEFPIG
                     GIGIDKLKRSDFAEHVMQRRRGIPELDIAPIAASTALQELQYIRSVLKHAFYVWGLEI
                     GWQELDFAANGLKRSNMVAKSAIRDRLPTTEELQTLTTYFLRQWQSRKSSIPMHLIMW
                     LAIYTSRRQDEICRLLFDDWHKNDCTRPVRDLKNPNGSTGNNKEFDILPMALPVIDEL
                     PEESVRKRMLANKGIADSLVPCNGKSVSAAWTRACKVLRIKDLRFHDLRHEAATRMAE
                     DGFTIPQMQRVTLHDGWNSLQRYVSVRKRSTRLDFKEAMMQAQSDIKSGK"
     gene            complement(15872..16138)
                     /locus_tag="AABD07_001047"
     CDS             complement(15872..16138)
                     /locus_tag="AABD07_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355597.1"
                     /translation="MNISKEQGLLIAYGGRPYIPPREVHKDFFAHIGFNAFKASGVRC
                     ELPFPIFRLSDSRKSEYFVSVRELAKAIADKEEKAKSEYRKFRS"
     gene            complement(16246..17124)
                     /locus_tag="AABD07_001048"
     CDS             complement(16246..17124)
                     /locus_tag="AABD07_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFB2355598.1"
                     /translation="MRRLVAAKVRRYCGEHPGVFDGAAGSGQLEQYIEPSDFRAVEIQ
                     AEACKALLQNYPAAKVYNTSLFLYTDGEPQDCTVMNPPFSIKLKDLSEDEKSRIAQEY
                     PWKKSGVADEIFVLKGLENARRFGFFILFPGIAYRKSEQRFREIIGNRLAELNRIQNA
                     FEDTPIEVLLLVIDKDKTDGGCIRELYDCKTDTLLAADTWQIEPDLWQTVQEPAPPKE
                     KEDPVLLEHECRDAAAKRIARELRFSKMVNEIEGWPHAEFDGFCDRLCNLIQAEKYGK
                     KHYFPCSLPLFGGAAG"
BASE COUNT         3918 a         4588 c         4626 g         3994 t
ORIGIN      
        1 ttttagcgat tctgtaatag aagttatcag ctcgacagaa cctgtatttt attcaaaata
       61 acaaattatc aaacaaaact ctgattaaaa acccaacaat cagaatgccg tctgaagcgg
      121 tattcggctt tcagacggca ttttctccga ttggcacagg atgcaggggc ttgccggctt
      181 gattttgccg aagttgttgg cacgcaattt ggagggggcg acaacctatg aaaaataaat
      241 cgttaaggat atttttagtt ttacccaatt tgtttccgaa aaagtacggc agcaaccgta
      301 gattagatta aaaatcaaac aatcaaagcc cgcctgatat aatcgatata tcctgttaaa
      361 cgaaaaataa atatgtttaa aaaattcaaa ccggtattgt tgtcattttt tgcacttgta
      421 tttgcctttt ggctgggaac gggcattgcc tatgagatta atccgcgttg gtttttgagc
      481 gatacggcaa ctgaaatacc tgaaaatccg aatacttttg tggcgaaact tgcccgcctg
      541 ttccgaaatg ccgacagggc ggttgtcatc gtgaaggaat cgatgaggac ggaggaaagc
      601 cttgccgaaa ctgtggatga cggtccgttg cagtcggaga aggattatct cgcgctcgct
      661 atccggctca gtcgtttgaa agaaaaggcg caatggtttc acgtaacgga gcaggaacat
      721 ggggaagagg tctggctgga ttactatatc ggcgagggcg gtttggttgc ggtttcgctt
      781 ttgcaacgat cgccggaagc gtttgttaat gccgaatatc tgtatcggaa cgatcgtccg
      841 ttttctgtaa atgtgtacgg cggaacggct cacggggaaa attatgaaac gacaggagaa
      901 tatcgggttg tttggcaacc ggacggttcg gtatttgatg cgtcggggcg cgggaaaatc
      961 ggggaagatg tttatgagca ttgcctcggg tgttatcaga tggcccaggt atatttggcg
     1021 aaataccggg atgtcgcgaa tgacgagcag aaggtttggg acttccgcga agagagcaac
     1081 cggattgcgt cggactcgcg cgattatgtg ttttatcaga atatgcggga attgatgccc
     1141 cgggggatga aggcgaacag tcttgtggtc ggctatgatg cggacggtct gccgcaaaaa
     1201 gtctattgga gtttcgacaa tggaaaaaaa cgccagagtt tcgaatatta tttgaaaaac
     1261 ggaaatcttt ttattgcaca atcttcgacg gtagcattga aagcggatgg cgtaacggcg
     1321 gatatgcaga cctatcatgc gcaacagacg tggtatttgg atggcgggcg gattatccgc
     1381 gaagagaaac agggagacag actgcctgat tttcctttga acttggaaga tttggaaaaa
     1441 gaggtgagcc gttatgcaga ggctgcggcg agacgttcgg gcggcaggcg cgacctttct
     1501 cactgaacgc aaatgccgtc tgaaaccggt tttcagacgg cattggagag tcaaacgctt
     1561 tttgcaatgc cgtatatgcc gaacccggtt cgctacaaat tgaaaaccac aatccaaaaa
     1621 acggaaatac acattatcaa acaaacaaat aagttgacat attgtgcgat attgagggct
     1681 gtaccgtatt ttcccgttct ttatatgagc ggcaggcatc ctcataaaag aagggatacc
     1741 gataaggaaa aatccctcgg tataaaaaat atactgatta atcaatacaa atccaacaaa
     1801 cagttcatca ttttcttttc tgttggcgta taaaaaccgc tcggaaaaaa ataaaatatc
     1861 aaaacggcaa aataaaaata ctgatatatg ccttcacttt catagggcga cgctctatgt
     1921 gccgtcctgt gtgttgaaac gtcggttttc cttaccgcct gccccgcttt tccctgattg
     1981 ctgccaactg ccgtccgaac ctgaaccgtc aggtttcaga cagcattttt tctccctgtt
     2041 cccacaattg ccgtttttgt gcggcggtca gttttttgac ggcgatttcc tgtttgagcg
     2101 cagtgccttt atccatgccg cctgcaacga tacgcatcgc caccggtttg aatacgcggg
     2161 tatatttcgc gccttttccg gctgtgtgga tggcaagccg ctgttgcgga ttcgggctga
     2221 taccgcaata gaacgcgctg ttttcacaca atatcaggta aacgctccag tttgacgcgt
     2281 tcatctgcct gcatcctggg ttttttcccc gttccaaggc gcaactttca gcagcagcag
     2341 catacccggc agggcaagta tgaaacacag ccggaaaaac ggtacataac ccatccattc
     2401 gatcagatag cctgcaaagg aattgatgac cgtgcgcggc acggcggaca ggctggtaaa
     2461 cagcgcaagc tgcgttgccg taaacgcggg attggtctcg cgcgccatat acgatacgaa
     2521 cgccgccgtc cccaacccca cgccgaccgc ttccgcgccg ataactgccg ccagcatcag
     2581 cctctcgcct gtgccgaccg tgtcgaaatg tccgaaccct gccagccata caaaccccaa
     2641 aaccgttatt gcctgcaccg cgccgaatag ccacaaggct ttgtttacgc cgattttcag
     2701 catccacacg ccgcccaaga tacctgccgc cactgccggc cacagtcctg catttttggc
     2761 aatcaaaccg atgtcggtct tgctgaaacc catatccaga taaaacggcg ttgccaacgc
     2821 ggttgccata ctgtcgccga gtttgtaaag gaagataaac agcagcacgc acaccgccga
     2881 agcgatgccc ttgcgcataa aaaattcttt aaacggctct accacggtct gcttcaacgt
     2941 tttaggaacg gaaggcggca acacgggttc gtgcgcgaga aacagcgtca tcagaaggcc
     3001 gggcagcata aataatgaag tgataacaaa tacttctgac cacggcatcc tgtctgccaa
     3061 caccaaactc aatgaaccgg gaatcagggc ggcaacccgg taggcgttca catgaaccga
     3121 gttgcccaaa cccaattctt cgtccgacaa aatctcgcgc ctgaacgcat ccaatacaat
     3181 gtcctgactg gcggaaaaaa aagcgacaag caccgacaag ccggcaatca acggcagatg
     3241 attccggggg tttaaaaagg catatgccgc caaagccgcc agtaaccctg cctgcgtcag
     3301 cagcatccac ccgcgccgcc gtcccaaaac gggcagcctg accgcgtcca tcagcggcga
     3361 ccacaaaaat ttccaagtaa acggcagacc gatcaacgcc atcagcccga tgctcttcaa
     3421 atccacctgc tcgctgcgca accacgccgg aatcaggtta atcagaaagt acagcggcag
     3481 ccccgaggca aaccccgtaa aaatacagac gagcatatta cgggaaaaga tttgcccgat
     3541 aaaacctgat ttcgatgcag tcatcgttcg tacagccaaa aaacaaaagc ctattgtagc
     3601 aaatatcgcc cgcctgctga aaaatgccgc cacgcgccgc cggtttgccg ttccaatgca
     3661 aaatgccgtc tgaaactgtg ttcagacggc attgctactg aaacccgacg gtttacaggc
     3721 tgtaatacat ttcaaattcc agcgggtgcg gcgccatacg gatgcggcgg acatcttcct
     3781 ctttaaaggc gatgtagctg tcgatccagt ctttgctgaa cacgccgccg cgcagcagga
     3841 attcgtggtc ggccttgagg gcggcaagtg cttcttccaa agaagcgcag acggtcggga
     3901 cgagcgcgtc ttcttccggc ggcaggtcgt acaggttttt atcggcaggg tcgcccggat
     3961 ggattttgtt ttgaatgccg tccaaacccg ccatcagcag ggcggcaaat gccaaatacg
     4021 ggttggcggt cgggtcgggg aaacgcgctt cgatgcggcg cgccttgctg ctgttcacag
     4081 acgggatacg gatggaagcg gaacggtttt tggcggaata ggccaatttg gtcggtgctt
     4141 caaagtgcgg cacgaggcgt ttgtaggagt tggtggacgg attggtaatc gcgttcaggg
     4201 ctttggcgtg tttgatgatg ccgccgatgt agtagagcgc ggtatcggac aaaccggcat
     4261 agccgtcgcc tgcgaacagg ttttgaccgt ctttccaaat ggattggtgg acgtgcatac
     4321 cgctgccgtt gtcgcccata atcggtttgg gcataaaggt ggcggttttg ccgaaattgt
     4381 gggcaacgtt ttggatgacg tatttcatat cttgggtttg gtcggcgcgt ttgaccaaag
     4441 tggcgaaacg ggtgccgatt tccatttggc tgccggtacc gacttcgctg tggtggactt
     4501 cgacttcgat gccgagtcct tccaaaatgt tcaccatggc ggagcgcaaa tcttgaccgc
     4561 agtcaatcgg cgcgacgggc gcgtagccgc ctttgacggc ggggcggtgg ccggtgtttt
     4621 gaccgtccat atgcaggccg cttgcccacg cgccgctttc ggacgtgatt tcgtaacggg
     4681 ttttgtgcat gtcggtttca aattctacgc cgtcgaagac gaagaattcg ggttcggggc
     4741 cgaaataggc ggtgtcgccg ataccggaag atttcaaata ggcttcggcg cggcgtgcga
     4801 tggagcgcgg gtcgcggtcg taaccctgac cgtcggcagg gtcgatgacg tcgcaggtaa
     4861 tgacgacggt aacatcatca taaaaaggat cgacgaaggc tgtggacgca tcgggacgca
     4921 gctgcatatc ggaagcctga atgcctttcc agccgccgat ggacgaaccg tcaaacgcct
     4981 gaccgttttc gaaccactct tcggggcctt ccaacacgat gcgcgcaggc acggtaaagt
     5041 ggtgctgctt gcctttggta tcggtgaagc gcaaatcgac aaagcgggct ttgctttttt
     5101 caatcaattt tacggcgttt ttaatggaca tcttcagctc ctgaaaaagg gaaatggcaa
     5161 aatacgcgga acgcggcggc ttgacgcaaa gtcggcacga ttttaccacg ccgatgccgt
     5221 ctgaaaccgg ttttgcgtca aattccaagc cggaaaatat agtttcaaac ggcaagattg
     5281 tcaacaatat gcttcggttt gtctgttcaa aagcggaatg cccgcccttt tgtccgaatg
     5341 ccgacaaaac agatgccgtc tgaaggcggt ttcagacggc atcgttccca tcttcgcgcc
     5401 gccgttataa aatgaccgcc ccgcctttat ggaatatgac tatgcacgcc ctcccccgct
     5461 acgccgtttt cggcaacccc gccgcccaca gcaaatcgcc gcagattcat cagcaatttg
     5521 cccttcagga aggcgttgac atcgaatacg gacgcatttg cgccgacatc ggcggtttcg
     5581 cgcaggcggt ttcgacattt tttgaaacag gcggttgcgg ggcaaacgtt accgtaccgt
     5641 tcaaacagga agcgtttcat ctggcggacg aacattccga ccgcgctttg gctgccggtg
     5701 cggtcaatac gctggtgtgg ttggaagacg gcagaatacg cggcgacaat accgacggta
     5761 tcggtttggc caacgacatc acgcaggtca aaaacattgc catcgagggc aaaaccatct
     5821 tgcttttggg cgcgggcggc gcggtgcgcg gcgtgattcc ggttttgaaa gaacaccgcc
     5881 ctgcccgtat cgtcattgcc aaccgtaccc gcgccaaagc cgaggaattg gcgcggcttt
     5941 tcggcattga agccgtcccg atggcggatg tgaacggcgg tttcgatatc atcatcaacg
     6001 gcacgtccgg cggcttgagc ggtcagcttc ctgccgtcag ccctaaaatt ttccgcgact
     6061 gccgccttgc ctacgatatg gtttacggcg aagcggcaaa accgttttta gattttgcac
     6121 gacaatcggg ggcgaaaaaa actgccgacg gactgggtat gctagtcggt caggcggcgg
     6181 cttcctacgc cctctggcgc ggtttcaaac cggacatccg ccccgtcatc gaacacatga
     6241 aagccctgta accatgttcc gcatcgtcaa atggctgatt gccctgcccg tcggcatctt
     6301 tatcttcttc aatgcctatg tgtacggcaa catcattacc taccgcgccg tcgcgcccca
     6361 tcggactgcc tttatgtcga tgcggatgaa gcagtttgaa caagaaggtc gcgatgtcgc
     6421 actggattac cgctggatgc cctacaaacg catttccacc aacctgaaaa aagccctgat
     6481 tgcttccgaa gatgtccgtt ttgccggaca cggcggcttc gattggggcg gcattcaaaa
     6541 cgccatcagg cgcaaccgga acagcggcga agtgaaggcg ggcggatcga ccatcagcca
     6601 gcagcttgcc aaaaacctct tcctcaacga aagccgcaac tatctgcgca aaggggaaga
     6661 ggcggccatt acggcaatga tggaagctgt taccgacaaa aacaggattt tcgaactgta
     6721 tttaaactca atcgaatggc actacggcgt tttcggcgcg gaagctgcgt cccggtattt
     6781 ttataaaaaa ccggccgcag acctgaccaa acagcaggcg gcgaaactga cggcactcgt
     6841 ccccgccccg ctctactacg ctgaccatcc gaaaagcaaa cggctgcgca acaaaaccaa
     6901 tatcgtgctc agacgcatgg gttcggcaga attacccgaa agcgatacgg actgattgtt
     6961 tcagatatgg aaatgccgtc tgaactgcgg ttcggacggc atatgttttc tggttcttat
     7021 agtggattaa atttaaaccg gtacggcgtt accccgcctt gccgtactat gttgtactgt
     7081 ctgcggcttc gtcgctttgt cctgattttt gttaatccac taacctgccc gacagccgca
     7141 aagaccatgt cgtgcatggc aggtatttgc ggtgcgggac tgctgccgaa aacggcaggc
     7201 aaaaaataac cgcttataag cggttttttg gtggccagag gcggaatcga accgccgaca
     7261 cacggatttt caatccgttg ctctaccaac tgagctatct ggcctgtatc tgtctcgtta
     7321 agaggtgcgt attaaaccaa atttcgggac gacacgcaag cggatttgtc gatatttttt
     7381 acccaaccga ctaagtcgat gttttaagtt taaattaatt tcacagaaaa atagtgcaaa
     7441 tcggtttttt gccgttcgtt cggcgatgtt ctgctttgca gacggcaaaa cgcttcaata
     7501 tttgaagttc tcgcccaaat agacggcgcg cacctgttcg ttgccgacca aatcgtcggg
     7561 cttgccggaa gccagcaccg caccgtctga aatgatgtag gcgcggtcgc agatgctgag
     7621 ggtctcgcgg acgttgtggt cggtaatcaa tacgccgatg ccgcgcgatt tgaggaaacc
     7681 gatgattttc tggatgtcga tgacggcgat gggatcgacg ccggcaaaag gttcgtccaa
     7741 aaggatgaaa cgtggtttca tggcgaggac acgggcgatt tcgacgcgcc gccgttcgcc
     7801 gccggacagc gacggcgcag gattgcggcg caagtgtccg atattgaggt cggcgagcag
     7861 tttttcgatt tctctgtcga tttgattttt atctttggtt ctgatttcca agatggcgcg
     7921 gatgttttgt tcgacggtca ttttgcggaa tatcgaggct tcctgcggca ggtagccgac
     7981 acccaggcgg gcgcgttcgt gtatgggcag gtggcgcaat tcccgcccgt ccagcatcac
     8041 gctgcctgcg tcggcagcga tgagcccgac tatcatgtag aagccggtgg ttttgcctgc
     8101 gccgttgggc ccgagcagtc cgatgacttc gccgctttcg atctcaaggg agaaactttt
     8161 gacgacttgg cgttttttga aacttttctg caggttttgg acgacgaggc ggctgttgtt
     8221 tgcgctcata aatctcttct cggcatttcg gtcggcaaat gccgtctgaa ctgcgtttcc
     8281 gtttcagacg gcatcggggt tattcggttt tttgtgtgct tgaaggctgg atgacgacgc
     8341 tgaccctgcc ggttttggaa gcggatttcg cacccgattt cgtgctgccg ttgatggtat
     8401 agacttcggt tttggtgttg taggtaatga ccgcaccttc ggcaacgtcg ccgccgcgct
     8461 gcactttggc attgccggtc agaacgacgg tgcttcctgc ggaggaatag gtaacgttgt
     8521 ttgcctgacc gcgcaccgtc cctttgcccc cgtccaacgt ttggctgaag cggacgggcg
     8581 aaccttccgc cctcacggat tcgccgcctt tgccgccgcg tgtgacgttg acgcgcgagg
     8641 cggaaatgtt gagcgtaccc tgtctgatga tgacattgcc gctaaatgtg gtactttggt
     8701 tggcttgatc gagcgaacct tggtcggctt cgatttggat gggccgtctg ctgtcgcttt
     8761 gaagggcaaa agcgggagaa gttgcaaaaa ttacaattaa aacaaatagc ttacatatct
     8821 tttgtatcat aaatcgcggc tttcacttta gatgagaagt tcaacatgcc tgttttgtgg
     8881 ttgtaggtca taccgcccgc ctgaccgtgc gacgcgccat attggaaact gacaggcgta
     8941 tcggtttggg catattgaga ttcggtatcg acgtgcagtt tttcggtttc gactttaccc
     9001 gcctgccgcc tgccgtcggc ggttttggtc agcacaacgt tgtttttaaa aagaacctgt
     9061 ttgttttcgg tatggtaaac ggcttcatcg ctgccgactt cgtacaacag cctgccttct
     9121 tggaagaaca cgagatgcgg cgaatcaaaa tggatgtcgc tgttttcggg aaactgtttc
     9181 gcacctttcg cgctcaaatg ttctttcaag tatccctgtt cgtcaaaccg ccttccgtcc
     9241 aagccgtcca ttgtgtattg aggttcgtcg ggattgagcc tgacttcctc gatttcgact
     9301 tcgctgatac ggcccaacca tgccgacagg ctgcccaagg caaccgccaa tatcaatggg
     9361 aacgcaattc cgtaccgcca tcttactttc atttgatgta cccgttcaaa gccgcgccca
     9421 acgtaccttt cgcgcggata atcaggtcac acacttcgcg caccgcgccc gcaccgccgg
     9481 ggcgtttggc aatataggcg gcgtgttgca gcgtaaacca atgcgcgtcg gggacggcaa
     9541 ccggcaatcc gcagcgcacc atcaccggca aatcgaccac gtcgtcgccg acaaaggcgc
     9601 actcggcttc ttccaagcct gcctgcgcgc gcagctcttc atacgcggcg cgtttgtccg
     9661 aaatgccttt gaagtagtaa tttatgccca actgtttgac gcggatgccg acggagggcg
     9721 cgtcccgacc tgtgataatc gcagtctgca cgccgcttgc ctgaagcatt ttcaggccgt
     9781 gtccgtccag tgtgtgaaac gatttgattt cttcgccgtc gtcgcggata aagatgcgcc
     9841 cgtcggtcaa aacgccgtcc acatccaata tcagcagttt gattttggcg gcgcgtgcct
     9901 gtaattcggg agaaattgcc tgcattggga tttccttgtt ttcagacggc atatcttacc
     9961 acaaatgccg tctgaaacgg ctgcaacgcc ttatacaatc cgcgccgcca aaaggtcgtg
    10021 catattcagc gcacctgtca gcacgccgtc tgcatcggta accagaagcc cgttcacatg
    10081 gtttgcctgc atgactttca gggcttcggt ggcgaggcgt tcggcggaga tggttttagg
    10141 gtgtgtatgc atgacttcgt ctatcgaaag accggtaaaa ttgtcgcatt cttgaaacag
    10201 gcggcgcaaa tcgccgtcag taaacacgcc tttcagacag ccttgcccgt ccgttaccgc
    10261 caacatgccc aaacctttct cgctcatgct gacgatggct cctttcaagg gcgtgccgag
    10321 tcggacggcg ggcaggccgc cgcctttgtg cataatgtcg gcaacgcgca aaagcaggcg
    10381 tttgccgagg ctgccggcag ggtggatcaa ggcgaagtcg tcgggcgtga acgcgcgggc
    10441 gcgcagcagg acgaccgcca acgcgtcgcc caaagccata acggcggtgg tgctggtggt
    10501 cggggcaagc cccaacgggc aggcttcttg cgaaaccgat gcggtgatgt ggatatcggc
    10561 atggcgcgcc atggttgaat cggggcgggc ggtgatgcag acgagggtaa tgtctttgcg
    10621 tttgagcgcg gggatgatgg cggtgatttc gtcgctttcg ccggaattgg aaatggcggc
    10681 gacgacgtcg ttgtccacaa tcatgcccaa atcgccgtgt gccgcttccg cagggtggac
    10741 gaaaaacgcg ggcgtgccgg tcgaggccat ggttgccgcc attttgcgcc cgatatgtcc
    10801 ggacttgccc atacccgtga tgacgaccct gcccttgcag tgcaacaacg cgtctgccgc
    10861 aaggacgaag ttttcgtcca attccgccgc aatttcgcgc aagccttccg cttcggtgtg
    10921 caacacttcg cgcgcccagt cgagatattt ttcgttttct gccattgcca tccgcctttg
    10981 ctgtaacaaa actacccaaa atttccgaat cggggtagca taagccttca aaccccgccc
    11041 atccatccaa aggaatcaaa aatgactatt ttatcggacg ttaaagcatt aggacaacaa
    11101 atctggctgg acaacctttc ccgctcgctc gtgcaaagcg gcgaattggc gcaaatgctc
    11161 aaacaaggcg tgtgcggcgt aacttccaat cccgccattt tccaaaaagc cttcgccggc
    11221 gacgcgcttt atgccgacga ggtcgccgcc ctcaagcggc aaaacctcag ccccaaacaa
    11281 cgctacgaaa ccatggcggt tgccgacgta cgggcagcct gcgacgtttg ccttgccgaa
    11341 cacgaatcca ccggcggcaa aaccggtttc gtcagtctcg aagtttctcc cgaacttgcc
    11401 aaagacgctc aaggcacggt agaagaagcc cgccgcctcc atgccgccat cgcgcgtaaa
    11461 aacgccatga ttaaagtgcc tgccaccgac gcaggcatcg atgcgctcga aaccctcgtt
    11521 tcagacggca tcagcgtgaa cctgaccctg ctgttctcac gcgcccaaac cctcaaagcc
    11581 tacgccgcct acgcgcgcgg cattgccaaa cgcttggcag ccggacaaag cgttgcccat
    11641 atccaagttg tcgccagctt cttcatctcg cgcgtggaca gtgcgctgga tgcaacgctg
    11701 cccgaccggc tcaaaggcaa aaccgccatc gcccttgcca aagccgccta tcaagattgg
    11761 gaacaatatt tcaccgcccc cgaatttgcc gcactggaag cccaaggcgc aaaccgcgtg
    11821 cagcttttat gggcatctac cggcgtgaaa aacccagcct atcccgacac gctctacgtt
    11881 gacagcctga tcggcgtgca caccgtcaac accgtccccg atgccacgct caaagccttt
    11941 atcgaccacg gcacggcgaa agcgacgctg accgaaagcg cggacgaagc acgggcgcgg
    12001 ctcgccgaaa ttgccgcgct cggcatcgat gtcgaaacct tggcggcgcg tttgcaggaa
    12061 gacggtttga aacagtttga agaagccttt gaaaaactgc tcgcgccttt ggtttaggca
    12121 tttccccgat gccgtctgaa aggctttcag acggcatcgc ccgtttgacc ggacacagtg
    12181 cggcatatca aggatccgcc ctaaaaatat taatgggcaa gaagttaatg cacgacatta
    12241 cccgccaaca caaaaggaaa tagaatcatg gcaaaagcac tcgaaatcat ttcacccgat
    12301 gaaatttatt cagatctgat ttttaaggat ccggtacctc cccatactat atatacagaa
    12361 ttgatgaaac tggttggtag aaatgcaggc aatgagagaa ttgcagatag agccttcgat
    12421 tttttctcgc ctgctcttat ggatgattca gctaccgaag agcaatataa tgccctatat
    12481 gatttaacct tgcttgaaga gcccgggatg gaactggata aagatgagat aacggctttg
    12541 attaatagtc ttaaataaag gggctgtacc ggatatgtac acaggacgct tcgcccccag
    12601 cccgaccggg ttgctccaca tcggctctct gctgaccgcc gtcgcttcct atgccgatgc
    12661 acgttcaaac ggcggcaaat ggctggtccg tatggaagac ctcgatccgc cgcgcgaaat
    12721 gccgggggcg gcaagccata tcctgcacac gctcgaggca ttcggattcg agtgggacgg
    12781 cgaagtcacc tatcagagcc gccgttacgc cctgtatgaa gaaaccctat accgtctgaa
    12841 aaccgccgga ctggtctatc cctgccattg caaccgcaaa gactggcagg ccggggcaag
    12901 gcggggcaca gacgggttcg tctataacgg acgctgccgc caccccggcc aacgccctgc
    12961 actgcaaggc aaacagccgt cgtggcgcat ccgcgtcccc gaccgcgaca tcggcttttc
    13021 agacggcatc gtcggcagtt acacccaaaa cctcgcccgc gacatcggcg atttcgtcct
    13081 gttccgtgca gacggttact gggcatacca gctcgccgtc gttgccgacg atgccgaaca
    13141 gggcgttacc cacatcgtgc gcggacaaga cctgctcgtt tccacaccgc gccaaatcta
    13201 tttgcagcag tgtttgggcg ttccgacacc gcaatatgcc cacctgccgc tgctgaccaa
    13261 cgcgcaaggg cagaaatggt cgaagcagac gctcgccccc gcattggatt caaaccgccg
    13321 cgaacaactt ctccgccaag tgttccgcta cctcaagctg cccgaagcac cggaaaccga
    13381 ccgccctgcc gaattgctcg actgggcggt ggcacactgg gatatggaca aagtgccgaa
    13441 acacgccatt accgccccct aaacaccacc cgacaaacgc acaaatgccg tctgaaacct
    13501 tcagacggca tttcacacat acagccccgc cctattcgcg cgtatttgcc cgttcgactt
    13561 ctttccacgc ttcgaaaatc aggccgccgt cgttgtcttt caagagcgtt gcatcggaaa
    13621 gcatacgccg ccaagtccgc gcgcctttca aaccgtgcat cagcccgagg ctgtggcgga
    13681 cgatgtggcg caggattgtg ccgcgtccgg cttggatttg gacttggctg tatgtgtaga
    13741 ggcgctgcac caaatcggcg tattcgatcg gggcgcggtt gtcaccgtaa aacagcctgt
    13801 cccattcgcg catcaccatc gggttgtggt atgcctcgcg cccgaccatc acgccgtcaa
    13861 cgtgttgcaa gtgtccggcg attgcttcgt tggtggtgat gccgccgttg atgatgattt
    13921 ccagctcggg aaactcctgc ttgaggcggt aaacgtaatc gtatttcaag ggcggaacat
    13981 cgcggttttc tttgggcgaa agaccgtcca gccaagcgtt gcgggcgtgg acgatgaagg
    14041 ttttgcaggc ggttttgtcg cgcagcgtgc cgacgaaatc ggcaacggtt tggtattcgg
    14101 tctgcctgtc cacaccgatg cggtgtttga cggtaacggg gatgccgacc gcgtcgtgca
    14161 tggcgttgag gcagtcggca accagcccga cttcgttcat cagacacgcg ccgaacgcgc
    14221 ctttctgcac gcgcggactg ggacagccgc agttgaggtt gacctcgttg tagccgtatt
    14281 cttcggcggc tttggcggct ttcgccaaat cggacggatc gctgccgccc agttgcaggg
    14341 cgacgggctg ctcgccttca ttgaacatca aaaagcggtc tttgtcgccg taaacaatcg
    14401 cgccggcgtt gaccatttcg ctgtacagcc aagcatttcg ggtaatctgg cgggcaaggt
    14461 aacggtagtg cctgtccgtc cagtcgagca tcggggcgac gcataaacgc cttttccctt
    14521 tatgttcaat aagttccttg tttatcataa ggttttcaca ttcttttaac tcaaacattc
    14581 tttattattt gcttggattt ttgcccattt cactatattt gacgtaccat acttgcacca
    14641 taatttttaa ttcttggaat ggtgcaaatg gcaacaataa ccaagcggcg caatccttcc
    14701 ggcgaaacag tatatcgggt tcaggtacgg gtcggcaaga aaggctatcc tgctttcaat
    14761 gagagcagga cgttcagtaa aaaggctttg gcggtcgaat gggggaagaa acgggaggcg
    14821 gaaatcgaag ccggcccaga actgcttttc aagcgcggca aggtcaagat gatgacgctg
    14881 tccgaagcta tgcggaagta tcttaacgaa acgcttggag cgggtcggtc aaagaaaatg
    14941 ggcttgcgtt ttctgatgga gttcccgatt ggcggcatcg gcatcgataa gctgaaacgg
    15001 tctgatttcg cggaacacgt tatgcagagg cggcgcggaa tccccgaact ggacattgcg
    15061 ccaatcgcgg cttctacggc attgcaggag ctgcaatata tccgttccgt gctaaaacac
    15121 gccttttatg tgtgggggct tgaaataggc tggcaggaat tggatttcgc ggcaaacggg
    15181 ctgaaacgct cgaatatggt tgcgaaatct gcaatcaggg acagattgcc gaccacggaa
    15241 gaactgcaaa ccctgacaac ttatttcctg cggcaatggc aaagcaggaa atcttccata
    15301 ccgatgcacc tgattatgtg gctggcgatt tatacgtcaa ggcggcagga tgagatttgc
    15361 cgcctgctgt ttgacgactg gcacaaaaat gattgtaccc ggccggttcg tgatttaaaa
    15421 aatccgaacg gcagcacagg gaataataag gagtttgata ttctgcctat ggctttgccg
    15481 gtcattgacg agctgccgga ggaatcggtc aggaagcgta tgcttgccaa caaaggcatc
    15541 gccgacagcc ttgtaccgtg caacggaaaa tcggtttccg ccgcttggac gagggcgtgc
    15601 aaggttctta gaattaaaga cttgcgcttc cacgatttac ggcacgaggc tgctacccgt
    15661 atggctgaag acggcttcac gattccgcaa atgcaacggg taacgctgca tgacggttgg
    15721 aacagcctgc agaggtatgt gagcgtacgc aaacgctcga cgcggctgga ttttaaagag
    15781 gcaatgatgc aggcgcaaag cgatataaaa tccgggaagt gatgttaaat taaaggggat
    15841 gtgccgcatc ccctgattcc tccgtcttgc atcaagaccg gaatttccga tattccgatt
    15901 ttgccttttc ttccttgtct gcgattgcct ttgcaagctc tcggacgctg acgaaatatt
    15961 ccgattttcg gctgtcggac aatcggaaaa tcggaaacgg aagctcgcac cgtacccccg
    16021 atgctttaaa cgcgttaaag ccgatatggg caaaaaagtc tttgtgtact tccctcggcg
    16081 ggatatacgg gcggccgccg tatgcgatta aaagcccttg ttctttactg atgttcatat
    16141 atacctcttt ctgttaattc tgctttgtcc gggtttccgc ttttttacgg cttggcggat
    16201 gttcagcctg cgtcggtgca taagtcctcc tgttcgggcg gttgttcagc cggccgcccc
    16261 tccgaaaagt ggcaggctgc acgggaagta gtgttttttt ccgtatttct ctgcctgtat
    16321 caggttgcac aggcggtcgc aaaagccgtc aaattcggca tgcggccagc cttctatctc
    16381 gttgaccatt ttgctgaacc tcaattcccg ggcaatccgc tttgccgctg cgtcacggca
    16441 ttcgtgttcc aagaggacgg ggtcttcctt ttccttcggc ggtgcaggtt cttgcacggt
    16501 ttgccacaag tccggttcga tttgccaagt gtcggcggca agcagggtgt ctgttttgca
    16561 gtcgtacagt tcgcggatgc agccgccgtc ggttttgtct ttgtcgataa ccagtaaaag
    16621 cacttcgatc ggcgtgtctt caaacgcgtt ttgtatgcgg ttgagttctg ccagccggtt
    16681 gccgatgatt tcgcggaatc gctgctcgct tttgcggtag gcgatgccgg ggaacaggat
    16741 gaagaatccg aagcggcggg cgttttccaa tccttttaaa acgaagattt catcggctac
    16801 gcccgatttc ttccacgggt attcctgtgc gatacggctt ttttcgtctt cgctcaaatc
    16861 ctttagcttg atggaaaacg gcggattcat gacggtgcag tcttgcggtt cgccgtcggt
    16921 ataaaggaaa aggcttgtgt tgtatacttt ggcggcaggg tagttttgca acaaggcttt
    16981 acacgcttcc gcctgtatct ctacggcgcg gaaatcggac ggttcgatgt actgctccag
    17041 ctgcccgctt cctgccgcgc cgtcaaatac gcccgggtgt tcgccgcagt atcggcggac
    17101 tttggcggca accagccgcc tcaagc
//
LOCUS       DAWXHA010000043        17077 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.043, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000043 DAWXHA010000000
VERSION     DAWXHA010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17077
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.043"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            79..816
                     /locus_tag="AABD07_001049"
     CDS             79..816
                     /locus_tag="AABD07_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HFB2355599.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAICCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKVKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            1065..2468
                     /locus_tag="AABD07_001050"
     CDS             1065..2468
                     /locus_tag="AABD07_001050"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFB2355600.1"
                     /translation="MKKIQADIVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMRRVKSERDRFVGFVV
                     TDVEEWPADKRIMGSAKFIDEHTVQIDDHIQIAAKSFVIATGSRPVILPQWQSLGDRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIDKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGSGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            2755..3132
                     /gene="sdhC"
                     /locus_tag="AABD07_001051"
     CDS             2755..3132
                     /gene="sdhC"
                     /locus_tag="AABD07_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HFB2355601.1"
                     /translation="MSVKLRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGILWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            3126..3467
                     /gene="sdhD"
                     /locus_tag="AABD07_001052"
     CDS             3126..3467
                     /gene="sdhD"
                     /locus_tag="AABD07_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HFB2355602.1"
                     /translation="MVERKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFALPKEY
                     PAWQAFFSQAWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSVKVIWG"
     gene            3470..5233
                     /gene="sdhA"
                     /locus_tag="AABD07_001053"
     CDS             3470..5233
                     /gene="sdhA"
                     /locus_tag="AABD07_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009118267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HFB2355603.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDSQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVQEIMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            5353..6060
                     /locus_tag="AABD07_001054"
     CDS             5353..6060
                     /locus_tag="AABD07_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HFB2355604.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRVV"
     gene            6064..6312
                     /locus_tag="AABD07_001055"
     CDS             6064..6312
                     /locus_tag="AABD07_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HFB2355605.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALIHGHSETDKGHLIPMLEKIRRA"
     gene            6424..7707
                     /gene="gltA"
                     /locus_tag="AABD07_001056"
     CDS             6424..7707
                     /gene="gltA"
                     /locus_tag="AABD07_001056"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009116987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HFB2355606.1"
                     /translation="MSKSIKLNVPGRAGLELPVLEASIGHDVVDIRGLTKNTGLFAFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDITNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPAGER"
     gene            7912..10740
                     /locus_tag="AABD07_001057"
     CDS             7912..10740
                     /locus_tag="AABD07_001057"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HFB2355607.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALRFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQVEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREKIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLLTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRNMGEGLGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYVGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            10840..12021
                     /gene="odhB"
                     /locus_tag="AABD07_001058"
     CDS             10840..12021
                     /gene="odhB"
                     /locus_tag="AABD07_001058"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HFB2355608.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATVAAEAPAAAPAEAAPAAVPAA
                     AQNNAAMPAAAKLAAETGVDVNVLQGSGRDGRVLKEDVQNAAAKPAAAVAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPVRLLLD
                     L"
     gene            12282..13715
                     /gene="lpdA"
                     /locus_tag="AABD07_001059"
     CDS             12282..13715
                     /gene="lpdA"
                     /locus_tag="AABD07_001059"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFB2355609.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHDFAEHGITVGDVKFDVAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            13835..14122
                     /locus_tag="AABD07_001060"
     CDS             13835..14122
                     /locus_tag="AABD07_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355610.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAVMYLLARMWLPFSK"
     gene            14194..15360
                     /gene="sucC"
                     /locus_tag="AABD07_001061"
     CDS             14194..15360
                     /gene="sucC"
                     /locus_tag="AABD07_001061"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HFB2355611.1"
                     /translation="MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVNVPVVVRLEGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            15371..16261
                     /gene="sucD"
                     /locus_tag="AABD07_001062"
     CDS             15371..16261
                     /gene="sucD"
                     /locus_tag="AABD07_001062"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HFB2355612.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLDLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(16644..17077)
                     /locus_tag="AABD07_001063"
                     /pseudo
     CDS             complement(16644..17077)
                     /locus_tag="AABD07_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT         4352 a         4196 c         4374 g         4155 t
ORIGIN      
        1 atacaaatca ttttgcatgg ggtagaatgc gcggcgattc acaattattt ctcaaaccaa
       61 tctattaagg agctcaaaat ggctttgcaa gatcgtaccg gtcaaaaagt accttccgta
      121 gtattccgca cccgcgtcgg cgacacttgg aaagatgtgt ctaccgatga tttgttcaaa
      181 ggcaaaaaag tagtcgtatt ctccctgccc ggtgcattta ccccgacttg ttcttcttca
      241 cacctgccgc gttacaacga attattcggc gcgttcaaag aaaacggcgt tgacgcaatc
      301 tgctgcgtat ctgtaaacga tactttcgta atgaacgctt gggctgccga agaagaatca
      361 gacaacatct acatgattcc tgacggcaac ggcgaattta ccgaaggtat gggtatgctg
      421 gtcggtaaag aagacttggg cttcggcaaa cgctcttggc gttactccat gctggttaac
      481 gacggcgtgg ttgaaaaaat gttcatcgaa cctgaagaac cgggcgatcc tttcaaagta
      541 tccgatgcag atactatgct gaaattcgtt gctcccgatt ggaaggctca agagtctgtg
      601 gcaattttca ctaaaccagg ttgccaattc tgtgccaaag tcaaacaagc tttgcaagac
      661 aaaggtttgt cttacgaaga aatcgtattg ggcaaagatg caaccgttac ttccgttcgc
      721 gctattaccg gcaagatgac tgcccctcaa gtcttcatcg gcggcaaata catcggcggc
      781 agcgaagatt tggaagctta cttggctaaa aactgatagc tgtttgctta aggcagtttg
      841 attaaactgt ctgatatacc ggatagagtt attcgggcgg ttctatactg ccgctccgaa
      901 taactctata tttacaagaa gatttggata ttgtcgcact caatcgaaat tttgttttta
      961 tttatctgaa taatgttttt gattgggaag atatttaaat gctgtctgaa accgatatgt
     1021 tctgtgtcgg caatgtttca gacgaaaacg gaaggacaaa gattatgaaa aaaattcaag
     1081 cggatatcgt cgtaatcggc ggcggtactg ccggtatggg tgcgtttcgc aatgcccgtt
     1141 tacattcgga taatgtttac ctgattgaaa acaatgtgtt cggcacaacc tgcgcgcgcg
     1201 tgggctgtat gccttccaaa ctcttgattg ccgccgcaga agcgcgtcac cacgcattgc
     1261 ataccgaccc cttcggcgtg catttggaca aagacagcat cgtcgtcaac ggagaagagg
     1321 ttatgcggcg cgtcaaatcc gagcgcgacc gttttgtcgg ctttgtcgtt accgatgtgg
     1381 aagaatggcc tgccgacaag cgcatcatgg gctcggctaa attcatcgac gagcataccg
     1441 tccaaatcga cgaccatatc caaattgcgg caaaaagttt cgtgattgct accggttcgc
     1501 gtcccgtcat cctgccgcag tggcagtctt tgggcgaccg tttgattatc aacgacgacg
     1561 ttttctcgtg ggatacgctg cctaagcgcg ttgccgtgtt cgggccgggc gttatcggtt
     1621 tggaactggg tcaggcattg caccgtttgg gtgtgaaagt tgaaattttc ggtttgggcg
     1681 gaatcatcgg cggcatttcc gaccccgttg tttcagacga ggcgaaagcc gtgttcggag
     1741 aagaattgaa actgcatctg gatgctaaaa ccgaggtcaa actcgacgca gacggcaatg
     1801 tagaagtcca ttgggagcag gatggcgaaa aaggcgtatt tgttgccgaa tatatgttgg
     1861 cagccgtagg tcgccgtccg aacgttgaca atatcggttt ggaaaacatc aatatcgaca
     1921 aagacgcgcg cggcgtaccc gttgccgatc cgctgaccat gcagaccagc attccgcata
     1981 tctttattgc gggcgacgcg tccaaccaac tgcccctgct gcatgaagcc gccgaccaag
     2041 gtaagattgc cggcgataac gcgggccgct acccgaatat cggcagcggt ttgcgccgca
     2101 gcaccattgg cgtggtgttt accagtccgc aaatcggctt tgtcggtttg aaatacgcgc
     2161 aggttgccgc gcaataccaa gccgacgaat ttgtcatcgg cgaagtatcg ttcaaaaatc
     2221 aaggtcgcag ccgcgtgatg ctggtaaaca aaggccatat gcgcctgtat gccgaaaaag
     2281 ccaccggccg ctttatcggc gcggaaatcg taggccctgc cgccgaacat ttggctcact
     2341 tgttggcatg ggcgcatcaa atgaagatga ccgttccgca aatgctggat atgccgttct
     2401 accatcctgt tatcgaggaa ggtctgcgta ccgcgttgcg cgatgccgat gcgaaattga
     2461 aagcctgacc gatatggcaa aacaatgccg cctgaaattt ttttcagacg gcattttatt
     2521 tttggggatg gggttggggg tcggatgctg ataccgtgtc gggaagggag cggcaaaact
     2581 aaaaatcttt cttttaatct gctgtttcca cgcgtgtttg tcaaaatcta tcagtttgtt
     2641 tttaaaatac actgttcaaa atgggataaa acaggtaaat taacgttgat gtaacccagt
     2701 gtagcaatgg gtttacggtt tttgagtcga tatataacta cagaggaatt gactatgtct
     2761 gtcaaactgc gtcctgttta tctggatttg ccgaacatcc gtctgccgat acccgggata
     2821 gtttccatcc ttcaccgcat tagcggggtc gggctgttta ttatgctgcc tttcctgctg
     2881 tattttctgt ccggtaccct gagtcaagag tctgcatttg aaacttaccg tgccattgtt
     2941 tcccatcctt tggtcaagct ggttttaatc ggtatattgt gggcttatct gcaccattct
     3001 ctcgccggta tccgcttttt atttttggat gcgcacaaag gccttgagct gaatactgcg
     3061 cgcaataccg ctaaagccgt atttgcttcc gcattggttt tgactgtcgt tttgggagcg
     3121 ttgttatggt agaacgtaaa ttgaccggtg cccattacgg tttgcgcgat tgggtaatgc
     3181 agcgtgcgac tgcggttatt atgttgattt ataccgttgc acttttagtg gttctatttg
     3241 ccctgcctaa agaatatccg gcatggcagg cattttttag tcaagcttgg gtaaaagtat
     3301 ttacccaagt gagctttatc gccgtattct tgcacgcttg ggtgggtatc cgcgatttgt
     3361 ggatggacta tatcaaaccc ttcggcgtgc gtttgttttt gcaggttgcc accattgtct
     3421 ggctggtcgg ctgcctcgtg tattcagtta aagtgatttg ggggtaagta tgggttttcc
     3481 tgttcgcaag tttgatgccg tgattgtcgg cggtggcggt gcaggtttac gtgcagccct
     3541 ccaattatcc aaatccggtt tgaattgtgc cgttttgtct aaagtgttcc cgacccgctc
     3601 gcataccgta gcggcgcagg gcggtatttc cgcctctctg ggtaatgtgc aggaggaccg
     3661 ttgggactgg cacatgtacg ataccgtgaa aggttccgac tggctgggcg accaagatgc
     3721 gattgagttt atgtgtcgcg ctgcgcctga agcggtgatt gagttggaac acatgggtat
     3781 gccttttgac cgcgttgaaa gcggcaaaat ttatcagcgt cctttcggcg gacatactgc
     3841 cgaacatggt aaacgtgcgg tagaacgtgc atgtgcggtt gccgaccgta ccggtcatgc
     3901 gatgttgcat actttgtacc aacaaaacgt ccgtgccaat acacaattct ttgtggaatg
     3961 gacggcgcaa gatttgattc gtgatgaaaa cggcgatgtc gtcggcgtaa ccgccatgga
     4021 aatggaaacg ggcgaagttt atattttcca cgccaaggcc gtgatgtttg ctaccggtgg
     4081 cggcggtcgt atttatgctt cttctaccaa tgcttatatg aataccggtg acggtttggg
     4141 catttgcgcc cgtgcgggca ttccgttgga agatatggaa ttctggcaat tccacccgac
     4201 cggcgtggcg ggtgcgggcg tgttgattac cgaaggcgta cgcggcgagg gcggtattct
     4261 gttgaacgcc gacggcgaac gctttatgga acgctatgcg ccgaccgtaa aagacttggc
     4321 ttctcgcgac gtggtttcac gcgcgatggc gatggaaatc tatgaaggtc gcggctgtgg
     4381 taaaaacaaa gaccacgtct tactgaaaat cgaccatatc ggtgcagaaa aaattatgga
     4441 aaaactgccg ggcatccgcg agatttccat tcagtttgcc ggtatcgatc cgattaaaga
     4501 cccgattccg gttgtgccga ctacccacta tatgatgggc ggcattccga ccaattatca
     4561 cggtgaagtt gttgttccgc aaggcgacga gtacgaagta cctgtaaaag gcctgtatgc
     4621 cgcaggtgag tgcgcctgtg cttccgtaca cggtgcgaac cgtttgggta cgaactccct
     4681 gctggacttg gtggtgttcg gcaaagctgc cggtgacagc atgattaaat tcatcaaaga
     4741 gcaaagcgat tggaaacctc tgcctgctaa tgccggtgag ttgacccgcc aacgtatcga
     4801 gcgtttggac agtcaaaccg atggtgaaaa cgttgatgca ttgcgtcgcg aactgcaacg
     4861 ctccgtacaa ctgcacgccg gcgtgttccg taccgatgag attctgagca aaggcgttca
     4921 agaaatcatg gcgattgccg agcgtgtgaa acgtaccgaa atcaaagaca agagcaaagt
     4981 gtggaatacc gcgcgtatcg aagctttgga attggataac ctgattgaag tggcgaaagc
     5041 gactttggtg tctgccgaag cacgtaaaga atcacgcggt gcgcacgctt cagacgacca
     5101 tcctgagcgc gatgacgaaa attggatgaa acacaccctg tatcattcgg acaccaatac
     5161 cttgtcttac aaaccggtac acaccaagcc tttgagcgtg gaatacatca aaccggccaa
     5221 acgcgtttat tgatgcgttt tcagacggtc ttcgcctcaa aggtcgtctg aaacctaacc
     5281 atacccacat tgaactgctt gaatttataa tacaaaatca ttgggcagtt gatgagaaaa
     5341 ggaacacttc tcatggaaaa aatgagtttt gaaatttacc gttacaaccc ggacgttgat
     5401 gccaagcctt atatgcagcg ttacgagttg gaattggaac cgaccgacgt gaaacttttg
     5461 gacgctttgg tacgcctgaa agcacaagac gataccttgt ctttccgccg ctcctgccgc
     5521 gaagggattt gcggatcgga cggtatgaac atcaacggca aaaacggctt ggcgtgtctg
     5581 accgatttac gcagcttgaa acagcctgtc aaaatccgcc cgctgcccgg tctgcccgtc
     5641 atccgcgacc tgattgtgga tatgacccag ttcttcaaac aataccattc cgtcaaacct
     5701 tatgttgtta acgacaatcc gattgatgcg gacaaagagc gtctgcaaac tcaggaagag
     5761 cgcaaagagt tggatggttt gtacgaatgt attttgtgcg cctgctgttc gaccgcctgt
     5821 ccgtcattct ggtggaatcc cgacaaattc gtcggtccgt ccggcttgct gaacgcctac
     5881 cgcttcattg cggacagccg agataccatc actaatgagc gtttggataa tttgaacgat
     5941 ccgtaccgtt tgttccgctg ccacaccatt atgaactgcg tggacgtatg tcctaaacac
     6001 ttgaatccga cccgggccat cggtaagatt aaagagatta tgttgaaacg ggttgtttaa
     6061 gaaatgatgg tttttgacga cattgccaaa cggaaaatcc gttttcaaac ccgccgggga
     6121 ttgttggaac tagatttaat cttcggcagg tttatggaaa aagaattcga gcatttgagc
     6181 gataaagagc tgtccgagtt ttccgaaatc cttgaatttc aagatcaaga attgcttgcc
     6241 ttgattcacg ggcattcgga aacggacaaa gggcacctta tcccgatgct tgaaaaaatc
     6301 agacgggcat gaggcatctg aaatttgtct gagggcagat ttcaaaatgc aaaggccgtc
     6361 tgaaagcaaa gaacgtgctg cggatgcagt aacgtgggtt ataacttgca aaggagcgat
     6421 aatatgtcca aatcaatcaa actcaacgta ccgggtcggg caggtttgga gctgccggta
     6481 ttggaagcca gcatcgggca tgatgtggtt gacattcggg ggctgacaaa aaatacaggt
     6541 ttgtttgcct tcgaccccgg atttgtttca accgcaagct gtgagtctaa aattacttac
     6601 atcgacggcg atcaaggctt gctttattat cgcggatacc ccatcgagca gctggccgaa
     6661 aagtccgatt atttggaagt ctgctacctg ttgatttacg gcgaactgcc gactcccgag
     6721 caaaaggcag aatttgacaa tacagtccgc cgccacacga tggtgcatga acagctgact
     6781 tggttcttcc ggggtttccg ccgcgacgcg catccgatgg cgatgatggt cggcgtggtc
     6841 ggcgcgctgt ctgcgttcta ccaagacagc ttggacatta ctaatcccga acaccgcaaa
     6901 atcgcgattt accgccttat ttccaaaatc ccgaccattg cggcaatgtg ttaccgctat
     6961 tcaaacggtc tgccgttcaa ttatccgaag aataatcttt cttattcaga aaacttcctt
     7021 catatgatgt ttgccacacc gtgtgaagac tacaaaccta atcccgtttt ggcacgcgcg
     7081 ctcgaccgca tctttatttt gcatgccgac cacgagcaaa acgcctcaac ttcaaccgtc
     7141 cgtctggcag gctcttcggg tgcgaacccg tttgcctgta ttgctgccgg tatcgcctgc
     7201 ctgtggggtg cttcgcacgg cggtgcgaac gaagccgtgt tgaaaatgct ggatgaaatc
     7261 ggcgatgtgt ccaatgttgc cgcatacatg gaaggcgtga aacagcgcaa ataccgcctg
     7321 atgggcttcg gacaccgggt ataccgcaat atggatccgc gtgccagcat tatgcgcgaa
     7381 acctgctatg aagttttgaa ggaattgggc ttggaagaca gtccgaaatt caaactggcg
     7441 atggaattgg aacagattgc gctgaaagac ccgttcttta tcgaacgcaa actgtatccc
     7501 aatgtcgatt tctattccgg catcgtcctg tccgcgctgg gcatcccgac cgaaatgttt
     7561 accgtcatct tcgccctgtc gcgcagcgtg ggctggattt cgcactggca cgagatgatt
     7621 agcgatcctt cgctgaaaat cggccgcccg cgccagcttt ataccggttc ggaacgccgc
     7681 gattatgtgc cggcaggcga gaggtaacat acattaatat attgtcaaac aggcaatatc
     7741 agagaaccgg attgtttcct gaatccgtct gattgtagtc ggatgaaatc aagacaagca
     7801 atccggttta aaatagggta gaataaaatg tcttttcaga cggcatcagt tcagccgtca
     7861 ggacgcggac ttctaccctt tgtttatatt ttaaagaaaa gagcgcacgc catgatggac
     7921 gaaaaactca atttctctta tctgttcggt tcgaacgcac cctacattga ggaattgtac
     7981 gaggcttttt tggaaaaccc cgatgcggtt gatgaaaaat ggaagcagta tttcaccgat
     8041 ttgagcaaac agccggggac ggttgctgtc gatgtcgcac acacaccgat tcgcgaatca
     8101 tttgttactt tggcgaaaaa gaaaattgca tctgccgttg cgggcggtgc ggatgaggca
     8161 atgctgaaaa agcaagtcag cgttttacgg ctgatttctg cctatcgtat ccaaggcgtg
     8221 ggtgcggccc aacttgatcc gctcaaacgt atccctccgc gcgatattga agccctcgat
     8281 ccgaaattcc acggtctgtc agatgccgat atggcgcttc gattcaatat gggcgagggt
     8341 gattttgcca atcgcggcaa actgcccttg tcccaaatca tcagcaacct caaacaaacc
     8401 tactgcggcc acatcgcatt ggaatatatc tatattccca ataccgaaga gcgccgttgg
     8461 gtacgcaact attttgaaag cgtattgtcc acaccgcatt acaatgccga tcaaaaacgc
     8521 cgtatcttga aagagatgac cgctgccgag actttggaac gttatctgca taccaaatat
     8581 gtcggtcaga aacgtttcgg tgtcgaaggc ggcgaaagcg cgattgccgg tttgaactac
     8641 ctgattcaaa acgccggtaa ggacggcgtg gaagaagtca tcatcggtat ggcgcaccgt
     8701 ggccgtctga atgttttggt gaacattttg ggcaaaaaac ccggcgattt gtttgccgaa
     8761 tttgaaggcc gtgccgaaat caaactgcct agtggcgacg tgaaatacca tatgggcttc
     8821 agctccgata ttgccacccc tcacggcccg atgcacgttt ctttggcgtt caacccgtca
     8881 cacttggaaa tcgtcaatcc ggtagtggaa ggttctgcac gcgccaaaca aaaacgtttg
     8941 ggcgaaaacg gccgcgataa agtcttgccg gtattgattc acggcgattc cgcatttatc
     9001 ggtttgggtg tcaaccaagc aacattcaac ctgtctaaaa cgcgcggtta taccacaggc
     9061 ggtacggtcc atatcgtcat caacaaccaa atcggcttta ccacttccga tatccgcgat
     9121 acccgttcaa ccgtacactg taccgatatc gcaaaaatgg tttccgctcc ggttatccat
     9181 gtgaacggcg atgatcccga acgcgtttgc tttgccattc aagccgcttt ggattaccgc
     9241 aaaaaattcc ataaagacat cgtaatcgac gttgtctgct accgtaaatg gggtcacaac
     9301 gagggcgatg atccgacttt gacccaaccg atgatgtaca aaaaagtatc gcaacatccg
     9361 ggtgcgcgtg ctttgtacac cgagcaactg attgccgaag gcgtggtaac tcaagttgag
     9421 gccgacggtt acatccaagc ctaccgtgat gctttggaca aaggcgaaca tgttgagcaa
     9481 acaacgttga gcaacttcca acgcacacaa atcgactgga gcaaatacca aggtaaagat
     9541 tggcgcgaaa aaatcgaaac cggtttgcct gccgccgaca ttgagcgtct tactgagaaa
     9601 ttcaccgctg tgccggaagg ctttgccctg catccgactg caaaacgtgt gatcgaagcg
     9661 cgtaaagcca tggcatccgg caaacaagcc atcgactggg gtatggccga aaccctcgca
     9721 tacgcaagcc tgctgaccaa aggtcatggc gtgcgtatct ccggtgagga ctccggccgc
     9781 ggtacattct cacaccgtca tgccgttctg cacgatcaaa aacgcgaaaa atgggacgac
     9841 ggtacttatg ttcctcttcg caacatgggc gaaggcttgg gcgagttcct ggttatcgac
     9901 tctatcttga acgaagaagc cgtgatggcg ttcgagtacg gctttgcctg ctccgctcct
     9961 gacaagctga ccatttggga agctcaattc ggtgacttcg ccaacggcgc gcaagtaact
    10021 attgatcaat tcctgtcttc aggcgaaacc aagtggggtc gcttgtgcgg tctgaccacc
    10081 atcctgccgc acggctacga cggtcaaggc cctgaacact cttctgcacg cgtagaacgt
    10141 tggttgcaac tgtgttctga gaacaatatg caagtcatca tgccgtctga agcgtcgcaa
    10201 atgttccatc tcttgcaacg ccaagtcttg ggttcatacc gcaaaccgct ggtgattttc
    10261 atgtccaaac gcctgttgcg cttcaaaggt gcaatgagcc cgctggaaaa cttcaccgaa
    10321 ggttcgactt tccgtccggt tattggtgat accgccgaac gcgcaagcaa cgacagcgtg
    10381 aaacgcgtgg tattgtgtgc cggtcaggtt tactatgact tggaagccgg tcgagccgaa
    10441 cgtaaactgg aagatgatgt cgctatcgtc cgcgttgagc agctgtatcc gttcccatac
    10501 gacgaggtta aagccgaact ggcgaaatat ccgaacgcaa aatctgtggt ttgggcgcaa
    10561 gaagagccga aaaaccaagg cgcgttctac caaatccgcc accgcatcga agacgttatc
    10621 agcgaagagc aaaaactgtc ttatgtcggc cgtccaagca gcgcatcgcc tgcagtgggc
    10681 tactcaagca aacacattgc tcaattgaaa caattggttg aagacgcttt ggcgttataa
    10741 accaagtagc attccgtctg agtctgctca ggcggaatgc ccatatgcag aattaaaaac
    10801 acacaacagg ccgtctgaaa gggccattgg agacacaaaa tgattattga tgtaaaagta
    10861 cctatgctgt ctgaaagcgt atctgaaggc acactcttgg aatggaagaa aaaagttggc
    10921 gaagcagttg cccgtgacga aatcctgatc gatatcgaaa cggacaaagt ggttttggaa
    10981 gtaccttctc cacaagccgg cgtattggtt gaaatcgtag cgcaagacgg tgaaaccgtt
    11041 gttgccgacc aagttttggc ccgtatcgat acagctgcta ctgtcgctgc tgaagcacct
    11101 gcagccgctc ctgccgaagc tgccccggct gccgttcctg ctgctgcaca aaacaacgcc
    11161 gccatgcctg ccgctgcaaa actggctgcc gagaccggtg ttgacgtgaa cgtattgcaa
    11221 ggttccggcc gtgacggtcg cgtattgaaa gaagacgtac aaaatgccgc tgccaaacct
    11281 gccgcagccg tggcccctgc cgttgcactt cctgccggcg cacgtcctga agaacgcgta
    11341 ccaatgagcc gcctgcgtgc ccgtgttgca gaacgcctct tggcttctca acaagaaaac
    11401 gccattctga ctacattcaa cgaagtcaac atgaaaccga tcatggactt gcgtgcgaag
    11461 tacaaagaaa aattcgagaa agaacacggc gtaaaactgg gctttatgtc cttcttcgtt
    11521 aaagccgctg ttgccgccct gaaaaaatac ccggttgtga atgcttctgt tgacggcaaa
    11581 gacattgtgt accacggcta cttcgacatc ggtatcgcaa ttggcagccc acgcggtttg
    11641 gttgtaccaa tcctgcgcga tgccgaccaa atgagcattg ccgacatcga acaagcaatt
    11701 gttgattacg cgaaaaaagc caaagacggc aaaatcgcta tcgaagacct gaccggcggt
    11761 acattcagta ttaccaacgg cggtactttc ggttctatga tgtccacccc gatcatcaac
    11821 ccgcctcaat ctgcgatttt gggtatgcat gccactaaag agcgcgctgt ggttgaaaac
    11881 ggccaagttg ttgtccgtcc aatgatgtat ctggctctgt cttacgacca ccgtatcatt
    11941 gacggccgcg aagctgtatt gaccttggta gccattaaag acgcgttgga agacccggtc
    12001 cgcctgttgt tggatctgta atcgtttcag acggcttttt atttgttaat gaaaaggccg
    12061 tctgaatttt tatttagatg tagcgtaatg tagtatcgtg ctacaatagg ctcaacgaac
    12121 gattgaggcc gtctgaaaca tttgattcga atgaatcggc agatatggac tttcagacgg
    12181 ctttttctta aaaccatcaa aacgcagtca ttcaaaataa aaaaagaaac gaaaagtatc
    12241 gtttttattt tgagatactg ctaaaagcaa aggatgacac gatgtctcaa tatgatgtag
    12301 tagtgattgg tgcaggtccg ggcggatacg ttgccgccat ccgtgccgca caactgggtt
    12361 tcaaaactgc ctgtgtcgat gcaggcgtta acaaagcagg caatgcccct gcattgggcg
    12421 gtacttgctt gaacgtaggc tgtatccctt ctaaagccct gttgcaatcc agcgaacatt
    12481 tccacgctgc gcaacacgat tttgccgaac acggtatcac tgtcggcgac gtaaaatttg
    12541 acgtggccaa aatgattgag cgcaaagatg ccatcgtgac caaactgacc ggcggcgtga
    12601 aattcctgtt ccaaaaaaac aaagtaacca gcctgttcgg tactgcttcc tttgccggta
    12661 aaaatggcga tgcttaccaa attgaagtcg ataacaaagg cgagaaaacc gttatcgaag
    12721 ccaaacacgt catcgtagca accggttccg taccgcgtcc gttgccgcaa gtcgctatcg
    12781 acaacgtgaa cgtattggac aacgaaggcg cattgaacct gaccgaagta cctgccaaac
    12841 tcggcgtaat cggttccggt gtgattggtt tggaaatggg ttccgtatgg aaccgcgtgg
    12901 gtgcggaagt taccattctt gaagccgcgc cgaccttcct ggctgccgcc gaccaacaaa
    12961 tcgccaaaga agccttcaaa tacttcacca aagagcaagg tctgagcatc gaattgggtg
    13021 tgaaaatcgg cgacatcaag tctgaaggca aaggtgtttc cgttgcttac gaaactgctg
    13081 ccggcgaagc caaaaccgaa gtattcgaca aactgatcgt tgccatcggc cgtattccaa
    13141 acaccaaagg cctgaacgct gaagccgtag gcttggaaaa agacgagcgc ggctttatca
    13201 aagtggatgg cgaatgccgt accaacctgc ctaacgtatg ggcaatcggc gacgtggttc
    13261 gcggcccgat gttggcacac aaagccagcg acgaaggcgt tgccgttgcc gagcgcattg
    13321 ccggtcaaaa accgcatatc gacttcaaca acgtaccgtt tgtgatttac accgaccctg
    13381 aaatcgcttg ggtgggtaaa accgaagagc agctcaaagc cgaaggcgtg gagtacaaaa
    13441 aaggtacttc aggtttcggt gcaaacggcc gtgcattggc aatgggcaaa gccaaaggta
    13501 cggttaaagt gttggcagat gccaaaaccg accgtatctt gggcgtacac atgatcggcc
    13561 cggttgtcag cgaattggtt accgaaggcg tgactgcgct cgaattcttc gccagcagcg
    13621 aagatatcgc ccgtattatc catgcccacc caaccttgtc cgaagtggtt cacgaagctg
    13681 cattggcggc cgacaaacgc gctttgcacg gttgatagac attaaggccg tctgaaattt
    13741 tcagacggcc ttaaggcctc cggcaaattg aatgttccga gagcttcgtt ttctgattta
    13801 taattccgtc agacaaacag catttacatt cattatgaac aaagaaatag tcggtatttt
    13861 ctttataccg atgggcatca tcagcatgtg tatggctgca ttgtggcaga tgtatgtgat
    13921 gatgaccgaa acttatacgc tcaaccgttt caaagataaa gaattggttt ggcgcgtggc
    13981 attgttgttt atcagtttca gccttgccgt ttatctgctc tgtccgaatt cgcgtaaaaa
    14041 aggcatcgtc ttttttattc tcgggggagg cggtgcagtc atgtatctgc tggcgcggat
    14101 gtggttgccc ttcagtaaat agtaggaccg tctgaaaata tgggattggc cgcagggcga
    14161 ttcctaaaac ccactcacct taaggagaaa tccatgaatt tacacgagta tcaggctaaa
    14221 gaactgctgg ctagctacgg tttgcccgta caaggcggta ttttggcgca caacggcgaa
    14281 gaagccgctg cagcttacga caaattgggc ggcaaattcg ctgttgtcaa agcacaggta
    14341 cacgccggcg gccgcggtaa agcgggcggc gtaaaagtcg ttaaaagccg cgaaaaagcc
    14401 aaagaagtgg ctgaaagcct gattggcacc aacttggtaa cttaccaaac cgatgccaac
    14461 ggccaacctg tcaacagcgt tttggtttgc gaagacatgt accctgttca aaccgagctg
    14521 tacttgggcg cagtggttga ccgttctacc cgccgcgtta cattcatggc ttctaccgaa
    14581 ggcggcgtgg aaatcgaaaa agttgctgct gaaactccag aaaaaatctt caaagtaacc
    14641 gttgatccgc tggtcggcct gcaaccttgc caagctcgcg aagttgcctt ccaactgggc
    14701 ttgaaagaca aacaaatcaa cgagttcgcc aaactgatga ccggcgcgta caaagcgttt
    14761 gtcgaaaacg acttcgccct gtttgaagtc aacccgctgg cagttcgcga aaacggcgca
    14821 ctggcttgcg tggacggcaa aatcggcatc gacagcaacg cgctctaccg cctgccaaaa
    14881 atcgctgaat tgcgcgacaa atctcaagaa aacgaacgtg aactgaaagc ttctgaattc
    14941 gacctgaact atgttgccct ggaaggtaat atcggctgta tggttaacgg tgccggtttg
    15001 gcgatggcca ccatggacat catcaaactc aaaggcggcc aacctgccaa cttcttggac
    15061 gttggcggcg gcgcaaccaa agaccgcgtg gttgaagcgt tcaaactgat tttggaagac
    15121 aaatccgtta aaggcgtatt gatcaacatc ttcggcggta tcgtacgttg cgacatgatt
    15181 gcggaagcca tcgtggcagc cgttaaagaa atcaacgtca acgttcctgt cgttgttcgt
    15241 ttggaaggca acaacgccga actcggcgcg aaaatcctga acgaatcagg tctgaaactg
    15301 acttctgcag acggtctgaa tgacgcagcc gaaaaaattg ttgcagccgt aaacgcctaa
    15361 ggagaaaaga atgagcgtat tgattaataa agacaccaaa gtattggttc aaggtttcac
    15421 cggtaaaaac ggtactttcc actccgaaca agctctggct tacggcacta aagttgtcgg
    15481 cggcgttacc ccaggcaaag gcggtcaaac ccacctagac ctgcctgtat tcaacaccat
    15541 gaaagaagcc gttaaagaaa ccggcgctga cgcatccgtg atttacgttc ccgctccgtt
    15601 tgtgttggat tctatcgttg aagccgttga ttcaggcgta ggcttggtcg ttgtgattac
    15661 cgaaggcgtt ccaactctgg acatgctcaa agccaaacgt tacttggaaa ccaacggcaa
    15721 cggtacccgt ttggtcggcc ctaactgccc gggcgtgatt actccgggcg agtgcaaaat
    15781 cggcattatg ccgggccaca tccacactcc gggccgcatc ggtattattt cccgttccgg
    15841 tacattgact tacgaagccg tggcacaaac caccaaactg ggcttgggtc aatcaacctg
    15901 tatcggtatc ggcggcgacc cgattcctgg tatgaaccaa atcgacgcac tgaaactctt
    15961 ccaagaagac ccagataccg atgccatcat catgattggt gaaatcggtg gtactgcgga
    16021 agaagaagca gccgaataca tccaatccaa cgtaaccaaa cctgttgtcg gttacatcgc
    16081 cggtgttacc gctcctaaag gcaaacgcat gggccacgcc ggtgcgatta tctccggcgg
    16141 taaaggtact gccgaagaaa aattcgccgc gtttgaaaaa gccggtatcg cctacacccg
    16201 cagccctgcc gagttgggca cgacgatgct ggaagtgttg aaagcaaaag gtttggcata
    16261 atcaggtttg acaactgatt gaacatcaaa tgccgtctga aaccggaaat cgggtttcag
    16321 acggcatttt gtttgtcatt tcaaaaagag gcagcctcaa catactcaca ttatttttgc
    16381 cctttgaggc agtcagaata tagtggatta aaaacaaaat agtacaacac tcaacgttga
    16441 aggtctaacc atggcatact ctgcggactt aagaaacaaa gctttaaacc atagcggatt
    16501 aacaaaaatc aggacaaggc ggcgggccgc agacggtaca aatggtacgg aaccgatccg
    16561 cccggtgctt catcacctta gggaatcgtt ccctttgagc cggggcgggg caacgccgta
    16621 ccggtttttg ttaatccgct atacagcagg cgttggtgga aatcccgaat aagcggttca
    16681 aaacgtgtcg ctgccgcggc agccatatac agcgccttac gcaccgcaga ccttccgccg
    16741 aagcagcggc ttttgaattt ggtttccccg ctctccctcg ggtgcggggc aatgccgacc
    16801 aaacccgcta tccgtttgtg cgacagccgc cccaattcgg gcagcatcgc catcagcgta
    16861 gccgtcgtta tcgaaccgat gcctttgatt tgctccgcca cttgggcttt gccgtcaaaa
    16921 tgcgtgcggg tgtggttgtc gatttgtttg tccgattcgt caatcagccg gtcaaaacgg
    16981 gcaatcagtt gtttgacgct ttcgacttgc gtttcgtgaa cctgatgcag acattttgta
    17041 atagctgcca ttacgcctac taggatatat accttct
//
LOCUS       DAWXHA010000044        17053 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.044, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000044 DAWXHA010000000
VERSION     DAWXHA010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17053
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.044"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(246..578)
                     /locus_tag="AABD07_001064"
     CDS             complement(246..578)
                     /locus_tag="AABD07_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HFB2355613.1"
                     /translation="MQILSFQADIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCAMVERGEFDEVEEFDGDDDAWLEAAKDCGHH
                     GDACACGH"
     gene            759..1595
                     /gene="cysT"
                     /locus_tag="AABD07_001065"
     CDS             759..1595
                     /gene="cysT"
                     /locus_tag="AABD07_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HFB2355614.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     DGFRNTIAEPNVLAAVRLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALAALYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGSIPMISEILPLIITGKLEQFDAQGASAVALFMLLVSFVILFALNVLQWALGRRSGA
                     KG"
     gene            1784..2644
                     /gene="cysW"
                     /locus_tag="AABD07_001066"
     CDS             1784..2644
                     /gene="cysW"
                     /locus_tag="AABD07_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HFB2355615.1"
                     /translation="MKPYSANPNLTEPRRLRMLLIAAVLGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLSDPEAWSAVKLTLITALIVVPVNAVLGVAMAWLLIRFDFLGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGSRLEAQGIQIIFAIPGIVLTALFVTFPFAA
                     REIIPLMQTQGDSEEQAALVLGASGWQMFWRVTLPNIKWTLLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTIPLLVEIFYNEYNFTGAFSLSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            2641..3717
                     /locus_tag="AABD07_001067"
     CDS             2641..3717
                     /locus_tag="AABD07_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HFB2355616.1"
                     /translation="MSITIQNLNKKRFGNFHALKNINLNVPAGKLVSLLGPSGCGKTT
                     LLRIIAGLENADGGQILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTV
                     LPKPERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLL
                     LDEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQ
                     TGSAEAIYRKPENAFVTEFLGEADAFEGRIEKGIWHYNGFAWKLDAQYKWQEQTATGY
                     IRPHEWQIAAEHETPMIRAEIEKIHAVGALTHVLVKHGKQDVHITLAGSDAARYPIAE
                     GKKLNLIPKQVYVFSQNELIEYSI"
     gene            complement(3773..5299)
                     /gene="ilvA"
                     /locus_tag="AABD07_001068"
     CDS             complement(3773..5299)
                     /gene="ilvA"
                     /locus_tag="AABD07_001068"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HFB2355617.1"
                     /translation="MNTPLPYSDYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEQEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNGTFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTNNEIAKIHIRYMVGGRTDKVGHERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            5448..6617
                     /locus_tag="AABD07_001069"
     CDS             5448..6617
                     /locus_tag="AABD07_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HFB2355618.1"
                     /translation="MTAHKILPVLLPIILGVSHATAASPAPNRPTVHAAPTLQTPETL
                     TAAHIVIDLQSRQTLSAKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALCANDAALTLADRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLGREGQVSTAKDLSLLSEALMRDFPEYYPLFSIKSFKFENIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGHTIAEKEIVALENVEKRSRWQRLWTRLTGQ"
     gene            complement(6743..7315)
                     /locus_tag="AABD07_001070"
     CDS             complement(6743..7315)
                     /locus_tag="AABD07_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HFB2355619.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTAVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(7382..8365)
                     /locus_tag="AABD07_001071"
     CDS             complement(7382..8365)
                     /locus_tag="AABD07_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HFB2355620.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKGRGAEGVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            complement(8533..8608)
                     /locus_tag="AABD07_001072"
     tRNA            complement(8533..8608)
                     /locus_tag="AABD07_001072"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8573..8575),aa:Gln,seq:ttg)
     gene            complement(8616..9461)
                     /gene="ispE"
                     /locus_tag="AABD07_001073"
     CDS             complement(8616..9461)
                     /gene="ispE"
                     /locus_tag="AABD07_001073"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HFB2355621.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVGGIPQEADLSYRAASLLQKYARNLAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQWQLIDLGAALGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTYEGLTRDSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSKYGSAMMTGSGACIFAAFQARNSAYNIYRQVSGLYEAYLAEGLSKH
                     PLLSV"
     gene            complement(9471..10052)
                     /locus_tag="AABD07_001074"
     CDS             complement(9471..10052)
                     /locus_tag="AABD07_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization factor LolB"
                     /protein_id="HFB2355622.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGGTLGQLCQDRDGALAVDGKGNVYQAEGTE
                     DLSRQLVGFKLPIQYLHIWAEGRRVAGAPYRIRSDGILEQYGWTIGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            complement(10192..12036)
                     /locus_tag="AABD07_001075"
     CDS             complement(10192..12036)
                     /locus_tag="AABD07_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355623.1"
                     /translation="MIMLPARFTILSVLAAALLAGQAYAAGAADVELPKEVGKVLRKH
                     RRYSEEEIKNERARLAAVGERVNRVFTLLGGETALQKGQAGTALATYMLMLERTKSPE
                     VAERALEMAVSLNAFEQAEMIYQKWRQIEPIPGEAQKRAGWLRNVLREGGNQHLDGLE
                     EVLAQSDDVQKRRIFLLLVQAAVQQGGVAQKASKAVRRAALKYEHLPEAAVADAVFGV
                     QGREKEKAIEALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQ
                     EMEIMNLVSLRKPDDAYARLNVLLEHNPNANLYIQAAILAANRKEGASVIDGYAEKAY
                     GRGTGEQRGRAAMTAAMIYADRRDYAKVRQWLKKVSAPEYLFDKGVLAAAAAAELDGG
                     RAALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALIGLNNIIAKLSAAG
                     STEPLAEALAQRSIIYEQFGKRGKMIADLETALKLTPDNAQIMNNLGYSLLSDSKRLD
                     EGFALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGE
                     VLWALGERDQAVDVWTQAAHLTGDKKIWRETLKRYGIALPEPSRKPRK"
     gene            complement(12357..13193)
                     /locus_tag="AABD07_001076"
     CDS             complement(12357..13193)
                     /locus_tag="AABD07_001076"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HFB2355624.1"
                     /translation="MQIIHTIRELRTWRENIGKVAFVPTMGNLHEGHLALVREARKRA
                     DNVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLAAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPHLQNELCGKFRPGHFRGVATVVSKLFNIVLPDVACFGKKDYQQLAVIKGLTED
                     LNFDIEIVPVDTGRAADGLALSSRNRYLSVGERAEAPRLYRELQAVAESLKQGGLDYA
                     GLERQAADHLTAAGWLVDYVEIRRADTLEMARAGDKKLVVLAAARLGTTRLIDNVEVG
                     LP"
     gene            complement(13316..14107)
                     /gene="panB"
                     /locus_tag="AABD07_001077"
     CDS             complement(13316..14107)
                     /gene="panB"
                     /locus_tag="AABD07_001077"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HFB2355625.1"
                     /translation="MITVNTLQKMKAAGEKIVMLTAYESSFAALMDDAGVDVLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKVHDEAGAAVVLMECVPAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMRGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            complement(14249..14324)
                     /locus_tag="AABD07_001078"
     tRNA            complement(14249..14324)
                     /locus_tag="AABD07_001078"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14289..14291),aa:Thr,seq:tgt)
     gene            14490..15281
                     /locus_tag="AABD07_001079"
     CDS             14490..15281
                     /locus_tag="AABD07_001079"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HFB2355626.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     RPSELVLSYSRAMMGWLLFAERLPQHITQIGLGGGSFARWTDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGGKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDTLVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLAGLKASNPNNGKHFHL"
     gene            15336..15977
                     /locus_tag="AABD07_001080"
     CDS             15336..15977
                     /locus_tag="AABD07_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFB2355627.1"
                     /translation="MLKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQVRIPDLLLLIGAAVCHYTDRPEPSAVPNVAKTLMIHG
                     AEDEVVEIEKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(16056..16979)
                     /locus_tag="AABD07_001081"
     CDS             complement(16056..16979)
                     /locus_tag="AABD07_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFB2355628.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHSLFEPGKTMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPGGRFLRETLLTRLRLHPELQHLNVEDITPIHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLARGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDAFYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
BASE COUNT         4084 a         4976 c         4075 g         3918 t
ORIGIN      
        1 taaacaattc ccatcaagtc cgcgccgcaa cctgctataa taataagttt gcaacaaacg
       61 caaatcaatg ctttgcgttt gttgcagtcc caaaataatt gatgctgcct tattataata
      121 ccaagataat ttttattcaa taaaatacaa agggaagcgt tccgcccatt gcaaacagat
      181 gcaatccgcc gattatttaa aaaacggcaa agccttgcac cccttgcggc aagcctgcca
      241 tgcctttaat gtccgcaggc gcaagcgtcg ccgtggtgtc cgcaatcttt agccgcttcg
      301 agccacgcgt cgtcatcgcc gtcaaactct tccacttcgt caaactcgcc gcgttccacc
      361 atcgcgcaca actcttcaag gctttccgcc ccttccaccc aaaaacaggg aatgcccggc
      421 ggcgtatcgg gcgcaagcag tgccgccacg ccttcatgcc acgcaatcca atagccgttg
      481 tccgtacgga caaattgtgc gttttcgttg accgactcgc cttccgtacc ttccagcata
      541 cgttccgcaa tgtccgcctg aaaagataaa atctgcataa gtgttccttt atatgatggt
      601 tttccgtcaa aacaaagcgt tattttagaa catcgcgccc gcttaagaaa ctgccaaccg
      661 ctttataaca aattcgtctt tgcaccaaac tttccatttt ttccgttttt caggcggcat
      721 tgttaaagta atgcctttat tttccaccct taccgaccat gttaccgctc aaaacacccg
      781 gcgtactgcc cggcttcaaa ctcagcctcg gtctgaccgt attgtgcctg tcgcttctgg
      841 tggttttgcc gtttgcgatg atggcggcga aggcggcgga aatcggctgg gacggctttc
      901 ggaacacgat tgccgagccg aacgtgctgg cggcggtgcg gctgagtttg cggatgtcgt
      961 tttatgcgat gctgaccaat gtcgtgttcg gcacactggt ggcttgggtg ttggtgcgct
     1021 atgaatttcc gggcaagggc ctggcgaacg cgctggttga tttgccgttt gcgctgccga
     1081 cggcggttac gggtatcgcg ttggcggccc tgtatgcgcc caacggttgg ataggccgtt
     1141 ttttcgaacc tttgggcatc aaaatcgcgt ttacgcccgt cggcatttgg attgcgctgg
     1201 ttgtcgtcag cctgcccttt atcgtccgcg ccgtgcagcc ggtattggag gaattgtcgg
     1261 gcgaatatga ggaagcggcg gcgactttgg gcgcaaaccg tttcacaacg ttccgccgcg
     1321 tgctgctgcc ggaaatcacg ccggcactct tgaccggcgc gggcatgatg ttcgcgcggg
     1381 caacggggga atacggttcg gtgattttta tcgcgggcag cattccgatg atttccgaaa
     1441 tcctgccgct gattattacg ggcaagctgg aacaattcga cgcgcagggc gcgtcggcgg
     1501 tggcgttgtt tatgctgctg gtttcgtttg tgattctgtt tgcgctgaac gtgctgcagt
     1561 gggcgttggg caggcgttcg ggtgcgaagg gttgaggtcg tctgaaaacg aatccgctcc
     1621 ccaaaacaca gaattcgtag gtcggatact tgtatccgac aaacatttgc gattcagcaa
     1681 ccttgtcgga ttcaagaatc cgaccgacga aagctgaaac ccctcaatcc ctttcagacg
     1741 gcatccgaac accttaaaca acaaaccaga gaacaccacc gccatgaaac cctattccgc
     1801 caatcccaac ctgaccgaac cgcgccggct gcgcatgttg ctgattgccg ccgtgctggg
     1861 ctttctgctg ctgatgctgg tcgtgccgct cgtcgccgtg ttttacgaag ccttaaaagg
     1921 cggttgggat ttgtacctga aatccttaag cgatcccgaa gcgtggtctg ccgtcaaatt
     1981 gacgctgatt accgcactga ttgtcgttcc cgtcaatgcc gtcttgggcg tggcgatggc
     2041 gtggctgttg atccgttttg actttctcgg caagcagttg ctgaccaccc tgctcgattt
     2101 gccgttttcc gtatcgcccg tggttgccgg tttgatgttc gtcttattgt tcggcgcgca
     2161 cacggcgttg ggcagccggc tggaagcgca aggcatacag attatcttcg ccattcccgg
     2221 cattgttttg acggcgctgt tcgttacctt tccctttgcc gcacgcgaaa tcatcccttt
     2281 aatgcagaca cagggcgaca gcgaagaaca ggcggcattg gtactcggcg caagcggttg
     2341 gcagatgttt tggcgcgtta ccctgcccaa catcaaatgg acgctgctct acggcatcat
     2401 cctcaccaac gcccgtgcga tgggcgagtt cggcgcggtc agcgtggtat cgggacacat
     2461 acgcggcgaa accaacacta tcccgctttt ggtcgaaatc ttctacaacg aatacaactt
     2521 caccggcgca ttctccctct ccggcgtatt ggcactttta gcactggcga cgctggcggt
     2581 gcagaacatc atcaccaaat tacaagacaa aaaactcgcc gccgccgaaa ggaacgcagt
     2641 atgagtatta ccattcaaaa cttaaacaaa aaacgcttcg gcaattttca cgcgctgaaa
     2701 aacatcaacc tcaacgtccc cgccggcaaa ctcgtttccc tgctcggtcc ctccggctgc
     2761 ggcaaaacca cacttttacg cattatcgcc ggactggaaa acgccgacgg cggccaaatt
     2821 ctctttgacg gccaagacgt aaccgccaag catgtgcgcg agcgcaaagt cggtttcgtg
     2881 ttccaacact acgccctctt ccgccacatg aatgtgtttg acaacgtcgc tttcggtttg
     2941 accgtattgc ccaagcccga acgcccgtcc aaaggacaaa tccgcgccaa agtcgaagaa
     3001 ttgctcaaac tcgtacaact ctcccacctc gccaaatcct atccgcacca actctccggc
     3061 gggcaacgcc agcgcatcgc cctcgcccgc gcgcttgcgg tcgaaccgaa actcctgctt
     3121 ttggacgaac ccttcggcgc gctggatgcc aaagtgcgca aagaattacg cacctggctg
     3181 cgcgacattc atcacaacct cggcgtaacc agcattctgg tgactcacga ccaagaagaa
     3241 gccctcgaag tttccgacga aatcgtcgtg atgaaccatg gcaaaatcga acaaaccggc
     3301 agtgccgaag ccatttaccg caaacccgaa aacgccttcg ttaccgagtt cctcggcgaa
     3361 gccgacgcat ttgaaggacg catcgaaaaa gggatctggc attacaacgg cttcgcgtgg
     3421 aaattggacg cgcaatacaa atggcaggag caaaccgcca ccggctatat ccgcccgcac
     3481 gaatggcaga tcgccgccga acacgaaacc ccgatgatcc gtgccgaaat cgaaaaaatc
     3541 cacgccgtcg gcgcattgac gcacgttttg gtgaaacacg gcaaacaaga cgtgcatatc
     3601 acactggctg gcagcgatgc cgcgcgctac ccaatcgccg aaggcaaaaa attaaactta
     3661 attccgaaac aggtttatgt tttttctcaa aacgagttga ttgaatattc gatttaaccc
     3721 tgaaagcgca atgccgtctg aaaggctttc agacggcatt gcgtgtcaaa cgtcaggcaa
     3781 gaaacagctt gtacgcggca ttttgcgttt cctcgtgata gctgtatccc agactttcca
     3841 agaaaccgtc aaatgcggcg gcatcgtgcg gcggcacgtc gataccgacc aaaatccgcc
     3901 cgtaatccgc accgtggttg cggtaatgga agagcgtaat gttccaaccg ccctgcatat
     3961 ggttcaaaaa gcgcgccaac gcgcccggac gctccggaaa ctcaaaactg accagacgct
     4021 cgtgccctac tttgtccgtc cgccctccga ccatatagcg gatatggatt ttggcaatct
     4081 cattattggt caaatcgaca ttgggcaatc ccgcctcatc caaccggctg ccgataaccg
     4141 ccaaatcctg cgggcctgcc gcttgaagtc cgacaaagat atgcgctttt tcatcgtcgc
     4201 cgtagcggta gttgaactcg gtaatattcc tatttcccaa tatattgaca aacttaagga
     4261 agctgccgcg ttcttcgggg atggtaacgg caaaaatacc ttcgttgccc tcgcccaatt
     4321 cgctccgttc cgaaacgtgg cgcaaacggt gaaaattcat attcgcaccg ctggtaacgg
     4381 caatcagggt ttggttttcc gcaccttctc gggcaatata ggctttcaga cccgccaacg
     4441 ccaacgcccc ggccggctcg gtaatgctgc gcgtgtcatc gaaaatatcc ttgaccgcgc
     4501 cgcaaaccgc atcggtatcg actgtaatga tttcatccaa aagttctttg cagaggcgga
     4561 aggttccgtt tccgacgact ttgaccgccg taccgtctga aaacagcccg acatctttca
     4621 aatggacgat ttcgcccgct tcgaccgact gcttcataca gcaggaatcg ttggtctgta
     4681 cgccgataac tttaatttcg ggacgaacct gtttgataaa tgccgccacg cccgccgcca
     4741 aaccgccgcc ccctatcggt acgaatacgg cgcggattgg atcgggatgc tggctgacaa
     4801 tttccatccc caccgtcccc tgtcccgcaa tcacatcggg atcgtcaaac ggcgcgatat
     4861 aggtcagccc ttcctgttcc gccagctcca tcgcataatc gtaggcatcg ttgtatgaaa
     4921 caccccgcaa aaccacctcg ccgccacggc ttttaaccgc atccacttta attttcggcg
     4981 tagtctccgg catgacgata acggcacggc agcccaaacg ctgtgcggac aacgccacgc
     5041 cttgtgcgtg attgcccgcg cttgccgcaa tcacgccgca agcgagcgca tctttcggca
     5101 acttggacat tttgttgtac gcgccgcgta ttttgaacga aaaaaccggc tgcaaatctt
     5161 cgcgtttcaa aaggatgttg tttttcaaac gtacagaaag gctgcgtgcc ggttccaaag
     5221 gcgtttcgac cgctacatca tagacagatg ccgtcaggat gcggatgagg taatcggaat
     5281 aaggaagggg cgtgttcata attcaatgcg ggataatcgg tttattaaaa tcgcaaaacc
     5341 caaaaccata cgcccaagac ggcgcgaaag caagaaaaat ccgcccgatc agacacccta
     5401 agcgtataat cggcaggctg aaacactcac acaatttaga atatttcatg acagcacata
     5461 aaatcctgcc cgtccttctt cccatcatct taggcgtttc tcacgcaacg gctgcatcgc
     5521 ccgcgcccaa cagaccgacg gtacacgccg cccccacgct ccaaacaccc gaaaccctca
     5581 cggcggcaca catcgttatc gaccttcaaa gcaggcagac tttatccgcc aaaaacacca
     5641 atacccctgt cgaaccggcg gcactaaccc aactgatgac cgcatatttg gttttcaaaa
     5701 acatgaaatc gggaaatatc caatctgaag aaaacttaaa aatacccgaa tccgcatggg
     5761 cttcagaagg aagcagaatg tttgtacgtc ccggcgatac ggtcagcacc gacaaactct
     5821 taaaaggcat gattgcccta tgcgcaaacg atgccgccct aacccttgcc gaccggctgg
     5881 gcaacggctc gattgaaaat tttgtgcaac aaatgaacaa agaagcccga cgcttgggca
     5941 tgaagaacac cgtattcaaa aacccgacag gcttgggtag agaaggacag gtttccaccg
     6001 ccaaagacct ctccctgctg tctgaagcat tgatgcgcga ctttccggaa tattacccgc
     6061 tgttttccat caaatcgttc aagtttgaaa acatagaaca aaacaaccgc aatatccttt
     6121 tatataggga caacaatgta aacggcctga aagccgggca cacagaaagc ggcggctaca
     6181 accttgccgt gtcatactcc ggcaacggca ggcacatcct tgtcatcaca ctaggttcgg
     6241 aatcggcgga aacccgcgca tcggacaaca gcaagctgct gaaccgggca ttgcaggcct
     6301 tcgatacgcc caaaatatat ccgaaaggca aaaccgttgc ccaaatccaa atttccggag
     6361 gcagcaaaaa aaccgtccgc gcaggctttc tcaaagaagc ctacatcact ctgccacata
     6421 aagaagcgaa aatggcagaa cagattttgg aaaccataca gccgattccc gccccggtaa
     6481 aaaaagggca gattttagga aaaatcaaaa tcaggcaaaa cggacatacc attgccgaaa
     6541 aagaaatcgt cgcactggaa aatgtagaaa aaagaagccg gtggcaaagg ctttggacgc
     6601 gtctgacagg gcagtaatct gccgtttcaa atatcccgct tttccaacaa ataaagaaat
     6661 gccgtctgaa acacggttca gacggcataa aacaacaggg cggtacgtat tgcatacgcg
     6721 ccgccctgct gatggaagta agttagcgct ttttaccggt aacggtagca acagccagat
     6781 tttcgttacg tttcagggaa acgctttcta caccttcagg cagtttgatg tctgacaagt
     6841 gcaaaatgtc gccggcaacc acttcggcac aatccaaatc caagaaagca gggatattgg
     6901 caggcaacgc aaccacttca acagccgtgt tcagcagaga tacgcgaccg ccttgcaatt
     6961 taacggcttg agaattttca gcgttaacaa tgtgcagggg aacgcggatg cgtacaagtt
     7021 gatcggcttt cacagcttgg aagtcgatgt gttggacttc gcggcggaac gggtgcattt
     7081 ggaaatcgcg gacgataacg tctttggttt cgccgttcag agacaattta atcaacgcag
     7141 tatggaaaga ttctttttcc agtgcgtaga atacggtttt gtgatctacg gcaatcgcaa
     7201 cgggctcttg accttcaccg tacagaatac cggggatttg gccttcgcga cgcaggcggc
     7261 ggctcgcacc agtgccttgt gcttcacgaa cagaggcttg aatttcataa gtcatgttaa
     7321 atactccaag ttaggtaaaa tcgtcgtcat cggccgcgac cagcttaaga cggcatcggg
     7381 gttacggcag caacatgctg cctgtcatca cttcttcatt gaaaagatat gagacggatt
     7441 cttcattgct aatgcggcgg acggtttcgg ccaacaaacc tgcaatcgtt acctgacgga
     7501 tacggtcgca gtttttagcc gcttcagaca aaggaatggt atcggttacg accacctggt
     7561 cgatttcgga tgaggcaata cggctgaccg cctctccgga gaatacagcg tggctggcat
     7621 aggctagaac accttccgcc ccccgccctt tcagggcgac ggcggctttg cacagcgtat
     7681 ttgcagtgtc gatcatatcg tccacaatca gacaggttct gccttgaata tcgccgatga
     7741 tgttcataac ttccgccaca ttggctttcg ggcggcgttt gtcgatgatt gccaagtcgg
     7801 cattcaagga ttttgccacg gcgcgggcgc ggacgacacc gccgatgtcc gggctgacga
     7861 cggtcagatt ttcaatccgc tgttgcttga tgtcgttcaa cagaatcggg gtggcataaa
     7921 tattgtccac cggaatatcg aagaaacctt gaatctggtc ggcatgcaaa tcgacagtca
     7981 aaacacggtc gatccctgcc gaatacagca tatttgccac cagtttggca gaaatcggaa
     8041 cgcggacgga acgcggacgg cggtcttggc gcgcatagcc gaaatacgga atggctgtgg
     8101 taatacgacc tgccgaagca cgcttcagtg catccgccat cgtcaggatt tccatcaggt
     8161 tgtcattggt cggcgcacag gtcggctgaa ggatgaaaac gtcgcgcccg cgtacgtttt
     8221 ccaacagttc gacggcaact tcgccgtctg aaaacttgga tacggaagca ttgcccaaag
     8281 aaatgtccaa atgcctgaca acacgttgtg ccaattcggg attggcattg cctgtaaata
     8341 ccatcaaact gtcgtacgca gccatattct cacctgattt tatgtttaac ttccgctcag
     8401 aaaacacaat gcttccctcc gcttgtacca agcccggcat tatacctgca acatccgaca
     8461 caaacaaagg cgtttcaata tttttatttc tatgaaataa aaagcgtgta agcaggctta
     8521 cacgcttttg tctggctggg gaggaaggat tcgaaccttc gcatgctgga atcaaaatcc
     8581 agtgtcttaa ccgcttgacg actccccaac aatgtttata cggacaacaa aggatgtttt
     8641 gaaagaccct ctgccaaata tgcctcgtac aaacctgaaa cttgtcggta tatattgtat
     8701 gcgctattcc tagcttgaaa tgctgcaaat atacaggctc ctgagccggt catcattgca
     8761 gaaccgtatt tcgacaactc ggaataagct ttccaaactt cagggtattc tttaaatacc
     8821 actgcctgca tatcgtttct gaacggttgc aggttttgga aagtcggcat tatgcttgag
     8881 gcagaatccc gtgtcaagcc ttcgtatgtg aaaatttttg cggtggaaac gtggacggga
     8941 ggtttgacaa taacatacca ctgtttcgga atatccattc ctatcagttt ttcacctatc
     9001 ccgcttgcaa aagcattttt tccgaaaata aaaaacggta cgtccgcacc caaagccgca
     9061 cccaaatcaa tgagctgcca ctgcgtcaaa ccacactgcc accaacggtt caacaccagc
     9121 aaaaccgttg cggcatcgga actcccccct cccaagccgg cgccggtcgg gatttttttg
     9181 tccagccata tttccacgcc ggcaaggttg cgcgcatatt tttgcagcaa cgatgcggca
     9241 cggtagctca aatcggcttc ctgcggtatt ccgccgacag gattgtgcag gatgattttg
     9301 ccgtcgtccc tcggtttcaa atatacggta tcctgcaaat ctatcaggca gaatatgctt
     9361 tcgatattgt gataaccgtc ttcccgcctg ccggtaatcc tcaaatcgag attcagtttt
     9421 gcaggtgcgg gaaacgcctg ccgtccgtcc gcaatattca tctgtccgcc ttatctcgtg
     9481 cgcgccgcac agcgttccgg ggtttcggtt tcagacggca ttccaatttc ggtgaaaacc
     9541 agcctgatgt tcaaatttcc gttattcagt tgcaacgttc ggacttgccc cccactgtcg
     9601 gcggttctgc cgattgtcca accgtattgt tccaatatgc cgtctgaacg gatgcggtaa
     9661 ggcgcgcccg ccacacgcct gccttccgcc cagatatgca gatattggat tggcagtttg
     9721 aaaccgacca gctgcctgct caagtcttcc gtaccctctg cctgatagac atttcctttg
     9781 ccgtccactg ccaatgcgcc gtccctgtct tgacacaact gtccgagcgt gccgcccaaa
     9841 ggggtgttga tattgatggt ttccacgggc ggttggtatg tccaatcgaa atttgcatac
     9901 gaacctttcc cttccgcttt gactgccaac cgcccttccg ctgcaaaact gctgatgtgt
     9961 tcggacggct gccacaggtt ttcgttattt tgaggtaatt gcgcgcaagc ggtcaaaagc
    10021 aggatgaccg atgcggatac ggtgtgtttc atcagagttt ccttaacggg tgtcatcctg
    10081 ccggccgacg ggtgcggcgt gccgtgcaaa acgcgtgcga actgcgtgcc gtttgcccga
    10141 atgccccggc ttcccggcaa accttatgcc gtctgaaagg atgggcctgc attatttccg
    10201 gggttttcgg gaaggctcgg gcaaggcgat tccgtagcgt ttgagcgtct cccgccatat
    10261 tttcttgtct cccgtaaggt gtgccgcctg cgtccatacg tcaaccgcct gatcgcgttc
    10321 gcccaatgcc cacaacactt cgcccaaatg ggcggcaact tcgggctcgg ggtcgttttc
    10381 aaacgaatac cgcagatacg gcagcgcgct ttccgcgtcg cctttcaggt aatacgccca
    10441 gcctatgctg tcgttaacgg cggtatcgtc cgggttgatt tggtatgccg tctgaagcag
    10501 ggcgaaaccc tcgtccaaac gtttggaatc ggaaagcagg ctgtagccca gattattcat
    10561 aatttgtgca ttatcgggcg taagtttgag cgcggtttca aggtcggcaa tcatttttcc
    10621 ccgtttgccg aactgttcgt aaataatgga acgctgtgcc aatgcttccg ccaaaggttc
    10681 cgtgcttccc gccgccgaaa gtttggcgat gatgttgttc agcccgatca gggcttcccg
    10741 tttgtcgggc agcttcgaca gggcgagcat ctgtattttg gacaaattgt ctgccgtaaa
    10801 ataccgcccc tgctgttcgg gaagtttccg caccctgccg atctgccgca aagccgcccg
    10861 gcctccgtcc aattcggcag ccgccgcagc cgccagcacg cctttgtcga acaggtattc
    10921 cggcgcggac acttttttca accactgcct gactttggcg taatccctgc ggtcggcata
    10981 tatcatcgcc gccgtcattg ccgccctgcc ccgctgttcc cccgtccccc tgccgtatgc
    11041 cttttcggcg tagccgtcga taacggacgc accttctttt cggtttgccg ccaatatcgc
    11101 cgcctgaata tacaggtttg cattcgggtt gtgttccaac agcacgttca aacgcgcata
    11161 ggcatcatcc ggcttacgca gggaaaccag attcataatt tccatttcct gccagacggc
    11221 cgaaaggttt tgggtgtctg tctgctcgaa aaagccgtcg agtatttcgg gatatttgcg
    11281 tgcagtcaga cgcaacgtca ttaaagtggg gggcaatatt tccgtatcga gcttcgccaa
    11341 acgctgcaaa gcttcgattg ccttttcctt ttcgcgtccc tgtacgccga acaccgcatc
    11401 ggcaaccgcc gcttcgggca gatgttcata cttcaacgcc gcacggcgaa ccgctttcga
    11461 tgctttttga gccaccccac cctgctgcac ggcggcttgc accagcagca aaaatatcct
    11521 gcgtttttgc acatcgtccg attgcgccag cacctcttcc aacccgtcca gatgctgatt
    11581 tcccccttcc ctcaatacgt tccgcagcca ccccgcccgt ttttgcgcct cacccggtat
    11641 aggctcgatc tgccgccatt tctgataaat catttccgcc tgttcaaacg cgttcagcga
    11701 cacggccatt tccaaggcgc gttcggcgac ttcgggggat tttgtgcgtt ccaacatcag
    11761 catataggtt gccagagccg ttcccgcctg ccctttctgc aaagccgttt caccgcccaa
    11821 cagcgtaaac accctgttga cccgttcgcc cactgccgca agccgtgcgc gttcgttttt
    11881 gatttcttcc tcgctgtaac gccgatgttt ccttaaaacc tttccgactt ccttcggcag
    11941 ctccacatcc gccgcgccgg cagcatacgc ctgtccggca agcagggctg ctgcgaggac
    12001 agataaaata gtgaaacggg cgggtaacat aatcatcctt tatccgacat ccgtccgaac
    12061 cttcagacgg catattgagt atctagacaa ggcgtcactt tatcacaagc caaacggttt
    12121 gtagatttgc aaaacccgcc cgaaggcagg gctgtgtttt gagattgcgt cggtttgcct
    12181 gtatgcgatg ccggacaatc cttgccttat tatttggttt gacagtttaa tttgttgaac
    12241 aaaaagaaat ttatttcatt ccgtctattt tccgacatta ttccgaagca cagccgacgg
    12301 caaaatgccg tctgaaacgc aaatccgctt caggcggcat tcccggctcc ggcgggctaa
    12361 ggcaggccga cttccacatt gtcaatcaga cgcgtcgtcc ccagacgggc ggcggccaag
    12421 accaccagtt tcttatctcc cgcccgcgcc atttcgagcg tatcggcgcg gcggatttcc
    12481 acataatcga ccagccagcc cgcagcggtc aaatggtcgg cagcctgccg ctccaaaccc
    12541 gcataatcca aaccgccctg cttcagcgat tcggcaacag cctgcagctc gcggtacagg
    12601 cgcggtgctt cggcgcgttc cccaacgctc aagtaccggt tgcggctgga gagtgccaaa
    12661 ccgtccgccg cccgccccgt atcgacgggg acaatttcga tatcgaaatt caaatcctcg
    12721 gtcaaacctt taatcacggc aagctgctgg taatcttttt tgccgaaaca ggcaacatcc
    12781 ggcaaaacga tattgaacag cttggacacc accgtcgcca cgccgcgaaa atggccgggg
    12841 cggaatttgc cgcacaattc gttttgcaaa tggggcggtt cgacgttgta acgctgttcc
    12901 acgttcggat agagttcttt ctcatcgggc gcgaaaacaa cggcaacgcc ttcggcggca
    12961 agtttgtccg catcctgttg caaagtacgc ggatatttgt cgaaatcctc gccctgaccg
    13021 aattgcaagc ggttgacgaa tatgctgaca acaacgttgt cggcgcgttt tctggcttcg
    13081 cgaacaaggg caagatgccc ttcatgcaga ttgcccatgg tcggcacaaa tgccaccttt
    13141 cctatatttt cacgccacgt gcgcagttct cgaatggtat gtatgatttg cattacggta
    13201 atccttatcc ttcgggcttc ctgcccgaca aaacgcgccg attatacgcg ccgcgcacgg
    13261 caaaacaaaa tgccgtctga aacggctttc agacggcatc ggcagcagac cttgttcaat
    13321 ctgcaaaaat atgttccgca gcagggaagg ttttggcttt gacttcggca acatacgccc
    13381 gaaccgcagc ctggatgctg ctttgcccgc gcataaagtt tttgacgaat ttcgccgttt
    13441 tgcccgggaa aataccgagc atatcgtgca tcaccaaaac ctgaccgtcg caatccgcgc
    13501 ccgccccgat gccgatggtc ggacaggaaa cagtttcagt tacctttttt gccagttccg
    13561 ccggcacgca ttccatcagt acgacggcag ctccggcttc atcatgcacc ttggcatcgt
    13621 taagcaacgc ctgcgccttg ccgccgcgcc cctgaacttt atatccgccg aaggcaaaca
    13681 cggattgcgg ggtcagaccg atgtgggcac agaccggaat tccgcgcatt tgcagaaatt
    13741 cagtcgtttc cgccatccac acgccgcctt cgagtttgac catatgcgcg ccggcagcca
    13801 tcagttcggc ggcggcggca aacgcctgct ccttactctg ctgatatgca ccaaacggca
    13861 aatcgctgac aatcatcgca ttttttgcac cgcgtgctac acattcggtg tgatagcaca
    13921 tatcgcgcag gctgaccggc agcgtcgact gtcgcccctg aaccgccatt cccaaagaat
    13981 ccccgaccaa cagcacatcc acgccggcat cgtccatcag cgcggcaaaa ctggattcgt
    14041 aagcggtcag cataacgatt ttctcgccgg ccgccttcat tttttgcagt gtgttcacag
    14101 taatcatcag atattgttac cccgcccttt tcagacggcc ttttcagttt gaaacgggct
    14161 attatagtga aatgcccgca gccctgccac cgaccgtgcc gcaaatgcaa aacagcccga
    14221 ctgttttaca caatcgggct gtcaaatctg gtgccggcac caagagtcga actcgggacc
    14281 ccctgattac aagtcaggtg ctctaccaac tgagctatac cggcaaagaa ggcgaattat
    14341 gcaggcaact tcacactttg gcaagaaatt tgttcgaccc cctcataaaa atacactaag
    14401 tatcttattt aaaacaaaat taatttgaaa cagaacaagc atcggcattc tgataaaata
    14461 tccgcctttc aaaccgaccg ttcacaccga tggcaagaca tccctaccgc cgcctgcgtc
    14521 ctgcaaaatc cggctttccc gaagtcggta tttccgaaga aggcaatatc cgttcgcttc
    14581 acttgggcag cgacaccgtt caaagctcga tgaacctcga ccgcccgtcc gagctggtgc
    14641 tctcttacag ccgcgcgatg atgggctggc tgctgtttgc ggaacgcctg ccgcaacata
    14701 tcacccaaat cggcttgggc ggcggttcgt ttgcacgctg gacagacacc tacctgcccg
    14761 acacgcgcca aaccgccgtg gacatcaatc ctcaggtcat cgccattgcc cgcaacctgt
    14821 ttgagttgcc tttcgagggc ggaaaatttg aaattatcga agcagacggt gcggaataca
    14881 tcaaagtctt ccgccacaac accgatatca tcttggtgga cggattcgac ggcgaacaaa
    14941 tcatcgatac gctggttgaa gaaccgtttt tcagagactg ccgcaacgca ctctcttcag
    15001 acggcatatt cgttaccaac tggtggagcg gcgacaaacg ctatcaacgc ttcatcgaac
    15061 ggttgttgag cgtttttgaa gggcgcgtat tggaacttcc tgccgaaagc cacggcaatg
    15121 tcgcggtaat ggccttccaa agcagcccca aagagcaaaa catagacaaa ctcaaaaaac
    15181 gtgccgacaa actgagcaac gcatacggat tggacttcca ccgcatgctc gccggcctga
    15241 aagcgtccaa ccccaacaac ggcaagcatt tccaccttta agccgccatc ttcgcggctg
    15301 catcggaata tgcggaaaat caagaggaaa ccattatgct gaaacccgaa accatacaca
    15361 tacccggccc tgccggcatt ttagaaacca tccatatccc gtccgaacaa gtaccggcac
    15421 gcggtgttgc cgtcatcaac caccccaacc ccctccaagg cgggacgaac accaacaaag
    15481 tcatccaaac cgccgccaaa gcattgagca agctcggctt ccactgctac cttcccaacc
    15541 ttcgcggcgt aggcggcagc gaaggcacac atgattacgg acgcggcgaa acgcaagact
    15601 gcctcgccgt catcgactat gcccgcgccc aacatcccga agccccggaa tttgccttat
    15661 ccggcttttc cttcggcggc tatgtcgcca catttgccgc acaagtgcgc atacccgatt
    15721 tattgctgct catcggtgcg gcagtctgcc actataccga ccgccccgag ccgtccgccg
    15781 ttcccaacgt tgccaaaacg ctgatgatac acggcgcgga agatgaggtc gtcgaaatcg
    15841 aaaaagcact gaaatgggca gaaccgcaag atttgcccgt cattaccatc gccggttcga
    15901 cgcacttctt tcacggcaaa ctcatcgtcc tgcgcgacac catcctccgc ttcgcacccg
    15961 tatgcctgaa cggataaagc ccctttcaga cagcatcgat aatatcaaac ccgtatccgg
    16021 cggcatctgc cgatacgggt ttgcgttccc tctcattaca ggcaaaaccc gctgcaaaac
    16081 accctttccc gacccgacaa aggatctgca aacgcaatct tttttgccaa aagcttcaaa
    16141 ggtttccgat aatcctcgct acccgcttca gacggcacgg gatagaacgc gtcattcaac
    16201 agcggcatac ccaaacccat catatgcacg cgtaactggt gtttcttgcc ggtatgcggc
    16261 gtgaggcggt aaaggctgaa ttcccccctg ttttcaatca gttcgaccgt cgtatgtgcg
    16321 tttggttcgc cttcggcctc ttgcgtcgta aaaaatttct cccccctcgc caaacgcgaa
    16381 accacatcga gcggatacgg caaatccgtc cttgtcggcg caagcgcctc atacgttttc
    16441 cataccgttt tgttttgaaa catcgtctga taagccccgc gcgtggcagg attgtgcgac
    16501 agcagcatca cacccgccgt atccttgtcc aagcggtgaa tcggcgtaat gtcttcaaca
    16561 ttcaaatgct gcaattcagg gtgcaggcgc agacgtgtga gcagcgtttc ccgcaaaaaa
    16621 cgcccgccgg ggatgacggg cagaaaatgc ggcttgtcca ccacaatcaa atgctcatca
    16681 atatgcaaaa ttttttcttc aaacggaata cgcggctcat cctcactgct ggtttcccga
    16741 taataaaaca tcgtcttacc cggctcgaac aaagaatgtt catccaacgc cgcaccatcc
    16801 gaaccgacca caaaaccgct gttcaaccgc ctccgccaat cgtccgcacc cacaaaagga
    16861 aagcggatgc acagaaaatg cagcagcggc agcccgtaaa actgcttttc atgcggcagc
    16921 accaaataac tgggtttgac accgttcaac agcggaagag gattattgcg ttttttcata
    16981 cggcggattg taaccgtttt tcacaaactt ttcagacggc atatcaaaac ataattgata
    17041 aaaacaaata tat
//
LOCUS       DAWXHA010000045        17041 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.045, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000045 DAWXHA010000000
VERSION     DAWXHA010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17041)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17041)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17041
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.045"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            408..1052
                     /gene="rplC"
                     /locus_tag="AABD07_001082"
     CDS             408..1052
                     /gene="rplC"
                     /locus_tag="AABD07_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HFB2355629.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGVAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            1052..1672
                     /gene="rplD"
                     /locus_tag="AABD07_001083"
     CDS             1052..1672
                     /gene="rplD"
                     /locus_tag="AABD07_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HFB2355630.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLARDERLFVIEALTAETPKTKVFAEQVKNLALEQVLFVTKRLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1663..1983
                     /gene="rplW"
                     /locus_tag="AABD07_001084"
     CDS             1663..1983
                     /gene="rplW"
                     /locus_tag="AABD07_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009426082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HFB2355631.1"
                     /translation="MGMNQQRLTQVILAPVVSEKSNVLAEKCNQMTFKVLANATKPEI
                     KAAVELLFGVQVASVTTVTTKGKTKRFGRILGRRSDVKKAYVSLADGQELDLEAAAAA
                     ADKE"
     gene            1989..2822
                     /gene="rplB"
                     /locus_tag="AABD07_001085"
     CDS             1989..2822
                     /gene="rplB"
                     /locus_tag="AABD07_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HFB2355632.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGISAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGVVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2828..3106
                     /gene="rpsS"
                     /locus_tag="AABD07_001086"
     CDS             2828..3106
                     /gene="rpsS"
                     /locus_tag="AABD07_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011137729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HFB2355633.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAVRASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3115..3444
                     /gene="rplV"
                     /locus_tag="AABD07_001087"
     CDS             3115..3444
                     /gene="rplV"
                     /locus_tag="AABD07_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HFB2355634.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3454..4146
                     /gene="rpsC"
                     /locus_tag="AABD07_001088"
     CDS             3454..4146
                     /gene="rpsC"
                     /locus_tag="AABD07_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HFB2355635.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVIIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPIHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4130..4546
                     /gene="rplP"
                     /locus_tag="AABD07_001089"
     CDS             4130..4546
                     /gene="rplP"
                     /locus_tag="AABD07_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HFB2355636.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4546..4737
                     /gene="rpmC"
                     /locus_tag="AABD07_001090"
     CDS             4546..4737
                     /gene="rpmC"
                     /locus_tag="AABD07_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HFB2355637.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4737..5000
                     /gene="rpsQ"
                     /locus_tag="AABD07_001091"
     CDS             4737..5000
                     /gene="rpsQ"
                     /locus_tag="AABD07_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HFB2355638.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHSLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5222..5590
                     /gene="rplN"
                     /locus_tag="AABD07_001092"
     CDS             5222..5590
                     /gene="rplN"
                     /locus_tag="AABD07_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HFB2355639.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAVPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5602..5925
                     /gene="rplX"
                     /locus_tag="AABD07_001093"
     CDS             5602..5925
                     /gene="rplX"
                     /locus_tag="AABD07_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HFB2355640.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGGKVVVEGVNVVKRHQ
                     KPNPMRGIKGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5935..6474
                     /gene="rplE"
                     /locus_tag="AABD07_001094"
     CDS             5935..6474
                     /gene="rplE"
                     /locus_tag="AABD07_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HFB2355641.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLERIAGQRPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6477..6782
                     /gene="rpsN"
                     /locus_tag="AABD07_001095"
     CDS             6477..6782
                     /gene="rpsN"
                     /locus_tag="AABD07_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HFB2355642.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6798..7190
                     /gene="rpsH"
                     /locus_tag="AABD07_001096"
     CDS             6798..7190
                     /gene="rpsH"
                     /locus_tag="AABD07_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HFB2355643.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7204..7737
                     /gene="rplF"
                     /locus_tag="AABD07_001097"
     CDS             7204..7737
                     /gene="rplF"
                     /locus_tag="AABD07_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HFB2355644.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKKLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVASEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7751..8104
                     /gene="rplR"
                     /locus_tag="AABD07_001098"
     CDS             7751..8104
                     /gene="rplR"
                     /locus_tag="AABD07_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HFB2355645.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8123..8641
                     /gene="rpsE"
                     /locus_tag="AABD07_001099"
     CDS             8123..8641
                     /gene="rpsE"
                     /locus_tag="AABD07_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HFB2355646.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8634..8819
                     /gene="rpmD"
                     /locus_tag="AABD07_001100"
     CDS             8634..8819
                     /gene="rpmD"
                     /locus_tag="AABD07_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HFB2355647.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLCRREHTVEVLDTS
                     ENRGMINKISYLLKVES"
     gene            8821..9255
                     /gene="rplO"
                     /locus_tag="AABD07_001101"
     CDS             8821..9255
                     /gene="rplO"
                     /locus_tag="AABD07_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HFB2355648.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTVSANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEDVGGKIEM"
     gene            9267..10577
                     /gene="secY"
                     /locus_tag="AABD07_001102"
     CDS             9267..10577
                     /gene="secY"
                     /locus_tag="AABD07_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HFB2355649.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQSTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGAFYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10582..10800
                     /gene="infA"
                     /locus_tag="AABD07_001103"
     CDS             10582..10800
                     /gene="infA"
                     /locus_tag="AABD07_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HFB2355650.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10821..10934
                     /gene="rpmJ"
                     /locus_tag="AABD07_001104"
     CDS             10821..10934
                     /gene="rpmJ"
                     /locus_tag="AABD07_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006297867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HFB2355651.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDPRHKQRQG"
     gene            11000..11362
                     /gene="rpsM"
                     /locus_tag="AABD07_001105"
     CDS             11000..11362
                     /gene="rpsM"
                     /locus_tag="AABD07_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HFB2355652.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11382..11777
                     /gene="rpsK"
                     /locus_tag="AABD07_001106"
     CDS             11382..11777
                     /gene="rpsK"
                     /locus_tag="AABD07_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019959419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HFB2355653.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGTGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11797..12417
                     /gene="rpsD"
                     /locus_tag="AABD07_001107"
     CDS             11797..12417
                     /gene="rpsD"
                     /locus_tag="AABD07_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HFB2355654.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12443..13429
                     /gene="rpoA"
                     /locus_tag="AABD07_001108"
     CDS             12443..13429
                     /gene="rpoA"
                     /locus_tag="AABD07_001108"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HFB2355655.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVGGVQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKSPPIDPVLLHPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13453..13821
                     /gene="rplQ"
                     /locus_tag="AABD07_001109"
     CDS             13453..13821
                     /gene="rplQ"
                     /locus_tag="AABD07_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009115879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HFB2355656.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLASRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13968..14681
                     /gene="minC"
                     /locus_tag="AABD07_001110"
     CDS             13968..14681
                     /gene="minC"
                     /locus_tag="AABD07_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HFB2355657.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAVAMKYHLLFCL
                     SHSENVKELGQVEVQKTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVNQGAEL
                     IADGNMHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14710..15525
                     /gene="minD"
                     /locus_tag="AABD07_001111"
     CDS             14710..15525
                     /gene="minD"
                     /locus_tag="AABD07_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HFB2355658.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSRKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILRIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15529..15792
                     /gene="minE"
                     /locus_tag="AABD07_001112"
     CDS             15529..15792
                     /gene="minE"
                     /locus_tag="AABD07_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HFB2355659.1"
                     /translation="MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGQTPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15796..16716
                     /gene="oxyR"
                     /locus_tag="AABD07_001113"
     CDS             15796..16716
                     /gene="oxyR"
                     /locus_tag="AABD07_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HFB2355660.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLKEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIHD"
BASE COUNT         4661 a         3221 c         4229 g         4930 t
ORIGIN      
        1 gcctcgcctt gccgtactat ttgtactgtc tgcggcttcg tcgctttgtc ctgatttaaa
       61 tttaatccac tatattttaa acaacaaaga attgaatttg gaagaacggc atgatttgga
      121 gcgggcggtt aagatcttgc aggacacgca cgtcatcccg gtttgtcgga gaaagatgca
      181 tacgccgtga tggtcggata ccgacacttt aaaagcatcc gaccccatgc cttctgaaga
      241 ttcaaaacgc ttcagacggc atattgaaga tatttctgat atttctgttg atatttcttt
      301 gacttgtcgg atataatgtc aagcttggta catttttgcc aagtttaact ttgtctgaaa
      361 gacaggccaa tcgcagcctg tccctttact ttaaaaggaa aataatcatg actttaggtc
      421 tggttggacg caaagttggt atgacccgcg tgttcgacga gcagggtgtt tctgttccgg
      481 taaccgtttt ggatatgtct gccaaccgcg ttacacaagt aaaatccaaa gatactgacg
      541 gctataccgc cgttcaagtt acctttggtc agaaaaaagc caatcgtgtc aacaaagccg
      601 aagccggaca ctttgcaaaa gcaggtgttg aagccggtcg cggtttgatt gagtttgctt
      661 tgactgaaga aaaactggct gaattgaaag ccggtgacga aatcaccgtt tctatgtttg
      721 aagtcggtca actggtcgat gtaaccggta cctctaaagg taaaggtttc tccggcacga
      781 tcaaacgtca taacttcggt gcccaacgta cttcccacgg taactcccgt tctcaccgcg
      841 ttccaggctc tatcggtgtg gcgcaagacc cgggtcgcgt gttccccggt aagcgcatgg
      901 ccggccaata cggcaacacc aaagcaactg ttcaaaaatt ggaagttgtc cgtgttgatg
      961 cagaacgcca actgctgttg gttaagggtg ctgttccggg tgcggtcaac agcgatgttg
     1021 tagttcgtcc cagcgtgaaa gtaggtgcgt aatggaattg aaagtaattg acgctaaagg
     1081 acaagtttca ggcagcctgt ctgtttctga tgctttgttc gcccgcgaat acaatgaagc
     1141 gttggttcac cagctggtaa atgcctactt ggcaaacgcc cgctctggta accgtgctca
     1201 aaaaacccgt gccgaagtaa aacactcaac caaaaaacca tggcgtcaaa aaggtaccgg
     1261 ccgcgcccgt tccggtatga cttcttctcc gctgtggcgt aaaggcggtc gcgcgttccc
     1321 gaacaaaccc gacgaaaact tcactcaaaa agtaaaccgt aaaatgtacc gtgccggtat
     1381 ggcgactatc ctgtcccaat tggcgcgtga cgagcgtttg tttgtgattg aggcgttgac
     1441 tgccgaaact cccaaaacca aagtttttgc cgaacaagta aaaaatttgg ctctggagca
     1501 agtgctgttt gtaaccaaac ggctcgacga gaatgtttac ttggcttcac gcaacttgcc
     1561 aaacgtattg gttttggaag ctcaacaagt tgatccttac agcttgctgc gttataaaaa
     1621 agtaatcatc actaaagatg cggttgcaca attagaggag caatgggtat gaatcaacaa
     1681 cgtttgactc aagtaatctt ggcgcctgtc gtttctgaaa aaagcaacgt attggctgaa
     1741 aaatgcaacc aaatgacgtt taaagtcttg gcaaatgcaa ccaaacctga aatcaaagct
     1801 gctgtcgagc tgctgttcgg tgttcaagtt gcttctgtaa ctaccgttac cactaaaggc
     1861 aaaactaagc gttttggtcg tattttgggt cgccgcagcg atgttaaaaa agcttatgta
     1921 agcttggctg acggtcaaga gttggatttg gaagccgctg ctgcagctgc agataaggaa
     1981 taaacaaaat ggcaatcgtt aaaatgaagc cgacctctgc aggccgtcgc ggcatggttc
     2041 gcgtggtaac agaaggtttg cacaaaggtg caccttatgc acccttgctt gaaaagaaaa
     2101 attctactgc cggccgtaac aataatggtc atatcaccac ccgtcacaaa ggcggcggtc
     2161 ataaacacca ttaccgtgtt gtagacttta aacgtaacaa agacggcatt tctgctaaag
     2221 tagagcgtat cgaatacgat cctaaccgta ctgccttcat cgcactgttg tgctatgcag
     2281 acggcgagcg tcgttacatc atcgctcctc gcggtattca agccggtgtc gtattggttt
     2341 ccggtgctga agctgccatc aaagtaggca acaccctgcc gatccgcaac attcccgttg
     2401 gtacgactat ccactgtatc gaaatgaaac ccggtaaagg tgctcaaatc gcacgttctg
     2461 ccggtgcttc tgcggtattg ttggctaaag aaggtgcata cgctcaagtc cgtctgcgct
     2521 ctggcgaagt tcgtaaaatc aacgtagatt gccgtgcgac catcggtgaa gtcggtaacg
     2581 aagagcaaag tctgaaaaaa atcggtaaag ccggtgctaa ccgttggcgc ggtattcgtc
     2641 cgaccgtacg cggtgttgtc atgaatcccg tcgatcaccc gcatggtggt ggtgaaggcc
     2701 gtaccggcga agcccgcgaa ccggttagtc catggggtac tcctgctaaa ggctaccgca
     2761 ctcgtaataa caaacgcacg gataatatga ttgttcgtcg ccgttactca aataaaggtt
     2821 aattagtatg gctcgttcat tgaaaaaagg cccatatgta gacctgcatt tgctgaaaaa
     2881 agtagatgct gttcgcgcaa gcaacgacaa acgcccgatt aaaacctggt ctcgtcgttc
     2941 taccattctg cctgatttta tcggtctgac cattgccgtg cacaacggtc gcacccatgt
     3001 gcctgtgttt atcagcgaca atatggttgg tcataaatta ggcgaattct cattgacccg
     3061 tacctttaaa ggccacctgg ccgataaaaa ggctaaaaag aaataaggtg aatcatgaga
     3121 gtaaatgcac aacataaaaa tgcccgtatc tctgctcaaa aggctcgttt ggtagctgat
     3181 ttgattcgtg gtaaagacgt tgcccaagct ttgaatattt tggctttcag ccctaaaaaa
     3241 ggtgccgagc tgatcaaaaa agtattggag tcagctattg ctaatgctga gcataataac
     3301 ggtgcggaca ttgatgaact gaaagtggta actatctttg ttgacaaagg tccaagcttg
     3361 aaacgttttc aagctcgcgc caaaggtcgc ggtaaccgca tcgaaaaaca aacttgtcat
     3421 atcaatgtga cagtgggtaa ctaaggaaaa gctatgggac aaaagattaa ccctacaggc
     3481 tttcgcctgg cggtaactaa agactgggct tcaaaatggt ttgctaaaag taccgacttt
     3541 tctactgttt tgaagcagga tatcgatgtt cgcaattatt tgcgtcaaaa attggccaat
     3601 gcttcggttg gtcgagtaat tattgaacgc cctgcaaaat ctgcacgcat taccattcac
     3661 tccgctcgtc cgggtgtggt tatcggtaaa aaaggtgagg atatcgaagt tttgaaacgt
     3721 gacttgcaag tcttgatggg tgtacctatt catgtaaata ttgaagagat tcgccgtcct
     3781 gagttggatg ctcaaattat tgctgacggt atcgcccagc agttggaaaa acgcgttcaa
     3841 ttccgtcgtg ctatgaaacg agcaatgcaa aatgcaatgc gttctggtgc taaaggcatt
     3901 aagattatga cttcaggccg tctgaatggt gcggatattg cccgtagcga atggtatcgt
     3961 gaaggtcgcg tgccactgca tactttacgt gcaaatgtag attatgcaac cagcgaagcg
     4021 cacaccacat atggtgtatt gggtctgaaa gtttgggttt atacggaagg caatattaaa
     4081 tcttccaaac ctgaacatga gagtaaacaa agaaaggcag gtagacgtaa tgctgcagcc
     4141 aactagactg aaataccgta agcaacaaaa gggtcgcaat accggcatcg ctactcgcgg
     4201 taataaggta agtttcggtg agttcggctt gaaagccgta ggtcgtggtc gtttgactgc
     4261 ccgtcaaatc gaagctgctc gtcgtgcaat gacccgtcac atcaaacgtg gtggtcgtat
     4321 ttggattcgt gtattccctg acaaaccgat tactgaaaag cctattcaag ttcgtatggg
     4381 tggcggtaaa ggtaacgtgg aatattacat tgccgaaatt aaaccaggta aagtgttgta
     4441 tgaaatggat ggcgttccag aggaactggc tcgtgaagca ttcgagttgg ctgctgccaa
     4501 attgcctatt cctacaacct ttgtagtaag acaggtgggt caataatgaa agcaaatgaa
     4561 ttgaaagaca aatccgttga gcagttgaat gcagatttgt tggacttgtt gaaagctcag
     4621 tttggcttac gtatgcaaaa cgctaccggt caattaggca aaccaagtga attgaaacgt
     4681 gtacgtcgcg atattgctcg tattaaaacc gttttaactg aaaaaggtgc taagtaatga
     4741 gcgaaactaa aaatgttcgt actttgcaag gcaaagtagt aagcgacaaa atggataaaa
     4801 ccgtaacagt attggttgag cgtaaagtaa aacattcgct gtatggtaag attattcgat
     4861 tatctactaa aatccatgcc catgatgaaa ataatcaata tggaattggt gatgtggttg
     4921 ttatatcgga atcccgtcca ttgtcaaaaa ctaaatcttg ggttgtcagt gagttggttg
     4981 agaaagcacg ttctatttaa gaattaaagc aacgtgcttg gaatgggaaa cgaagtattg
     5041 cagcaaattt aatttgcgtg taaacttcgt ttcctgtctt ccagtttctt ctggaagttt
     5101 cttccctttc gggatccaag actggtttac ttgaaccgca aggtttcatt taataagcag
     5161 cggctttgct gtaagttatc tgaaagtggt aaattaagtt ggttaattta aaggtaataa
     5221 tatgattcaa atgcagacca tcttagatgt ggctgataac tctggtgcgc gtcgcgtaat
     5281 gtgtatcaag gtattgggcg gatctaagcg tcgctacgct tctgttggcg atattattaa
     5341 agtggcagtt aaagatgcgg ttccgcgtgg ccgtgtcaaa aaaggcgatg tatataatgc
     5401 ggtagttgtt cgtactgcta agggtgtgcg tcgtcctgat ggtgcgttaa ttaaattcga
     5461 taacaatgcc gccgtgttgc tgaataataa acttgaacct ttgggtactc gtatctttgg
     5521 tccggtaacc cgtgaattgc gtactgagcg atttatgaaa atcgtttcat tggcacctga
     5581 agtattataa ggaatagcac gatgaataaa atcattaaag gcgatagggt tgtagtaatt
     5641 gctggtaagg ataaaggtaa gcagggtcaa gtagttcgag tgttgggtgg taaagttgtt
     5701 gttgagggcg ttaatgttgt aaaacgccat caaaaaccta atccaatgcg tggcattaag
     5761 ggcggtatta ttactaaaga aatgcctttg gatatttcta atatcgcaat cctgaatccg
     5821 gaaactaata aagcggaccg tgttggtatt aagctgattg aaaatgaagg caaagttaaa
     5881 cgcgttcgtt tcttcaaatc aaatggctct atcattggag cataaggaga taacatggct
     5941 cggttgagag agttttataa agagacagtt gttcctgaat tggttaaaca atttggttac
     6001 aaatcagtaa tggaagtccc gcgtattgaa aaaatcacct tgaatatggg tgtgggtgag
     6061 gctgttgctg acaaaaaagt tatggaacat gctgtttccg atttagagag aattgccggt
     6121 caaagaccgg ttgttactgt tgcccgtaaa tctatcgcag gttttaaaat ccgtgataac
     6181 tatccggttg gttgcaaagt aacattgcgt cgtgatcaaa tgtttgaatt cttggatcgt
     6241 ttgattacta ttgcattacc tcgcgtacgt gacttccgtg gtgtgagcgg taaatcattt
     6301 gatggccgtg gcaattacaa tatgggtgtt cgtgagcaaa ttattttccc ggaaattgaa
     6361 tacgataaaa ttgatgcttt gcgtggtttg aatattacta ttactactac agcaaaaacc
     6421 gatgaggaag cgaaagcttt attgtcattg tttaaatttc cgttcaaagg ataatcatgg
     6481 ctaagaaagc acttattaat cgtgatctga aacgtcaagc tttggctaaa aaatatgcgg
     6541 ctaaacgcgc ggcaattaaa gcggtaatca atgattcgaa tgcaactgag gaagagcgtt
     6601 ttgaggctcg tttgaggttt caatccattc ctcgtaatgc ggcacctgtg cgtcaacgtc
     6661 gtcgttgtgc tttgacaggt cgccctcgtg gtactttccg taaatttggt ttgggtcgta
     6721 ttaaaatccg tgaaatcgcc atgcgtggcg aaattccggg tgttgttaaa gccagctggt
     6781 aataggagta attaagaatg agtatgcatg atcctatttc cgatatgttg actcgtatcc
     6841 gcaatgcgca acgtgctaat aaagcagcag ttgcaatgcc ttcttcaaaa ttaaagtgtg
     6901 ctattgcaaa ggtattgaaa gaagaaggat atattgagga cttcgcagtt tcatctgacg
     6961 taaagtctat attggaaatt caattaaaat actatgcagg tcgtcctgta attgaacaaa
     7021 tcaagcgtgt atctcgcccc ggtttgcgta tttataaagc gtctagtgag attccaagtg
     7081 ttatgaatgg cttgggtatt gctatcgtta gtacttctaa aggtgtaatg actgatcgta
     7141 aagcacgttc tcaaggtgtt ggtggtgagt tgttatgcat tgtagcctag tggaggaaaa
     7201 gaaatgtcac gtgtcgcaaa aaacccagtg acggttcccg ctggtgtaga agtaaaattt
     7261 ggaacagagg cattggttat taagggtaag aacggtgaat tgtcttttcc tttgcattct
     7321 gatgtagcca ttgaatttaa tgatggcaaa ttgacttttg ttgcgaataa tagcagtaaa
     7381 caagcaaatg caatgtctgg tactgctcgc gcattagtca gcaatatggt taaaggtgtt
     7441 tcagaaggtt ttgagaagaa attacaattg ataggcgtgg gttatcgtgc tcaagcacaa
     7501 ggtaaaatct tgaatctgtc tttgggtttt tctcatccga tcgtatatga aatgcctgaa
     7561 ggtgtctccg ttcaaactcc tagccaaaca gagattgttt taactggctc ggataaacaa
     7621 gttgttggtc aagttgcttc tgagattcgt gcgttccgtg ctcctgagcc ttataaaggt
     7681 aaaggtgttc gctatgtagg cgaagtagtg gtaatgaaag aagccaagaa aaaataattg
     7741 aggttcacta atggataaac atacaacccg actccgtcgt gcacgcaaaa cccgtgctcg
     7801 tattgcggac ttgaaaatgg taagattatg tgtgttccga agcaataatc atatttatgc
     7861 tcaagtaatt agtgctgaag gtgataaagt attggctcaa gcctctacat tggaagctga
     7921 ggtgcgcggt agtctgaaat ctggaagcaa tgttgaagca gctgcaatag ttggtaaacg
     7981 tattgctgag aaggctaaag cagcaggtgt agaaaaggtt gcttttgatc gttcaggttt
     8041 ccaatatcac ggtcgtgtga aggctttggc tgaagctgct cgtgaaaatg gtttaagctt
     8101 ctaaatattt ggagactttc agatggcaaa acatgaaatt gaagaacgcg gtgacggtct
     8161 gattgaaaag atggtcgcag ttaaccgtgt aaccaaagta gttaaaggtg gtcgcattat
     8221 ggctttctct gcgctaactg ttgttggtga tggagatggt cgtattggta tgggtaaagg
     8281 taagtcaaaa gaagtgcctg ttgcagtcca aaaggcgatg gatcaagcac gacgctctat
     8341 gattaaggta ccattaaaaa atggtacgat ccatcatgag gttattggtc gacatggtgc
     8401 tactaaagta tttatgcagc ctgctaaaga gggtagtggc gtaaaagccg gtggacctat
     8461 gcgtttggtt tttgatgcta tgggcattca taatatttcc gccaaagtgc acggatctac
     8521 taacccatat aatatcgtac gtgcaacatt agatggtttg tctaagttgc atactcctgc
     8581 tgatatcgca gccaaacgtg gcttgacagt ggaagacatt ttgggagtta accatggctg
     8641 aacaaaaaaa gattagggtt acattggtta aaagcctgat tggtacaatt gaatctcatc
     8701 gtgcatgtgc acgcggttta ggtttgtgtc gtcgcgagca tacggtagag gttttagata
     8761 cctctgaaaa ccgtggtatg attaataaaa tcagctactt gttgaaagtg gagtcttgat
     8821 atgtttttga atacaattca acctgctgtt ggtgctacgc atgctggtcg tcgtgttgga
     8881 cgcggtattg gtagtggtct tggcaaaacg ggtggtcgtg gtcataaagg tcaaaagagc
     8941 cggtctggtg ggtttcataa ggtgggtttc gagggtggtc aaatgccctt gcaacgacgc
     9001 ctccctaaaa gaggttttaa atctttaaca gtatcagcta atgcacagct tcgtttaagt
     9061 gaactggaat caattgctgt taatgagatt gatattttag tcttaaagca agcaggtctg
     9121 attgcatcta cagtctctaa tgttaaagtt attgcttctg gtgaaatttc taaggcagtt
     9181 gctttgaagg gtattaaagt taccaaaggt gcgagagctg ctatcgagga tgttggtggt
     9241 aagattgaaa tgtaaggttt aatattgtgg ctaatcaaca aacgtcatca ggttcatcca
     9301 agtttggaga tcttaagaaa cgtcttttgt ttctatttgg agcattgatt gtttttcgaa
     9361 ttggtgccca tatacccgta cctggggttg atgctgttgc tttagctaaa ttatacgaaa
     9421 gcgctggaaa cggcatcctg ggaatattga atatgttttc cggtgggtcg ttagagcgct
     9481 ttagtatatt tgcaatagga attatgccat atatttcagc ttctattatt gtacagctcg
     9541 cttctgaaat tttgccatca ttgaaggctt taaaaaaaga aggggaggct ggtagaaagg
     9601 taattacgaa atatactagg tatggtactg ttttgttagc aattcttcaa agtctaggtg
     9661 ttgcatcttt cgtatttcag caaggaattg ttgtaacaag ttcatttgag tttcatgttt
     9721 ccacggtagt ttctttggta acgggaacca tgtttcttat gtggcttggg gagcaaatta
     9781 ctgaaagggg tatcgggaac ggtatttctt taatcattac ggcaggtatt gcttcaggta
     9841 ttccttcggg tattgcaaag ctggttacac tgacgaacca aggttctatg agcatgctta
     9901 cggcgttgct tattgtattt ggtgccttat tattaattta tttggttgta tactttgaaa
     9961 gtgcacagcg gaagattcct attcattatg caaaacgcca gtttaatggt agggcgggta
    10021 gtcaaagtac gcatatgcct ttcaagttga atatggctgg tgttattccc ccaatttttg
    10081 cttccagtat tattctattt ccatctactc ttttaggttg gtttggttcg gctgatacaa
    10141 atagtgtttt gcacaaaata gctggattgt tacaacacgg tcaattgctg tatatggctt
    10201 tatttgcagc gacagttatt ttcttttgtt atttttatac ggctttggtt tttagtccta
    10261 aagaaatggc agagaattta aaaaagagtg gtgcttttgt tcctgggatt agacctggtg
    10321 agcagacctc taggtattta gaaaaagttg tattacgttt gacattgttt ggagcttttt
    10381 atattacaac tatttgttta attccagagt tcttaactac ggttttaaat gtaccttttt
    10441 atttgggtgg cacgtctttg ttgattctag ttgttgtaac gatggatttt agtacacaaa
    10501 taaattcgta taggcttact caacagtatg ataagttaat gactcgttca gaaatgaaat
    10561 cattttctcg gaaatagaat tatggcgaaa gaagatacta tccaaatgca aggtgaaatt
    10621 cttgaaactt tacctaacgc aacatttaaa gtaaaacttg agaatgacca tattgtattg
    10681 ggtcatattt ctgggaagat gcggatgcat tacattcgta tttctccggg agataaggtc
    10741 acagtagagc tgacacctta tgatttaact agggctcgaa tcgttttcag agcaagataa
    10801 accaataaaa ggaaaataaa atgcgtgtac aaccatctgt taagaaaatt tgccgaaatt
    10861 gcaagattat tcgtcgaaat cgtgtagttc gtgtgatttg tactgatccc cgtcacaaac
    10921 agcgtcaagg ttaatggaat atttctttta atgtgattct gtgatatagt gacaaaattt
    10981 gctctaaaaa ggaaaaaaca tggctcgtat tgcaggggta aatatcccta ataacgcaca
    11041 catcgtaatt ggtcttcagg ctatttacgg tattggtgct actcgtgcta aattgatttg
    11101 tgaggctgca aatattgcgc ctgatactaa agcaaaagat ttggacgaga ctcaattaga
    11161 tgctttgcgt gatcaagttg ccaagtatga agtagaaggt gatttgcgtc gtgaagtaac
    11221 tatgagtatc aaacgattga tggacatggg ctgctatcgt ggcttccgtc atcgtcgcgg
    11281 cttaccatgc cgcggtcaac gcactcgtac aaatgcgcgt actcgcaaag gtccgcgtaa
    11341 agcgattgct ggtaagaaat aaattttaag gaattttatt aatggctaaa gcaaacacag
    11401 cttcacgtgt acgtaaaaaa gtacgtaaaa ccgtgagtga gggtattgtg cacgttcatg
    11461 catctttcaa caataccatc attacaatca ctgaccgtca aggcaatgcg ttgtcttggg
    11521 ctacctctgg cggcactggt tttaaaggtt ctcgtaaaag tacaccattt gcagcacaag
    11581 ttgcagcaga agcagctggt aaagttgccc aagagtatgg cgttaaaaat ttagaggttc
    11641 gtattaaagg tccaggtcca ggtcgcgaat cctctgtacg tgctttgaat gctcttggtt
    11701 tcaagattac cagcattact gacgttaccc cgttgcctca taacggttgc cgtccgccta
    11761 aaaaacgtcg tatttaatat tggagtgatt tgaaacatgg cacgttatat tggtcctaaa
    11821 tgtaagttgg cacgtcgcga aggtacggat ttgtttttga agagtgcgcg ccgctctttg
    11881 gattctaaat gtaaaattga ttccgctccc ggtcagcatg gtgcaaaaaa accgcgtttg
    11941 tcagactatg gtttgcagtt gcgtgaaaaa caaaaaatcc gccgtattta tggcgtatta
    12001 gaacgtcagt tccgtcgtta tttcgcagaa gctgatcgcc gtaaaggttc taccggcgag
    12061 ttgctgttgc agttgctgga atctcgtttg gataatgtcg tttatcgtat gggtttcggt
    12121 tctacccgag ctgaagcaag acagcttgtt tctcataagg ctatagttgt aaatggacaa
    12181 gttgtcaata ttccttcttt ccaagtgaaa gctggtgatg ttgtctcagt tcgtgaaaaa
    12241 gccaaaaaac aggtacgtat tcaagaagca ttgggtttgg caactcaaat cggcttgccg
    12301 ggttgggttt ctgtagatgc agataaactt gagggtgtgt tcaaaaacat gccggatcgc
    12361 tctgaattga ccggtgatat taatgaacag ctggtggtag agttctactc taaataatgc
    12421 tagctcagtg agggacagtt aaatgcagaa tagcacaacc gaatttttga aacctcgtca
    12481 aattgatgta aatacttttt ctgcaactcg tgcaaaagta tctatgcagc catttgaacg
    12541 tggtttcggt cataccttag gtaatgcttt gcgccgtatc ttactgtcat ccatgaatgg
    12601 ttttgctcct actgaagtag ctattgccgg tgtattgcac gaatattcta ctgttggtgg
    12661 tgttcaggaa gatgttgttg acattttgct gaatattaaa ggtattgtgt ttaaactcca
    12721 tggtcgtagc caagttcaac ttgtgttgaa gaaatcaggt tcaggtgtcg tatctgccgg
    12781 tgatattgag ttgccgcatg atgtagaaat tctgaatcct ggtcatgtca tttgtcattt
    12841 ggctgataac ggtcaaattg aaatggaaat taaagtagag caaggtcgtg gttatcaatc
    12901 tgtttcaggt cgtcaggtag ttcgtgatga gaaccgtcag attggtgcaa tccagttgga
    12961 tgcgagcttt tcgcccatca gccgtgttag ctttgaggtt gaacctgcac gtgtagagca
    13021 gcggacggat cttgataaat tggttttgga tatcgaaacc gacggttcta ttgatcctga
    13081 ggaagctgta cgcagtgcgg cacgtatttt gattgatcag atgtctattt ttgctgattt
    13141 gcagggtact cctgtggagg aggttgaaga aaaatcacct cctatcgacc ctgttctttt
    13201 gcatccggtg gatgatctgg aattgacagt acgttcagct aattgtttga aagctgagga
    13261 tatttattat attggcgatt tgattcaacg cactgaaacc gagcttctta aaacgccgaa
    13321 tttgggacgt aaatctttga atgagattaa ggaagtattg gcatctaaag gtttgacact
    13381 gggttctaag ttggaagcat ggccacctgt aggcttggaa aagccttaat gaagaattaa
    13441 aggataattg atatgcgtca tcgtaatggc aatcgcaaat taaaccgtac cagcagtcat
    13501 cgtgctgcaa tgctgcgtaa tatggcgaat tcattattga ctcacgaaac tattgtaaca
    13561 actctgccta aggccaagga attgcgccgt gtagtagagc cgttgattac attgggtaaa
    13621 aagccgtcat tggcaagccg ccgtttggca tttgaccgta ctcgcgaccg tgatgttgta
    13681 gtaaaactgt ttggcgattt gggtcctcgt tttactgctc gtaacggtgg ttatgttcga
    13741 gtgttgaaat acggattccg taaaggtgat aatgcacctc tggcactggt tgaattggtt
    13801 gacaaaccgg ctgctgagta attttagtca tataacgcca tctgccgaaa agcaggtggc
    13861 gttatttttg caatatctga tagataatat ggtattggct attatgttta aaatattaat
    13921 tgaatagcta aggtttgcgc ggtaaactta catcattaaa aaattctatg atggtttata
    13981 taatgaatgc cttcgatata aagtcgacaa agatggacgt attgtctata tctttgcata
    14041 catcagactt gtttgatttg gaagatgtgc tggtcaaatt gggcaagaag tttcaagagt
    14101 ctggtgttgt tccatttgtt ctggatgttc aagaatttga ttatcccgag tctttggatc
    14161 ttgctgcatt ggtttcgttg ttttcaaggc atggtatgca aattttgggt ctgaagcatt
    14221 ctaatgaacg ttgggctgct gtggctatga agtatcattt gctgttttgt ctgtctcatt
    14281 cggaaaatgt taaagaactg ggtcaggttg aggtgcagaa aacggaggat ggtcagaaag
    14341 caaggaaaac agtattgatt acatcccctg tccgtaccgg tcagcaggtt tatgccgaag
    14401 atggcgattt gattgttacg ggggcggtca accagggggc ggaattgatt gcagatggca
    14461 atatgcatat ttatgcgccg atgagagggc gtgctttggc cggcgccaaa ggtgatactt
    14521 ctgcccgcat atttatccac tccatgcagg cggagttggt ttctgtcgcg gggatttacc
    14581 gtaattttga acaggatttg ccggaccatc tgcacaagca gccggtacag atattgttgc
    14641 aggataaccg attggttatc agtgcaattg gctcagagta attgtttgat attttaaaaa
    14701 ggaaatattg tggcaaaaat tattgtagta acttcaggca agggcggtgt cggtaaaacg
    14761 actaccagtg caagtattgc aacaggtttg gcattacgcg gatataaaac tgcggtaatt
    14821 gattttgatg tgggtttgcg caacctcgac ctcattatgg gttgcgagcg tcgtgtcgtt
    14881 tatgacctga tcaatgtcat tcagggtgag gcgacgctca accaggcttt gattaaagat
    14941 aaaaattgtg aaaacctgtt tattttgccg gcttcccaga ctcgggataa agacgctttg
    15001 acacgcgagg gcgtagaaaa agtgatgcag gagctgtccg gcaagaaaat gggctttgag
    15061 tatattattt gcgactctcc tgctggtatt gagcagggtg cattgatggc gttgtatttt
    15121 gctgatgaag ccattgtaac gaccaatcct gaggtttcca gtgtgcgtga ctccgacagg
    15181 attttgggca ttttgcaaag caaatcccgt aaggcggagc aaggcggttc ggttaaagaa
    15241 catctgttaa ttacgcgtta ttctcccgaa cgtgtggcaa aaggcgaaat gctgtctgta
    15301 caggatattt gcgatattct gcgtattcct ttgctgggtg tgattcccga atcccaaaac
    15361 gtcttgcagg catccaattc cggagaaccg gtcatccatc aggacagcgt agcggcttcc
    15421 gaggcatata aggacgttat tgcccgtctt ttgggcgaga accgtgaaat gcgtttcttg
    15481 gaagctgaga aaaaaagctt cttcaaacgt ctgttcggag gataaggtat gtcattgatc
    15541 gaacttttat tcggtagaaa gcagaaaacg gcaaccgttg cccgcgaccg ccttcaaatc
    15601 atcattgccc aagagcgcgc ccaagaaggt cagactccgg attacctgcc gactttacgt
    15661 aaagagttga tggaagtcct gtccaaatat gtgaatgttt cattagacaa tatccgtatt
    15721 tcccaagaaa agcaggatgg tatggatgtg cttgagttga acattacttt gccggaacag
    15781 aaaaaggtat aggacatgac cttaaccgaa ttgcggtaca tcgtcgcagt cgcccaagaa
    15841 cgtcatttcg gccgggcggc gcggcgttgt tttgtcagcc agcccacttt gtctattgcc
    15901 attaagaaat tggaagaaga gcttgccgtt tctttgtttg accggagcag caacgatatt
    15961 attacgaccg aggcggggga acgtatcgtt gcacaggcgc gtaaggtatt gaaagaggcg
    16021 gagcttatca ggcatttggc aaatgaagaa caaaacgagc tggagggtgc gttcaaactc
    16081 gggctgattt ttacggttgc gccatacctg ctgccgaaac tgattgtctc gttgcgccgt
    16141 actgcaccga aaatgccttt gatgttggaa gagaattaca cgcatacttt gaccgagtcg
    16201 ctcaaacgcg gggacgttga cgcgattatc gttgccgaac cgtttcaaga gccgggcatt
    16261 gttaccgaac ccttgtatga cgaaccgttt ttcgtgattg tcccgaaagg gcattcattt
    16321 gaggaactgg atgccgtttc gccccggatg ctgggtgagg agcaggtttt gctgctgacg
    16381 gaaggcaact gtatgcggga tcaggtactc tcaagctgtt ccgaattggc ggcgaaacag
    16441 cgcatacagg ggctgaccaa tacattgcag ggcagctcga tcaatacaat ccgccatatg
    16501 gtcgccagcg gtttggcaat cagcgtgttg ccggcaaccg cgctgaccga gaacgatcat
    16561 atgctgttca gcattattcc gtttgaaggt acgccgccaa gccggcgggt cgtattggcg
    16621 tatcgccgta attttgtccg tccgaaggcg ttgtcggcga tgaaggcggc gattatgcag
    16681 tcgcagcttc acggggtaag ttttatccac gactaggcgc agaaaatgcc gtctgaaacg
    16741 ggtttcagac ggcatttgtt atctttgccg tcaatcaggc aaacctatcc gacctacagt
    16801 tgcttcgaat cgtcattccc gcgcaggcgg gaatctaggt ctgtcggtgc ggaaacttat
    16861 cggataaaac gcttgctcca atctcgcgtt ccagattccc actttcgtgg gaatgacggg
    16921 atcaggtttc cgtatggata gattcgtcat tcccgcgcag gcgggaatct aggtctgtcg
    16981 gtgcggaaac ttatcaggta aaacggtttc tccggtcccg agtcctagat tcccactttc
    17041 g
//
LOCUS       DAWXHA010000046        16606 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.046, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000046 DAWXHA010000000
VERSION     DAWXHA010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16606
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.046"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(300..1016)
                     /gene="trmB"
                     /locus_tag="AABD07_001114"
     CDS             complement(300..1016)
                     /gene="trmB"
                     /locus_tag="AABD07_001114"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HFB2355661.1"
                     /translation="MTDTPENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGMASAEIARRLPETDFLAIDVHGPGVG
                     NLLKLINENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(1202..1378)
                     /locus_tag="AABD07_001115"
     CDS             complement(1202..1378)
                     /locus_tag="AABD07_001115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HFB2355662.1"
                     /translation="MYYFGQGTAADYNKARKWFEQATSQKNSMAFYNLACIHYSGHGA
                     RRTKKKPAATCKKP"
     gene            1636..1881
                     /locus_tag="AABD07_001116"
     CDS             1636..1881
                     /locus_tag="AABD07_001116"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355663.1"
                     /translation="MPGFFRIEGYAQTVAADVARYPQTFGMAFGGGCFGMMQGKFVVS
                     FQILALQVDVGQCGMGIGVIFLCRLLEPVNGFIGSRR"
     gene            complement(2155..2540)
                     /locus_tag="AABD07_001117"
                     /pseudo
     CDS             complement(2155..2540)
                     /locus_tag="AABD07_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235869.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
     gene            complement(2657..4543)
                     /gene="uvrC"
                     /locus_tag="AABD07_001118"
     CDS             complement(2657..4543)
                     /gene="uvrC"
                     /locus_tag="AABD07_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HFB2355664.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVRHIETTITRSEAEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKNPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYCDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIIQSDQFIDSKNPNNPNDIDLLA
                     LAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAITQRHLQQSNQ
                     QHRIDELAKILGMNSDGINRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKIQEAEANGESVKWPDVVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGELFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLGDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
     gene            complement(4598..6775)
                     /locus_tag="AABD07_001119"
     CDS             complement(4598..6775)
                     /locus_tag="AABD07_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HFB2355665.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VTFDGSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLTINIPFLIG
                     MVGMMLKGLNWTRHDWMIPPVWQFVLASIVQLWLAIPFYKSAWASIKGGLANMDVLVT
                     IGTVSIYLYSVYMLFFSSHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLG
                     LLLKLTPTQVNVQRNGEWKQLPIDQVQIGDLIRTNHGERIAADGIIESGSGWADESHL
                     TGESNPEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIAR
                     VADKAAAVFVPTVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAI
                     MVGMGKAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYYVPDSGFDED
                     ALYRIAAAVEQNAAHPLARAIVSAAQARGLEIPAAQNAQTVVGAGITAEVEGVGLVKS
                     GKAEFAELTLPKFSDGVWEIASAVTVSVNGKPIGAFALSDALKADTAEAIGRLKKHNI
                     DVYIMSGDNQSTVEYVAKQLGIAHAFGNMSPCDKAAEVQKLKAAGKTVAMVGDGINDA
                     PALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALLISQATLENIKQNLFFAFF
                     YNILGIPLAALGFLNPVIAGAAMAASSVSVLGNALRLKWVKID"
     gene            6914..7864
                     /gene="trxB"
                     /locus_tag="AABD07_001120"
     CDS             6914..7864
                     /gene="trxB"
                     /locus_tag="AABD07_001120"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HFB2355666.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFALKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSDQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            8020..8388
                     /gene="rpsF"
                     /locus_tag="AABD07_001121"
     CDS             8020..8388
                     /gene="rpsF"
                     /locus_tag="AABD07_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HFB2355667.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMITEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLAAAAEEAAAQ"
     gene            8389..8691
                     /gene="priB"
                     /locus_tag="AABD07_001122"
     CDS             8389..8691
                     /gene="priB"
                     /locus_tag="AABD07_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HFB2355668.1"
                     /translation="MGFTNLVSLAALIEKAFPIRYTPAGIPVLDIILKHESWQEENGQ
                     QCLVQLEIQARILGRQAEEWQYRQGDCATVEGFLAQKSRRSLMPMLRIQNIKEYKG"
     gene            8698..8928
                     /gene="rpsR"
                     /locus_tag="AABD07_001123"
     CDS             8698..8928
                     /gene="rpsR"
                     /locus_tag="AABD07_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HFB2355669.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            8945..9397
                     /locus_tag="AABD07_001124"
     CDS             8945..9397
                     /locus_tag="AABD07_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HFB2355670.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARARQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVIAAAE"
     gene            complement(10020..10826)
                     /locus_tag="AABD07_001125"
     CDS             complement(10020..10826)
                     /locus_tag="AABD07_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFB2355671.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTIFAMMPGMIFGVFAGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKESFGIMLLLIAGKMLYNLL"
     gene            complement(10827..11573)
                     /gene="pssA"
                     /locus_tag="AABD07_001126"
     CDS             complement(10827..11573)
                     /gene="pssA"
                     /locus_tag="AABD07_001126"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HFB2355672.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            12156..12638
                     /locus_tag="AABD07_001127"
     CDS             12156..12638
                     /locus_tag="AABD07_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HFB2355673.1"
                     /translation="MMKKILAVSALCLMTAAAQAADTYGYLAVWQNPQDANDVLQVKT
                     TKEDSAKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVSLAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGAVRSLIQHLK
                     "
     gene            complement(12685..13896)
                     /locus_tag="AABD07_001128"
     CDS             complement(12685..13896)
                     /locus_tag="AABD07_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HFB2355674.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVTGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTTSIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGIKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFVGVGLCAVLAIV
                     LNSLLPDPKES"
     gene            14118..16556
                     /locus_tag="AABD07_001129"
     CDS             14118..16556
                     /locus_tag="AABD07_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFB2355675.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTEAKKARPEHVVNLIADALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDA
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVVLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALRKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQPSLFEDNEVQQNGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPEEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEQAKAAGKPLLNPFSLNLDEPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGTFVSDGEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGIVSPSD
                     LNGSRKILAHKDHL"
BASE COUNT         3793 a         4155 c         4702 g         3956 t
ORIGIN      
        1 tagttgtttt gttaactatg cctgaatgta cacctaagtc ttcttttggt aacgatgaat
       61 aattagcaag ccgtagcctg catctccgcc aaccgcgtgc cactatctgc gggcggaata
      121 aactttaaaa ccgatgtgca ggttaaaacc tacaaggatg cgtgcggtat acacgcgttt
      181 ttgccgttca aaccattgtt tcaaaacttg tattgaaaca tcgcccgctg ctttatcttg
      241 aaagaatgcc gtctgtaagc aaacatgctt cagacggcat ttttttatcc ggcggtctgt
      301 tatccgatcc gtttgaatac caagtcccaa acgccgtgtc cgaggcgttt gccgcgcgct
      361 tcgaatttgg tttcggggcg gtagtccgga gtgggggcgt agtctgccgc cgtattttgc
      421 aggctgtcga agctgctgag gacttcaagc atctgctgtg catattcttc ccagtctgtc
      481 gccaggtgga tatagccgcc ggttttgagt ttgggcagta gtttggcgat gaagggggct
      541 tgtatcagac ggcgtttgtg gtggcgtttt ttgtgccacg ggtcggggaa gaatatgtgg
      601 atgccgtcga gcgagccgtc ttgcagcata ttttcgacaa cttctacggc atcgtgccgc
      661 atcacgcgga tgttttccaa atggttttcg ttgatgagtt tgagcaggtt gcctacgccg
      721 gggccgtgta cgtcgatggc gagaaagtcg gtttcgggca ggcggcgggc gatttctgcg
      781 cttgccattc ccataccgaa gcctatttcg aggattttag gtcggctgct tccgaaacgg
      841 gcatcaagat cggccggtgt tgcttggtag tcgatgccga agctgtccca taaggtatcg
      901 atggcgcgtt gctgtgcggc ggtcatgtgg ctttggcgga ggacgaaact gcggatgctg
      961 cgggggtgtc cggcttgacg gtcgtttggt gtttggtttt cgggggtgtc tgtcataatg
     1021 ctttcgtgcg cttgtgcaat caggatgccg tctgaatgtg aaatgactgt tcggacggcg
     1081 ggaaggaaag gggcgattat acctgtttcg tttttgcggg gtaggtgtaa cggtgttcag
     1141 acggcatttt gccactgttg cagcagttct tgcaggacgt ttttttgccc gtatccgttg
     1201 tttatggctt cttgcaggta gcggcaggct ttttctttgt ccgcctggca ccgtgtccgc
     1261 tgtaatggat gcaggcgagg ttgtagaacg ccatactgtt tttttgcgag gtggcttgtt
     1321 caaaccattt gcgggctttg ttgtagtcgg cggctgtgcc ctgtccgaag taatacatac
     1381 tgcccagatt ggtttgggct ttgctgtgtc cgagttctgc ggcttctgtg tacagtttga
     1441 gcgcggctgc gtattcgggt gcgcattgta atccgtaatg cagggcttgg gcttttgata
     1501 aagctgctct gccctttgcc gcctaatggc ggaatctttg atgccgtcat attgctcggg
     1561 atggtttaac gcgctgtcgg atatgagttt ctgataggcg gtaaggctgc cggcttcggc
     1621 tgcctgccgg taataatgcc gggctttttc cgtatcgagg gctatgccca aaccgtagcg
     1681 gcagatgtcg cccggtatcc gcaaaccttc gggatggcgt tcggcggcgg ctgcttcggc
     1741 atgatgcagg gcaagtttgt ggtttctttc cagatacttg ccttgcaggt agatgtcggc
     1801 cagtgcggca tgggcatcgg ggtcattttc ctgtgccgcc tgttggaacc ggtaaacggc
     1861 ttcatcggga gccgtaggta ggatgagttc ggcaagcggg gtgtaggcgg gaatgtatcc
     1921 ttgttgcgcg gcggcgcgca aatgattgac ggcctgtgcc gtgtcggttt tcgtcccttg
     1981 tccgaaacgg tattgcagcc cgagttgcca atgtgcttcc ggcaagcctt gtgccgccgc
     2041 tttgcggtag agcaggtgcg ccgtttcaaa atccggcggc gtgccgtgcc ggcagtattg
     2101 ggcgagcagg tattgcccgc ggggattgtt gttttttgcg cttgtttttg cccattccag
     2161 ggcttcttca aaatgtcggg acgcgtacag aaggtacatc aggcggactt gcgcttcggg
     2221 caggcctgct tctgccagag gcctgtaaag cggtatcagg gtttccgggg cgcgccttcc
     2281 aattcttgga tatatgccaa attgtaacgc gcatagggat gcccctgttc ggcggcgatg
     2341 cggagcattt ccataccttg ttcgcggtct tggtgcgggc tgtccgcgtt catcaggtgt
     2401 tttgccaact tgaatgcggc ggcgggatga tctgccgagg ccgcttctgt cagcagtcgg
     2461 cggacttcgg taaagttata atattgtttt tgagacaggc gttccaaggc ctgccgatag
     2521 ggtaagtcgg gattgttcat atcagatcgt tttccgtttt gtcgaatcat cgttattcgt
     2581 catgaagtta ggtttatatc ggtatgccgg cctgctgtat catattttta caggcggttt
     2641 ttgctttggc ggcatactaa tgcagatgat tataaatggt ttccgccaat gccttgctga
     2701 tgccttccac tttttccaag tcctcgcggc tggcggcaat cacgccgcgc agtccgccga
     2761 agcgggtaag cagggcttgg cggcgtttgc tgcctacacc gggaatgtcg ccgagagacg
     2821 aggtaacgcg tgctttgtcg cgttttttac ggtggcctgt gatggcaaag cggtgtgatt
     2881 catcgcgtac ggtttgcaat aaatgcaagg ccgggctatt aggaggcagg cggaagagtt
     2941 cgccggtaaa aggcagtatg agttcttcca tgccggcttt gcgttcgggg cctttggcaa
     3001 taccgactaa agggatgtgc agcccgagtt cttcccatac ggatacggct acgccgattt
     3061 gccctttacc gccgtcaatc aacacgacat ccggccattt gacgctttcg ccgttggctt
     3121 cggcttcctg tattttgcca taacggcgcg tcaacacttc gcgcatggcg gcgtagtcgt
     3181 cgccgggttt ggcggtggtg atgttgtagc ggcggtattg cgagggttgg atgttttgtt
     3241 cgtcgtacac gacgcaggag gcgatggtgg cttcgccttg cgtgtggctg atatcgaaac
     3301 attcaaggcg gttgattccg tctgaattca tgccgaggat tttggcaagt tcgtcgatgc
     3361 ggtgttgttg gttgctttgt tgcaggtggc gttgggtaat cgccatttgt gcgttttgtt
     3421 ccgccatttt caaccaaact ttgcgttcgc ctatggtttt ggtaacgaac tgcatctgct
     3481 tgccgtgttc tccttccaaa gcctctttca acgcatcggg aacgggaaag ttgctgatga
     3541 tgatgtcggg tttgcttttg cccagatagt gttgggcgac gaaggcttcg gcgtaatctt
     3601 gaccgtttgg ttcggggtcg tttttggtgt cgggaaagaa gcttttgtcg ccgacgtgcc
     3661 gtccgccgcg gatgctgacc cagtgtacgc agacaaggcc gtctgaaacg gcgagcgcga
     3721 gcaggtcgat atcgttgggg ttgttcgggt ttttgctgtc gatgaactgg tcgctctgta
     3781 taatgccgag tgcttggatt tggtcgcgat aacgggcggc ttcttcaaat tgcagattcg
     3841 cggcggcggt ctgcattttg tgttgcaggg tgcgggtcag ttcgtcggtt ttgccgttga
     3901 ggaaagtggc ggcttgacgc acgctgtcgc agtagtcttc ttcgctgatg tgtccgacgc
     3961 agggcgcggt gcagcgtttg atttggtaca gtaggcaagg gcggtcgcgg tgttcgaaca
     4021 cgctgtcttc gcaggtacgc agcatgaaga ctttttgcaa cacttgaatg ctgtcgcgca
     4081 cggcgttgct gttcggatac gggccgaagt attggttggg atttttcagc gtgccgcggt
     4141 aatacgccat ttgcggatat tgatggccgc tgagcatcaa ataaggatag cttttgtcgt
     4201 cgcgaaaaag gatattgtat ttcggcgaca aggctttgat gaagttgttt tcgagaatca
     4261 gggcttcggc ttcggaacgc gtgatggtgg tttcgatgtg gcgaacctgt ttcaccatca
     4321 acgcgatgcg cggcgaatgg tcgttttttt ggaaatagcc ggacacgcgc cgcttgaggt
     4381 tgaccgcttt gccgacgtat aagacgttgc cgccttcgtc aaaaaaacgg tacacgcccg
     4441 gcagcttggg caggtttttg aggaagagcg ggatgtcgaa ttgttccgga gaacggtttt
     4501 ctgtattcat atcaatcatt tgaaaaacgg cttcagacgg catatcggca gcggcagcct
     4561 tatccgttcg gaaaagctgt cgggcggtta tatgcggtca atcgattttt acccatttca
     4621 ggcgcagggc attgcccaat accgaaaccg agcttgccgc cattgccgcg cctgctatga
     4681 cgggatttaa aaagccgagc gcggcgagcg gaatgcccaa tatattgtag aagaaggcga
     4741 aaaataggtt ttgcttgatg ttttccaacg ttgcctgcga tatcagcagg gcatcggcga
     4801 gctgattgac cgaatgctgc atcagcgtgg cggaggcggt gtgttcggca acgtccgcac
     4861 cgcctttcat ggcgaagctg acgttggcgg cggcaagcgc gggcgcgtcg ttgatgccgt
     4921 cgccgaccat cgccacggtt ttgccggcgg ctttgagttt ctgcacttcg gcggctttgt
     4981 cgcacggact catattaccg aaggcgtgtg cgatgcccag ttgtttggcg acgtattcga
     5041 ccgtactttg gttatcgccg ctcataatat agacatcaat attgtgtttt ttcagacggc
     5101 ctatggcttc ggcggtatcg gctttcaacg cgtcggagag tgcgaatgcg ccgatcggtt
     5161 tgccgtttac agatacggta accgcactgg cgatttccca aacgccgtct gaaaacttcg
     5221 gcaaggtcag ttcggcaaat tcggctttgc ctgatttcac caaacccacg ccttccactt
     5281 cggcggtaat gcctgctccg acaacggttt gcgcattttg tgcagcggga atctccaaac
     5341 cgcgcgcttg tgcggcggag acgatggcgc gggcgagcgg gtgggcggcg ttttgctcga
     5401 cggcggcggc gatgcggtac aaagcgtctt cgtcaaagcc gctgtcggga acgtaataaa
     5461 cggcggcaac ctgcggcctg ccttcggtca gcgtaccggt tttgtccaat acgacggcat
     5521 cgacgtgggc tgcttcctcc attgccgccg cgtctttaaa ccaaatgccg tgtttcaccg
     5581 ctttgcccat gccgaccata atcgcggcag gggtcgccag accgagcgcg cacgggcagg
     5641 caatcaccaa aacggcaacg gcgtgcatca gtgcgaccgt ccaatcgccc ttaatcagcc
     5701 aagtaacgat aaaagtcaga agcgcgatgc ccacgacagt tggcacaaat accgccgccg
     5761 ctttatcggc cacgcgcgca atcggtgctt tactgccttg tgcttcagag agcgcgttca
     5821 tcatgtcgcc gagcagggtt tggctgccga gctgcgcggc gcggtacacc acgctgcctt
     5881 cggtcatcag cgcgcccgcc aacactttgc cgcccgcctt tttctcttcg ggattggatt
     5941 cgccggtaag gtggctttcg tccgcccaac cgctgccgct ttcgataatg ccgtcggcag
     6001 cgatgcgttc gccgtggttg gtgcggataa ggtcgccgat ttgcacttgg tcgatgggca
     6061 gttgtttcca ttcgccgttg cgttgcacgt tgacttgggt cggcgtgagt tttagcagta
     6121 agcccaagct gttcaggctg gattttttgg tgcggtgttc caaaaactta cccagcgaca
     6181 caaaaccgat caccatcacg cccgcttcaa aatacacatg cgccataccg tgcgccgcat
     6241 gcgaactgaa aaacagcata taaacggaat acaggtaaat cgacaccgtg ccgatggtaa
     6301 cgagtacgtc catattcgcc agcccgcctt taatgcttgc ccacgcgctt ttgtaaaacg
     6361 ggattgccag ccaaagttgc actatgcttg ccagtacaaa ctgccataca ggcggaatca
     6421 tccaatcgtg ccgtgtccaa ttcagccctt ttagcatcat ccctaccata ccgataagga
     6481 acgggatatt gatggtcagc aaaagccaca accgccagcc gatatggtgt tctgcttcag
     6541 gttgcggcaa tgtatcttcc gttttttcct tcgcgccgta accggttttc tcaatgattt
     6601 tggcaatgtc ggcaaccgag gttttgctgc cgtcaaacgt aacctgcgct tcctcactgg
     6661 caaagttcac tcccgccgat tcgacaaaat cttttttgtt caacactttt tcaatgcgcg
     6721 aagcacatgc ctgacaggtc atcccctcga tttggaaacg gattttttgt tgcataagtt
     6781 tgattcccgt tttgatgttc agacggcagt caaggctgcg ggatgccgtc tgaacgccgg
     6841 tatggtcaaa atttctcaaa cgcgccgata attcgggtag aatccgaaaa cttgacacag
     6901 caaaggaaaa acaatgtccc aacaccgcaa actgattatt ttgggttccg gccccgccgg
     6961 atacaccgcc gccgtctatg ccgcacgtgc caatttaaac cccgtcatta ttacaggtat
     7021 cgcgcaaggc gggcaactga tgacaacgac tgaagtggac aactggcctg ccgatgccga
     7081 cggcgtgcaa gggccggaat tgatggcgcg gtttctcgcc catgccgaac gtttcgggac
     7141 agaaatcatt tttgaccaaa tcaacgccgt cgatctgcaa aaacgcccgt tcgcactcaa
     7201 aggcgatatg ggcgagtaca cttgcgatgc cctgattgtc gctaccggcg cgtccgccaa
     7261 ataccttggt ttgccgagtg aggaagcgtt tgcagggaaa ggcgtttccg cctgcgccac
     7321 ctgcgacggt ttcttctaca aaaatcaaga tgttgccgta gtcggcggcg gcaatacggc
     7381 agttgaggag gcactctacc ttgccaatat cgccaaaacc gttacgctga ttcaccgccg
     7441 cagcgagttc cgtgctgaaa aaatcatgat tgacaaactg atgaaacgcg tggaagaggg
     7501 caaaatcatc ctcaagctgg aaagcaacct gcaagaagta ctgggcgacg atcggggcgt
     7561 aaatggcgca ttattaaaaa acaacgacgg ttctgatcaa caaattgccg tcagcggcat
     7621 ctttatcgcc atcgggcaca agccgaatac cgatattttc aaagggcagt tggaaatgga
     7681 cgaagccggc tacctgaaaa caaaaggcgg cacggcggac aatgtcggtg caaccaatat
     7741 cgaaggcgta tgggcggcgg gcgacgtaaa agaccatacc taccgtcagg caattaccag
     7801 cgcggcctcc ggctgtcagg cggctttgga cgcggaacgt tggctgggca gccaaaacat
     7861 ttgaatgccg tctgaaaccg aaattttcgg cggaatgcaa gtttttcgta ccaaatcctt
     7921 gattccgtcg gcaaacccca atataatgcc tgctctttga accttgcctt ctgctttcgc
     7981 atggcagaag gctgttttta ccatccataa ggagataaca tgcgtcatta cgagatcgtg
     8041 tttatcgttc atcctgatca aagcgagcaa gtgcccgcta tggttgaacg ttacaaaacc
     8101 atgattaccg aggcaaacgg taagattcac cgtttggaag attggggccg ccgccaactg
     8161 gcttacccga ttaacaaaat ccataaagca cattatgttt tgatgaacat cgaaaccact
     8221 cccgaagttg ttgaggagtt ggaaaccgcg ttccgtttca atgatgcggt attgcgtcat
     8281 ctgaccatca aaaccaaaca cgccgttacc gaagcatccc ctatgttggg cggcgaaaag
     8341 gctaagaacc tgttggccgc cgcggctgaa gaagcggctg cccaataatt gggattcact
     8401 aatcttgttt cgcttgccgc attgattgaa aaggctttcc ctattcgata tacgcctgcc
     8461 ggaatccctg ttttagatat tattttaaag cacgaatcgt ggcaggagga aaatgggcag
     8521 caatgccttg tccaattgga aattcaggca cgaattttag gcaggcaggc ggaagagtgg
     8581 cagtatcggc aaggcgactg cgcaacagtc gaaggttttt tagctcaaaa aagcagacgt
     8641 tccctgatgc cgatgctcag gatacaaaat attaaagaat ataaaggtta aacgacaatg
     8701 gctcgtcaat cattcaaacg tagaaaattc tgccgtttca cggctgaaaa aatccaagaa
     8761 gtcgattaca aacaagttga tttgctgaaa gactttatct ctgaaaacgg taaaatcatt
     8821 cctgcccgca tcacaggaac gaaggcattc taccaacgcc aattggctgt tgccgtaaaa
     8881 cgcgcgcgct tcttggcact cctgccttat accgaccaac acaaataatt ttggagttta
     8941 aatcatgcaa attattctgt tagaaaaaat cggcggtctg ggtaatttgg gcgacatcgt
     9001 taccgtaaaa aacggttatg cccgcaactt cttgattcct gctggtaagg caaaacgtgc
     9061 tactgaagca aacatgaaag agtttgaagc acgccgcgcc gaattggaag ccaaacaggc
     9121 cgaaattttg gcagatgccc gagcccgtca ggaaaaactg gacggtcaaa ccgttaccgt
     9181 tgcacagaaa gccggtgtgg acggccgcct gttcggttcc gttaccaatg ccgacattgc
     9241 tgccgcaatc gttgctgccg gcatcgaagc cgtgaaagca aatgtacgtc tgccgaacgg
     9301 tcctctgaaa gccgttggag agtacgaagt ggaagtggct ttacacactg atgccgttgc
     9361 taaaattact gttgccgtca ttgccgcagc cgagtaattg aaattatcag atgccgtctg
     9421 aaaccctgcc gattatcaga atgtggtttc agacggcatt tgttttgttt tccgtatatt
     9481 ctgcaaaaat cgggacggtt gttttttatt tgcctgaggt ctttgcagaa atggtttgtt
     9541 aacgaaattt gatgcataaa atgcgccaaa aaatattggc tgtgttttaa tatagtgttg
     9601 ataagcgtac ctggtttcaa tatattcaat aggataggtc tcttcccaac cgaaaaaata
     9661 attgtctttt ctcttgtaaa tagttgaaat agattgtcaa aatacatcct aaaaaattta
     9721 ataacttata tgattgcaaa ggttgcggtt tgtatgccgg tcattatggc ggaaataccg
     9781 tttgggaggc agtcgcatcg catggagtcg gcacggcagg cgatgcgccg atgccttcgg
     9841 gcgtgaaggc agggaaatcg gcagtttgga aaaaggcaat ggaatccgca ggtaggtgtc
     9901 gattgggtgg tgaaaggcaa taagtcgggc gcacgctcag actgcctatc cccttgtcgg
     9961 aacgggaggc agggcagctt tgtcctgact aattgcttgt gcaaacggta agaaggtttt
    10021 taaagcaggt tgtacagcat ttttccggca atcaaaagca acataatgcc gaaggattct
    10081 ttgagtttgg cagaagaaag tttgtgggcg gttttgacac cgagcggggc aaaggcaatg
    10141 gttgccgcgc tgaggacggc gacggcgggc aggtaaagga agcccagcga cccttcgggc
    10201 aatcctgcaa tattcagacc gttgaccaga tacgatattg cgccggagag tgcaatcggc
    10261 caggcaaggc cggatgatgt gccgatggct ttatgggcgg ggaagccgca gtggattaag
    10321 aaggggacgg aaagtgaacc gccgcctatg ccgacccagc tcgacattgc gccgaacagt
    10381 gtggaaaccg cagtcagtcc gggcagcccg ggcagcgggc gggatgccgt ctgacgaccg
    10441 gtatgcagtg ttttgaatgc gacggcggtt aaaaacagga tgaagaaaat ttgaagcccg
    10501 aacgcgggga tatattttgc ggagagtgcg ccagcgaata cgccgaatat catacccggc
    10561 atcatcgcaa atatggtttt ccagtcgacc gcctgttttt tgtgctgccc caacatactg
    10621 gaaaaggcgg tgaagaccat gacggcgaag gatgtgccga cggcgaggtg ttgcgcgtaa
    10681 ggatgttgtg ccaaaccctg caaatcaagc acccataaaa cgacagggac aatcagcgta
    10741 ccgccgccta caccgaacag gccggcaata aaacctgccg cactgcctac ggcaagcagg
    10801 attaagataa tgtcccaatg ccacatttaa tccgcctttc tgtatttttt ccaaaatcgg
    10861 cgtgccgcca taatgtagcc ggacaggctg tatccgagaa agaacaggaa aaggacgagc
    10921 gacggttccc aagtgaccag aagcagcagt aagacggcaa gcagcattcc gacaaagggg
    10981 acttgtctgc ggatgttgat ttctttaaaa ctccaaaaag ggatttggac aatcatcgac
    11041 aggccggcaa acagtgtgat gcctaatgcc caccagtgga cggcggggaa tttttcgacg
    11101 ctgtggttga cccaaatcag cccgacaatc agcgcggcgg cagtcggact gggtacgccg
    11161 ataaaccagc gtttgtccac cttgccgatg agcgtgttga acagcgcgag gcgtagggcg
    11221 gcgcaggcgc agtagatgaa ggcgacggaa taaccgattt tgccgaactg ccaaagctgc
    11281 catttgtagg caataagcgc gggggcaacg ccgaagctga ccatgtcggc aaggctgtcg
    11341 agctgctccc cgaacgcgct ttggctgttg gtcagccgcg ccacgcgccc gtccataccg
    11401 tccagcaaca tagagatgaa taccgcgatg gcggcggttt cataacgtcc gtgcatggat
    11461 tgggtgattg cgtaaaatgc ggaaaacagc gcggcgatgg taaaggagtt gggcagcagg
    11521 tagatactgt tttgacgcag ggagcgttgc ggggtgttgg tcggggtttc catagctgaa
    11581 gtgtctcacg gacgtggaga atcgataggg gattataacc caaaccatta tcgaacaata
    11641 cgccctttag gatgaagccc tcggaggcgg tttgtttttc tgatggcgga tgctttgcgg
    11701 ggcggtttga ctctgcctgc caccgggtgt gttgtttcgg attttgccgg atggatattg
    11761 ttgccgggca tttctgcgct tgccggaagg tatcggaggg agggcatcgg aatatgcggc
    11821 gcgccgttca aaccggggcg gtatttccct attttttggg gggtgcaggt ttcaacaaat
    11881 tgaaagatat tttttgcatt tccgaccgta tgctgatttt gaagcgggat aaattatagg
    11941 acaaggtttt tcgcccgccg caaaggttgc ccgcaatgcc gtctgaaaac aacggcttgc
    12001 cgctaaggcg gcaatatgag gatttgcgct gccgaaaccg gtttgctaca acccggcagt
    12061 gaaatctgca gggagggata ggccgataag gcgggactta tcttgttttt tgtttataat
    12121 gcaacagaat ttggaggaat cgtcgggaat ttatcatgat gaaaaagata ctggcagtat
    12181 cggcactatg cctgatgact gcggcggcac aggctgccga tacttacggc tatctcgccg
    12241 tttggcagaa tccgcaggat gcaaacgatg ttttgcaggt taaaaccaca aaagaagatt
    12301 cggcgaaaag cgaagcgttt gccgagttgg aagccttttg caaaggtcag gacacgcttg
    12361 cgggcattgc cgaagacgag ccgaccggat gccggtcggt cgtgtcgctg aacaatacct
    12421 gtgtctcgct ggcatacccg aaagccttgg gcgcgatgcg cgttgaaaac gccgtcgtga
    12481 ttacttctcc gcgttttacg agcgttcatc aggtcgcact caaccagtgc ataaaaaaat
    12541 acggcgcaca gggacaatgc ggcttggaaa cagtgtattg cacgtcatct tcttattacg
    12601 gcggggctgt tcgctcctta atccaacacc tgaaataaaa aatgccgtct gaaggatgtt
    12661 cggacggcat ttccatatcg acggtcagga ttctttcgga tcgggcagca ggctgttcaa
    12721 cacaatggcg agtacggcgc acaagcccac gccgacaaag ctgaagctgc ccaatttgag
    12781 tgtcataccg ccgatgcccg tggtcagtac cgagctgacg atgaccaggt ttttcggcag
    12841 catcaaatcg actttggcat caatcagggt tttgatgcct aaagaagcaa tcgtgccgaa
    12901 cagcagcagc ataatgccgc ccatcacggg catcggaatg gaagccaaaa acgcattgaa
    12961 tttgccgaaa aacgccatgc agacggcaaa aaccgccgcc caagtcatga tgacggggtt
    13021 gctgtttttg gtaatcatca ccgcacccgt tacttcgccg taggttgtaa ccggcgggcc
    13081 gccgatcaga cctgcaacgc acacgcccaa gccgtcgccc gcaagggttt tgtccaagcc
    13141 cgggtctttt gtgtagtctt ttcccgttac attgccgatt gccatgatgc cgccgatgtg
    13201 ttcgatggcg ggggcgacgg caacgggcag cataaacagt gccgcctgcc agttgacctg
    13261 aggcgtttca aaatggggaa cggcgaacca gggcgcgtgt gcaatgcttg tcgtgtccac
    13321 cagtcccatc agcagtgcca aaacataacc cgaagcgaca ccgatcaaga tgggaatcag
    13381 cttcatcatc ctgctgccga aaaccgatac gatggcggta acggcaaagg taaagccgga
    13441 aagaatcagc gaatcggtat agtcgatgac ctgtttgccg tcagcctgac ccattgccat
    13501 gctgcttgcc gccacggcaa cagacagacc gatgaccatg atgacagggc cggtgacgac
    13561 cggcggcagc agtttgtgta ccgccgccag tccgcgccaa cggatcagcg cggcaaacac
    13621 aaaatacata aagccggcgg caaacagccc gaacatggtg gaaggcagcc cccattcgcc
    13681 gacggagtag ataatcggcg cgataaaggc aaacgaagaa ccgagaaaaa tcggtacttt
    13741 gcgtttggtt gtgatttgga acagcagcgt tcccaagcct gcgcccaaaa gcgcaagagc
    13801 cggattcaga ccggtcagca ggggaaccag caccattgcg ccgaatgcca caaataaaat
    13861 ctgcgcgccg gaaacggcaa gtttcagttg gttcatacca tcttctttca atcggttcaa
    13921 acggcacgga ttatactggt ttgccgaggg gctgcgtaaa aatacatacg tcgggcaaag
    13981 atatgccgtc tgaaaggcaa cgtctgtctg ttgcaggatg aaagcgggag aaatggagta
    14041 taatccgaca ctttccatat tcaatccgca agccgtcccg aacccttatt tcagacggca
    14101 ttttccggta atacggcatg acagaaaaat cccataaaaa aacagcaaaa ggcagggcgg
    14161 gaagcccgtc cccaacgtcc gcacgcaaca agaaagccga caacggcgcg cggggcaata
    14221 aagtttccga gcggctcaag gcggtcaaag agctgcagaa aactgaagcc aaaaaggcgc
    14281 gtcccgaaca tgtcgtcaac ctgattgccg acgcgctgtg gctgatgggt ttggcggcaa
    14341 ccctgtattt ggcgatttcc ctgatcagtt tcgatatggg cgatccgtct tggtcgcaca
    14401 gttcaccggt tgtggaagat gccgccaatt ggggcggact gttcggcgcg tatgttgccg
    14461 atgtcggcta ttatcttttc ggctggtcgt tctggtggtg gatagcggct gcctgcgtcg
    14521 tgctgtataa aaatttccgt ctgcacgcaa aacagacgga aaacgaggca tacaaccaca
    14581 aaatcgctgc cgccgcgctg tttgtcctga cggtcttcag ccccgtcttg gagtattttg
    14641 tgctgggcgg aaaatatgcc gactccctgc ctgtcggagc aggcggtatg gtcggcatac
    14701 gtgtcggcgc agtgtttgcg tggctgttgg ggaaatcggg cagcctgctg attatcctgg
    14761 ttgttctgct gttgtcgttg tccctgctgg tgcagatttc atggctggaa tttttgaacg
    14821 gtgcgggcag ggcggttcaa aaccgcctga gtgccttatc cggcaaggtc atggctttga
    14881 gaaaacgccg gccgaatacc aaaacagacg gtgtcgatac ccaaaataca cggcgcatgg
    14941 tgaaagaagc caaaaacatc actgccaaac ccgttgcctt gcccgaaggc agcagcagca
    15001 accgcaaatc cgtcgcggtt tccgttgcgc cgccgcctaa aatccaacct tcgctgtttg
    15061 aagacaatga agtacagcag aacggcgaat accacaagcc tacattgaac ctattgcgga
    15121 ttcccgacag cgagccggtc agcatcaatc ccgccgaatt ggagcgcact gccgaactaa
    15181 tcgaatccaa actggcagaa ttcggcatcg gcgtacaagt cgtatccgcg acatccggcc
    15241 ccgtcatcac gcgctacgaa atcgaacccg cgcaaggtgt caaaggcagc caaattgttg
    15301 ccctgtcgaa agatttggca cgctctatgt cgctgcaatc cgtgcgtatc gtcgaaacca
    15361 ttgcgggcaa aaacacgatg ggcatcgagt tgcccaacga caaacgccaa gacgtgatgt
    15421 tgagcgaaat cttgtcctcg cccgtgtttg ccgaagccaa atccaagctg accgtcgcgc
    15481 tgggcaaaga catcgccggt acgcccgtcg tcggcgactt ggcgaaaatg ccgcaccttt
    15541 tggtcgccgg catgaccggt tcgggcaaat ccgtcggcgt gaacggcatg attatgtcta
    15601 tgcttttcaa agctacgccc gaagaagtcc gcttcattat gatagacccg aaaatgctcg
    15661 agttgagcat ttacgacggc attccgcacc tactctgtcc cgtcgttacc gatatgcgcg
    15721 aagcagggca ggcgttgaac tggtgcgtcg ccgaaatgga aaaacgctac cgcctgctct
    15781 cccacgccgg tgtacgcaat ctggaaggct tcaaccaaaa agtcgaacaa gccaaagcgg
    15841 caggcaagcc gctgctcaat ccgttcagcc tgaacctcga cgaacctgag ccactggaaa
    15901 aactgccgat gatcgtggtc gttatcgacg aacttgccga cctgatgatg accgaacgca
    15961 aagctgtcga gcagcaaatc gcccgcctcg cccaaaaagc gcgcgccgcc ggcatacaca
    16021 tgattgtcgc cacccaacgc ccaagcgtcg atgtcgtaac cggtctgatt aaagccaaca
    16081 tcccgacgcg tatggcgttt accgtgcaaa gcaaaatcga cagccgtacc atcctcgacc
    16141 aaatgggcgc ggacgaactg ctcaaatatg gcgattcgct gttcctgcaa ccgggcagtg
    16201 ccgaaccgac ccgcctgcaa ggcacgtttg tttcagacgg cgaagtgcat caagtcgtca
    16261 actacgtcaa atcgcaagcc ccagccgact atattgaagg tctgctcagc ggcgaagccg
    16321 cgctggaaac tgccaatatc gttaatccga atgcagacag cgacgaatta ttcgatcagg
    16381 cagtcgccta tgttttggaa agcaaaaaaa cctccatttc gtctttgcag cggcagttgc
    16441 gtatcggcta taaccgcgcg gcaaacctga tggaggcact ggaaaatgcg ggtatcgttt
    16501 ctccctccga cctcaacggc agccgtaaaa ttttggcgca caaggaccat ttatagcccg
    16561 tatcgcaaaa tgccgtctga acggcggaat tggcgtttca gacggc
//
LOCUS       DAWXHA010000047        16573 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.047, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000047 DAWXHA010000000
VERSION     DAWXHA010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16573
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.047"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(220..1149)
                     /locus_tag="AABD07_001130"
     CDS             complement(220..1149)
                     /locus_tag="AABD07_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFB2355676.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAERDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQSSIS
                     FHPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1278..2027
                     /locus_tag="AABD07_001131"
     CDS             1278..2027
                     /locus_tag="AABD07_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HFB2355677.1"
                     /translation="MVLRRDFLAWCDETLQTASFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     VHPILGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVAI
                     GKPEREIRRVAWCTGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            2150..2731
                     /gene="petA"
                     /locus_tag="AABD07_001132"
     CDS             2150..2731
                     /gene="petA"
                     /locus_tag="AABD07_001132"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HFB2355678.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2750..4099
                     /locus_tag="AABD07_001133"
     CDS             2750..4099
                     /locus_tag="AABD07_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HFB2355679.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            4099..4902
                     /locus_tag="AABD07_001134"
     CDS             4099..4902
                     /locus_tag="AABD07_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HFB2355680.1"
                     /translation="MRAVEMKQAMKNWFAALLSAVPMSAAFASGGHAHYEKVDIDLRD
                     QVSLQRGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAM
                     NPKDAAKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHP
                     LWEQQGVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYV
                     RDLVNYLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5234..7024
                     /gene="rmuC"
                     /locus_tag="AABD07_001135"
     CDS             5234..7024
                     /gene="rmuC"
                     /locus_tag="AABD07_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HFB2355681.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFAGLNAQLAEKAA
                     RCDFIEQAHAEIASELAALDGKYEHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIDLQEKAQGLAVENERLATQLGQERKAFAEQYALERQIRQRVETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAYLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVRQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADEAARELAAYIASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKAGKQ
                     LQRDLVERANEQTAFALGKPSEQEAADEAE"
     gene            complement(7091..7723)
                     /locus_tag="AABD07_001136"
     CDS             complement(7091..7723)
                     /locus_tag="AABD07_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HFB2355682.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTRNVPVLGPHREDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFAFPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7815..8639
                     /locus_tag="AABD07_001137"
     CDS             7815..8639
                     /locus_tag="AABD07_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HFB2355683.1"
                     /translation="MIKKIIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRRHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGIGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            8708..9271
                     /locus_tag="AABD07_001138"
     CDS             8708..9271
                     /locus_tag="AABD07_001138"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HFB2355684.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGD
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKEKPVKADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALGGK"
     gene            9355..9792
                     /locus_tag="AABD07_001139"
     CDS             9355..9792
                     /locus_tag="AABD07_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HFB2355685.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEGQD
                     DIINNAISALQEFPENHGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMIKAV
                     QYSPAAEDFAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            10013..10282
                     /locus_tag="AABD07_001140"
     CDS             10013..10282
                     /locus_tag="AABD07_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HFB2355686.1"
                     /translation="MLKQSIEIINKLGLHARASSKFTQTASQFKSEVWVTKNGSRVNG
                     KSIMGLMMLAAAKGTVIELETDGLDEAAAMKALTDLINDYFGEGE"
     gene            10282..12057
                     /gene="ptsP"
                     /locus_tag="AABD07_001141"
     CDS             10282..12057
                     /gene="ptsP"
                     /locus_tag="AABD07_001141"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HFB2355687.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAQADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIISPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGEVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPSVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNAGQLEGDIAKVIRCEDE
                     EKSEKLIKQINSVSVAEEAEVKGRK"
     gene            complement(12184..13125)
                     /locus_tag="AABD07_001142"
     CDS             complement(12184..13125)
                     /locus_tag="AABD07_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFB2355688.1"
                     /translation="MLELNGLCKCFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIRLNGENITCMPPEKRRISLMFQDYALFPHMSALENTAFGLKMQK
                     MPKAEAERLALSALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LIQTPAGVQVARLMGLPNTDDDRHIPQNAVCLDNHGTECRLLSLVRLPDSLRLSAVHP
                     EHGELTLNLTVGQHTDGISGNGTVRIRVDEGRIVRFR"
     gene            complement(13134..14009)
                     /locus_tag="AABD07_001143"
     CDS             complement(13134..14009)
                     /locus_tag="AABD07_001143"
                     /inference="COORDINATES: protein motif:HMM:NF012514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFB2355689.1"
                     /translation="MPTVRFTESVSKQDLDALFERAKASYGAESCWKTLYLNRLPLGN
                     LSPEWAERIKKDWEAGCSESSDGIFLNADGWPDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLVESNGRWHFWIGRRSPHKAVDPGK
                     LDNIAGGGVSGGEMPSEAVCRESSEEAGLDKTLFPLIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVAGFEKMDIGGLLDAMLSKNMMHDAQLVTLDAFYRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(14192..14268)
                     /locus_tag="AABD07_001144"
     tRNA            complement(14192..14268)
                     /locus_tag="AABD07_001144"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14232..14234),aa:Met,seq:cat)
     regulatory      14417..14516
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            14607..16508
                     /gene="thiC"
                     /locus_tag="AABD07_001145"
     CDS             14607..16508
                     /gene="thiC"
                     /locus_tag="AABD07_001145"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HFB2355690.1"
                     /translation="MTTPKKTAKTSGNEARELSDLSEDIGIRFKYQNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGAYGDPAAHIDLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGIECAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFAAIRERMKLDELFRRPEYAKLLKQHTGQSFGANIPTRPDQITPEFVRQEIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQTLEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         3971 a         4357 c         4614 g         3631 t
ORIGIN      
        1 gttataagga tatttcgtta atctcattat tttgctccat gtctaaaacg tcctgttgat
       61 ccatatattt cacccgttat gagtctgttc ccatctcata tagtttcaag tttaacaacc
      121 ccttgaggct atgttaaaag agtttttcta ataactattc cgttttctta aatataaaaa
      181 aatagaaaaa tagcccgggt atagtttgaa caagggaaat cagaccggtt ccaactcact
      241 taatccgggc aagtccgcga agccgcgttc acgtatgatt tggcaaaagt tgttcagata
      301 acttttatct gtgtcttcag tgcggatggc ggcatacagt ttgctttgca gtccgtcggc
      361 agtaatttgg cggtggacga catagccttt ttcaaggtag ggcatgactg tccaataggg
      421 aagggcggca atgccacgtc tgctggcaac cagttggata atggcgatgg tcagctcgct
      481 gtgccggcgc ggcgggttga tgtttttcgg aatcaggatt ttcttgggca aatccagcat
      541 ttcatcggga acgggatagg taatcagggt ttccccgata aagtcttccg ccgtccaaac
      601 gtttttggcg gcaagcggat ggtccggggc gcaaatgccg accatttcgt aggcaaacag
      661 tgggtggaag ctgatgctgc tttgtttttc ggcttcggag acaatggcga ggtcggcgcg
      721 gtgttgcagc agcagcccga cgggatccgc ttggaatcct gatacgatat ccagttcgac
      781 ttggggccac atcgggcgga attcgcccat ggcgggcatc agccagtcga aacaggtatg
      841 gcattcgacg gcaatccgca gctctcccgc ctccccttcc gtgattcgcg ccaaatctcg
      901 ttctgcaaca gcaacttgag gtatcagttc gtgggcgagg cgcagcagcc tttcgcccac
      961 cggggtaaag cgcaggggcg tggatttgcg ttcgaacagc ggcgtgccgt agtggttttc
     1021 gagcatacgg atctggtggg aaagggcgga ttgggtaagg aaaacccgtt tggctgcaag
     1081 ggagacgctg ccggtttctt caagtgccag cagggttttg aggtggcgca attcgataat
     1141 ggaatccatg gggcttcaga cggcatattg aaccggcgca tattaaaata attcatatgc
     1201 gggtgcaaat cggaaaaatg ggcgtttcgg gcatttgcgg ttagaatgcc cgcttgtttg
     1261 gaaatgacag gaaaaatatg gttttgcgca gagatttttt agcctggtgc gacgaaacgt
     1321 tgcagacggc atcgtttaaa gattacgccc ccaatggttt gcaggttgaa gggagggaat
     1381 atatcgggaa aatcgttacg tcggtaacgg caagcagggc agcgattgat tttgctgtgg
     1441 agcagaaggc agatttgctt ttggtacatc acggtatgtt ctggaaaaac gagttgccga
     1501 ccgttaccgg ttggaaaaaa gaacggattg ccgcactgtt acggcacgac atcaatatgg
     1561 caggctacca tctgcccctg gatgtgcatc ccatactggg caacaatgcc caactcgccg
     1621 acagattggg ttttgcgaca gaaaaacggt tcggcgaaca aaacctgctc aactcgggca
     1681 gcctgaaaca agccaagaca ctcggcgcat tggcggcgca tattgaaaca gttttgcaac
     1741 gtaagcctgt cgccatcggc aaacccgaac gcgaaatccg acgggtcgca tggtgtaccg
     1801 gcggtgcaca gggctttttt cagacggcaa tagatgaagg cgtcgatctg tatctgacgg
     1861 gtgaaatttc cgaagcccaa taccacctcg ccaatgaaac gggtacggct ttcatttcgg
     1921 cagggcatca cgcgacggaa cgttacggcg tacgcgcgct ggcagaatcg gcggcagagg
     1981 ttttcgggtt ggaagtgtgc cattttgacg aaaacaaccc ggcttgagtc ttgagaaata
     2041 tcataaaact ttaccttatt ttaaataatg ctttgagtat cactgcaaac tgggtaaaat
     2101 tgcaatgttt aatggctcgg cattcccaaa atattaggac gactgaataa tggataatca
     2161 agaaatcaac aacggccgcc gccgtttcct gacacttgcg acctgcggcg cgggcggagt
     2221 ggcagcattg ggtgtggcaa cgccgtttgt ggccagtttt ttcccttcgg aaaaagccaa
     2281 ggccgccggt gctgccgtcg aagtggatgt cagtaaaatc gaagcgggtc agctgctgac
     2341 cgccgagtgg caaggcaaac cgatttgggt gctcaaccgt acagatcagc agcttaaaga
     2401 cctgaaaggc ctgaacggcg aacttaccga tcccaattcc gatgcggaac agcagccgga
     2461 gtatgctaaa aacgagaccc gttcgattaa gccgaacatc cttgtcgcca tcggtatctg
     2521 cacccatttg ggctgctcgc ccaccttccg tcccgacatt gcccccgccg atttgggcgc
     2581 agactggaag ggcggcttct tctgcccgtg ccacggttcg aaattcgact tggccggccg
     2641 cgtatataaa ggtgttcctg ccccgaccaa cctggttgtc ccgccatata aatacttgag
     2701 cgacacaact atcttggtgg gcgaagacta agaataagga acgataatta tggcaaacca
     2761 aaccaatagc aaagcaaaag cattgttagg ctggatggac gctcgcttcc ccctgtctaa
     2821 aatgtggaat gagcatttgg cgcaatacta tgcgccgaaa aactttaatt tttggtacta
     2881 tttcggctct ttagccctgc tcgtcctcgt gattcaaatc gtcagcggta ttttcctgac
     2941 gatgaactac aaaccggacg gcaacctgaa tgcctaccat ctgcctgctg cctttaccgc
     3001 agtagagtac atcatgcgcg acgtgtccgg cggttggatt atccgctaca tgcattccac
     3061 cggcgcatct ttcttcttca ttgttgttta tctgcacatg ttccgtggtt tgatttacgg
     3121 ttcgtacaaa aaaccccgtg agttggtgtg gattttcggt tctctgattt tcttggcatt
     3181 gatggcggaa gcctttatgg gctacctgct gccttggggt cagatgtcct tttggggtgc
     3241 gcaggtgatt atcaacctgt tctccgccat tcccgtcatc ggtcctgatt tgtccacttg
     3301 gattcgcggc gacttcaacg tttccgacgt taccctgaac cgcttcttcg ccctgcacgt
     3361 tatcgccgta ccgctggtat tgctcggttt agtcgtggca cacatcatcg cactgcacga
     3421 agtgggctct aacaaccccg acggtgtgga aatcaagaaa aacaaagatg aaaacggcat
     3481 tccgcgcgac ggcatcccgt tccaccctta ctacactgtt aaagacatcc tgggcgtcgt
     3541 tgtattcctg attgtcttct gtgccgtatt gttctttgcc cctgaaggcg gcggctactt
     3601 cctggaagcg ccgaacttcg atgcggcaaa tgcgctgaaa acacccccgc acattgcgcc
     3661 ggtatggtat ttcacaccgt tctacgccat tttgcgtgcg attccttcct tcttgggaac
     3721 gcaggtttgg ggtgtaatcg gtatgggcgc ggcggtcgtg ttgattgccc tgctgccttg
     3781 gctggacagg ggcgaggtga aatccgtccg ttaccgcggt ccgattttca aaaccgcatt
     3841 ggtcttgttc atcatttcct ttatcggttt gggtattttg ggcgcgatgg tggcaaccga
     3901 tacgcgtact ttggtcgcgc gcatcctgtc cttcgtctat ttcgcattct tcctgggtat
     3961 gccgttctat accaagctgg ataaaaacaa accggttccc gaacgcgtaa ccatgagcac
     4021 cgccaaacaa aaaatcatgt tctttgttta cgtcggcatt actgccgtgg gtgcttacct
     4081 gtttgcaacc aacatctgat gagggcagtc gaaatgaaac aagctatgaa gaattggttt
     4141 gctgccttgc tgtcggcagt acccatgagt gcggcatttg cttcgggcgg tcatgcacac
     4201 tatgagaaag tcgatattga tttgcgcgac caagtaagct tgcagcgcgg cgcacaaatc
     4261 tttaccaact actgtttgtc ctgccactcg gcaagcggta tgcgtttcaa ccgtttgaaa
     4321 gacatcggtc tgactgatga agaaatcaag aaaaacctga tgtttaccac cgataatgtc
     4381 ggcgatgtca tgcattcggc gatgaacccg aaagatgcgg caaaatggtt tggtgctgct
     4441 ccgcccgatt tgacattgat tgcgcgttcc aaaggtgcag actaccttta cgcttatatg
     4501 cgcggcttct ataaagatcc gacccgtccg agcggctgga acaatactgt attcgataaa
     4561 gtcggtatgc cccacccgtt gtgggaacag caaggcgttc aagccgttga gttggatgcc
     4621 aaaggtcagc cggttatggt aaaagacgaa cacggcgaga tgaagcctaa gctgtattgg
     4681 gaatctaccg gtttgcacag ccgccgtctg cctaacggca aagtgatcca gaaagagtac
     4741 gacgcatatg tacgcgattt ggtcaattac cttgtgtaca tgggcgaacc tgcacaactg
     4801 caacgcaaac gtataggcta tgtcgtgatg attttcctat ttgcggttat gctgcctttg
     4861 gcgtatttcc tgaaaaaaga atattggaaa gacgtacact aagcgtttgg aacaaaaggg
     4921 caaatccttt agggtttgcc cttttttcat tttgcctgcc gtttgaaaag cctgaatccg
     4981 tatgccgtct gaacatagct gcaacatttc agacggcatc attctaaaaa tgtcaggcat
     5041 cgggaactta atcagggttt gtggcagatt gatattgaat taggaaaagg tctgaaaccg
     5101 caagcagcat ggtaaggcga tgtcgaacag gtttaaagcc aatccgctat attttttgga
     5161 gctgcaccgt gcaaacaggt agaatggcgg cggttttgtc cggtgtgaaa atgtttgaat
     5221 attaggatga ttgatggagc tgatgactgt tttgctgcct ttggcggcgt tggtgtcggg
     5281 cgtgttgttt acatggttgc tgatgaaggg caggtttcag ggcgagtttg ccggtttgaa
     5341 cgcgcaattg gcggaaaagg cggcaagatg tgattttatt gaacaggcac acgcagaaat
     5401 tgcatcagaa ttggccgctt tggatgggaa atacgagcat ttgcaggacg aaaattatgc
     5461 tttgggcaac cgtttttccg cagccgaaaa gcagattgcc catttgcagg aaaaagaggc
     5521 ggaatcggtt cggttgaagc agtcgtatat cgatttgcag gaaaaggcgc agggtttggc
     5581 ggttgaaaac gaacgtttgg caacgcagct cgggcaggaa cggaaggcgt ttgccgagca
     5641 atatgcgctg gaacgccaaa tccgccaaag agtcgaaacc gatttggaag aaagccgcca
     5701 aactgtccgc gacgtgcaaa acgacctttc cgatgtgggc aaccgttttg ccgccgccga
     5761 aaaacagatt gcctatttgc aggaaaaaga ggcggaagcg gagcggttga ggcagtcgca
     5821 taccgagttg caggaaaagg cgcagggttt ggcggttgaa aacgaacgtt tggcaacgca
     5881 aatcgaacag gaacgccttg cttctgaaga aaagctgtcc ttgctgggcg aggcgcgcaa
     5941 aagcttgagc gatcagtttc aaaatcttgc caacacgatt ttggaagaaa aaagccgccg
     6001 ttttaccgag cagaaccgcg agcagctcca tcaggttttg aacccgttga acgaacgcat
     6061 ccacggtttc ggcgagttgg tcaggcaaac ttatgataaa gaatcgcgcg agcggctgac
     6121 tttggaaaac gaattgaaac ggctccaagg gttgaatgcg cagctgcaca gcgaggcaaa
     6181 ggccctgacc aacgcgctga ccggcacgca gaacaaggtt cagggcaatt ggggcgagat
     6241 gattctggaa acggttttgg aaaattccgg ccttcagaaa gggcgggaat atgtggttca
     6301 ggcggcatcc gtccgaaaag aggaagacgg cggcacgcgc cgcctccagc ccgacgtttt
     6361 ggtcaacctg cccgacaaca agcagattgt cattgattcc aaggtttcgc tgacggctta
     6421 tgtgcgctac acgcaggcgg cggatgcgga tgaggcggca cgcgaactgg cggcgtatat
     6481 cgccagcata cgcgcgcata tgaaaggctt gtcgctgaag gattacaccg atttggaagg
     6541 tgtgaacaca ttggatttcg tctttatgtt tatccctgtc gaaccggcct acctgctggc
     6601 gttgcagaat gacgcgggct tgttccaaga gtgtttcgac aaacggatta tgctggtcgg
     6661 ccccagtacg ctgctggcga ctttgcggac ggtggcgaat atttggcgca acgagcagca
     6721 aaaccaaaac gcgctggcga ttgcggacga aggcggcaag ctgtacgaca agtttgtcgg
     6781 cttcgtacag acgctcgaaa gcgtcggcaa aggcatcgat caggcgcaaa acagctttca
     6841 gacggcattc aagcaacttg ccgagggacg cgggaatctg gtcggacgcg ccgagaaact
     6901 gcgtctgttg ggcgtgaagg caggcaaaca gcttcaacgg gatttggtcg agcgtgccaa
     6961 cgaacagacg gcatttgctt tgggcaaacc ttcggaacag gaagcggctg acgaagccga
     7021 ataggaaagg cggatgcgtt tcagacggca tcagtgcaga tgatgccgtc tgaagacttt
     7081 gggaagtcgg ttagaaaaac ggattgtgcc gtttttcgtg tccgatggaa gtcatacgcc
     7141 cgtgtccggc gacaacttgc acggtttcgg ggaaggcgaa taatttgttg cggatattgt
     7201 tgattaagtc ggcgtggttg ccgcgcggaa aatcggtcct gcctatggtt tcgtaaaaca
     7261 gcacgtcgcc cgcaatcagc agctccgctt cggcacaata gaaaaccacg tgtccgggcg
     7321 tgtgccccgg aatatgcagc acttgaaagg catagcgtcc gaccgtgagc gtttcgcctt
     7381 cttcgagcca acggttcggc gcaaaggcgg gcgagacggg aaatccgtat tgcgcggtgg
     7441 tttgcggcag cgattggagc aggaattcat cttcgcggtg cggtccgagg acgggaacgt
     7501 tacgcgtttt caacatttcg accacgccgc ccgcgtgatc gagatggccg tgcgtcagcc
     7561 agattgccgt gagcgtaagt ttgcggtttg ccaacgcttg cagcaggaac ggcacgtcgc
     7621 cgccgacatc ggtcaggacg gcttcgccgc tttcgtcgtc ccaaatcagg gtgcagtttt
     7681 ggcggaaggg ggtaacgggg aagatttcgt aacgtagggt catcggcgtg ttcctaaacg
     7741 gtttttcaga cggcatcggg tttgccgttt gttttatggc ggtttgccgc ctgttttgat
     7801 attgggggaa tcaggtgatt aagaagataa tcggcggcat cataccgatt tttacggcgg
     7861 ttttcatccc tgcatcggca ggcgcggcgg atttgatgct ggcgcaggaa tacaaagggc
     7921 aggacattgc cggctgggcg atgagcgaga agctcgacgg cgtgcgcgcc tattgggacg
     7981 gaaagcacct gataagccgt cagggctacg cgtttacgcc ccccaaaggc tttaccgcgc
     8041 agtttccgcc ttatcctttg gacggcgaat tgtatagcgg gcgcggtcag ttcgagcaga
     8101 tttccgctac cgtgcgttct gtttcttcag actggcgcgg catccgcctg cacgttttcg
     8161 atgtacccaa ggcgcagggc aacctctacc aacgtttggc agtcgcaacg cagtggctga
     8221 aaacgcatcc gaacgcgccg attaccatca tcccgcaaat caaagtgcgc gaccggcggc
     8281 acgcgatgga ctttttaaaa caaatcgaag cgcagggcgg cgaaggcgtg atgctgcgcc
     8341 agcccgaatc ccgttacagc ggcggcagga gcagccaatt attgaagctg aaaagccaat
     8401 acgacgacga atgcacggta acgcggcact atgagggcaa agggcgaaac gccggacggt
     8461 tgggcgcggt cggctgcaaa aaccgacacg gcgaattccg catcggcatc ggtttcaaag
     8521 acaaagaccg cgacaatccg cccaaaatcg gcacgctgat tacctaccgc taccgtggct
     8581 ttacgcggaa aggcacgccg aaatttgcca catttgtgcg cgtgcgtacc gaccgctgag
     8641 caggacagtt cagacggcat ccgatacttt ggtttataat tttcctttta ccgaccgatt
     8701 ccgacatatg accgatttag aaaccaaacg ccttgaaaca caggcgatgc ttgaaaacgc
     8761 cgatcttttg ttcgaccaag gccaatgccg tgccgcactg caaaaagtgg cggacgagat
     8821 tacgcgcgat ttgggggata aatatccgtt gctcctgccc gtgatgggcg gggcggtggt
     8881 gtttacgggg cagttgctgc cgctgttgcg ctttccctta gactttgatt atgttcacgt
     8941 ttcccgttac ggcgacaagc tggagggcgg cgcgttcaac tggaagcgta tgcctgatgc
     9001 ggaacaaatc cggggcaggc acgtggtcgt gttggacgat attttggacg aagggcatac
     9061 gatgtccgcc attcaagcca aacttttgga aatgggtgcg gcaagctgcc gtgcggcggt
     9121 gttcgccaat aaattaatcg acaaagaaaa accggtcaaa gccgattatg tcggactgga
     9181 tgtgccgaac cgttatgttt tcggttacgg catggatgcg gcgggctgct ggcgtaattt
     9241 gggcgagatt tacgcattgg gcggaaaata agggatgcga tgccgtctga aggcctttca
     9301 gacggcatcg cgcccatacg ccggcaggat taatgaggaa caggacgcat caatatgata
     9361 gggcttttaa tcatcacaca cgaaaccata ggcgaagcct accgcaagct ggcgcatcat
     9421 ttttttccgg gcgggctgcc tgaaaacgtc cgcatactcg gcgtgcagcc gacggaaggc
     9481 caagacgaca ttatcaacaa cgccatttcc gcgctgcaag agtttcctga aaaccacggt
     9541 gtattgatta tgaccgacat cttcggcgcg accccctgca atgccgcccg ccggctcgtg
     9601 cgcgaaaaca aatcggcgat tttgaccggg ctgaacgcgc cgatgatgat taaggccgtc
     9661 caatattcgc cggcggcgga agactttgcc gcctttaccg aatgcgtcag agaggcggcg
     9721 gtaaaaggca ttttcgccat cacgtccgcg cccgaagatt tggtgtgccg gcgcagcggc
     9781 gatgccgtct gaagaagcgg cagggcagga aaacatttta aacggcgtct gctgccgata
     9841 tatagcggat taacaaaaat caggacaagg cggcgggccg cagacagtac ggatagtacg
     9901 gaaccggttc gcccggtgct tcagcacctt ggagaatcgt tctctttgag ccaaggcggg
     9961 gcaacgccgt actggttttt gttaatccac tatacataac acgggaaccg aaatgctcaa
    10021 acaatccatc gaaatcatca acaaactcgg actccacgcc cgcgcgtcca gcaagttcac
    10081 ccaaaccgcg tcccaattca aaagcgaagt ctgggttacg aaaaacggca gccgcgtcaa
    10141 cggcaaaagc attatggggc tgatgatgct cgcagccgcc aagggtacgg tcatcgaact
    10201 ggaaaccgac ggcttggacg aagccgcagc catgaaggca ttgaccgact taatcaacga
    10261 ctacttcggc gagggcgaat aatgagtatc gtgctgcacg gcgtggcggc gggcaaaggc
    10321 attgccgtcg gttgcgccca cctgattgcg cgcggtacgg aggaagtgcc gcagtatgat
    10381 gttgctcagg cggacaccga tgccgaagcc gaacgtttcg atgccgccgt caaagccacg
    10441 cgcaaagagt tggaacagct ccgcagcgcg attcccgaaa acgccccgac cgagttgggc
    10501 gcgttcatct cgctgcacct gatgctcttg accgatgtta ccttgtcgcg cgaacccgtc
    10561 gatattttaa gggaacaaaa aatcaacgcc gagtgggcat tgaagcagca gagcgacaaa
    10621 ctcgccgccc aattcgacaa tatggacgat gcctatttgc gcgaacgcaa gcaggatatg
    10681 ctgcaagtcg tccgccgcat ccacaacaac ctgatcgggc agggcaacga gttggaggtt
    10741 gccgacaacc tgtttgacga aaccgttctg attgcaaacg acctttcacc cgccgacacg
    10801 gttttgttta aagagcagcg cattgccgcc ttcgttaccg atgccggcgg ccccaccggg
    10861 catacggcga ttttgggcag gagcttggac atcccgtccg tcgtcgggct gcacaacgcg
    10921 cgcaaactga ttaccgaagg cgaaacggtc atcgtggacg gcatcaacgg cgtgttgatt
    10981 atttcgccgg atgagtcggt gttgaacgaa taccgccgcc gcgcccgcga ataccgcagc
    11041 cacaaacgcg atttgaacaa gctcaaaaaa accgccgccg ccaccgccga cggggtctgc
    11101 atcgagcttg tgggcaatat agaatccgcc gaagacgtga aaccgctgca caacctcggc
    11161 gcagacggca tcgggctgtt ccgcagcgag tttctttacc tgaaccgcga tacgatgccg
    11221 tctgaagacg agcagtacga agtgtacagc gcgattgtca aaaaaatgaa gggcaaaagc
    11281 gtaacgatac ggacagtcga tttgggtgtg gacaaaaatc cgcgctggtt cgggaaaaac
    11341 agcacgccca acggcagcct caaccccgcg ctgggcatga ccggcatccg cctgtgcctt
    11401 gccgaaccgg tcatgttccg cacgcagatg cgcgccatcc tccgtgcggc ggtacacggt
    11461 cccgtccgca tgatgtggcc gatgattacc tccgtatccg aagtgcgcca gtgcctcatc
    11521 cacctcgaca ccgcgcaacg ccagcttgcc gaacgcggcg atgccttcgg cgaagtcggc
    11581 atcggctgca tgattgaaat tccgtctgcc gcgctgaccg tcggcagtat tttgaaactg
    11641 gtcgatttca tctccgtcgg taccaacgat ttgatccaat atattctgtc cgtcgatcgc
    11701 ggcgacgaca gcgtcagcca tctctaccaa cccggacatc cttccgtgct gaaaatgctg
    11761 caacacgtca tccgtaccgc caaccgcatg gacaaagacg tgtccgtatg cggcgagatg
    11821 gcgggcgata ccgcgtttac ccgcgtttta ttgggtatgg ggctgcgccg tttttccatg
    11881 aatccgaaca acatcctgcc cgtcaaaaac atcattctgc acagcaatgc cggacagctc
    11941 gaaggcgata ttgcgaaagt catccgctgc gaagacgaag agaagtcgga aaagctgatc
    12001 aaacagatca acagcgtgtc tgtcgcggaa gaagccgaag tcaagggacg gaaataaata
    12061 ttgttgacaa tgcgagcggg ttgcagtcaa ataacgccct taaaaaatac agctgctttg
    12121 gtcaagaaat gccgtctgaa aaattttcag acggcatttt gtttggcagg catttctgcc
    12181 gcatcatcgg aaacggacga tacgcccttc atcgacgcgg atgcggaccg taccgtttcc
    12241 ggaaataccg tccgtatgtt gtccgacagt caggtttaag gtcagctcgc cgtgttcggg
    12301 atggacggcg gaaagccgga gcgagtcggg caggcggacg agggacagca ggcggcattc
    12361 cgttccatga ttgtccaagc acacggcatt ttgcggaata tggcggtcat cgtcggtatt
    12421 gggcagcccc atcagacggg cgacctgcac gccggcaggc gtttgaatca aggtttcggg
    12481 cgtaccgcat tgaaggattt tcccctcgtg catgacggcg atttcgtccg ccgccgtgca
    12541 ggcctcttcg ggcgaatgcg ttaccaaaac ggcagggatg ccgcccttgc ggatgcgttc
    12601 ggcggtcata cggcgcagcc ggtcgcgcaa atgcgtgtcc aaactggaaa acgattcatc
    12661 cagcaacagc agggaagggc ggacaaccaa agcgcgcgcc agtgccaacc gttgcttctc
    12721 gcctccggaa agtttttcag gcttgcggtg cgcctcgttt tccagcccga cttcggcaag
    12781 tgccgacaag gcgaggcgtt cggcttcggc tttcggcatt ttttgcattt tcaaaccgaa
    12841 tgccgtattt tccagcgcac tcatatgggg aaacagcgcg taatcttgaa acatcagcga
    12901 gatacggcgt ttttcgggcg gcatacaggt aatgttttcc ccgttcagcc gaatttcgcc
    12961 gccgtccggc cggacgatgc ccgcaatcat attcagcagg gtggatttgc cgcagcccga
    13021 ccgccccagt acggcgagta ttttgccgcg cccgacagtc aggcagatgt tgtcggcgac
    13081 cgttttgccg ccgaagcatt tgcagagtcc gttcagttca agcatggcgc atcctataaa
    13141 cgtatgccgt ccagccactc ggacagcgga tgggcggcat caatcagacc gtaacggtaa
    13201 aacgcgtcca gcgtaaccag ttgcgcgtcg tgcatcatgt ttttcgacaa catggcatcc
    13261 aataggccgc caatgtccat cttttcaaaa cccgctacct cgccatcctg attttcaggc
    13321 aggaaggttt cgggcaggac ggcatcgaac acatacagga tttcattgtg cacacctcgg
    13381 ctgacggggc gaaggctgtg cagccgcgat actgggcgga tgagcggaaa cagcgtttta
    13441 tccaaaccgg cttcttcgct gctttcgcgg cacacggctt cagacggcat ttcgccgccg
    13501 gaaacaccgc cgccggcaat attgtcgagc ttgccgggat cgactgcttt gtgcggactg
    13561 cgcctgccta tccaaaaatg ccatctgccg ttcgattcga ccaaaccgtt gagatggacg
    13621 gcgcggctga gtagtccgaa cggacggaaa gcggcgcgtt cgagcgtgaa caaggggttg
    13681 ccgccgccgt cggtcaggtc gaaacactcg ttgcgccatc cgtgaagcag ccccgccttg
    13741 ttccatgtgc gggcgaggtg ctgcaagcgt ccgcccatat ccggccagcc gtccgcattc
    13801 agaaaaatgc cgtctgaaga ctcggagcag cctgcctccc agtctttttt gatgcgctca
    13861 gcccattccg gcgacagatt gcccaaagga agacggttca gatacagcgt tttccagcaa
    13921 ctttcggcac cgtaacttgc ttttgcccgc tcgaacaggg catcaaggtc ttgtttgctg
    13981 acggattcgg taaaacggac ggtcggcata gccggctttc ttgaacacaa tgcggaagat
    14041 tgtagccaaa ccgcctgaat ttgcaaccgc aaacagacgg cggcctgccg ttccgatatt
    14101 gcggcaggaa ggaaaatccg gcaaaaaacg gaggcggcag gaaacaggaa aaacaaaacc
    14161 ccctcggcat tgaaccgagg ggtttgatat ttggttgcgg gagcaggatt cgaacctacg
    14221 accttcgggt tatgagcccg acgagctacc atgctgctcc atcccgcgtc agaagatgaa
    14281 actatacggc agatttttta tgttgtcaaa cattatttcc gtgaaaaatc ataaagtttt
    14341 ccgtccggcg gcttatgcct gatttgaaat atcattttct ttacaaaagt tcatgttcgt
    14401 gatttaattt tggttaacat cgaaacaggg gtgctgcctg atgttcaggc ggctgagaaa
    14461 taccctttac acccgatcgg gataatacct gcgtggggag ttttcacgga ttctgtcttt
    14521 cagacggcat tggttttcaa atgccgtctg aaaacgcaaa acgctcctgt ttctttattc
    14581 taaacgagaa aacaggagca ttttttatga ctacgccaaa aaaaaccgcc aaaacttccg
    14641 gcaacgaagc gcgcgaactt tccgacttga gcgaagacat cggcatccgc ttcaaatatc
    14701 agaactccga acgcgtgtat ctgcaaggca gccgcgacga catccgcgtg cctttgcgcg
    14761 aaatccgtca ggacgacacc tacacggcgc aaggtacgga agccaacccg cctattccgg
    14821 tgtacgacac cagcggcgca tacggcgatc cggcggcgca catcgacctg aaacaaggcc
    14881 tgccgcacat ccgcacggcg tggctggacg aacgcggcga taccgaaatc ctgcccaaac
    14941 tctccagcga atacggcatc gaatgcgcac acgatccgaa aaccgcccat ctgcgcttca
    15001 accaaatcac ccgcccgcgc cgtgccaaag ccggccgcaa tgtaacccag cttcactacg
    15061 cgcgccaagg cattatcacg cccgaaatgg agttcgccgc catacgcgaa cgcatgaagc
    15121 tggacgagct tttcagacgg cctgaatacg ccaagctctt gaaacagcac acagggcaaa
    15181 gtttcggtgc gaacatcccg acccgtcccg accaaatcac ccccgaattc gtgcgccaag
    15241 aaatcgccgc cggacgcgcg attatccccg ccaacatcaa ccaccccgaa ctcgaaccga
    15301 tgattatcgg ccgcaacttc cgcgtcaaaa tcaacggcaa cttgggcaat tccgccgtaa
    15361 cctccagcct gaccgaagaa gtcgaaaaaa tggtgtggtc gctgcgttgg ggcgcggaca
    15421 cgattatgga cttatccaca ggcgcgcaca tccacgaaac gcgcgaatgg attatccgca
    15481 acgcgcccgt ccccatcggc acagtgccga tttaccaaac tttggaaaaa accggcggca
    15541 tcgccgaaga tttgacttgg gatttgttcc gcgacacctt aatcgagcag gcggaacaag
    15601 gcgtggacta tttcaccata cacgcgggcg tgttgctgcg ttatgtgccg atgaccgcca
    15661 accgcctcac cggcatcgta tcgcgcggcg gttcgattat ggcgaaatgg tgtttggcac
    15721 atcatcggga aaacttcctc tacacgcatt tcgacgaaat ctgcgaaatc atgaaggcgt
    15781 atgacgtatc gttcagcttg ggcgacggcc tgcgccccgg ctgcattgcc gatgccaacg
    15841 acgaatccca attcgccgaa ttgcacacct tgggcgaatt gaccgataaa gcgtggaaac
    15901 acgacgtaca agtcatgatc gaaggccccg gccatgtgcc gctgcaacgc gtcaaagaaa
    15961 atatgaccga agagttgcaa cactgttttg aagcaccgtt ttacacactc ggcccgctcg
    16021 ttaccgacat cgcccccggc tacgaccaca tcacttcggg cataggcgcg gccaatatcg
    16081 gctggtacgg cacggcgatg ctttgttacg ttacccccaa agaacatttg gggctgcccg
    16141 acaaagaaga cgtgcgcacc ggcatcatca cctacaaact cgccgcccac gccgccgacc
    16201 tcgccaaagg ctggccgggc gcgcaattac gcgacaacgc cctgagcaag gcgcgtttcg
    16261 aattccgctg gcgcgaccaa ttccgcttaa gcctcgaccc cgaacgcgcc gagagcttcc
    16321 acgacgaaac cctgcccgcc gaaggcgcga aaatcgccca tttttgctca atgtgcggcc
    16381 ccaaattttg ctcgatgaaa atcacgcagg aagtgcgcga ctacgccgac aagcaaaaag
    16441 cccaacggca gggtatggag gaaaaagcgg tcgagttcgt caaaaaaggc gcgaagattt
    16501 acagttgaaa cgtcaagcaa aaaatgccgt ctgaagcccg gaaaaaaggc ttcagacggc
    16561 attttttcgc ttg
//
LOCUS       DAWXHA010000048        16510 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.048, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000048 DAWXHA010000000
VERSION     DAWXHA010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16510
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.048"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            175..2202
                     /locus_tag="AABD07_001146"
     CDS             175..2202
                     /locus_tag="AABD07_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HFB2355691.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSGLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITVGAPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFGVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLGLAFLLLFFVL
                     AADPTVYLLSAFGDNIGNYLGNLVRLSLKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMASS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVRIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            complement(2292..3845)
                     /locus_tag="AABD07_001147"
     CDS             complement(2292..3845)
                     /locus_tag="AABD07_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HFB2355692.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGETAEGDAFFENVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGVPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIHKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGEDEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFEGNK"
     gene            complement(4097..5290)
                     /locus_tag="AABD07_001148"
     CDS             complement(4097..5290)
                     /locus_tag="AABD07_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL family lipase"
                     /protein_id="HFB2355693.1"
                     /translation="MNPKHFIAFSALFAATQAEALPVASVSPDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLRSVAQGSGEAFRILQIGDSHTAGDFFTDALRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHSGNWQSFTSRNNTGDFPLGGILAQTGSGGGMTLTASDG
                     KTGKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALPLAIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVLLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAQGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(5287..6270)
                     /locus_tag="AABD07_001149"
     CDS             complement(5287..6270)
                     /locus_tag="AABD07_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HFB2355694.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYALSDGIKTFLSGETPPTAQDGGSADMPPEAAASEAAPPAGGT
                     EWKQGTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESANLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKVKLDGQMRYLDKLLSEHLKGKIILIPTAQTLSGGKGR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAEKIMEKIVFEPSTQPSSTQP"
     gene            complement(6281..7717)
                     /locus_tag="AABD07_001150"
     CDS             complement(6281..7717)
                     /locus_tag="AABD07_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HFB2355695.1"
                     /translation="MPLLSVEFALFFIVFLPIYWGFAKYPSVQNLLLLAAGMGWLYHI
                     SPVFAAIIVLYSSCVYLLGELLRSDRESTRRFWLGCGIAASITVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSVAYLVYCFRAPHAARFGWHELLLHLSFFPTVTS
                     GPIIRAAAFKSTDGEQAGALAQIRTRRPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALALLNTGDRYFGRDALCRLKYLAPLSWFVTFHFVCLSFVVFNTANPD
                     DAGAVFSALFANAGGWNAPQRADMLLLASFASLMLLYPYLQRAFDGTVKGLEKIPMWL
                     WFIQISIILLLIIVLAPSGIPGFIYANF"
     gene            complement(7847..9006)
                     /locus_tag="AABD07_001151"
                     /pseudo
     CDS             complement(7847..9006)
                     /locus_tag="AABD07_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
     gene            9447..9659
                     /locus_tag="AABD07_001152"
     CDS             9447..9659
                     /locus_tag="AABD07_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HFB2355696.1"
                     /translation="METLLLDIVGMSCGGCVKSVTRILESVKGVASVEVSLENKSATV
                     GYDPAQTAAEALIEAVEDGGYDAALK"
     gene            complement(9638..9847)
                     /locus_tag="AABD07_001153"
     CDS             complement(9638..9847)
                     /locus_tag="AABD07_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355697.1"
                     /translation="MQRAKAAFFFLFGIFCLSEGTIARKFNQFILPVQLNQMPPEGAE
                     RASDGIGETQRLQTAFLPLYFNAAS"
     gene            9859..11385
                     /locus_tag="AABD07_001154"
     CDS             9859..11385
                     /locus_tag="AABD07_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HFB2355698.1"
                     /translation="MPGVSDIKNSYDDLMYESKAFSQTAINALEACARMMGLKPTAAA
                     KAKVLELGCSMGRNIITQALYYPDAEFVGIDLSGRQVAQGNAIIEKMGLENVRLEEKD
                     ILTVDESFGKFDYIIVHGIWSRVPDAVKDKIFSICRNNLTEYGIAYISYNVYPGWKRQ
                     EQLRDIMQFAGRDALGEPLEARTRKGLDAIKALAEILENDKGLGGGKLPAIQKILNHN
                     TYYVAHEYMEIFNNPIYVNGFIEWANRHRLAYIGDTDLHVSFVSWMAEHTRERILALA
                     GGDYIAKEFYSDILSDRQFHRSLLCREEVGDTVRRDESVAVEVIESLNFRPARGETIN
                     FDENDTLLSGIRDVMKTGEAFKTEDVAENLARRFPGLEFDRMKINSQLLLQTILGRFS
                     VSSDNAGKPFFEDHKTYVPARFTNYAAAFVEHGAGAFVRPANRYNESTPSFGYGHLYI
                     MRQLSRPTSKQALIETVAENLNIVSATPDGLTFHPPAEVYVEEILADLADRHFLVSAD
                     "
     gene            11467..12564
                     /locus_tag="AABD07_001155"
     CDS             11467..12564
                     /locus_tag="AABD07_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HFB2355699.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYVLGFGSGKVQAALGQNLLQAGLPLMQ
                     VWQENLASEGITLFANPLSPDTPARALSDGSHTRQRMAMDVFAANAIRAVRMQGPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFCWQLSFTDNIAVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQENIPSYAEALKREGRNPFFSA"
     gene            12678..13793
                     /locus_tag="AABD07_001156"
     CDS             12678..13793
                     /locus_tag="AABD07_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000706318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HFB2355700.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTAGNDGGIGIAAGLGYQFYDEDGNALP
                     ACGQSLLNPASVSIENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVPPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSFAEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGYLLNMPKI"
     gene            13861..14373
                     /locus_tag="AABD07_001157"
     CDS             13861..14373
                     /locus_tag="AABD07_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HFB2355701.1"
                     /translation="MPSERVSASGGIALEQGWDMKKPKILFVCLGNICRSPMAEYILR
                     RRAAEAGIPLETDSAGTSGWHDGEDMHRETAKILKKYGIDASGFTSRKIRQSDATAFD
                     YIIAMDGKNLSELEKTFGRRPEKIFKLTDLIPESGYDHVPDPWYMGDFEETYRLADAG
                     CRALLEKISK"
     gene            14450..14926
                     /locus_tag="AABD07_001158"
     CDS             14450..14926
                     /locus_tag="AABD07_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HFB2355702.1"
                     /translation="MKTNFKQKIIEQARREDLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWADQGVLHKVAAVNGYILCSHAQHECNDHCHDHEEA
                     EAHHSAFILVCTECGAADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            14914..15840
                     /locus_tag="AABD07_001159"
     CDS             14914..15840
                     /locus_tag="AABD07_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HFB2355703.1"
                     /translation="MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLAAGKTD
                     LCTPEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIQWLDIPVVEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            15905..16462
                     /locus_tag="AABD07_001160"
     CDS             15905..16462
                     /locus_tag="AABD07_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFB2355704.1"
                     /translation="MKPKFKTVLTALLLAVCLPSMAATRVLMETDMGNIRLVLDESKA
                     SKTVANFVRYARKGFYDNTIFHRVIGGFVIQGGGLTEDLVQKATDKAVANESGNGLKN
                     TVGTIAMARTADPDSAAAQFFINLADNGSLDYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATLGLYQNVPVQPVKIRRVVVGQ"
BASE COUNT         3860 a         4178 c         4667 g         3805 t
ORIGIN      
        1 cccggcagct aaaaatcctg cgggatcggt gtggaattta gggataatct agtacagccc
       61 catttcggcc ggtttgtgca tttcgtcatc cggaagccgg tattttgccg gcaggttttg
      121 actactttgc ccgatgaccg ggtttgtctg tttttaacaa aggagtgaga aggtttgtcc
      181 ctgtctgaat ttatagaacg ccgaacgtca tttaatccga tggttatttt gacgactttg
      241 ttttttgtgt gtgttttggt ggtattggtt ttaaccgtgc cggatcaggt gcagatgtgg
      301 ctcgaccggg caaaagaagt catttttacc gagttcagct ggttttatgt tttaacgttt
      361 tccatttttc tgggttttct gctgatactc tcggtcagcg gtttgggaaa catcaggcta
      421 ggacgggatg aagatgtgcc ggaattcggc ttcctgtcgt ggctggcgat gctgtttgcg
      481 gccgggatgg gcgtgggcct gatgtttttc ggcgtggcag agccgttgat gcattatttt
      541 tcggacatta cggtcggcgc gccggaacac aggcagcagc aggcattgct gcacacggtg
      601 ttccattggg gcgttcacgc ctggtcggtg tacggtacga ttgcattggc tttggcttat
      661 ttcggtttcc gctacaaact gccgcttgcc ctgcgttctt gtttttaccc cctgttgaaa
      721 gaaaaaattt ccggaaggtt cggcgatgcc attgatatta tggcgttgct tgctactttt
      781 ttcggcatca tcaccacatt ggggttcggg gcttcgcaac tgggcgccgg attgcaggaa
      841 atgggctgga ttgccgaaaa cagcttcggc gtgcaggtct tgattatcgc cgccgtaatg
      901 tccctcgccg tcgtttcggc aatatccggc gtggggaagg gcgtgaaggt gttgagcgag
      961 ttgaacctgg gccttgcgtt tttgctgctg ttttttgttt tggcggcgga ccccactgtt
     1021 tacctgttgt cggcattcgg cgacaacata gggaactacc tcggaaatct ggtgcgcctc
     1081 agtttgaaaa cttatgcgta cgaacgggaa cacaagccgt ggtttgaatc ttggacggtg
     1141 ctttattggg cgtggtggtg ttcttgggcg ccgtttgtgg gtttgtttat cgcgcgcatt
     1201 tcaaaggggc gcaccatccg cgagtttgtc ttcggggttt tgctcatccc cggcctgttc
     1261 ggcgttttgt ggtttaccgt cttcggcaat acggcgattt ggctgaatga cggggttgcg
     1321 gggggaatgc tcgaaaagat ggcctcctct ccggaaacgc tgctttttaa attctttaat
     1381 tacctccccc tgcccgaact gacgagcatc gtcagcctgc tggtcatttc cctgtttttt
     1441 gtaacttctg ccgactccgg gatttatgtc ctgaacaata ttacctctcg ggacaaaggc
     1501 ttgagcgcgc cacggtggca ggcggttatg tggggcgtgc tgatgtctgc cgttgccgtt
     1561 ttgctgatgc gctcgggcgg actcggcaac ctgcagtcta tgaccctgat tgtttccctg
     1621 ccgtttgccc tgctgatgct gataatgtgt ttcagcctgt ggaaaggctt gagtgcggat
     1681 aagaaatatt ttgagaccag ggtcaaccct accagtgtat tttggacggg cggcaagtgg
     1741 aaagaacggc tggtgcggat aatgagccag acgcaggagc aggatatttt aaaattcctc
     1801 aaacataccg catcgcccgc tatgcacgag ttgcaacggg agctttcgga agaatacggc
     1861 ttgagcgtcc gggtcgataa gatgtttcat caggacgagc ccgcaatcga gttcgtcatt
     1921 cggaaagaga cgatgcgcga ttttatgtac gggattaagt ctgtcgggca ggatgtatcc
     1981 gaccagttga ttaacgacgg caagctgccg catatccggc accagacaac ttacaaaccc
     2041 tacgcttatt ttttcgacgg gcgcgtcggg tacgatgtgc agtatatgaa caaggacgag
     2101 ctgattgccg acattttgaa aaactacgaa cgttatttga tgttgttgga tgatgtcggt
     2161 caggaactga tggcgcacga gcaggtggaa ttggcagagt aaatatcctc gctccggcgt
     2221 ttgccaaaaa aatgcggtga atcagattca ccgcattttt ttgccggacg gggcttcgga
     2281 cggcacggcg ttcatttgtt tccttcaaac tgctccttca gcacccgttt caatactttg
     2341 cccgtagcgt tgcgcggcag cccgtcttta aagtggatct gtttggggat tttgaaattt
     2401 gccagcacgg tacgcaggtg gcggcggatt tcgtcctcgc ccaaatccat accttccttc
     2461 aattggacga aggcgacgat ttcctcgtcg gcataacggt ctttcacgcc gatgacggcg
     2521 gcggcttcga cggcatcgag tttgtggatt tcttcttcaa tctcgcgcgg atagacgttt
     2581 tgacctttgg aaataatcaa atcttttttg cggtcgacga taaagataaa gccgtcctcg
     2641 tctatggtaa cgaaatcgcc cgttttcaac cagccgttga cgatggtttc atcggtggcg
     2701 gcaggcatat tgaggtagcc ccgcatcacc gaaccgcccc tgacgatcag ttcgcccact
     2761 tcgccgcgcg gcacttcgac caattcttca tcgacggctt tggcttccaa accgggcagg
     2821 gggatgccga cgctgcgggc tttttgccgt tcgggcgtat tgacggcgac gacgggcgag
     2881 gcttcgctca gtccgtagcc ttccagcaat ttggcgcggg ggaacttggc tttaaaatcg
     2941 aggatggttt gttccgccaa aggcgcgccg ccgctgataa acaggcggat gcggttgaac
     3001 catctgaaat accaagggat tttcgccttg ctcatcgcgg tgtaaatcgc gggtacgccc
     3061 aaaaacacgg ttgcgcgttt gagcagggcc tgtttcaaaa cgttggaaaa ggggaaaacg
     3121 gatttgacca aaataatcga acacgccata taaatcggca gcagtaccat agccgtcagc
     3181 gtgaagctgt ggaacatcgg caggaaaacg ataaagcggt cgcgtttgga aattttaaag
     3241 atgcgttcga tgccgttcag gttggcgaac aggttggcgt aactgattag cgcgcctttg
     3301 ggatgccccg tcgtgccgga ggtgtagatg atgtgtgcca aatcatttat ccggggttgg
     3361 cggcccaagt cgggtttttc ggggaagcgg cgcacgtttt caaaaaaggc atcgccttct
     3421 gccgtttcgc cggccggccg gcttttgtcc gtccaaatga ttttttcgac gggcgtttgc
     3481 gccttcaggc ccgccaattc ttttgacagg ccggccgagg cgaacaggaa gcgcgccttg
     3541 cagtcattca ggatatacgc gtattcgctg tttttcaaaa atgtgttcat cggtacggcg
     3601 accgcgccga tggcggagac ggcgaaatag gcggtaataa attctgtgga attggaaacc
     3661 gccagcgcga ccgtgtcgcc gaacttcacg ccgatatttt gcagatacgc cgcgacggct
     3721 tcggcttcct gcttgagcgc gcggtaggcg gttttttcct tgccatcgaa cactgccgtg
     3781 ccgttgccgt ttttgcggca ggcggcggcg agcatttcgt agaaattggc ataagtccgg
     3841 ttcatgaaac ttcctttatg gttgcggacg gcgaatgccc tcatttgaaa acaatatgcc
     3901 gtctgaaaac ggaaggcggc agtttatcat ctttgccttc agacggcata tcaaacgccg
     3961 cctttgcgcc gcatgccgga ggttcgcccc cgtccttcct atgtctgacc tgaatgccgt
     4021 ctgaatcaat atgaagatat acgtttcaga cggcatcccc ctgttgtgga aataccgtcc
     4081 gcccccccct gtccgattat tgcctgattg cggcggcgcg gacgagttct tcgaggctgt
     4141 cggcaagcat ttccgccgcg cgccggtagc cttgggcgga gaagtgtacg ccgtctttgg
     4201 cggcccatcc ttggttgagc cagtttttca tgctgcatat gccgcccatt gcgttttgcc
     4261 aagaccaaaa catcgtctgc ccctgacggg cgacgcgccg ctgcatctgt tggacttcgg
     4321 tcaggaggac ggggcgcgtg ccgcatacgc cgagcgtgtt tttcagggat tcgggcgcgc
     4381 cgatgatgag gatgccggcg gcgggcaggc tgtcgcggat ttggcggacg gtatccagcc
     4441 atttttgttc ggtatcggca atgtcgatgt tgttgttgaa ggcttcgttg gtgccgtagg
     4501 aaaggataac caaatcggcg ccggtttggg caaggtcgtt catacggtcg gcacgccatt
     4561 tcgaccactg ggtcaattgt gcgccgttga tgcccatcgc ggaaacggta atgccgccgg
     4621 cgggattttc gatgttgatg aagccgatgt cccacggcat ttcggtctgt atggccaggg
     4681 gcagtgccgc gcccgtatcc agtacctgcc agccgccgcc gttggcggag acggtgttgc
     4741 cgttgacggt cagggtttgt tcggcgagca gcggtttggc aaacagggaa acgcgctgtt
     4801 tgccggtttt gccgtcagac gcggtcaggg tcatgccgcc gccgctgccg gtttgggcga
     4861 ggatgccgcc gagcgggaaa tctccggtat tgttcctgct ggtgaagctt tgccagttgc
     4921 cgctgtgacg gacggccgcc atgcgctgcc ctttgacgtt ggcggggtaa acccagccta
     4981 tgccgccgtc gccccatgtt ttttgcaggc gtttgcgcag ggcgtcggta aagaagtcgc
     5041 cggcggtatg cgagtcgccg atttgcagga tgcggaaggc ctcgccgctg ccttgtgcga
     5101 cggatcggag ttttttcatc caaggcgagg cggcggcgtt gccgtagtcg gtcagcagcc
     5161 cgtttgtatc ggtgtagggg gcggacgggg aaacggtaac ggtgtcgggg ctgacggagg
     5221 cgacgggcag ggcttctgcc tgcgtggcgg cgaacagggc ggaaaatgcg atgaagtgtt
     5281 tggggttcat ggctgtgtac ttgatggttg cgtactcggt tcaaaaacga ttttttccat
     5341 tattttttcc gccagcagtt tttgtccttc ggcggtaaag tgtatgccgt ccttactgcg
     5401 gtagcggacg ggtttgccgt tgacgttgac ggaatcggtg tagcggcctt tcccgccgct
     5461 cagtgtttgc gcggtgggaa tcaggatgat tttgcctttc aagtgttccg aaagcagttt
     5521 gtcgaggtag cgcatctgac cgtcgagctt gacttttttc atgtagggga tgccgagcca
     5581 gacgacttgg acgcggtgcg tgtgtgcggc ttcaaggatg cggtcgacgc gtttcaggta
     5641 ttcttgcgcc cattcgtcgg aagcgaattt gaggtagcgt ttgccgacgg ggaaatccca
     5701 cgggtcgttc gggccgagga agacggcgag tacgctgatt tcgggatgtt ttttcaaggt
     5761 ttcttcaatc gttttcggcc agtcgaagaa tgagggatag gaaagccccg tgctttgttt
     5821 gctgaggttg gcggattcga tgccgtattg ctgtttcagg cttttttgca cgaagggcgc
     5881 aacgccctgc atcagcgaat ctccggcgaa aaagactttg tcgccgctgc ggacggcggc
     5941 ggcttcggtg ccttgtttcc attctgttcc gccggccggc ggggcggctt cggatgcggc
     6001 ggcttcaggc ggcatatctg ccgaaccgcc gtcttgagcc gtcggcggcg tttcgccgga
     6061 caggaaggtt ttgatgccgt ctgaaagggc gtaggcgttt tcttgcaacg ccgctccgct
     6121 ccgccaccat ccgtaggcgg caagcggttc gagcgggctg ttgcggtggt aggtctgctg
     6181 ccagtaggcg ttgatggggt tttggctgaa ccacacggca atcagggcag acatcagtat
     6241 ggaggcgaaa agggaaagaa agtttttcat gtccaaaccc ttaaaaattg gcataaataa
     6301 agccgggtat ccccgaaggg gcgaggacga taatcagcag caggatgatg gaaatctgga
     6361 taaaccacag ccacatcggg attttttcca aacctttgac cgtgccgtcg aaagcgcgtt
     6421 gcaggtaagg gtagagcagc atcaaggatg caaacgaggc aagcagcagc atatccgccc
     6481 gttgcggcgc gttccagccg ccggcattgg caaagagggc actgaaaact gcgcctgcat
     6541 cgtcggggtt tgcggtattg aagacgacaa agctaaggca gacgaaatgg aaggtaacaa
     6601 accacgagag cggcgcaagg tatttcagac ggcatagcgc gtcgcgtccg aaataccggt
     6661 cgcccgtgtt gagcagcgcc agtgccgtgc cgtgcagcgc gccccaaatg aggaagttcc
     6721 agccgtagcc gtgccagatg cctgagagta ccattgccgc catcaggttg agctgtgtcc
     6781 gcaaaaagcc ttttttgctg ccgcccaagg ggatgtagat gtagtcgcgt atccaggtgg
     6841 aaaggctgat gtgccatttg tcccaaaatg cgcggatatt cgcggcacga agcggtgcgg
     6901 agaagttttt gggcagccgg aagcccagca gcatcgccat accgataacc aaatcggaat
     6961 atccggaaaa gtctaaaaag agttggaagg tatagccgta cacgcctgcc aacacgcccc
     7021 agccgtcgaa ttgggcggga ttttcaaata cgggcgacac ccagttttcc gccagcatcc
     7081 ccgccagcca ccattttttg gcaatgccca gtaaaatcag ggaaacggcg agggcggggc
     7141 ggacgggcga acgcggtcgg cgggtgcgga tttgcgccag tgcacccgcc tgttcgccgt
     7201 ccgtgctttt gaatgcggcg gcgcggataa tcgggccgga ggtaacggtg gggaaaaaac
     7261 tcaggtgcag cagcagctcg tgccacccaa aacgcgcggc gtgcggggcg cggaagcagt
     7321 aaaccagata ggcgacagac tggaaggtat aataggaaag ccccagcggc atcaggatgt
     7381 cgattgcgcc gccttttccg gcatattgtg caatcagcgg acggaaaaaa tcgaaatatt
     7441 tgaaaaagcc caaaacggta atcgaggcgg caatgccgca ccccagccaa aagcggcgcg
     7501 tactttcgcg atcggaacgg agcagttcgc ccaaaaggta cacgcaggag gaataaagga
     7561 cgatgattgc cgcaaatacg gggctaatat ggtagagcca gcccataccg gcagccaaaa
     7621 gcagcaggtt ttggacggac gggtatttcg caaagcccca gtaaatcggc aggaagacga
     7681 taaaaaacag tgcgaactcg acagacagca gcggcataaa ccatccttgg gacaaaaaaa
     7741 taggcgttaa aacacggcaa agcccgttat tttaagcagg ggcggatatt ccttcaatca
     7801 aaatgccgtc tgaagggcgg gaggggcttc agacggcatc gctcggtcag gttcggatat
     7861 ggtggttcaa attcaggcag acccgcaaac ctgccgccgc cgtcagcata cccgcaacgc
     7921 cgatgcagga aatgcccgag tattgcgtaa cctaatgtcc cagcagtgcg ccgccgccta
     7981 taccgacgtt gtaaagctcc gaataaatcg agttggcaag gtctgcggca tcggaggcga
     8041 aatccaaaac tttggcaacc atccccaagc tgacgaccac aatcgccgtc ccccatacga
     8101 acaccaacgc gtaaatggcg gcaggaaaat gcgccaaagg cagcaaaagc cccgaagaga
     8161 gggcgataag cgacaccgcg cccgccaaaa atgcgcgcgg atgtttggca aaccatttgc
     8221 cgaacaggta agacgcggca aaacccgcca ggccgtacag ccccggaacc accgtaacct
     8281 gccgcgcgga gaaaccgccg atttggatga cgaagggctc gatgtagctg tatgcggtaa
     8341 agtgcgccgt aatcaccggc accgttaccg catacagcag catcagtttt ttccgtttca
     8401 aaagcagggg caggctgctt aaagaaccgg tattcacgct cggcaggcgc ggcaggcttt
     8461 tggcaagcac tgccatcacc gccgccgaac acaggccgat cagcagaaaa ctcgcctgcc
     8521 agcccaaata ttgtccgacc atacgcccga gcggaatccc cgccgccatc gccatcaccg
     8581 tccccgtgct gagcagcccc aatgcctgat tcccttttcc gacaggggcg atgcgtaccg
     8641 ccagcgaagc cgtaatggac cagaacaccg cgtgcgtcag cacaatcccc acgcggcttg
     8701 cgagtaggat ttcaaaacgc cacgaggcaa acgacaggat gtggctgaca gtaatacagc
     8761 gcaaacagga ccagcagcag gccgcgccgt tccataattg cgcgtcagca gcatcagcgg
     8821 cagcgaagtc agcgcgacaa tccacgcata aaccgtaatc atcacacccg tttcggtcgc
     8881 cgccatgccg aagcttcgtc cgatgtcgct caaaagcgcg atggggatgt attcggccgt
     8941 gttgaaaata aatgcgccga ttgccaaggc aacgatgctc aaccaaggtt tgtgcgaagc
     9001 gttcatctca attccttata tgtcgcaccc cgccaaaagg gggcgcatta tggtgaatta
     9061 acaaaaaccg gtacggcgtt gccccgcctt agctcaaagg gaacgattcc ctaaggtgct
     9121 gaagcaccag gcgaaccggt tccgtaccat ttgtactgcc tgcggcccgc cgccttgtcc
     9181 tgatttttgt taattcacta tacttttctt gtctgccgga cggcaaaatc caaatcaggg
     9241 ggaagcagcc gcctcccgtt cggaggaaca ctcgggacgc tgctttgaaa atcgttccat
     9301 atgttgaaac attgccgcct cccgattggg caaggttgcc attatgtcgc aagcatccgt
     9361 gccgcaccgt ttccgcgttt gcccaagttc acgctccgac ttacaataac gcccgtcaga
     9421 ttgcagtacc aacgaaagga aaaatcgtgg aaaccctcct cctcgacatc gtcggcatga
     9481 gctgcggcgg ctgcgtcaaa agcgttaccc ggatattaga aagcgtaaaa ggcgtggcaa
     9541 gcgtcgaagt cagccttgaa aacaaaagtg cgaccgtcgg atacgacccc gcgcaaaccg
     9601 cagcggaagc actaatcgaa gccgtagaag acggcggcta tgatgcggcg ttgaaataaa
     9661 gcggcaaaaa tgccgtctga agcctttgcg tttccccgat gccgtctgaa gcacgctccg
     9721 cgccttcggg cggcatttga tttagttgaa cgggcaggat gaattggtta aacttgcggg
     9781 caatagtgcc ttcagacaaa caaaatatgc cgaacaaaaa gaaaaaagcc gcctttgcgc
     9841 gctgcaacgg agaacggtgt gccgggcgtg tccgacatca aaaattcata tgatgatttg
     9901 atgtacgaat ccaaagcatt ttcccaaacc gccatcaacg ccttggaggc atgcgcccgc
     9961 atgatgggtt tgaagcctac ggcagccgca aaagccaagg tcttggagct gggctgttcg
    10021 atgggcagaa acatcatcac gcaggcactt tattacccgg atgcggaatt tgtcggtatc
    10081 gacttgtccg gcaggcaggt tgcgcagggc aacgccatca ttgaaaaaat gggcttggaa
    10141 aatgtgcgtc tggaagaaaa agatattttg accgtcgatg aatcattcgg gaagttcgac
    10201 tatatcatcg tccacggcat ttggtcgcgg gtgcccgacg cagttaaaga caaaatcttt
    10261 tcgatttgcc ggaacaacct gaccgaatac ggcattgcct atatttcata caatgtttac
    10321 cccggttgga agcggcagga gcagttgcgc gatattatgc agtttgccgg cagggatgcg
    10381 cttggagaac ccttggaagc aaggacgcgg aaaggcttgg atgcgatcaa ggcgctggcg
    10441 gaaattttgg aaaacgacaa gggcttgggc ggcggcaaac ttccggcgat tcaaaaaata
    10501 ttgaatcaca atacttatta tgtcgcacac gaatatatgg aaatattcaa caacccgatt
    10561 tacgttaacg gtttcattga atgggcaaac cgccaccggc tggcgtatat cggggatacc
    10621 gatttgcatg tgtcttttgt ttcttggatg gcggagcata cgcgggagcg gattctggca
    10681 ttggcagggg gtgattatat tgccaaagaa ttttacagcg atattttatc cgaccgccaa
    10741 ttccaccgtt cgcttttatg ccgtgaggaa gtcggggata ctgtcaggcg tgatgagtcg
    10801 gttgccgtcg aagtgataga aagtttgaat ttccgcccgg caagagggga aacaatcaac
    10861 tttgatgaaa acgataccct gctttcgggc atacgcgatg tgatgaaaac cggagaggcg
    10921 tttaaaacgg aagatgttgc ggaaaatctt gcccgccgat ttcccggtct ggaatttgac
    10981 cgcatgaaaa tcaattccca gcttttattg caaaccattc tcgggcgttt ttctgtttca
    11041 tcagacaatg cgggcaaacc attttttgaa gaccataaaa cctatgtgcc ggcgcgcttt
    11101 acaaactatg ccgccgcctt tgtggaacac ggtgcgggag cgtttgtccg gcctgccaac
    11161 cgttacaacg aaagcacgcc ctcattcgga tacgggcatt tgtacattat gcggcaattg
    11221 tcgcggccga cgagcaaaca ggcattgatt gaaacggttg ccgaaaactt gaacatcgtc
    11281 agcgccacgc ccgacggttt gacattccat ccgcctgccg aagtgtatgt ggaagaaata
    11341 ttggcagact tggcagacag gcattttctc gtttcggcgg attgacgggc aagtcccgac
    11401 ggcaatccgt ccgatatatt ttcagacagg aaagacacac actgcgaaaa acggtacacg
    11461 acacatatga accagacatt taccttgccc gatacgcgcc cgtatcccca aaatccgatt
    11521 aaaaaccacc tgctgctcaa tgcctaccag ttggcgcata attcttccca ggcttcgcgc
    11581 aaactctcgt ccgggcagct tcaaaccgaa atcaggggga tgcttgagca aaaccactat
    11641 atcaaccttt ccctcgcgct gacgatgtcg cccgatgccg gaacttatgc cgcgctgctt
    11701 tccagtgtga acgcggtact cgattgcgag aaagaaggcg aagtgcagtg gttcgccctg
    11761 ccggtcgtgc tggtgtcagg ctgcaagaaa gaacgggcaa tcgagatgaa gctgccgacg
    11821 gaggcattgt ttgcctgcct gcaaaactat ccgcacctgc gcgcgttgac gcaagagaca
    11881 caatggctgc cttatcttgt gcattcttcc gatttgagtg cggtcgcgcc ggatgagtgg
    11941 tggcgtgcca aacaaaatac cgaagcggcg gcgcaacact tacgccgttt cgccccgcgc
    12001 cctttgctgt tgcccgaagg gcagtccgtc cacgtcgttt acgtgctggg tttcggcagc
    12061 ggcaaagttc aggcggcatt ggggcagaac cttcttcagg caggcttgcc cttaatgcag
    12121 gtatggcagg aaaatcttgc atcggaaggc attacgctgt ttgccaatcc gctttccccc
    12181 gataccccgg cgcgcgcgct ttcagacggc agccacacgc gccaacgtat ggcgatggat
    12241 gtttttgcgg caaacgcgat acgcgccgtc cggatgcagg gtccgcgcgt cggcgtggtc
    12301 gctgcggcaa aggcgggcgg acagattcta ttcggattta atgcgaccga cggcgcgttt
    12361 gaagtcgtgc cgcaggtgtt ttgctggcag ctttccttta ccgataacat tgccgtcatc
    12421 cagcagaatt tcctcgacct gatggcagaa tgccgtgtag aacacgttta cctgctgcac
    12481 aatcccttgg gcgaacagga aaacatcccg agctatgcgg aagcgttgaa acgggaaggg
    12541 cgcaatccgt ttttcagcgc atagtgattt gtagtagtga taggctttct catttctata
    12601 ataaatcaaa ataaagagca caacactttt tcattctgtg ttgtgccttg agtgaaacga
    12661 aaggatgaat tataaatatg aagattgtaa ttgcaccgga ttcgtttaag gaaagcttga
    12721 cagctcaaca ggtagctgaa gcaataaaaa gaggcttcca acaatcgata gcagatgtgg
    12781 aatgtctcct ctgtcctgtc ggtgatgggg gagaaggcac tgtagatgct atccgacatt
    12841 ctcttgacct agaagaaaaa tgtctccaag tgacaggacc ttttggacaa aaagaagtca
    12901 tgcgctattt tcaaaaagaa caactagccc tattcgaagt tgctgatttg gttggtcttg
    12961 gaaaaatccc gctagagaaa cgaaatccat tacaaatcca aactcgtggt attggagaat
    13021 tgattcgcca cctcattagt caagaaatta aagaaatcta tattggcgtt ggcggtacgg
    13081 ccggtaatga tggaggtatt gggattgctg ctggtttagg ttatcaattt tatgatgagg
    13141 atggaaatgc cttacccgct tgcggtcaat ccttactaaa cccagcttct gtttcaatag
    13201 aaaatcgcta tgaaattcct gaagatgttc acattcgtat tttagcagat gttgtgagtc
    13261 ccttatgtgg acaccaaggt gcgacctata cgtttggcaa gcaaaaaggg ctggattcta
    13321 ctatgtttga ggccgtagat caggcaatac aagattttta tgaaaaagtc ccccctgcaa
    13381 cattaaaact taaaggagca ggagctggtg gaggcatcgc tggtggtttg tgtgcctttg
    13441 ctcaggcaag tatcgtatct ggaattgaca cctgcctgga cttgattgac tttgataaga
    13501 aagtgtcaga tgttgacttg gttatcgttg gtgaaggaag actagatcgt caaagtttag
    13561 cagggaaagc gcctattggt gtagcaaaaa gaacccctgt cggagttcct gttgtcgcta
    13621 tttgcggcag tttcgctgaa gatttgcctt ccctaccatt tgaaaatatc caagccgcct
    13681 tttctatttt ggagaaaagt gaacctttag aagatagttt gaaaaatgcc agtctttatt
    13741 tggagcatac ggcttctaat attggatatt tattaaatat gcctaagatt tagccaagcc
    13801 atttcttcca gatggatgtt ttggcaggtt cttccttatg cggttacgat taaccggccg
    13861 atgccgtctg aaagggtttc cgcttcaggc ggcatcgcgt tggaacaggg atgggatatg
    13921 aaaaaaccga aaatcctttt tgtctgcctc ggcaacatct gccgttcgcc gatggcggaa
    13981 tacattttgc gccgccgtgc cgccgaagcg ggcattcccc tcgaaacgga cagcgcaggg
    14041 acatcgggct ggcacgacgg cgaggatatg caccgtgaaa cggcaaagat attgaaaaaa
    14101 tacggcattg acgcttcagg ctttaccagc cgcaaaatcc gccaaagcga tgcgacggcg
    14161 tttgactaca tcatcgctat ggacggcaag aatttgtccg aattggaaaa aactttcggc
    14221 aggcggccgg aaaaaatatt caagctgacc gacctgatac ccgaaagcgg ttacgaccat
    14281 gtccccgatc cgtggtacat gggtgatttt gaagaaacat acaggcttgc ggatgcaggc
    14341 tgtcgggcat tattggaaaa gatttccaaa taaagcaatt gaatacaaac acaaatataa
    14401 aaccgcctcc tgtcgtatcg gtcgttcgga cggcataaac agggaattta tgaaaacaaa
    14461 tttcaaacag aaaattatcg aacaggcacg cagagaggac ttgcaggtaa ccgctttgcg
    14521 cgagcaggta ttagatattg tcttgcagca aagcggcgtg attaaagcct acaatgtttt
    14581 gtcacagatg cagcagcaga gcgaaggcgt gcttgcaccg cctaccgcct accgtgccct
    14641 tgatttttgg gcggatcagg gcgttttaca caaagtggcg gcggtcaacg gctatatttt
    14701 gtgcagccac gcgcagcacg agtgcaacga ccattgccac gaccacgaag aagccgaagc
    14761 gcaccacagc gcgtttattt tggtctgcac cgaatgcggc gcggcggacg agcaaaccct
    14821 cagccacgag tgggcggcac tgcgtgcagg cgttgccgaa agcggttttg cgctgaaaga
    14881 agaacacgtt gttttaactg gaatctgtaa aaaatgtcag aagtgaaaaa aaccaaagtc
    14941 cacctgattt caggttttct gggaacaggc aaaaccaccg cgctcaaaag cctgatggcg
    15001 caaaaagacc cgaacgaaaa atgggtcatc atcgtcaacg agttcggcga aatcggcatt
    15061 gacggcgcgg tattgagcga caacggcatc cctgtggcag aaatcgccgg cggctgttta
    15121 tgctgcaccg ccggcccgca aatgggcgta accgtgcaga aaatgctgcg cgacgccaaa
    15181 cccgaccgcc tgatgattga ggcaagcgga ctggcgcacg ccgccagcgt catcgacgaa
    15241 ttgaaagcca aacctctgga cagtcttttg gaaatcggcg ccgtctttac cgtcgtcgat
    15301 ccgcgccagt tcatcaatcc cgattacgcg caacaggcgt tgtataaaga ccaaatcggc
    15361 atttgcgacg tattggccgc cggcaaaacc gatttatgca cccccgaaca gcttgccgaa
    15421 tttcatgaca aagcggcaaa actgttccca cccaaagcca aagtggtcga agtccaaaac
    15481 gcacaactcg atatccaatg gctcgatatt cccgtagttg aaaaatcacg ctaccgcctc
    15541 aaagccctgc cggacaacac catgggcttc cagtcgcaag gtttcacatt ccccgccgga
    15601 cgcgatttcg acggcgaaaa attgaccaac ttcttcaatg atttgcccaa aatgaccgaa
    15661 ggactcgtcc gcgccaaagg cgtgttccaa gtattgggaa cgtgggtgtg gctcaactgg
    15721 gtggacgggc agtggggcgc gaaccaagtg tcttggcggc gcgattcgcg tttcgagctg
    15781 attgccaaat cgtttgacgc ggatttaatc gaacaaaaac ttaaagacgc attggaatag
    15841 cgttcacgcg ctttcagacg gcatatgaaa tgaaaatgcc gtctgaaggc tttaggagga
    15901 cgggatgaaa cccaaattca aaaccgtttt aaccgcgctg cttttggcgg tttgcctgcc
    15961 gtctatggcg gcaacccgcg tcctgatgga aaccgatatg ggcaatatcc gtttggtttt
    16021 ggacgaatcc aaagcctcca aaaccgttgc caatttcgtg cgctatgccc gaaaaggctt
    16081 ttacgacaac acgattttcc accgcgtcat cggcggcttc gtcatccaag gcggcggatt
    16141 gaccgaggac ttggtgcaaa aggcaaccga taaggccgtt gccaacgaat ccggcaacgg
    16201 cttgaaaaac accgtcggca ctatcgcaat ggcgcggacg gcagaccccg attccgccgc
    16261 cgcccaattc tttatcaatc tggcggacaa cggctcgctc gactacaaaa acggacaata
    16321 cggctacacc gttttcggca gggtcgaaag cggaatggac accgtttcca aaatcgcccg
    16381 cgtcaaaacc gccacgctcg gcctttatca aaacgtaccc gtacagcccg tcaaaatccg
    16441 tcgcgttgtt gtcgggcagt aacacgcaga cagacgttca gacggcgtcg cccgtttccc
    16501 aaaaaacgcc
//
LOCUS       DAWXHA010000049        16487 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.049, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000049 DAWXHA010000000
VERSION     DAWXHA010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16487
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.049"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(52..390)
                     /locus_tag="AABD07_001161"
     CDS             complement(52..390)
                     /locus_tag="AABD07_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HFB2355705.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERSDAAV"
     gene            541..4497
                     /gene="purL"
                     /locus_tag="AABD07_001162"
     CDS             541..4497
                     /gene="purL"
                     /locus_tag="AABD07_001162"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HFB2355706.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPEAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKQQWAALLHDRMTESVLPDFQTASKLFHHLKSET
                     FSTVDVLGGGKEALVKANTETGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIKGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDQNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFELREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFSNNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHAGDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPAVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVKDVRKTVTPELKNVEGSVLLFIDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDAGRLKAFYSVIQQLVAEDKLLAYHDRSDGGLFATLAEMAFAARCGISADIDCLMD
                     KFLPIHLPDFQGDPAEDLSDELYNHAAIKILFNEELGAVIQIRQKDRDYVDAAFETAG
                     LTDAVSRIGSPDFDNEFISFFGYGYFLEQNRADLQRAWQETSHAIQRLRDNPACADSE
                     FALIGDNERSALFADVKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFTRA
                     GFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQFA
                     AFFADPNTLTLGVCNGCQMVSNLAEIIPGAETWPKFKRNLSEQFEARLNMVHVPKSAS
                     LILNEMQDSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNPNG
                     SPQGIAGITNADGRVTIMMPHPERVYRAAQMSRKPEGWTELSGWYRLFAGARKALG"
     gene            complement(4568..5779)
                     /locus_tag="AABD07_001163"
     CDS             complement(4568..5779)
                     /locus_tag="AABD07_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase family
                     protein"
                     /protein_id="HFB2355707.1"
                     /translation="MLFTPFTFQNGKTAKNRIFKSAMEEQLAQNDQPSEKLVRLYGAW
                     AEGGAGVLVTGNVMVAESGKGSINDVLISDDRALEMLKKWAKARMQNDTLLIMQINHA
                     GKQSPAVVNKTPLAPSAVPLVGMNGFINPPRELSADEINGLIQQFVQTAKIAEQAGFS
                     GVQIYAVHGYLISQFLSPHHNRRQDQWGGSLENRMRFLLETYTAIRAAAGKDFLVGVK
                     LNSADFQKGGFDESESVQVVQKLSEMGIDFIEVSGGNYESPQMLAAKDSTRKREAFFI
                     DYAEKARAASQAPLIITGGFRSQTAMEDALSSGHLDLVGIARPFALVPDLANKMQNRT
                     YQTVQADRIQTGVAFVDKKAGAMLEMNWYMTQMDLIGQGKQSNPKLSAWKVLLKTLRE
                     NGKAGLSTGRA"
     gene            complement(5853..6164)
                     /locus_tag="AABD07_001164"
     CDS             complement(5853..6164)
                     /locus_tag="AABD07_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HFB2355708.1"
                     /translation="MPQQTMNLMRECIPIFTVLSDENRHQILHVLWKHGRMNVNELTE
                     HLHLSRPAVSHHLKIMLQAGAVAVEQVGKERFYSIAMADAVARLKQLADLMAQNCPLS
                     K"
     gene            6396..7148
                     /gene="gloB"
                     /locus_tag="AABD07_001165"
     CDS             6396..7148
                     /gene="gloB"
                     /locus_tag="AABD07_001165"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HFB2355709.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTRFTFGNGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTVEQLYDSFQRFNQLPEGT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAERTPTLPVTLAHERRVNPFLRTEIP
                     AVRQRAEALVGKTLNSGLEVFAALRELKNAYR"
     gene            7382..8836
                     /gene="mgtE"
                     /locus_tag="AABD07_001166"
     CDS             7382..8836
                     /gene="mgtE"
                     /locus_tag="AABD07_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HFB2355710.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLAELHPADVADVLESLPPRERNIVWLLVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAKDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITIDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTDMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMVAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLSLATLFLL"
     gene            complement(8922..9830)
                     /gene="hslO"
                     /locus_tag="AABD07_001167"
     CDS             complement(8922..9830)
                     /gene="hslO"
                     /locus_tag="AABD07_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HFB2355711.1"
                     /translation="MNQTAINRADARTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRCALGELLAAGVLLSGNLKNEGTLIVQVQGQGKLKMLVAEATSDRTVRATARWDET
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGGSIAQMLVNYMKRSEQLDT
                     HIALSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAEELAELDAQHVLYRLFH
                     ETPPRVFEPETFESSCTCSRGKVSDMLLMLGGEEVGGVVAEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            10075..10656
                     /locus_tag="AABD07_001168"
     CDS             10075..10656
                     /locus_tag="AABD07_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFB2355712.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPVNRAPARRAGNADELIGSAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGAPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            10675..10893
                     /locus_tag="AABD07_001169"
     CDS             10675..10893
                     /locus_tag="AABD07_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355713.1"
                     /translation="MSMPEMPKWYGDDGQIVSCTEKVKVMAENMSELYQTAQDAFEDA
                     LLMGCGERQLRAYLLALIEGLENPYRKV"
     gene            11038..11382
                     /locus_tag="AABD07_001170"
     CDS             11038..11382
                     /locus_tag="AABD07_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HFB2355714.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            11382..12074
                     /locus_tag="AABD07_001171"
     CDS             11382..12074
                     /locus_tag="AABD07_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HFB2355715.1"
                     /translation="MSEILRQPGILLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILGIDYAVYHNAAQFIDFRLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLPLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGMGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            12141..13361
                     /gene="argJ"
                     /locus_tag="AABD07_001172"
     CDS             12141..13361
                     /gene="argJ"
                     /locus_tag="AABD07_001172"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HFB2355716.1"
                     /translation="MAVNLTEKTTEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALVINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDQHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTCDEARQAAYAAARSPLVKTAFFASDPNLGRLLAAIGYADVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKDEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            13421..14830
                     /locus_tag="AABD07_001173"
     CDS             13421..14830
                     /locus_tag="AABD07_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HFB2355717.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWIALPPGLPVIVWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLAAGFI
                     QVAIQGNNPYFSGFNGGVLENILMWIVAAGLVCGAAGGIFARMLHRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPVGLAAAKWLAT
                     VFSYWAGIPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRRRVLQETAAQTG
                     NAPARPQAANSKTGMPSEN"
     gene            15018..16409
                     /gene="hrpA"
                     /locus_tag="AABD07_001174"
     CDS             15018..16409
                     /gene="hrpA"
                     /locus_tag="AABD07_001174"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HFB2355718.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKIEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLEEIKKTVAENQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKCRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNSRPEFTDPEIVRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEVV"
BASE COUNT         3699 a         4995 c         4290 g         3503 t
ORIGIN      
        1 aaaacaaatg ccgtctgaaa gcctttcaga cggcatttcc attccaaacg ctcaaaccgc
       61 cgcgtccgaa cgttcgcccg tgcggatacg gattgcctcc tcgaccggca gcacaaaaat
      121 cttgccgtcg ccgattttgc ccgaacgcgc cacctcgaca atcacgtcaa tcgcgcgttc
      181 cacggcatca tccgccaaca ccaactcgat tttgaccttg ggcaggaaat cgacggcgta
      241 ttccgcaccg cgatagattt ccgtatgccc cttctgcctg ccgaaccctt tgacctcgct
      301 gacggtcatg cccgtaatgc cgatttccgt caacgcctcg cgcacgtcgt cgagcttgaa
      361 cggtttgaca atcgcctcga tttttttcat aaaatttcct ttgaacaaac aatacaaaca
      421 catccgaaaa acgggaaccc ccgtcagatt gtcaacattt taaaccaaaa tacccaagca
      481 atacagcccc cgttgcgcat ataatgacag cttttccaac cgcatttgag agccgaatcc
      541 atgtctgttg ttttgccctt gcgcggcgtt accgcccttt ccgatttccg tgtcgaaaaa
      601 ctcttgcaaa aagccgccgc actcggcctg cccgaagtca aattaagcag cgaattttgg
      661 tatttcgccg gcagcgagaa agcacttgat gccgcgactg tcgaaaaact gcaagccttg
      721 ttggcggcgc aaagcgttga acaaacgccc gaagcgcgcg agggtttgca tttgtttttg
      781 gtaacgcccc gtttgggtac gatttcgccg tgggcttcca aggcgaccaa tatcgcggaa
      841 aactgcggtt tggcaggcat cgaacgcatc gagcgcggta tggcggtgtg gctggaaggt
      901 gcgcttaccg atgaacagaa acagcaatgg gcggcgttgc tgcacgaccg catgaccgaa
      961 tccgtgctgc ccgattttca gacggcatcc aaattattcc accatctcaa atccgaaacc
     1021 ttctccaccg tcgatgtttt gggcggcggt aaagaggctt tggtcaaagc caataccgaa
     1081 acgggtttgg cactctccgc cgacgaaatc gattatctgg ttgaaaacta tcaggctttg
     1141 cagcgcaatc cgtccgatgt ggagctgatg atgttcgcgc aggcaaacag cgaacactgc
     1201 cgccacaaaa tcttcaacgc cgatttcatc ctcaacggcg aaaaacaacc gaaatccctg
     1261 ttcggcatga tacgcgacac gcacaacgcg catcccgaag gtacggtcgt cgcctataaa
     1321 gacaattcgt ccgtgatcaa aggcgcgaaa atcgagcgtt tctatccgaa tgcagcggaa
     1381 aaccaaggct accgtttcca cgaggaagac acccacatca tcatgaaagt ggaaacgcac
     1441 aaccacccga ccgccatcgc gccgtttgcg ggcgcggcaa caggcgcggg cggcgaaatc
     1501 cgcgacgaag gtgcgacggg caaaggttcg cgtccgaaag cgggcttgac cggctttacc
     1561 gtgtccaacc tcaacatccc cgacctcaaa cagccgtggg aacaagacta cggcaagccg
     1621 gaacacattt cctcgccgtt ggacatcatg attgaaggcc cgattggcgg tgcggcgttc
     1681 aacaacgaat tcggccgccc gaacctcttg ggctacttcc gcacctttga agaaaaattt
     1741 gacggtcagg ttcgcggcta ccacaaaccg attatgattg ccggcggttt gggcagcatt
     1801 caggcgcagc agacgcacaa agacgaaatc cccgaaggcg cactgctgat ccaactgggc
     1861 ggcccgggca tgctcatcgg cttgggcggc ggcgcggctt cttcgatgga taccggtaca
     1921 aatgatgcgt ctttggactt caactccgta caacgcggca accctgaaat cgaacgccgc
     1981 gcgcaggaag tcatcgaccg ctgctggcag ctcggcgacc aaaacccgat tatctccatc
     2041 cacgacgtgg gcgcgggcgg cttgtccaac gctttccctg aattggtcaa cgatgccgga
     2101 cgcggcgcgg tattcgagct gcgcgaagtg ccgttggaag aacacggttt aacgcctttg
     2161 caaatctggt gtaacgaatc gcaagagcgt tatgtcttgt cgattttgga aaaagatttg
     2221 gacaccttcc gcgccatctg cgaacgcgaa cgctgcccgt ttgccgtagt cggcacggcg
     2281 accgacgacg gtcatttgaa agtgcgcgac gatttgttct ccaacaaccc cgtcgatttg
     2341 ccgctgaacg tcttgctcgg caaaccgccc aaaaccacgc gtaccgacaa aacggttacg
     2401 ccgtccaaaa aaccgtttca cgcgggcgat atcgacatca ccgaagccgc ctaccgcgtt
     2461 ttgcgcctgc ctgccgtagc cgccaaaaac ttcctgatta ccatcggcga ccgcagcgtc
     2521 ggcggcatga cccaccgcga ccaaatggtc ggcaaatacc aaacccccgt agccgactgc
     2581 gccgttacca tgatgggctt caacacctat cgcggcgaag cgatgtctat gggcgaaaaa
     2641 ccggccgtcg ccctgtttga cgcgcccgcc tcgggcagaa tgtgcgtcgg cgaagccatc
     2701 accaacatcg cggcagtcaa catcggcgac atcggcaaca tcaaactttc cgccaactgg
     2761 atggcggcgt gcggcaacga aggcgaagac gaaaaactct accgcaccgt cgaagccgtt
     2821 tctaaagcct gccaggcatt ggatttgagc attcccgtag gtaaagacag cctgtcgatg
     2881 aaaaccgtgt ggcaggacgg cgaagagaaa aaatccgtgg tttcgccgtt gagcctgatt
     2941 atttccgcgt tcgcgcctgt taaagacgtg cgaaaaaccg ttacgcccga attgaaaaac
     3001 gtcgaaggca gcgtattgct gtttatcgat ttgggcttcg gcaaagcgcg catgggcggc
     3061 tcggcgttcg gtcaggtgta caacaacatg agcggcgacg cgcccgattt ggacgatgca
     3121 ggccgtctga aagcgtttta cagcgtaatt caacagcttg tcgccgaaga caaacttttg
     3181 gcgtatcacg accgcagcga cggcggtttg tttgcgacgc tggcggaaat ggcgtttgcg
     3241 gcacggtgcg gtattagtgc cgatatagat tgcctgatgg ataaattcct gccgattcat
     3301 ctcccggatt ttcaaggcga ccctgccgaa gacttatctg acgaacttta taatcatgcc
     3361 gccattaaaa tcttattcaa tgaagaatta ggcgcggtta tccaaatccg ccaaaaagat
     3421 agggattatg ttgatgcggc atttgaaacg gccggcttaa ccgatgcggt cagccggatt
     3481 ggctctcctg attttgacaa tgagtttatt tctttctttg gttacggtta tttcttggaa
     3541 caaaaccgcg ccgacctgca acgcgcgtgg caggaaacca gccacgccat ccaacgcctg
     3601 cgcgacaacc ctgcctgcgc cgacagcgag ttcgccctga ttggcgacaa cgaacgcagc
     3661 gcattgtttg ccgacgtgaa gttcgacgtg aacgaagaca tcgccgcgcc gtttatcaac
     3721 agtggcgcga aacctaaaat cgccatcctg cgcgaacagg gcgtaaacgg gcaaatcgaa
     3781 atggccgccg ccttcacccg cgccggattc gatgcctacg acgtgcatat gtccgacctg
     3841 atggctggcc gcttccgcct tgccgacttc aaaatgctgg cggcgtgcgg cggcttcagc
     3901 tacggcgacg tactcggcgc gggtgaaggc tgggcgaaat ccatcctgtt ccaccctgcc
     3961 ttgcgcgacc aattcgccgc cttctttgcc gatccgaaca cgctgacatt gggcgtgtgc
     4021 aacggctgcc aaatggtcag caaccttgcc gaaattatcc cgggcgcaga aacatggccg
     4081 aagttcaaac gcaacctgag cgagcagttt gaagcgcgcc tgaatatggt tcacgtcccc
     4141 aaatcagcgt cgctgatttt gaacgaaatg caagactcca gcctgcctgt cgtggtcagc
     4201 cacggcgaag gccgcgccga cttcgcgctt cacggcggca atatttccgc cgatttgggc
     4261 atcgcgctgc aatatgtgga cggtcaaaac caggttaccc aaacctatcc gctcaacccc
     4321 aacggctcgc cgcagggcat cgccggcatt accaacgccg acggccgcgt taccattatg
     4381 atgccccacc ccgaacgcgt gtaccgtgcc gcacaaatga gccggaaacc ggaaggctgg
     4441 acggaactgt ccggctggta ccgcctcttt gccggcgcac gtaaagcctt gggctaaacc
     4501 gtctgcccaa acaaatgccg tctgaaaaag gttttgaaac ccgtttcaga cggcattttg
     4561 accattctca agccctgccg gtactcaatc ccgctttacc gttttcccgc aaagttttca
     4621 gcaatacttt ccacgccgac aatttagggt tggactgttt tccttgtccg atcaaatcca
     4681 tttgcgtcat ataccagttc atttctaaca ttgcacccgc ttttttatca acaaatgcta
     4741 cgccagtttg gatgcggtct gcttgtacgg tttggtaagt tctgttttgc attttgttcg
     4801 ccaaatcagg gactaaggca aacgggcggg ctatgccgac caaatccaaa tgaccgctgg
     4861 ataaggcatc ttccatggcg gtttgcgaac ggaatccgcc ggtgataatc agcggggctt
     4921 ggctggctgc acgggctttt tcggcgtaat cgatgaagaa ggcttcgcgt ttgcgggtgc
     4981 tgtctttggc ggcgagcatt tgcgggcttt cgtagttgcc accggaaact tcaataaaat
     5041 caatgcccat ttccgacagt ttttgcacca cctgcaccga ttcgctttcg tcaaatccgc
     5101 ctttttggaa atctgccgaa ttgagtttta cgcccaccaa gaaatctttg cccgcggcag
     5161 cgcgaatagc ggtgtaggtt tccaaaagga agcgcatacg gttttccaaa ctgccgcccc
     5221 attggtcttg gcggcggttg tggtgcggcg agaggaattg gctgatgaga taaccgtgta
     5281 cggcgtaaat ttgtacgcct gaaaagcctg cctgttcggc aattttggca gtttgtacga
     5341 attgctgaat cagcccgttg atttcatcgg cactcaattc gcgcggcgga ttgataaagc
     5401 cattcatgcc caccagcggc acggcgctcg gtgcaagcgg tgttttattg accaccgcag
     5461 gcgactgttt gcccgcatga ttgatttgca tgatgagcag cgtgtcgttt tgcatgcggg
     5521 ctttcgccca ttttttcagc atttcaaggg cgcggtcgtc tgaaatcaac acatcgttta
     5581 tcgaaccttt gccgctttca gccaccatca cattgcccgt caccaaaacg cctgcgccgc
     5641 cttctgccca agcgccgtac aggcggacaa gtttttcaga cggctggtcg ttttgggcaa
     5701 gttgctcttc catggcggat ttgaagatac ggtttttggc ggttttgccg ttttgaaaag
     5761 tgaatggcgt gaataacatg atcgttcctt taagttgata agtttaaaaa tgtaaacgta
     5821 tttgggtaaa aataaagggc caacggataa ccctattttg aaagcgggca attttgagcc
     5881 atcaaatcgg caagctgttt caatctcgcc accgcatccg ccatggcaat actgtaaaac
     5941 cgctctttgc cgacctgctc caccgccacc gctccggctt gcagcatgat ttttaaatgg
     6001 tgcgacacag cagggcgcga cagatgcaga tgctcggtca gctcattcac attcatccta
     6061 ccgtgtttcc acaatacatg caggatctga tggcggtttt catcgctcaa tacggtaaaa
     6121 atgggtatgc actcgcgcat taaattcatg gtttgttgcg gcatattcga tctattgagt
     6181 ttatatattt aaaaattcga acgtatttta gagggaaggt cggcagttat caaaggcagt
     6241 ttggtttgca gtttggcaat atattgttgc tgaaaggttt ttataagaaa aaatgccgcc
     6301 tgaaacagca tgatggcgtt tgctagggtt ccgctgtata ttaacgcctt tcggatacac
     6361 ctttcagacg gcatccgaac catcaaggaa cactcatgaa aattaccccc gtcaaagccc
     6421 tgaccgacaa ctacatctgg atgatacagc acggcaacca tgccgtctgc gtcgatcctt
     6481 ccgaaccctc gcccgtcttg gaattcctcg tacgcaaccg actcatgctc gcccaaacct
     6541 gggtaacgca cccccatccc gaccacgaag gcggtgcggc ggcactctgg cgcggctaca
     6601 tggaatcgcc cgtttacggc gaatccgaca tcgaagccgc cacccacacc gtaaccgccg
     6661 gcacacgatt caccttcggc aacggtcagg ttaccgtttg ggcaacaccc ggccacacag
     6721 accgccacac cagctacctt ctcgaaactt cagacggcat acacgttttc tgcggcgaca
     6781 cccttttttc cgccggctgc ggacgcgtgt ttaccggcac ggtcgaacag ctttacgaca
     6841 gcttccaacg gttcaaccaa ttacccgaag gcaccctgtt ctatccggca cacgaataca
     6901 ccgccgccaa cctgcgtttc gccgcccata tcgagccgga caacgccgac attcagacgg
     6961 cattgaaggc ggcggaacgc acgcccaccc tgcccgttac cctcgcgcac gaacgccgcg
     7021 tcaacccgtt cttacggaca gaaatccccg ccgtccgcca acgtgccgaa gccctggtcg
     7081 gcaaaacgct gaacagcggt ttggaagtat tcgccgccct gcgcgaactg aaaaacgcct
     7141 accgctgacc tgccctccga aaaatgccgt ctgaaacccg cgtttcagac ggcatttgcg
     7201 ttaaaaatag taaaccgttt caaaagggag tagaatagtg ctgtttccaa tcccgtgcct
     7261 gatttttcgg gcttttatta tggaccttcc cagttcgttt ttactgaaca ccccttccga
     7321 ttccaaacga caataaccat cccgccggaa tgcctccccg cacacggcgg gcggagcatt
     7381 tatgagcatc gaacacactc ctccgacaca cgacggcgaa accggtcaaa accatgccga
     7441 acgcccttcc gccgatttcg accgtgtcca ctccctctgc gaaatcctcg aacctgcttt
     7501 tgaacaaatc gaaaacggca caccgctcga agatgcgccg ctgcgcgaca agctgaccga
     7561 gctgaccgtc ctcttggccg agttgcaccc tgccgacgtg gccgacgtct tggagtccct
     7621 gccgccgcgc gaacgcaata tcgtttggct tctggtcaaa cccgaagacg acggcgaagt
     7681 attgctggaa gtatccgacg cggtgcgaga aacgctgatc gagtcaatgg acaaggacga
     7741 attgttggcg gcggtcgatg atttggatgc ggacgaattg gcggagctgg cagacgattt
     7801 gccgcaccaa gtggtttatg aagccttaca gacgcgcgat gaggaagagc gcgcccaagt
     7861 caaggcggca atgtcgtatg aagacaacca agtcggtgcg attatggact tcgagttggt
     7921 cagcatccgc gccgatgtcg cctgcgaagt ggtgctgcgt tatctgcgcc gcttcgacag
     7981 cctgcccgac cataccgaca agatttttgt cgtcgatgaa aacgacgtgc tgcagggcgt
     8041 gctgcccatc cgcaaacttt tggtcgccga tcccgaagat ttggtggaaa acgtgatggc
     8101 gaaagatgtc gtgcgtttcc gcgccaagga cgacgtggaa gaagcggcgc aggcgtttga
     8161 acgctacgac ttggttaccg cgcccgtcgt tgatgaaaac aaaaagctca tcggcaggat
     8221 taccatcgac gagatggtgg acgtgatccg cgaagaatcc gaagcggata tgttgaacat
     8281 ggcaggtttg caggaagagg aagacctgtt cgcccccgtc ttggattccg tcaaaaaccg
     8341 ctggatgtgg ctcgccgtca acctctgcac cgccttcctc gccagccgcg tcatcggcgc
     8401 gtttgaaggc agtatcgaaa aaatcgtcgc actcgccgcg ctgatgccca tcgtcgccgg
     8461 catcggcggt aactcgggca accagacgat taccatgatt gtccgcgcga tggcgatggg
     8521 gcagctgacg gatatgcagg cgggaaggct gttgaaaaaa gaagtcggcg tcgccttggt
     8581 caacggcatt atttggggga cggtgatggg agcggtttcg tggctgcttt acggcagcct
     8641 cggcatcggt ttggtcatgg ttgccgcgat gacgctcaac ctcctgctgg cggcaacggt
     8701 cggcgtattg attcccgtgg taatggaaaa attcggacgc gatcccgcgc tgggcagctc
     8761 ggtgctgatt accgccgtta ccgactccgg cggcttcctc attttcttga gtctcgccac
     8821 cctgttcctg ctttaaatgc cgtcccgacc cgcgcaaaaa tgccgtctga agcagaagct
     8881 gcttcagacg gcattcgacc attcatcctt gttgctcaag attattggac ggtatgtcgg
     8941 ggcagccctt tggcaacgcc gaccacatcc tccccgaaca gcgcgttgac atcggtttca
     9001 tcaaacacgt atttgctgtg gcagaagtcg caatcgactt cgatgctgcc ttgttccgcc
     9061 accacgccgc cgacttcttc cccgcccagc atcaacagca tatcgctgac cttgccccga
     9121 gaacaggtac atgaggattc aaacgtttcc ggctcgaaca cgcgcggcgg cgtttcgtgg
     9181 aacaggcggt ataaaacgtg ttgcgcgtcc aattctgcca gctcctccgc cgtcaacgtg
     9241 cgcgccagcg tactgacgtg ttcccatgcc tcttcatcca acacctcttc aggcagacgc
     9301 tgcaccagca gcccgcccgc cgcttcatcg cttgcagaca gggcgatgtg cgtatcaagc
     9361 tgttcggaac gtttcatata gttcaccaac atttgcgcga tgctgccgcc ttccaaaggc
     9421 actacgccct gccagggttc gccgtctttg ggttgcagcg tcaatacgaa cacgccgttg
     9481 ccgcccaaaa ggtcgccgag gctttcgtca tcggctattt ctgcggtttc gtcccaccgc
     9541 gcggttgcac ggacggtacg gtcggaagtc gcttccgcaa ccagcatttt cagttttccc
     9601 tgcccctgaa cctgcacaat cagcgtgcct tcgtttttaa ggttgcccga cagcagaacg
     9661 ccggcagcca gtagctctcc caaggcgcag cggatggcgg cgggatagtt tttctgtttt
     9721 acaatgtgct gccacacgtt ttccaaacgg acgtgcagcc cgcgcacggg catatcgtcg
     9781 aagataaagc gggtacgcgc atcggcgcgg ttgatggcgg tttgattcat gattttctct
     9841 gactgattgt tcggatggcg gctatatggt tgcggtcggc gcgaaaacaa ggcggacggc
     9901 ggatgcgctt cccaaattct caataaatta tataaaaatc aacatattaa ctcaatctaa
     9961 caagccgttt tttgccaaac agccgttttt ttatatacaa tcaacaagat attttcgact
    10021 gatacagcat aacatcgcac ggcggcacga tgcctcctgc gcggaaacac cgatatggat
    10081 tcttttttca aaccggcagt ttgggcggtt ttgtggctga tgtttgccgt ccgccccgcc
    10141 cttgccgacg agttgaccaa cctgctcagc agccgcgagc agattctcag acagtttgcc
    10201 gaagacgaac agcccgtttt acccgtcaac cgagcccccg cccggcgggc gggcaatgcc
    10261 gacgaactca tcggcagcgc gatggggctt ttgggtattg cctaccgcta cggcggcaca
    10321 tcggtttcta ccggttttga ctgcagcgga ttcatgcagc acatcttcaa acgcgccatg
    10381 ggcatcaacc tgccgcgcac gtcggcggaa caggcgcgga tgggcgcacc cgttgcccga
    10441 agcgaattgc agcccgggga tatggtgttt ttccgcacgc tcggcggcag ccgcatttcc
    10501 catgtcggac tttatatcgg caacaaccgc ttcatccacg cgccgcgcac ggggaaaaat
    10561 atcgaaatca ccagcctgag ccacaaatat tggagcggca aatatgcgtt cgcccgccgg
    10621 gtcaagaaaa acgacccgtc acgctttctg aactgatttc ccaaggaata cgcaatgagt
    10681 atgcccgaaa tgcccaaatg gtacggcgat gacggacaga tcgtatcctg taccgaaaag
    10741 gtcaaagtaa tggccgaaaa catgtctgaa ctgtaccaaa cagcacagga tgcatttgaa
    10801 gacgcgctgc tgatgggttg cggcgaacgg cagttgcgcg cttacctgct cgcgctgatt
    10861 gaaggtttgg aaaatcccta ccgcaaagtc tgaacacgcc ccggttgctg cggcacggtt
    10921 tatccgtgcc gtttttgcgt ttgtgcgcgg cttcggcttt tcagacggca tatttgacgt
    10981 tatgattaaa cagttaacaa gatttatcac aacgccgtca aaagacagac acacaacatg
    11041 aacatcatcc gcgcgctcct catcatcctc ggctgcctcg ccgccggcga aaccgccgtt
    11101 ttcctagcag gcatcaaact gcccggcagc atcgtcggca tgggcgtgct gtttgcgctt
    11161 ttgcaggcgg gttgggtcaa aacgtcttgg ctgcaacagc ttaccgacgc gctgatggca
    11221 aacctgacgc tgttcctcgt gccgccctgc gtggcggtca tcagctattt ggatttgatt
    11281 gccgacgatt ggttttcgat actggtttcc gcctccgcca gcactttgtg cgtactgctg
    11341 gttacgggca aggttcaccg ctggatacgg agcattatct gatgagcgaa atcctcaggc
    11401 agcccggcat cctgcttttc ctcacgcttg ccgtgtacgc gcttgcgatt atcgtgcgca
    11461 cgcgcacggg caatatcttc tgcaaccccg tactcgtcag cactatcgtg ctgattgcct
    11521 acctgaaaat cctcggtatc gattatgcgg tgtaccacaa cgccgcgcaa ttcattgatt
    11581 ttcggctgaa acccgccgtc gtcgtgcttg ccgtgccgct ctaccaaaac cgccgtaaaa
    11641 tcttcaacca gtggctgccc gtcatcgttt cgcagcttgc gggcagcgtt acgggcattg
    11701 ttacggggat gtattttgcc aagtggctgg gcgcggaacg cgaagtcgtc ctcccgctcg
    11761 cgtccaaatc tgttaccaac cccatcgcca tcgaaatcac ccgctccatc ggcggcattc
    11821 ccgccattac cgccgccacc gtcatcattg ccggtctggt cggacagatt gccggttaca
    11881 aaatgttgaa gaacacggtc gtcatgccct cgtccgtggg tatgtcgctc ggcacggctt
    11941 cgcacgcgat gggcattgcc gcctcgctcg aacgcagccg ccgcatggcg gcatacgcgg
    12001 ggatggggct gacgttcaac ggcgtgctga ccgcgctgat tgcgccgctg cttatccccg
    12061 ttttggggtt ctgaacccgt ttcagacggc atttcaaccc atgccgtctg aacgccgaca
    12121 cactcgcaag gagaaccgtt atggctgtca acctgaccga aaaaaccacc gaacaactgc
    12181 ccgacatcga cggcattgcc ctctacaccg cccaagcagg cgtgaagaag cccgggcata
    12241 ccgacctgac actgattgcc gtagccgccg gcagcaccgt cggtgcagtc ttcacgacca
    12301 accgtttctg tgccgcgccc gtccacatcg ccaaatcgca ccttttcgac gaagacggcg
    12361 tgcgcgccct cgtcatcaac acgggcaacg ccaacgcggg tacgggcgca cagggcagaa
    12421 tcgatgcttt ggcagtgtgt gccgccgccg cccggcaaat cggctgcaaa ccgaaccagg
    12481 tgctgccctt ctccaccggc gtgattctcg aaccgctgcc cgcagacaaa atcatcgccg
    12541 ccctgcccaa aatgcagcct gccttctgga acgaagcggc acgcgccatc atgaccaccg
    12601 acaccgttcc caaagccgcc tcgcgcgaag gcaaggtcgg cgaccaacac accgtccgcg
    12661 ccacaggcat tgccaaaggc tcgggcatga ttcatcccaa tatggcgacc atgctcggtt
    12721 tcatcgccac cgatgccaaa gtttcccaac ccgtcctcca actgatgacg caggaaatcg
    12781 ccgacgaaac cttcaacacc atcaccgttg acggcgacac cagcaccaac gacagcttcg
    12841 tcatcatcgc caccggcaaa aacagccaaa gcgaaatcga caacatcgcc gacccgcgtt
    12901 acgcccaact caaagaattg ttgtgcagcc ttgcgctcga actcgcccaa gccatcgtcc
    12961 gcgacggcga gggcgcgacc aagttcatca ccgtccgcgt cgaaaacgcc aaaacctgcg
    13021 acgaagcccg ccaagccgcc tacgccgcgg cacgttcgcc gctggtcaaa accgcctttt
    13081 tcgcctccga ccccaacctc ggcaggctgc tcgccgccat cggttatgcc gacgttgccg
    13141 acctcgatac cgacctcgtg gaaatgtatc tcgacgatat tttggttgcc gaacacggcg
    13201 gacgcgccgc aagctacacc gaagcacaag ggcaggcggt gatgtcgaag gacgaaatca
    13261 ccgtccgcat caagctgcat cgcggacaag ccgccgccac cgtctatacc tgcgacctgt
    13321 cgcacggata cgtttccatc aacgccgact accgttcctg acccgacacg gcttcagacg
    13381 gcatacataa aatgccgtct gaaccgtcgg acaacatacc atgacctcca cattcccccg
    13441 ccgcctcgcc cgcaaaatcc gccaaacccg ccgcctgtcg cgcaaaagca tcgcctttct
    13501 gttccttctg gcaggttcgg cactcgtcgc cctgaccgca ctgttttttg cccatcttgc
    13561 cgattttgcg ctggaactga acgccaaact ggttcaacaa tacccgtggt tcgcatggat
    13621 tgccctgccg ccgggactgc ccgtcatcgt ctggctcaca cgcaaattcg cccccttcac
    13681 cgccggcagc ggcatccctc aagtcatcgc ctcactgtcg ctgccctacg gcgcacaaaa
    13741 aacgcggctg atacgcctcg ggcaaacgct gctgaagatt ccgctgacct ttttgggtat
    13801 gctgttcggc gcgtccatcg gacgcgaagg cccgtccgtg caggtcggcg cggcagtaat
    13861 gggcgcgtgg ggcgcgtggt gcaaaaaaca cggtttggcg tttaagggta tgcaggaaaa
    13921 cgatttgatg gcggcgggcg cggcgggcgg tttggcagca gcgttcaacg cgccgctggc
    13981 gggcgtgatt ttcgccattg aggaactggg gcgcggcatc atgctgcgct gggagcggca
    14041 gattctgctc ggcgtactcg ccgccggttt catacaggtc gccattcagg gcaacaaccc
    14101 gtatttttcg ggtttcaacg gcggcgtttt ggaaaatatt ttgatgtgga tcgtggcggc
    14161 ggggctggtt tgcggcgcgg ctggcggcat atttgcccgt atgctccatc gcggtgcggc
    14221 ggcgtttgca ccgcgcaaga tacgcggctt catccgcaac cgtccgctgc tgctggcggc
    14281 actgatgggg ctgctgctcg ccctgctcgg cacgttctac caaggcaaaa cctacggcac
    14341 cggctaccac gaagccgccc aagccctgca cggcatctac gaagcccccg tcggactcgc
    14401 cgccgccaaa tggctcgcca ccgtattcag ctattgggca ggcatcccgg gcggcatttt
    14461 cactccctcg ctgaccatag gtgcggtttt gggcgagcat atcgccgcca tcgccgacat
    14521 atcgcagggt gcaaacatca tcgtcctcat ctgcatggcg gcatttttag cgggcgcgac
    14581 acaatcgccg attacttccg ccgtcgtcgt catggaaatg accggcgggc aaagcctgct
    14641 gttttggatg ctgattgcct gcattttcgc ctcgcaggtt tcgcgccagt tttcgccgcg
    14701 tccgttctac cacgcatcgg gaatgcgctt ccgccggcgc gtgcttcagg aaaccgccgc
    14761 ccaaaccggc aatgcgcccg caagaccgca agccgcaaac agcaaaacgg gaatgccgtc
    14821 tgaaaattaa aacgcccccg atcaaacgcc ggcagccgcc ttgattcaaa taccgttccg
    14881 ctgcgcttga aatttcagca acaatgccgt ctgaacgaca gaatgcggtt ttcagacggc
    14941 atttccccat cccgatattg ttcaaacaaa accgaagcgt ttgctataat tgcacttttt
    15001 accgcacacg cacgcccatg tttcccgatt tctcccaaac cctctccaaa gaccgccact
    15061 tcctgcaatc cgccttcaaa aatcccaaca aatacggcgg cttgtccaaa atcgaagaaa
    15121 aataccgaaa atcgcacgaa atcttcttga aacgtttggc cgcattgcca aaacccgaat
    15181 tcgacaacac cctgcccgtt cacgaaaaac tcgaagaaat caaaaaaacc gttgccgaaa
    15241 atcaggtaac gattatctgc ggcgaaaccg gttcgggcaa aaccacgcag ttgcccaaga
    15301 tttgtttgga actcgggcgt ggggcggcag gattgatcgg gcatacccag ccgcgccgtt
    15361 tggccgcgcg ttcggtggcg gagcggattg ccgaagagct gaaatccgaa atcggcagcg
    15421 cggtcggcta taaagtgcgc tttaccgacc acacctcgcg cgatgcctgc gtcaagctga
    15481 tgaccgacgg catcctgctg gcggaaaccc agaccgaccg ttatctcgcc gcctacgaca
    15541 cgattatcat tgacgaagcg catgaacgca gcctgaacat cgacttcctc ttgggctacc
    15601 taaaacaact cctgccgcgc cgccccgatt tgaaagtcat catcacatca gccaccatag
    15661 acgcagaacg cttctcccga cacttcaacg gcgcgcccgt actggaagtg agcgggcgca
    15721 cctatcccgt cgaaatcctc taccgaccgc tgaccggcaa agacgaagac gacgcagaag
    15781 tcgagctgac cgacgcgatt gtcgatgccg ccgacgaatt ggcacgctac ggcgaaggcg
    15841 atattttagt attcctgccg ggcgaacgcg aaatccgcga agcggcagaa gccctgcgca
    15901 aatccacact gcgccgcaat gacgaaatcc tgcccctgtt tgcacgcctg tcgcacgccg
    15961 aacagcacaa aatcttccac ccttcaggcg caaaatgccg catcgtgctg gcgaccaacg
    16021 tcgccgaaac ctcgctcacc gtgccgggca tcaaatacgt catcgacacc ggcctcgcgc
    16081 gcgtcaaacg ctattccgcg cgggcaaaag tggaacaact tcacgtagaa aaaatctccc
    16141 aagccgccgc ccgccaacgc tccggccgct gcggacgcgt ctcagcaggc gtgtgtatcc
    16201 gactgttttc agaagaagat tttaacagcc gtcccgaatt taccgatccc gaaatcgtcc
    16261 gcagcaacct cgccgccgtc atcctgcgca tggcatcgct gaacttgggc gacgtagcag
    16321 cattcccgtt tttagaaatg cccgactcgc ggtatatcaa tgacgggttt caggtgttgt
    16381 tggaattggg ggcagtggag gttgtctgaa aacaggcaga tcgggcgttt atgcccaacg
    16441 agaaccttat tgtcactatt attagggatt aatacaatga atataaa
//
LOCUS       DAWXHA010000050        16344 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.050, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000050 DAWXHA010000000
VERSION     DAWXHA010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16344
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.050"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..694)
                     /locus_tag="AABD07_001175"
     CDS             complement(<1..694)
                     /locus_tag="AABD07_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFB2355719.1"
                     /translation="MNHFKKQQIQNIADFNPREQLAKGALAKSVPMAMLKEFQRQITG
                     YEIKAFNGGAKFRNGDTLLAKITPCLENGKTAFVDILDDGEVAFGSTEFIVLRAKNET
                     NPEFLYYFAISPDFRKRAIECMEGTSGRQRVNENALKTLELPIPEPQIQQSIAAVLSA
                     LDKKIALNKQINARLEEMAKTLYDYWFVQFDFPDANGKPYKSSGGDMVFDETLKREIP
                     KGWGSIELQSCLA"
     gene            complement(744..974)
                     /locus_tag="AABD07_001176"
                     /pseudo
     CDS             complement(744..974)
                     /locus_tag="AABD07_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143539.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
     gene            complement(1023..4027)
                     /locus_tag="AABD07_001177"
                     /pseudo
     CDS             complement(1023..4027)
                     /locus_tag="AABD07_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
     gene            complement(4147..5457)
                     /locus_tag="AABD07_001178"
     CDS             complement(4147..5457)
                     /locus_tag="AABD07_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HFB2355720.1"
                     /translation="MTDLFVREPDAPLAERLRPHTLDDVIGQQHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIRGAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     SLSSDDLKKLIAKVLALPEYRDFTIEADVQELLVNTADGDARRLLNLLEQLLRAADTR
                     RLKILTTEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRRFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLAWLKSLDEEALKAK"
     gene            6103..6704
                     /locus_tag="AABD07_001179"
                     /pseudo
     CDS             6103..6704
                     /locus_tag="AABD07_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691250.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
     gene            6634..7287
                     /locus_tag="AABD07_001180"
     CDS             6634..7287
                     /locus_tag="AABD07_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355721.1"
                     /translation="MPGKKNTPIIRQNHTGWGVQSTIDSDVVLSAANNIVEVGGSPMN
                     QEGITAHGNATITLKAKENNKITVENAAYSSDGISTLINRTGARPGTRDDGNKIILEA
                     GGDNIVTMKSGDADADYVNNSKVLTETPYYKSKRGSNGIFAYGDKSLVKLIGENNIVK
                     SEISEKSKALNGGFRHIGIYSWQNAKVELSAKSDNIVQGGIWGLYSNNSSISLKGKK"
     gene            7405..9009
                     /locus_tag="AABD07_001181"
     CDS             7405..9009
                     /locus_tag="AABD07_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFB2355722.1"
                     /translation="MNYKDDTRITGATVSDKGLVAIKPLNNTNIVADTIHYKGDVLAV
                     NKGKVELDFTPNIRLVGRLDNFSGLTDSKHKNLFENYVANLDSKSAGEINFNLAKDAL
                     WTMTGQSWLDKLEGQGTIDFNNDAKTSGRALHIGELAGANKFLMHLNKDGIHSDMLYV
                     KKGTSTPQEVVVKNLSEVLDSMNYGERLRFATVTNSKNEFVNGKKYIDDTHLMEDALT
                     VEYSAHNGDKNNKDDYNKSFNGSEMTAEKAGDDYVNKTYTDNRQNVYLVKQATGNPSR
                     NVKNINDMFDSTAHYAFTLDTYAKREGERAFSTLDKKEGDWIRLTHTRVIQSNAFRFH
                     NNDFEIGYDRFSLNEQEKKRKWGISLDYGHGRTSLWNTFGKDKIRKYELALYNTTQYI
                     DKEGDETGYIDNVLKIGKLRNRVIARNHMGQLWGKGKYSNTLFSISTEYGRRKFLDDD
                     KLWRITPQVQLQYSYLRGTGYRIDNGINVNLSHANSLIGRLGLDVVRKFDGGKKLFYI
                     KGNIFHEFLGSRSFKAFEGKSHYAQK"
     gene            9040..9511
                     /locus_tag="AABD07_001182"
                     /pseudo
     CDS             9040..9511
                     /locus_tag="AABD07_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691253.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(9537..10453)
                     /locus_tag="AABD07_001183"
                     /pseudo
     CDS             complement(9537..10453)
                     /locus_tag="AABD07_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            10708..12172
                     /locus_tag="AABD07_001184"
                     /pseudo
     CDS             10708..12172
                     /locus_tag="AABD07_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
     gene            12423..12791
                     /locus_tag="AABD07_001185"
     CDS             12423..12791
                     /locus_tag="AABD07_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355723.1"
                     /translation="MNKTLSILPAAILLGGCAAGGNTFGSLDGGTGMGGRIVKMTVES
                     QCRAELDRRSEWRLTALAMSAEKQAEWENKICGCATEEAPNQLTGNDVMQMLNQSTRN
                     QALAALTVKTVSACFKRLYR"
     gene            12864..14273
                     /locus_tag="AABD07_001186"
     CDS             12864..14273
                     /locus_tag="AABD07_001186"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HFB2355724.1"
                     /translation="MRYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMCLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFNATSSNDETVSFCVPSGNFGNVCAGHIAKQMGLPVR
                     CLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWAEVAAGKGFDLRFALDKVGGKYGFTSGKSTHADRLATIRQVYEQDKELIDPH
                     TANGVKVAREVREAGETVVCLETALAAKFDATIREAVGDVAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            14332..15114
                     /locus_tag="AABD07_001187"
     CDS             14332..15114
                     /locus_tag="AABD07_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355725.1"
                     /translation="MQETRFSILLDELAAKQEATIAPYLLADGTKVWVRKAGRHNARW
                     RYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSAGIAVPELLAVRKNALM
                     FGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKRQFLSQAFARNMMWDGKNIS
                     FLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQPAEIQ
                     KLIAGTVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            15302..16078
                     /locus_tag="AABD07_001188"
     CDS             15302..16078
                     /locus_tag="AABD07_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFB2355726.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCIRDESLRFENGQFVMVGLMA
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDEVLISKKPTGTLVAC
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHRGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
BASE COUNT         4098 a         3826 c         4255 g         4165 t
ORIGIN      
        1 ttgctaagca agattgtaat tctatacttc cccacccctt cggaatttcc cgtttcaagg
       61 tttcgtcaaa caccatgtcg ccgcctgagg atttgtaggg cttgccgttg gcgtcgggga
      121 aatcgaactg cacaaaccag tagtcgtaca gggttttcgc catctcttcc aggcgcgcgt
      181 tgatttgttt gttcagggcg atttttttgt ccaaagcgga taggacggcg gcgatggatt
      241 gttggatttg aggttctgga ataggcaact ccagtgtttt taatgcattt tcattgacac
      301 gttgcctgcc ggaagttcct tccatacatt caatcgctcg ttttctaaaa tcgggactga
      361 ttgcaaaata atagagaaat tcgggattgg tttcattttt tgctcttaac acgataaatt
      421 cggtagaacc gaaagccact tctccatcat ctaaaatatc tacaaaagcg gttttcccat
      481 tttccaaaca cggggtaatc ttagctaata aggtatcacc attgcgaaac ttagctccac
      541 cgttaaatgc cttgatttcg taacccgtaa tttgtcgttg aaattctttc aacattgcca
      601 tcggaacact ttttgccaat gctcccttgg ctagttgctc tctcggatta aaatcagcaa
      661 tattttgaat ttgttgtttc ttaaaatgat tcatgatgtt ccgttacaaa actcttcaaa
      721 ggccgtctga aaaaaacatt tcatcggtag ttcttgccgt ctgcggcagt tgtaaactga
      781 aagtttacaa ctgaatcgtc cagttcttgt tctgcaaata tggctttgat gtgtttaccg
      841 atgttttgtt tgctggtttg gtagagttcg gcaatttctt tttgggcaag ccatagttcg
      901 ccgtcaagct cgcgcagggt aaattcggat agtccgtctt ccgtggtgta gatgatgatg
      961 tcgttgttgt gcatagcttt cctgtatcta taaatggtta aggctacctg aaaatctact
     1021 tctcaaatcc gcccgctttc ttttaaatat tcccgtacca acaggcggtt gatggtctgg
     1081 atgtctgcgg gttgaacagg aaattgctgt tccgttctaa agcgttttaa tacgatgccc
     1141 tgcatttgtt tttcaaagta attctggttg tccaaaatct gctccatatc cagcactctt
     1201 tggtcggcgt cggttttgac gccgtttagc gcgttgaaga ctttgagttt gtctccgtag
     1261 agggcggcgt tttccatcaa ccgcttgtgg atacgtgcgt atttggcgtc gccgccgtat
     1321 ttgtgccgca agaggtcgtt ttggcggttc agctctttga ttttggcata gacggtttcg
     1381 agtgtggcga tgtttgtctg catttcttct tgcccgactt cggcgaggtt ctttttcttg
     1441 aagatgcgtt ccagctcttc gcgcaggctg atgtattcaa ggtcgtcttg gtcgaagttg
     1501 cccgccagcc cttcgcgcac tttgcgcatg atgtctttta aatcgtcggc aagtttgagt
     1561 tccgcctcgc cgattttgac gaattgaaag taaacgtctt ccagcgcttc attgagcaaa
     1621 tgggcggtgt cgccttgctg taatttttcg gcaaggttta aggtatccaa gcgggcggcg
     1681 gtttcgcggt acaaaagatt gagcttgtca aaatccagat gcgcaagaaa ttcgtggctg
     1741 ccttgcaggc gcaggatgtt gtacaactct ttggcggttt gcagggcttt ttttaaggct
     1801 agaagctgtt ttttgtcttc tatttggcta atttggctgc aaaattcttc ggcgttttcg
     1861 gtatcgaaat caaacagggc gtttttaatg tctgcaattt cctgttcgat ttcttcggcg
     1921 gttttgaata gctggctgta actgccgatt tcgtcgccca attcgttgga aagttcgtcc
     1981 caataggcgc ggttggtttt gtcaaattcg cgttcgatat cggcaaaatc gacgacatag
     2041 ccgtagcggt aagatttgta ggtgcggttg acgcgggtca gggtttgtaa aaggttatgg
     2101 gcttttatca gtctgcccaa atagagcttt ttcaggcgcg gcgcgtcaaa gccggtcaaa
     2161 agcatgttgt acacaaacaa gatgtcggtt ttgcccgctt tgaaatcttt aacccattgg
     2221 tcgcgttctt ccttagtgcc gacgtcgtgc aatatcaacg cggcggtgaa attgtggtct
     2281 gaggccgtct gaaaatgctc aaaaagctgg cgtgcctgtt ctgcgctgtc gcaaacgacc
     2341 atggcaccga ggctctcgtc ttggttggtt tttctgaatt tggcgaagtc gtccaagatg
     2401 tagtcaagca tcgggtggac gaagtgcgga tgggcgtaga tttctttgcg gtcaaagctg
     2461 cctttttcga tttcaagttg cgccagtgct tcttgtaatt gcgccttgta tcggctgccg
     2521 atttcttcgc gtatcaggcg cagggtgtag ccgtcggcaa tggaggcgtt gtaatagtat
     2581 ttgtggatgt agtcgccgaa gagttcgcgg gtgttgacgt tgcctgcggt tacgccgata
     2641 agcggcgtgc cggtcagccc gattttgacg gcgtttacgt cggactgatt aaggttggca
     2701 agaaatgagc ctttggggtt gtagctgcgg tgtacttcgt cgagaaaata gacgcgccgg
     2761 atggcgaggt cgtagtcgtt acgggcgaca acacgggggc gtctttgaat ttttggatgt
     2821 tgacgacggt gatttccggt ttgcctgcgt ggttgtgcag ggtttgggcg gatttgatgt
     2881 cggcaacgaa ggcttcgcgg ctgtcgatgg tatggacgat taagtcgcgg gcggtaaatt
     2941 cccgctgcgc ctgtttcaat aaatcgagcc tgtccacgat gaaatagaat ttcggcacga
     3001 taccctgttt ggcgtaatag tgggtcaggt aacgggtgtt gtaataggca ggcgcggttt
     3061 tccccgatcc ttgggtatgc caaatcacgc cttttttacc gccgttcgat aaatgttttt
     3121 caatggcaag ggtggcaaac agttgcggat aacgcatgat gtgtttttgc accgaacctt
     3181 gacttgcttt gacgtaagtc agcccgtgtt gcaggagaaa ggcaagacgt tcgcggcaaa
     3241 gcagcgaagt caggatgcgg ttggtcggcg tatcgggcga tttattgctg ataaattcgg
     3301 ggctgtgttt gataacgggc agattattgt cttgtagaac gttgttttca aggtcgtctg
     3361 aaagcgtgtc caataattcg gtaaggttta atttatgctc ttcgcggaag tagttgaata
     3421 cgggcttgcc gcaagcagac gaggcgtaaa acgcgccttg tgccggctcg gttgcgccgt
     3481 cgtcgtattc catgttgttg gaaaaaatca tgaattgggt gatgttgata aaacggcgga
     3541 atttgggatt tttcgcacgt ttgcccatgc gctcccgctc ttcgccgatg ccgcctttat
     3601 tgttgggctt tttgacttcg ataaagacca aaggcatgcc gtttaccagc agggcaatgt
     3661 cggggcggaa tgcttcgtcg ccgttgatac aaggcaactc agttacaacg tggaaactgt
     3721 tgttgtcaaa attttggaaa tcgatcagct tcttaccgcc ggattgattg gtgaggcgtt
     3781 cgtaaaattt ttgccccaaa tcttcgttat ccagctctaa gcgtatgtcg gcaagcaggc
     3841 ggcgtgcatc atccggcggc aaatcgggat tgatgcggca gaggctgtct acaaagattt
     3901 cgggaaagat attggtttgt ctgtcccaat ttgcattttt tagcgaaaga taatcatagc
     3961 ccaagcgcat caggtgcaaa acggcgggga ttttgacgcg ggaattttcg ttgtgggttt
     4021 gggacataaa cgtaacgtaa tgggtcatca aaatttattg aaacggatta taacacctga
     4081 aaaaagccga tacgcctttt cggtgtaccg gctttgccat actgttctgc ttcagacgac
     4141 atcgcttcat tttgccttta atgcctcttc gtccagcgat ttcaaccatg ccagcttttc
     4201 gccgattttg atttccagcc cgcgcgggac gggttggtaa aagtccggtt cgtccaagcc
     4261 gtcgggcata taactttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta
     4321 ttcgcgtccg tagcccaatt ccttcatcag cttggtcggg gcgttgcgca ggtggacggg
     4381 cacttcgtcg ctggcgtttt ctttgacgaa gcggcgcatt tggttgtatg ccttgtagcc
     4441 cgcgttggat ttggcggcgg cggcaaggta cagcacggct tgcgccagcg cgagttcgcc
     4501 ttcgggcgag cctaagcgtt caaaggtggc ggcggcatcg ttggcgattt ggaaggcgcg
     4561 cgggtcggca agcccgatgt cttcccaagc gatacgcacg atgcggcggg cgagatagcg
     4621 cgggtcggtg ccgccgtcga gcatacggca aaaccaatac agcgcggcgt tcggatgcga
     4681 accgcgcacg gatttgtgca gggcggagat ttggttgtag aaactctcgc cgcctttgtc
     4741 gaaacggcgg atttgcgcgc ccaagctgtc ggcgagaaat tcggtggtca ggattttcag
     4801 acggcgcgtg tcggcggcac gtaaaagttg ttccaacaaa ttcaataatc tgcgcgcatc
     4861 accgtcggcg gtattgacga gcagctcttg cacatcggct tcaatcgtga aatcccggta
     4921 ttcgggcaaa gccaacactt tggcaatcag tttcttgagg tcgtctgaag acaaggattg
     4981 caaaacatat acctgcgcgc ggctcaacag cgcgggattg acttcaaacg acggattttc
     5041 cgtcgttgcg ccgataaagg tcagcaaacc gctttcgaca tgcggcaaaa acgcgtcctg
     5101 ctgcgccttg ttgaagcggt ggacttcatc gacaaacaaa atcgtcgcgc gtccctgctg
     5161 caaagcgatt tcagccttat cgattgcccc gcggatgtcc ttcacgccgg aaaacacggc
     5221 ggaaacaggc aaaaactggg cattgaaact ctgcgccaaa atccgcgcca acgttgtctt
     5281 gcccacgccc ggcggccccc acagcaacat agaatgcggc ttcccgcctt ccaccgccac
     5341 gcgcagcggc ttgccttcgc cgattaaatg ctgctgcccg atgacatcat caagcgtatg
     5401 cgggcgcaga cgttcggcaa gcggtgcgtc gggttctcgg acaaacaaat cggtcataac
     5461 ggctccgtca acaggttttc agacaatatg attatacggc agggaaaggc ggcgtgccgc
     5521 atacggatac cgccccaccg tttgtactaa gccgatctta ggcgtacaat tgggaaattt
     5581 caggaaattt atacgctatg ccatccatgc agctttgcaa ccggacccgc aaagaccagg
     5641 tcccgtttta accatgcggg gaagttaaga ttacagtaaa caaaactatt ttgccttatt
     5701 ggaagaaagg ggaacagtta tgagaaattg gaacttatta ccaccgggga aggggcagat
     5761 ggagacttac tggtcaacgg ttcttacggc atccgttctt ttgcagacct aaaattggaa
     5821 tacaaacccg aattatcggt gagaagcaat catgacatta ttttcaacaa tgattttcaa
     5881 tctgttgacg tacaacccta ttccggaaat atccatttgg atgccaaagg aaaaattcaa
     5941 tttaatttga atgttgccga taaggtaaca gatccaacca cacatcaaga aaagttagtg
     6001 aacgataacg ctttagtgcg gtatgtcaac aatatcaccc cctccgatga aaatgacaaa
     6061 ggcagcatat ccttccattc aaaaacaggc aatttgttca atatgaacgt taacgttcat
     6121 aaaggcacac accatttcgg tattcacaac ctccgcaata ccaatgttaa tctgactgcc
     6181 gaagacggcg ataatgtggt tgcgattaaa gggaagcttg ccgagcctat gccggcagga
     6241 aagttgagag tacaagtttt ttaaggggta ttgaaacggc ttttaaatcc aataccgtat
     6301 taacggggaa taacaataaa atatccatca ccactgaggg cgacggcttg ggattgggcg
     6361 taaatggcct ccagtccaac tccccctatt ccggacacac gacgggtact ttcatcaata
     6421 atcaaccaag caatactacc caaccttccc ttgacggcac cagcaccatc gaactcaaag
     6481 ccgtcaaggg gaataatgaa gttgatttaa atgtaaaaaa ccacgcctcc gtaaaaggca
     6541 ttatcacgtc gcattctgca aaagcaacgc ttgaagccga ggaggataat attgtccggg
     6601 ttaaaaatcc ggacaccaag acggctttaa tcaatgcctg gaaagaaaaa taccccaata
     6661 attcgccaga accatacagg gtggggggtt caatccacga ttgacagcga tgtagttttg
     6721 agtgcggcaa acaatatcgt tgaagtagga ggcagcccga tgaaccaaga agggattacc
     6781 gctcacggaa atgccacgat taccctcaag gcgaaagaaa acaataaaat taccgtggaa
     6841 aacgccgcat acagcagcga cggcatttcg actctgatta acagaacggg ggcaagaccc
     6901 ggaacaaggg atgatggaaa taaaatcata ctggaagccg gcggcgataa tattgttacc
     6961 atgaaatccg gcgatgcgga tgcggattat gtaaacaatt ccaaagtatt aacggagaca
     7021 ccatattata aaagcaaacg aggttccaac ggcatttttg cctatggcga caaatcgctg
     7081 gtcaaactga ttggcgagaa taatatcgtt aagagtgaaa tcagtgaaaa atctaaggca
     7141 ttaaatgggg gatttcgcca tatcggcatt tattcatggc aaaacgcgaa agtcgaattg
     7201 tctgcgaaga gcgacaatat cgtacaaggc ggaatttggg gcttatactc caacaactcc
     7261 tcaatttccc tcaaggggaa aaaataatgt gatttcaaac ccgaaatata atgttttcgc
     7321 ctacaaaaag gcaaaggtgg atttggtcaa attaccattg actccaacgt tgccaatctt
     7381 gcaaggcaag atggttcaat tcatttgaat tataaagacg atacccgtat cacaggggca
     7441 accgtatctg ataagggttt ggtagccatc aaacctttga ataacacgaa tattgttgcc
     7501 gacactattc actataaagg cgatgtcttg gcggtaaata agggtaaagt ggaattagat
     7561 ttcacgccga acatccgttt agtgggacgt ttggataatt ttagcggctt aaccgattcc
     7621 aaacataaaa atttattcga aaactatgtt gcaaatttag acagcaaaag tgcgggcgaa
     7681 attaacttta atttagccaa agacgcatta tggacgatga caggtcaaag ctggctggat
     7741 aaattggaag gacaaggcac tatcgatttt aataatgatg ctaaaacaag tggacgcgcc
     7801 ttacatatcg gtgaattggc gggtgccaat aaattcttga tgcatctgaa taaagacggc
     7861 attcacagcg atatgctcta tgtgaaaaaa ggcacttcga caccgcaaga agtcgtcgtc
     7921 aaaaatctgt ccgaagtgct cgacagtatg aattacggcg aacgtttgcg tttcgctaca
     7981 gtaacaaact caaaaaatga atttgtgaac ggtaaaaaat atattgacga tacgcacctt
     8041 atggaggatg ccctgactgt cgaatactcc gcacataacg gcgataaaaa caacaaggat
     8101 gactataata aatcctttaa cggctctgaa atgacggcgg aaaaagctgg agacgattat
     8161 gtcaataaaa cctataccga caacaggcaa aatgtctatt tggtcaaaca ggctaccggc
     8221 aatccgagcc gaaatgtcaa aaatatcaat gatatgttcg attcaaccgc acattatgcg
     8281 ttcactttgg atacttatgc caaacgcgaa ggggagcggg ctttttcaac gttggataaa
     8341 aaagaaggcg attggataag gctgacgcat acccgtgtga ttcaatccaa tgcgtttagg
     8401 tttcataaca acgattttga aatcggatat gaccgattca gcctcaacga gcaggagaaa
     8461 aaacgcaaat ggggcataag tctcgactac ggccacggca ggacatcatt atggaatacg
     8521 tttggcaagg acaaaatcag gaaatatgaa ttggctctgt acaatactac ccaatacata
     8581 gataaagaag gagacgaaac agggtatatc gacaatgtat taaaaatagg aaaactgcgt
     8641 aaccgtgtga ttgcacgaaa tcatatgggg caattatggg gcaagggaaa atatagcaac
     8701 accctattct ctatcagcac cgaatacggc cgccgtaaat ttttggatga cgataaattg
     8761 tggcggatta caccgcaagt acagttgcaa tattcctatt tgagaggtac cggctatcgg
     8821 atcgataacg gcataaacgt caatttaagc cacgcaaaca gcctgatagg ccgcttgggt
     8881 ttggatgtcg tgagaaaatt tgacggaggc aaaaaacttt tctatatcaa aggcaatatc
     8941 tttcatgaat ttttgggcag tcgttccttt aaggcatttg agggcaaaag tcattatgct
     9001 caaaaatgaa atacgagggg gacttggtat tccgccggat tgggctacaa tgcgcggaca
     9061 ggcaaaaaaa acgaatgtct ttgccgatgc ggaaaaaaga gttttccggc gggaaaaaag
     9121 gatcgtacaa catccgctta tccgtttccc atcagtttga ctgaatgata tcggggccgc
     9181 gccattattc ggcaggcccc attttattgc cacacattgc ctgcccgatt cccgtttcaa
     9241 cagcaaaccc ttccaatatt ttgttcaaac ttggatcgcg gcagatgggg gcgtgcaagc
     9301 cccgcaaggt ttttttggct tttacggaac agcacgcatt tcgccaaacg gcaaaattgc
     9361 attaacggaa ttgaaaactt ttggaattgt gcaaaacggc atttgcgtca gtttaacggc
     9421 atttccaaag ggcattttaa gccgtattcg agagaatgcg gatggcgttt tcagtgtttt
     9481 cagcgtgata aaattcaaat ttctattcta aaacaatcag caaagcagga tttatttcag
     9541 ttgtccgaga caacgggcgg ctgcaccgcc tgcactcccc atactttttc aacgcactcg
     9601 agcaggagtg agacgtgggg attatcctcg tattcttccg cataaatgaa attgagcggc
     9661 atactgtggc ggcacgattc gataatagcc acgcccgcgc cttcttttgc cgccgcttcg
     9721 gctttgtttc cctgcaccat tgccacacct ataccgcctg caaccaaatc gataagggtt
     9781 tgggggtagt cgcacaatat ctgttttttt gggtgagagc cggttgctgc gccaaaactg
     9841 gtgcaggtgc ttcctacttc cggacacgcc cgacatttct atccatacgc attcttgcag
     9901 gctctgcgga agggagcggg tcagccggga atattggctt tgcgggcaaa tcagcgcgta
     9961 ggtcaggttt tgcaggaata cgctgcggat gccgccttgg gcggcgttgc cgagtataaa
    10021 gccgccgtgc agggttttgt gttggatgcg cgagaggatt tcgccgctca ttccgtattg
    10081 gatgtgcagg cgcgttttgg ggggctgttt gaccgatatt gtccgtcagc gcgacgagtt
    10141 ttgccgaatc gatggggtgg ataatgccca aactggtctc ttccgaataa tcgcctgcca
    10201 gcgttttggc aaaatactcc aacttgtgtt tgtattgcag cagggattcc gcttcgggca
    10261 acagtatttc gcccgcccgc gtcaatacca tgcctttccc cgtgctcctg aacagcggcg
    10321 tgccgacata ttcttcaagg gctttaattt gggcggaaac ggcgggctgg gaaaggaaaa
    10381 gtcgtttggc ggtttgggta aggttgccct cgtgcgcgac ggcgacaaat gattttaatt
    10441 gtacggcatc catgtatccc tccttgtgcg gatgttttct atatttgtgc aatcgaaatc
    10501 ttttaggcgg attgttgctg aaaattaact ttttaatcaa gtggtttgta aattgtatca
    10561 gttttccgga tgatgattat taaaaaaaaa ttggttttat tgcctgtttg ggctttaaat
    10621 ggggttacgg cttccgaacg cagcccgtat caaaaagaaa agtcatgcgc ccccttttac
    10681 gaggcgcgat atataaggag gaaggttatg gaaaaacata atgggactta tcgggattta
    10741 caccgtccgg cttcggaatt tgcgacgcgg gacgaatatt tggaacatga attgcagatt
    10801 atgcaaccaa aacgctggcg gcccaacctg ccctttcgcg attaccgctt cgagtgggag
    10861 gatttgattc ctgcgatggc gggaacgatt ggaaaagtgg tgatggtggg ggggcggcgg
    10921 cgtttgccgc acctttgggg ctgcctgaca gctttgtact ggaaaatgtg cgctatgagc
    10981 ttttaatcgc cgccgcgttt atcttattgg tatcgggctt ttttctgccc ggcgccaacc
    11041 tgcccggtac gcacgggccg ctgattccga tgattcccat cgttgtgtcg gcaggcgggc
    11101 atcctttggc gttcggcatt tcgattgcgg ttttaggtct gctgatggct ttatttcgcg
    11161 gcggcagtat tatggcgaag ctgacaagca acggcgtatg cggcggatta ttactctatt
    11221 tgggctttat cggcacgacg gggcaggtaa aaaaattgtt ttcgtgggca ggcggtttta
    11281 atatgcccta catcgctttt accgtcatta ttgtaacgat tgtgatgtac gctttgttgg
    11341 agcattggaa aaaacgctgg ttggccgtgc ctttgggatg cttgattgcc ggtgtggcgg
    11401 catttgcatt gggtgcgccg tttgagtttc acaccgcccc cggcctgcct ccaatgagtc
    11461 ctgcttattg gtagggtgaa aacagcggct ggcatctggg gttgccgacg gcagaaagtt
    11521 ttttggttgt ctttccattt gcggtattgg ctgttgcaat gtggtcgccc gattttttag
    11581 gacatcaagt gttccaaaaa atcagctatc cggaaaaaac cgataaggta ttgatgaata
    11641 tagacgacac catgacaagt tgttctgtcc gtcaagcagt gggttctatt ttagggggtg
    11701 caaattttac ctcttcttgg ggaacttata tcgtgccggc atcgattgcc aaacgcccca
    11761 ttccgggcgg tgcggtttta acggcggttt tatgtattat cgccgggttg tggggctatc
    11821 cgatggactt ggcgatttgg cagccggtat tgagcgtagc cttgatcgta ggcgtatact
    11881 taccgctttt ggaagcgggc atggaaatga cgcgcaaagg caaaaccacc caatccgccg
    11941 ccatcgtggt gttctcttcc gtctggtcaa tccggttttc ggctgggcgt tgacgatgct
    12001 gttggataat ttgggcttaa tcggctgcaa agaacgcagc gcgcaattag gttttgtcgg
    12061 acgagtattg atacccgcag taggtttctt aatcttgtgt gtggcgatgg gtgcggtcgg
    12121 gatgctgccc ggtatccctc cgtttttgga gcagttcaaa tctttgggct aggctgaaat
    12181 cgcaaatgcc gtctgaaccg gtttcagacg gcatttttgc aaacaggcaa aatgacggcg
    12241 gcgggatttt ttattttccc gattgaagta taatgttgcc gggcttcaac cggatattca
    12301 aacggtttgc tccaacactc ggaacggcgc ataaaacgcc gcccttcgcg ttatcccgaa
    12361 cggggcggct aatcagatcc tatcgccata aaaggcgggg tttcaaccga aaaggaattg
    12421 agatgaataa aaccttgtct attttgccgg cggcaatctt actcggcggg tgcgccgccg
    12481 gcggcaacac attcggcagc ttagacggcg gcacgggtat gggtggcaga atcgtcaaaa
    12541 tgacggtaga aagccaatgc cgtgcggaat tggacaggcg cagcgaatgg cgtttgaccg
    12601 cgctggcgat gagtgccgaa aaacaggcgg aatgggaaaa caagatttgc ggctgcgcta
    12661 ccgaagaagc acctaaccag ctgaccggca acgatgtgat gcagatgctg aaccagtcca
    12721 cgcgcaatca ggcacttgcc gccctgaccg tcaaaacggt ttccgcctgc ttcaaacgcc
    12781 tgtaccgcta accttcttca gacggcatga ggcagatgcc gtctgaatcc gttttcctgc
    12841 aatttcgaca aacgagaaaa atcatgagat acatcagcac gcgcggcgaa accgcacaca
    12901 aaccgttcag cgaagtttta ttgatggggc ttgcacccga cggcggactg atgctgccgg
    12961 aacattatcc gcaaatcggg cgcgaaacct tggacaaatg gcgcggtttg gcttatcccg
    13021 aattggcgtt tgaaatcatg tgcctgttcg ttaccgatat tccggaggac gatttgcgcg
    13081 acattctgaa ccgtacttac acggaagcgg cgttcggtac taaggaaatc acccccgtcc
    13141 gcacgctttc agacggcatc aaaatccaag ccttgtccaa cggcccgacg ctggcgttca
    13201 aagatatggc gatgcagttt ttgggcaatg cgtttgaata tgttttaaac aaagaaggca
    13261 aaaaactcaa tatcttgggc gcaaccagcg gcgatacggg ttcggctgcg gaatatgcct
    13321 tgcgcggcaa aaaaggcgtg aacgtattta tgttgtcgcc cgacggtaaa atgagcgcgt
    13381 tccaacgcgc gcagatgtac agcctgcaag acgggaatat ccacaatatc gccgtgaagg
    13441 ggatgtttga cgactgccag gacattgtga aggcagtgca gaacgatgcc gcgttcaagg
    13501 aaaaatacca tatcggtacg gtcaattcga tcaactgggg gcgcatcgtc gcgcaagtgg
    13561 tttattactt tgcaggctat ttcaatgcca cttcaagcaa tgacgaaacc gtcagctttt
    13621 gcgtaccgag cggcaacttc ggcaacgttt gcgcgggaca catcgccaaa caaatgggcc
    13681 tgcctgtccg ctgcctgatt gtcgcgacca atgaaaacga tgtgctggac gagtttttca
    13741 aaaccggcgc ataccgcccg cgcaacagcg cgcatactta tgtaacctcc agcccgtcta
    13801 tggacatttc caaagcgtcc aacttcgagc gtttcgtgtt cgacctgatg gatcgcgatc
    13861 ctcaggaaat caatacgctg tgggcggaag tcgcggcagg caaaggcttt gacctgcggt
    13921 ttgccttgga caaagtcggc ggcaaatacg gctttacctc cggcaaatct acccacgccg
    13981 accgcctcgc caccatcaga caggtttacg agcaagacaa agaactcatc gacccgcata
    14041 ctgccaacgg cgtaaaagtc gcccgcgaag tgcgcgaagc gggggaaacg gtggtttgtt
    14101 tggaaaccgc gttggcggcg aaattcgatg cgaccatacg cgaagccgtc ggcgatgtcg
    14161 ccattccgcg ccccgccgcg ctggaaggtt tggaaaacct gccgcagcgc gtgcaaaccg
    14221 tgccgaacag tgcggatgcg gtaaaaggca tcatcgaaca aacccttgcc tgatgttccg
    14281 tatgggcggc attccatccg aacttaagat tgaaagaaaa tgaccttacc tatgcaggaa
    14341 acccgttttt ctatactgct ggacgaattg gcggcaaaac aggaggcaac catcgccccc
    14401 tacctgcttg ccgacgggac caaggtatgg gtacgcaaag caggcaggca caatgcgcga
    14461 tggcgttacg cgctgctcgg tatggttgcc cgatatttga aactgggggt gttgaagccg
    14521 gttcccagcc tcggcggcga gcctgccatt gcaaccgaat caaaacgcct gtacgaattg
    14581 cgttcggcag ggatagccgt tcccgaattg ctcgccgtcc ggaaaaatgc ccttatgttc
    14641 ggcaatttgg aaggcatccc gctcgatacg caaatccgcc aagaagccga agccggaaag
    14701 gcggacgctt ggcttgccgg tttggaagcc attgcacgcg tgcataaaaa acggcagttc
    14761 ctcagtcagg cgtttgcgcg gaatatgatg tgggacggaa aaaacatcag ctttttggat
    14821 tttgaagacg acccttccga ggtcctgacc atagcgcaat gccaagcccg cgattggctc
    14881 tgctacatcc attcgaccgc gctgatattg aaaaacggcg gactgctgga agcggctgcg
    14941 gaaaaatggg gcggcgtatt gtcggatcag cctgccgaaa tacaaaagct gattgccggc
    15001 accgtcaaac cgatcctccc gatacgcagg ctggaacacc cccgctgggg acgggacgcg
    15061 ctcaggctgg cagcctcgat ttccttaatt tccctcgccg atatgccgcc gtaagccacc
    15121 gcccgcccca cgatgccgtc cgaagccctt cagacggcat ataaccaacg cgcatcaggc
    15181 attgtcgcaa ccatccgttt cgtttagaat tttgacttta tcccgaatcg ggcagacatt
    15241 tccactctgc cgcacgtccc gaacaagcac tatccatttc ttttactgac aggaaaccca
    15301 aatggcagca ttcaataccc aaaaagtatt gtccgtacac cactggacag acgcatattt
    15361 tacctttacc tgcatccgcg acgaatcgtt gcgctttgaa aacggacagt tcgtcatggt
    15421 cgggctgatg gcggacggca agccgctgat gcgcgcatac agcgtcgcct ccgccaactg
    15481 ggaagaacac ctcgaatttt tcagcattaa agtccaagac ggcccgctga ccagccgcct
    15541 gcaacacctc aaagtcggcg acgaagtgtt aatcagcaaa aaaccgaccg gaactctagt
    15601 tgcctgcgat ctgaatccgg gcaaacacct ttacctgttg agtaccggta ccggcatcgc
    15661 ccctttcttg agcatcacca aagaccccga aatttacgaa cagtttgaaa aaatcatcct
    15721 tgtacacggc gtgcgctaca aaaaggattt ggcatactac gaccgcttta ccaaagaatt
    15781 gcccgaacac gaatacctcg gcgacttggt taaagaaaaa ctgatttact acccgattgt
    15841 ttcccgcgaa gaattcgaac accgcggccg cctgaccgac ctgatggtaa gcggcaaact
    15901 gtttgaagac atcggcctgc ccaaaatcaa cccccaagac gaccgtgcca tgctgtgcgg
    15961 cagccctgcg atgctgaaag acacctgcaa agttttggac gatttcggtc tgacagtctc
    16021 cccgaaaacc ggcgtgcgcg gcgactacct gattgagcgc gcgtttgtgg atcaataagc
    16081 cgcttgaaaa tgccgtctga acggcatcag cgataaaaaa acccgaatcc tgccaatcag
    16141 gattcggggt ttttatagtg ggtaaaaatt agaaatgcac atttccgtca ttccaacaca
    16201 ggtgggaatc cggacttacc tgtttcatta tcgtttgaaa ataaaagaga aaccaaacat
    16261 atagattccc gcttgcgtgg gaatgacgac ggtgttttgc cgtagccaaa gcaggaaaac
    16321 atccttattg tcatttcatc atga
//
LOCUS       DAWXHA010000051        15520 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.051, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000051 DAWXHA010000000
VERSION     DAWXHA010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15520
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.051"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..81
                     /locus_tag="AABD07_001189"
     CDS             <1..81
                     /locus_tag="AABD07_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFB2355727.1"
                     /translation="LRECEFRFNFGTPSRQLKILRDRCGI"
     gene            136..348
                     /locus_tag="AABD07_001190"
     CDS             136..348
                     /locus_tag="AABD07_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2355728.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
     gene            533..823
                     /locus_tag="AABD07_001191"
                     /pseudo
     CDS             533..823
                     /locus_tag="AABD07_001191"
                     /inference="COORDINATES: protein motif:HMM:NF016595.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
     gene            849..1043
                     /locus_tag="AABD07_001192"
     CDS             849..1043
                     /locus_tag="AABD07_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HFB2355729.1"
                     /translation="MELKAVTSLTIDTPQTTITGHLTVNQTTTAQGLLTYQNGMNGQG
                     GSLSEHTHPDDSGGTTEKPQ"
     gene            1040..1366
                     /locus_tag="AABD07_001193"
     CDS             1040..1366
                     /locus_tag="AABD07_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate protein"
                     /protein_id="HFB2355730.1"
                     /translation="MTDAENGRGQDTLAHIAQSIRNILFTRIGTRLMREEYGSFIPDL
                     IDMPAGHAAIALIHQAAVTALARWKPRITVRRIQADTADLAVGKIKLTLDVTLADGGE
                     RTYRIK"
     gene            1387..2634
                     /locus_tag="AABD07_001194"
     CDS             1387..2634
                     /locus_tag="AABD07_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate protein"
                     /protein_id="HFB2355731.1"
                     /translation="MGNSRLSQLPAPAAIEETDFEGIFARKKAALTALCPESIRETVA
                     QTLELESEPLTIDLQQQAYQELLVRNRINEAVKANLLAYAQGSDLDHIAAQYGLSRKT
                     IRAADPDANPPVAAEYETDDAFRARVQAHPEKYAAGPRTAYEAHAIDAHPQITHARAV
                     RRAAGTVEVYIKTQSGTPDETILTAAREYLSAETRRPLCDNVQVTAAQPKDAAVEYSA
                     EYHPAANIQAERQTACEALDNLWRQNAHIGASVALSKIIGALDTPGVKKNHTAQPRCR
                     HRMRQRRIHPNHVHARARINEQHRPREQQPPATRTGKADRTRNCRRLPPTRPRIFTLS
                     RLRKKHRHGRGLGLCRNRRSPPQPHRRLCRNPRPKRHAVRHPRPLPHLAAGRNPNYRT
                     RRRVQVGRLGLVRRQPHIRQAQG"
     gene            2594..2821
                     /locus_tag="AABD07_001195"
     CDS             2594..2821
                     /locus_tag="AABD07_001195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355732.1"
                     /translation="MFDGSRTFGRRKGDWAEYRIVLTRPVSIRQTARIRAMLAEIAPL
                     RCELTALDYRNHPHRWNGKIRFNGEYGFGTT"
     gene            2861..3381
                     /locus_tag="AABD07_001196"
                     /pseudo
     CDS             2861..3381
                     /locus_tag="AABD07_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358063.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            3610..5064
                     /locus_tag="AABD07_001197"
     CDS             3610..5064
                     /locus_tag="AABD07_001197"
                     /inference="COORDINATES: protein motif:HMM:NF019126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HFB2355733.1"
                     /translation="MNSLKTDGVYSLPTAVGSSNLPVENTACHIQVIAGTQPGWCRQL
                     GYPAYTSDVYERYQTSSANDDWSAWKKLNSEGIPAGAIVSFPKAVRNPAGYLKADGTI
                     FAQNTFPDLYRALGNTNKLPDLTRTDIGITAWFPSDQIQTGWLAFDDIRKRVTESAYP
                     ELYRLLTEKYGRIQNVPQAEDRFIRNAGNGLAVGTKQEDEIKRHVHKVFSHWANHPDA
                     AAVGYEDRNERQRSALVSTWTDGDLNDNGFLTPRLDSKMATGGAENRPKALVLKLCIK
                     AADTLGEAVFRIKSHGETANVGALDASRLAQGLQEKADRDHTHTTAQIQGLDEKISAA
                     VAAQFTRQTIGGVDIVRFPDGTMIQTGSYRFARGGSPIGNEVVFPIAFADGNVKCFVS
                     ERHSGRVNGERQHNWLFIRAKNHAAAIITNWYESSCDWMAIGKSASGNAASPTPIVPE
                     IPEIDEEPQRESGRSSTGLRNPRRHRGLDFPVGS"
     gene            5163..5492
                     /locus_tag="AABD07_001198"
     CDS             5163..5492
                     /locus_tag="AABD07_001198"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355734.1"
                     /translation="MPRQSCHSSPFPRKRESGTQTRQESIGKNNPTAVIPAQAGIQTH
                     NVKAVYQKKPKPNALDFRLRGNDEELGSDERREQPRKKPPTPSDGIGNKNRTAETARE
                     RIAGRAR"
     gene            complement(5508..5819)
                     /locus_tag="AABD07_001199"
     CDS             complement(5508..5819)
                     /locus_tag="AABD07_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HFB2355735.1"
                     /translation="MKMHNPAHPGLVLKEYINGASITDIAKRLGVSRVALSRIVNAQS
                     SITPEMAVRLSQLLNTSPDFWLNMQAGYDLWQIRQRKTFDIAPLFPEPPLSSMKTGAR
                     T"
     gene            complement(5827..6106)
                     /locus_tag="AABD07_001200"
                     /pseudo
     CDS             complement(5827..6106)
                     /locus_tag="AABD07_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011145234.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Killer protein"
     gene            6191..6804
                     /locus_tag="AABD07_001201"
                     /pseudo
     CDS             6191..6804
                     /locus_tag="AABD07_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7266..7649)
                     /locus_tag="AABD07_001202"
     CDS             complement(7266..7649)
                     /locus_tag="AABD07_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HicB family protein"
                     /protein_id="HFB2355736.1"
                     /translation="MIYYPAVLFQDPDQSNWGVIIPDLPGCYPVGDTVADALADAKAA
                     AMFHLEGLLQENLPIPEAQSIEVNRDNPDYADAVLWTMVEADDAALTGQVRFNVSWPQ
                     HILNRVDACTAARHETRAVFWRKPP"
     gene            complement(7939..8952)
                     /locus_tag="AABD07_001203"
     CDS             complement(7939..8952)
                     /locus_tag="AABD07_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HFB2355737.1"
                     /translation="MKKNLPALALASMLILSGCDRLGIGNPFSGKEISCGSEETKEIL
                     VKLVRDNVEGETVKTFDDDAFKDQAFADIGISHIRRMVERLGITVDEVRTTEKTDTSS
                     KLKCEAALKLDVPDDVVDYAVAANQSIGNSYKKTPDFFEPYYRKEGAYYVKTISYSVQ
                     PTDDKSKIFAELSQAHDIIHPLSELVSMALIKEPLDKAKQRNEKLEAAEATAQEAREA
                     EEAAAQEALGREQEAARVSEWEERYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGM
                     DKICANNAKAEGETPNGIKVSELACKTAETEARLEELHNRKKALIDEMVREEDKKELP
                     KRL"
     gene            complement(9169..10815)
                     /gene="pgi"
                     /locus_tag="AABD07_001204"
     CDS             complement(9169..10815)
                     /gene="pgi"
                     /locus_tag="AABD07_001204"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFB2355738.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIMVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     TMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNRKAVAEFGIDIANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMCGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETEPQKHDSSTERLINLYLQTNRK"
     gene            complement(11041..11889)
                     /gene="hexR"
                     /locus_tag="AABD07_001205"
     CDS             complement(11041..11889)
                     /gene="hexR"
                     /locus_tag="AABD07_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HFB2355739.1"
                     /translation="MLSKISESLADLSGAERKVAECALAEPKWFVHAAVAEIADRASV
                     SQPTVIRFCRSLGYKGLPEFKLSLSASIGHEGMPYVHEELNADDDMANVVEKVLGNAA
                     AALLGERRFLKESELENGIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            complement(11938..12924)
                     /locus_tag="AABD07_001206"
     CDS             complement(11938..12924)
                     /locus_tag="AABD07_001206"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HFB2355740.1"
                     /translation="MSSTPNKHADYPRLVADIGGTNARFALETAPCVIEKVAVLPCKE
                     YDTVTDAVRAYLNQSGATGVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQALGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSPAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYRHVSAERFLSGAGLSLIYETLAAKQKAEP
                     AKLMPSEITEKALNCESPLCRQALDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRM
                     LDYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGIAGAAAALGNHLKNV"
     gene            complement(12905..13600)
                     /gene="pgl"
                     /locus_tag="AABD07_001207"
     CDS             complement(12905..13600)
                     /gene="pgl"
                     /locus_tag="AABD07_001207"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HFB2355741.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTNHADSNTGLVREYLLKNKAAAAVWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPISLVL
                     NHQGVNCHVFYAE"
     gene            complement(13751..15196)
                     /gene="zwf"
                     /locus_tag="AABD07_001208"
     CDS             complement(13751..15196)
                     /gene="zwf"
                     /locus_tag="AABD07_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HFB2355742.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSGEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQACENLAAIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTIE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFRPLQNHIFDNSQTAPNRLVIELQPNESVRLYTQVKTPGAGNKVEV
                     TPLGVDLGKAVEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWANNT
                     TPPHGYGAHSWGPEAARELLARDGNKWHEEQ"
BASE COUNT         3692 a         4654 c         3962 g         3212 t
ORIGIN      
        1 ttgagggaat gcgaatttcg atttaacttc ggcacaccgt cccggcagct aaaaatcctg
       61 cgggatcggt gtggaattta gggataatct agtacagcca caaaaaatat gcgaaacaaa
      121 ataaaccgca acgacatgga actcggctac acgccttaca accttcgcac cctgcgcaac
      181 cgctgcaaac tgacacaggc cgagttggcg caaatcgtcg gggtgaagca ctacatacag
      241 gtaggccgct gggaagccga acccgatacc gaaacgcggc gggccgatat gccgctggaa
      301 aaatggcggc agttcctcga ttggatagaa aaaacaaacg ccgtctgaaa ccttcagacg
      361 gcatttttta cccaccccca aacctaaaaa ccacaaccaa gccctacacc gcttgccccc
      421 acctcgccgc cgccccaaaa taacctcact ctgttggaag cctgccggaa acggcaaaag
      481 ccgccccgtt ccgccattac ggggcggttt cccacatcaa gacgagacag aaatgaccga
      541 ccgccaaata gacaacctca tcaaacccgc caccatcgcc gacaccgacc ccgcgtccaa
      601 ccgcgtccgc gcacaacacg gcggcattac caccgactgg ctgccctata tcgtcccctt
      661 tgcaggcggc gtgtcagtat ggcgcatccc aagtgtcggc gaagcctgca ccatcttatc
      721 ccctgccggc gaacccgaga acggcgtagt tttatgctgc caagcctccg accgataccc
      781 cgccccgtcc gccgaccccg ccgaaaccgt cgtccgattt catccgctac aaccacaaca
      841 gcggcgcgat ggaattaaaa gccgttacaa gcctgaccat cgacaccccc caaaccacca
      901 taaccggaca cctgaccgtc aaccaaacca ccaccgccca agggctgctg acctaccaaa
      961 atggcatgaa cggccaaggc ggcagcctgt ccgagcacac ccaccccgac gactccggcg
     1021 gtacaacgga aaaaccccaa tgaccgacgc agaaaacgga cgcgggcaag acaccctcgc
     1081 ccacatcgcc caatccatcc gcaacatcct gttcacaaga ataggaacgc ggctgatgcg
     1141 cgaagaatac ggcagtttta ttcccgactt gatcgatatg cccgccggtc acgccgccat
     1201 cgccctcatc caccaagccg ccgttaccgc cctcgcaaga tggaaacccc gcataaccgt
     1261 ccgccgcata caggcagaca ccgccgacct cgccgtcggc aaaatcaaat taaccctaga
     1321 cgtaaccctt gccgacggcg gcgaacgaac ctaccgcatc aaataataaa aacaacagga
     1381 taaacaatgg gaaacagccg attaagccaa ctccccgcgc ccgccgccat cgaagaaacc
     1441 gactttgagg gcatcttcgc gcgcaaaaaa gccgccctca ccgccctatg tcccgaaagc
     1501 atccgcgaaa ccgtcgccca aaccctcgaa ttagaatcag aacccctaac catcgacctg
     1561 caacagcaag cctatcaaga gctgctcgtc cgcaaccgca tcaacgaagc cgtcaaagcc
     1621 aacctcttgg catacgcaca aggcagcgac ctcgaccaca tcgccgccca atacggactt
     1681 tcacgcaaaa ccatccgcgc cgccgacccc gacgcgaacc cgccggttgc cgccgaatac
     1741 gaaaccgacg acgcattccg cgcccgcgtc caagcccatc ccgaaaaata cgccgccggg
     1801 ccgcgcaccg catacgaagc ccacgccatc gacgcacacc cccaaatcac acacgcccgc
     1861 gccgtgcgcc gcgccgccgg cacggtggag gtttacatca aaacccaaag cggcacgccc
     1921 gacgaaacca ttttgaccgc cgcgcgcgaa tacctgtccg ccgaaacacg ccgccccctt
     1981 tgcgacaacg tgcaagtaac cgccgcccaa cccaaagacg cggcagtaga gtattccgcc
     2041 gaataccacc ccgccgccaa tattcaagcc gaacggcaga ccgcctgcga agccttggat
     2101 aacctatggc ggcaaaacgc ccacatcggc gcatccgtcg ccctgtctaa aatcatcggc
     2161 gcgttagaca cccccggcgt gaaaaaaaat cacactgcac agccccgctg ccgacatcga
     2221 atgcggcaac ggcgaataca tccgaatcac gtccacgctc gagcgcgaat aaatgaacag
     2281 caccgtcccc gcgaacaaca gccccctgca acacgcactg gcaaagctga cagaacgcga
     2341 aactgccgcc gtctcccgcc aactcgaccc cggattttta ccctttcacg ccttcgcaag
     2401 aagcatcggc acggaagagg gctgggactt tgccgaaacc gacgaagccc gccgcaacct
     2461 catcgcaggc tttgccgaaa tccacgcccg aaaaggcacg ccgtacgcca tccgcgccct
     2521 cttccccatc ttgcggctgg gcgaaatcca aattatcgaa cgcgacggcg agttcaagtg
     2581 ggacggctcg gtcttgttcg acggcagccg cacattcggc aggcgcaagg gtgactgggc
     2641 ggaataccgc attgtcttaa cgcgccccgt cagcatccgc caaaccgccc gcatccgcgc
     2701 catgttggcg gaaatcgccc ccttgcggtg cgaacttacc gcgctcgact accgcaacca
     2761 tccccaccgc tggaacggca aaatccgctt taacggcgaa tacggtttcg gcacgacata
     2821 acgcgccccc gaaaatcaac aaacaaaagg aagccccaaa atggcaaacg caaccgaaca
     2881 aaaccaattc gaccaagccg tccgcctcat cgaatccggc gacagcgtcg tcggcccagg
     2941 cgcgcccgtc aaccaaccac tgcaagccct cgccaaccgc acccttttgc tcaaaaacca
     3001 aaccgaagcc cttcagacgg catccgacac caaagccgca ccatcgcact gggcgcgccc
     3061 gggcaaatca ccgcaacaag ccaaaacacc gtcccaaaaa acggccacac ccacgccatc
     3121 gacaccgcac gcaccgaccg cgccggcatc gtccgattag acaatgccat tagcgaagcc
     3181 gaagacaccg ccgccacccc caaagccgtc aaaaccgcgc tcgaccaagc ccgcgccgcc
     3241 gccgcgaccg ccgacctcaa agtctccctc tccgacaacc aaaccgttac cggccaaaaa
     3301 accgttaccg gccaaaaaac ctttaccgcc gaaacacaat tccaaagcgg catccggctg
     3361 tccgccaacc cgacgcactg aaacggcggc tacaaagcct atatcggcgc ggataacgaa
     3421 aacgcccaca tcgtcttcgg cgacgacacc ctgcgcctgc acggcgcaaa taaccgcatt
     3481 tcctacaaca accacgacat cttccacaaa gccaacaaac cgcgtttcaa cgaagacatc
     3541 gaaggcaaac cgaacacgct gtccggctac ggcatcggca acttcaaagt cgaaacattc
     3601 cggggcgatt tgaacagcct caaaaccgac ggcgtctatt ccctgccgac ggcggtcggc
     3661 agctcgaacc tgcccgttga aaacaccgcc tgccatatcc aagtcatcgc cggcacgcaa
     3721 cccggctggt gcaggcagtt gggctatccc gcctacacgt ccgacgtgta cgaacgctac
     3781 cagaccagca gcgcaaacga cgactggagc gcgtggaaaa aactcaattc ggaaggcatc
     3841 cccgccggcg cgatcgtgtc ctttcccaaa gccgtccgaa accccgcagg ctatctcaaa
     3901 gccgacggca cgatctttgc acaaaacacc ttccccgacc tttaccgcgc cctgggcaac
     3961 acaaacaaac tgcccgacct gacccgtacc gacatcggca tcaccgcgtg gtttccgtcc
     4021 gaccaaatcc agacgggctg gctggcgttt gacgacatcc gaaagcgcgt aaccgaatcg
     4081 gcttatcccg aactttaccg cctgctgacc gaaaaatacg gacgcatcca aaacgtcccg
     4141 caggcggaag accgctttat ccgcaacgcg ggcaacggct tggcggtcgg aacgaagcag
     4201 gaagacgaaa tcaaacggca cgtccacaaa gtattttcac actgggcaaa ccacccagac
     4261 gccgccgccg tcggttacga agaccgcaat gaaaggcaaa gaagcgcgct cgtatcgact
     4321 tggacggacg gcgacttaaa cgacaacggc tttttaaccc cgcgattgga cagcaaaatg
     4381 gcaacgggcg gcgcagaaaa ccgccccaaa gccctggttt taaaactgtg catcaaagcc
     4441 gccgacacct tgggcgaagc cgtgttccgg ataaagtccc acggcgaaac cgccaacgtc
     4501 ggcgcactgg acgcgtcaag gctggcgcaa ggtttgcagg aaaaagccga ccgcgaccac
     4561 acccacacca ccgcccaaat ccaagggctg gacgaaaaaa tcagcgccgc cgttgccgcg
     4621 caattcacac gccaaaccat cggcggcgtg gatattgtca gattccccga cggcacaatg
     4681 atacagaccg gcagttacag gtttgcaaga ggcggcagcc ccataggaaa cgaagttgtc
     4741 ttccccatcg cctttgccga cggcaacgtc aaatgcttcg tatccgaacg ccattcggga
     4801 cgcgtcaacg gcgaaaggca acacaactgg ctgtttatcc gcgcaaaaaa ccacgccgcc
     4861 gccattatta ccaactggta cgaaagcagt tgcgactgga tggccatcgg caaatccgcc
     4921 tcgggaaacg ccgccagccc caccccgata gtccccgaaa tacctgaaat cgatgaagaa
     4981 ccgcaaagag agagtggaag atcatcaacc ggactccgaa acccccgccg ccaccgaggc
     5041 ctcgacttcc ccgtggggtc gtaagactag cgggcggcag ggcaggctgt agagacgggc
     5101 ttcagcccac cgatccaagc aatccgaccg aaaccggccg cgccgccaat cctgcgaaac
     5161 ctatgccccg ccaatcctgc cactcttcgc cattcccgcg aaagcgggaa tccggaaccc
     5221 aaacgcggca ggaatctatc ggaaagaata acccgaccgc cgtcattccc gcgcaggctg
     5281 gaatccagac ccacaacgtt aaggcggttt atcagaaaaa accgaaaccg aacgccctag
     5341 atttccgcct gcgcgggaat gacgaagagt tggggagtga cgaaaggcgg gaacaaccgc
     5401 gcaaaaagcc gccgactcct tcagacggca tcggcaataa aaaccgcacg gccgaaaccg
     5461 cgcgggaaag gatagccggg cgcgcccgat aagcagcggc cgcagggtta agtccttgca
     5521 cctgttttca tcgaagacaa aggcggttcg ggaaataagg gcgcaatatc aaaagttttg
     5581 cgttgcctga tttgccacaa atcataaccg gcctgcatat tcagccaaaa atcaggcgaa
     5641 gtgttgagca gttggcttaa acgaaccgcc atctcgggcg taatcgaaga ttgggcgttg
     5701 acaatgcgcg ataaggcaac ccggctgaca cccaggcgtt tcgctatatc ggtaatgctt
     5761 gcgccgttaa tatactcttt taaaacaagg cccgggtggg caggattgtg cattttcata
     5821 ttattcctag tgataatcct gataatcgac aacttcgaca ttgccgtcgt tgaaacgaaa
     5881 agtcaaacgc caatttccgt tgactttgaa ccgcccaatg tcccgacaaa ctgcccttga
     5941 ggggatgaag attccaactc ggcacagcca tatccgaagg cgtttgcgcg gcattcagcg
     6001 cggttagaag cagattcagt ttgacggaat gcccggcttg gatgcccgat agcgagcctg
     6061 ttttaaaaaa gcgttcaagc cctttgtgtt tgaaagaaac aatcatcatc ccaccccgtc
     6121 tgtatcgcca aaggatacaa aacttttatt tgattgcaaa gcgacgatat acaaaaaagg
     6181 aaaccccgaa atgaccatct atttcaaaaa cggcttttac gacgacacat tgggcagcgt
     6241 ccccgaaggc gcggttgccg tcggcggcga agagtacgcc gccctcttcg caggacaggc
     6301 gcagggcggg caaattgccg ccgattccga cggccgcccc gttttaaccc cgccgcgccc
     6361 gtccgagtac cacgaatggg acggcaaaaa atggaaaatc agcaaagccg ccgcccgttt
     6421 cgccaactcc cgtttcgcca aacaaaaaac cgccttggca ttcagcctcg cggaaaaggc
     6481 ggacgaactc aaaacagcct cttggcgggc tatccccaag tggaaatcga cagcttttac
     6541 aggcaggaaa aagaaaccct cgcgtggcag gcggacaacg acgccccgac cccgatgctg
     6601 gcgcaaatcg ccgccgcaag gggcatagaa ttggacgttt tgattggaaa ggttgtcgaa
     6661 aaacccgccc gcctggccgt tgccgtcgac gcgattatcg gaaagcggca gcaacttgaa
     6721 gatagattaa ataccatcga aaccgcgcca gcattagatg cgttagaaag ggaaatcaaa
     6781 gaatgggcgc taaacgtcgg ctgagagaat atatttatca tctactagtg gccatagacc
     6841 aactgttcaa cgctataacc ggcggcgcgg cagacgaaac cctctcaagt cgcacctatc
     6901 gcggcgcgcg gctcgcccaa caacccaaaa cccgctggaa gattttatag tggattaaca
     6961 aaaatcagga caaggcgacg aagccgcaga cagtacaaat agtacggcaa ggcgaggtaa
     7021 cgccgtaccg gtttttgtta atccactata tataccctga tcaacggcgt atttttcgac
     7081 cgccaccact gccggcaggc gtatatcagc taactgaaag gcaggcagca cgacgcgcgg
     7141 ttcaaccaaa gccgcgccgc caatgaaagg gatacgcggt aaaattgccg ccgcgccgca
     7201 ttcagacggc atcggcaata aaaaagcccg aaaaaatcgg gctgaaagtt aaggctgcat
     7261 cgcctttaag gcggctttcg ccaaaaaacc gctcgggttt catgacgggc ggcagtgcag
     7321 gcatcgacac ggttgaggat atgttgcggc caactgacgt taaaccgcac ctgtccggtt
     7381 aatgcggcat cgtccgcttc aaccatcgtc cacaacaccg catcggcata atcgggattg
     7441 tcccgattaa cctctatgct ttgcgcctcg ggaatcggca ggttttcctg caaaagccct
     7501 tcgagatgga acattgcggc ggctttggca tcggcaagcg cgtcggcaac cgtatcgccg
     7561 acaggatagc agcccggcag atcgggaata atcacgcccc agttgctttg atcggggtct
     7621 tggaacagca cggcgggata gtaaatcatt acttcctttc tcggatatgc ggtatcggca
     7681 aagtccaaac gcaacgaagg ggatttaaaa acgacaaaaa cgcaaaagcc gccgacattc
     7741 ccgcatccaa gtttcagtca atcagataac cttggatttc tttggttttc gcattgattt
     7801 ctctggtacg gcagtcagat tgtgccaccc cgtattcgtc gccgtcggcg catttggcat
     7861 ccaaaccgct ttgccagttg cggtactggg gcataacggt ttcggcaata tcggcgggca
     7921 gtgcctgaac cgcgctgttc agagccgctt tggcagttct ttcttgtcct cttccctgac
     7981 catttcgtcg ataagggctt ttttacggtt gtgcagctct tccaagcgtg cttcggtttc
     8041 tgccgtttta cacgccaact cactgacttt tatgccgttt ggcgtttcac cttcggcttt
     8101 cgcattgttg gcacagatct tgtccatacc gcttttccat gttttctgcg aggcttgcag
     8161 cttattctgt acagtttgag gcaatccttt ccaaaactgc tcgaactcgc tgcgcgacag
     8221 cttgtagcgt tcttcccatt cggatacgcg ggcggcttcc tgctcccgac ccaatgcctc
     8281 ctgcgccgcc gcttcttctg cctccctcgc ttcctgcgcg gtggcttctg ccgcttcaag
     8341 tttttcgttc ctttgtttcg ctttgtccaa cggctcttta atcagtgcca tagacaccag
     8401 ctcgctgagc ggatggatga tatcgtgtgc ctgactgagt tcggcaaaga ttttgctttt
     8461 gtcgtctgtc ggctggacgc tgtaagaaat agttttgaca taatacgcgc cttctttgcg
     8521 gtagtagggt tcaaaaaagt cgggcgtttt cttatagctg ttgcctatag attggttggc
     8581 ggcgacggca taatcgacaa catcgtcggg cacgtccagt tttaacgcgg cttcacattt
     8641 gagtttgctg gacgtgtcgg ttttctcggt agttcggact tcatcgacgg ttatgcccaa
     8701 acgttcgacc attctgcgga tatgcgatat gccgatatcg gcaaatgctt ggtctttgaa
     8761 tgcgtcgtcg tcaaaagttt tgacggtttc accttcgaca ttgtcgcgga ccagtttgac
     8821 caaaatctct ttagtctctt cgcttccgca ggaaatttcc tttccggaaa acgggttgcc
     8881 tattcccaaa cggtcgcagc ccgacaaaat cagcatactt gccaatgcca gtgcgggtaa
     8941 attttttttc attagatttc ctttgccgtc caaacacgga ctgtctgttg cgtatttcca
     9001 cacacgctac ggcacttgaa gtacatggct gcggaacata tatgtttaaa tttatgcaaa
     9061 ccgccatatc gggattgcac acgccctgca aatttaccga cggttttcct gttcgataaa
     9121 aatgccgtct gaaacggtcg gcgttcagac ggcatttttc cgcaggtttt atttgcggtt
     9181 ggtctgcagg tagaggttaa tcaggcgttc ggtcgagctg tcgtgttttt gaggttcggt
     9241 ttcgcctgtc agttcgccca aaatggtttt agccagttgt ttgccgagtt ccacgcccca
     9301 ctggtcgaag ctgttgatgc cccaaatgat gccttggacg aaggttttgt gttcgtacat
     9361 ggcaatcagg ctgcccatat tgcgggggtt gaccttatcc atcaggatga ggttggtcgg
     9421 gcggttgccg gagaaggttt tgtgcggaac cagctcttcg atgcgcgcct catccatacc
     9481 ctgcgctttg agttcggcgc ggacttcgtc gggggttttg ccgcacataa aggcttctgc
     9541 ttgtgcaaag acgttggcaa gcaggatttc gtggtgtccg ggcaggttgc tgcgtttttc
     9601 aagcgaggca atcaggtcga tgggggtgat gtgcgtgcct tgatgcagca gttggaagaa
     9661 ggcgtgctga ccgttaatgc ccgtttctcc ccagataatc ggcgaggttt cgtgtccgac
     9721 tgctttgccg tccaacgtaa cctgtttgcc gttgctttcc atatcgagct gctggatgaa
     9781 tttgggcagg cggtgcaaat gttggtcgta aggcgcgatg acgtggctgc cgccaccgta
     9841 gtagttgata taccagatgc cgatgagggc gaggatgacg ggcaggttgc gctcgagcgg
     9901 ggtgttgatg aagtgttggt ccatcaggtg cgcgccgttg agcatttcga tgaagttttc
     9961 ttcgccgaga tacagcataa tcggcaatcc gatggcggac cacaggctgt accgaccgcc
    10021 gacccaatcc caaaattcaa acatattggc gatgtcgatg ccgaattcgg cgacggcttt
    10081 tcgattggtg gaaacggcgg cgaagtgttt ggcaacggct tcttcgtcac ccgcatgatt
    10141 caaaaaccat tcgcgcgcgg ttagcgcgtt ggtcagcgtt tcctgcgtgg taaatgtttt
    10201 ggaggcgatg atgaacagcg tggtttccgg gtggactttg gacaatacgt cgcgcagttg
    10261 cgagccgtcc acgttggaga cgaagtgcat attgaggcgc ggatgaccga aaggtttgag
    10321 cgcggtacac atcgtcagcg ggcccaaatc cgatccgccg atgccgatgt tgacaacgtc
    10381 ggtaatgact tggttggtat agcccagcca gcttccgctg cggacttcgt gtgcaaattc
    10441 gcccatacgt tgcaaaacgc ggttgacttt gggcatcaca tcttcaccgt caaccataat
    10501 cggcgaattg gtgcggttgc gaagggcgac atgcaggacg gcgcggtttt cggtggtatt
    10561 gattttttcg ccgtggaaca tctgccgcat ccgctccggc acgcctgctt cacgcgccaa
    10621 ctcgaacagt agggacatgg tttcgtcgtt gatgcggttt ttggagtagt ccagcgtcag
    10681 tccgccgact tgcagccagt agcgttccgc ccgctgcggg tcttgctcga acatttcgcg
    10741 catatgcaat gttttgctgt cgtcaaagtg gttccacaat tttgaccagg ccggtaagtc
    10801 gtgaaggtgt ttcatctgta tgctcccgat tgaggttttc cgtgacgggg ggcgtttccg
    10861 cacatcgatg cgcacataag gcgcaaccct gcgtaccgcc ccgatttgga aggggttgcg
    10921 gcaaacccga accctgccgc cttaaagggc ggggtttccg ccattaagga aattctgata
    10981 aaaggcttgc cggagcctgt ccggccgttc agacggcatt ggcgggatgc cgtctgaaca
    11041 tcagtctttg tcgtaatcga tgtgcttgtt gtgtatgctt tttttgcttt tctgcaattg
    11101 caggctggca gcatcgccca agcgcagggc aagtccgatg gcgagaatat caatgacggc
    11161 aagctgcaag aggcgggaaa ccatgggcgt gtagagttcg gcgttttcct gtgtggcaac
    11221 gctcaacacg cagtcggcaa gttgcgccag aggcgaatcg ttgcgggtca gtgcgatgac
    11281 ggacgcgccg ttttctttgg cgatgctgac cgcatccaaa agttcgatag acgaacccgt
    11341 gttggaaatg gcaaccaaaa catcctgatc gctcaaaacg gatgccgcca tcagttgcgt
    11401 gtgcgtatcg acataggcga cggtggacat gccgaaacgg aaaaatttgt gctgcgcgtc
    11461 ctgtgccaca atgccggaat tgcccacgcc gtaaaattcg acgcggcggg cgtgcatcag
    11521 ggtggcgatg ccgttttcga gttcggattc ttttaagaac ctcctctccc ccaacaaggc
    11581 tgcggcggcg ttgcccaaca ctttttcaac cacattcgcc atatcgtcgt cggcattgag
    11641 ttcttcgtgg acataaggca taccttcgtg cccgatgctg gcggacaggg agagcttgaa
    11701 ttccggcagc cccttataac cgaggctgcg gcagaaccgg atgacggtcg gctggctgac
    11761 cgaggcgcgg tcggcgattt cggcgacggc ggcgtggaca aaccacttgg gttctgccaa
    11821 ggcgcattcg gcaactttgc gttccgcacc ggacaggtcg gccagtgatt cgctgatttt
    11881 gcttaacata atgatatgcc cttcgataat gcggccctgc tgcaagggct gccgtggtta
    11941 gacgtttttc aggtggttgc cgagcgccgc cgccgcgccg gcaatacccg gaaattcgct
    12001 caagacgaca taaacgggaa tcgcggcaag gtaggcttca aaacgccctt tgttttcaaa
    12061 gcggctgcgg aagggggagg ttttgaagta atccaacatt cgcgggataa tgccgccgca
    12121 caaatacacg cccccgcgcg cgcccaaagt cagggcgagg ttggaagcga ccgtgcccag
    12181 catcgcgcaa aaaatgtcca atgcctgccg gcacaggggc gattcgcaat ttaatgcctt
    12241 ttcggtgatt tcagacggca tcagttttgc cggttcggct ttctgcttgg ccgccagcgt
    12301 ttcataaatc aggctcaaac ctgcgccgct gaggaaacgt tcggcggaaa cgtggcggta
    12361 tttgtttttg gcgtactgcc aaatcaacac ttccatatcg tcaaacggcg ggaaactggt
    12421 atgcccgccc tcgcccgcca acgccaccca gcctgcgggg ctgtgcacca atccgctcac
    12481 gcccaagccg gtaccggggc cgataacggc cttgggggcg aattcgacag gcttttgccc
    12541 gcctacctgc atcaggtctt tgcttgaagt ctgcgttacc gccaatgcct gcgcggtaaa
    12601 gtcgttcaaa aggatgaggg tgtccagccc caaagcctga cgggtggttt cgatggaaaa
    12661 cgcccaatgg tggttggtca tctgcaccca gtcgcccaaa atcgggttgg cgatggcaaa
    12721 tgccgcgtgc cgtacgcccg ttgcaccact ttggttcaga taggcacgca ccgcgtcggt
    12781 aaccgtgtcg tattccttac acggcaggac ggcgactttc tcaatcacgc acggcgcggt
    12841 ttccaatgcg aaacgggcgt ttgtgccgcc gatgtcggca accagcctcg ggtaatcggc
    12901 gtgtttattc ggcgtagaag acatggcagt tcactccttg atggttcaaa acgaggctga
    12961 tcggatattc gcggttttcg ccttgtgcgg cttggtcgaa cacggctttt ttctcttcgc
    13021 cctgtatcgc caaaaataca tgcccagtat gggcaatcgc atccaaagtc atgctgatgc
    13081 gctcgtgcgg cgcggtaacg ggcgtagtat gcaccagcgc gacacctgcc gaaccgtcga
    13141 ttgccgtctg aaactgcgga gcttttggga aaatcgaagc cgtatgcccg tcgtttccca
    13201 tacccaaaat caaaacatcg ggctgcttgt aatgtttcag cgcataatcg acaacagcat
    13261 cgggatgtaa ttcggtttca gtttttccgt cttccaccat aggaatccac actgccgcag
    13321 cggctttgtt ctttaacagg tattcgcgca ccagaccggt attgctgtcg gcgtggttgg
    13381 tcggcacgat gcgttcatct gccaaggtaa ttccgacgtt tttccaatcc aaatcttttt
    13441 gcgacagggc gttgaaaaat gcaatcggcg aacgtccgcc ggaaactgcc aacaccgcac
    13501 cgcccttctc gtccagtgcg ccctgcaaag catccgccac tgcgtcagcc aaagactgcg
    13561 ccgcttctgc cgcattttcg tattcgtgcc aaacaaacat atttgtgtcc ttttgtgatt
    13621 tcagacggca tatcccgtta cagggcggct gccgggcaat ggcttagccg cttccgcctc
    13681 gaagcgggac tgctttttct gcccgccctc cttcagacgg cattgcgaac ccgatgccgt
    13741 ctgaagcgca ttactgttct tcgtgccact tgttgccgtc gcgcgccaac agttcgcggg
    13801 cggcttcagg gccccaagag tgtgcgccgt aaccgtgcgg cggcgtggtg ttatttgccc
    13861 agttttccaa aatcggcatc acatattccc acgcggcttc gagttcgtcg cggcggttga
    13921 acaaagcgag tttgccgtta atcacatcca acagcaggcg ttcgtaagcc tcggcgcggc
    13981 ggccttcaac ggccttgccc aaatccacgc ccaaaggcgt tacttccact ttgttgcccg
    14041 cacccggggt tttcacctgc gtgtaaaggc ggacggattc attcggttga agctcgataa
    14101 ccaaacggtt cggcgcggtt tggctgttgt cgaaaatatg gttttgcagc gggcggaagt
    14161 tcaaaacgat ttccgccact ttgcccgcca tgcgtttgcc ggtacgcagg tagaagggaa
    14221 cgcccttcca gcgttcgttt tcgatttcgg ctttaatggc gacgtaggtt tcggtaaagc
    14281 tgtcttgcgg aacgttgatt tcttcaagat agccgttcat gcctttggca gcggtatatt
    14341 gtccgcgcac gacattttca ttgacagatt cgatggtcag cggcttcaat gacttgatga
    14401 ctttgacttt ttcatcgcgc accgcgtcgg catccaagct ggcgggggct tccatcgcag
    14461 tcatgcacag catctgcatc aaatggtttt gcaccatatc gcgcaacgcg ccggtaatgt
    14521 cgtaaaactc gccgcgctct tccacaccga gctgttcggc gatggtcagc tgcacgcttt
    14581 cgatgtattt attgttccac agcggctcga acattacatt ggcaaaacgc agcgcaagca
    14641 ggttttgcag gctttctttg ccaaggtagt ggtcgatgcg gtaaatttgc ccttctttga
    14701 aataacgcgc cacatcggta ttgatttgtt gggaagaagc caaatccgta cccagcggtt
    14761 tttccaaaac cacgcgcaca ttgtcggcat tcaaaccgat cgcagcaagg ttttcgcagg
    14821 cttgcgcgaa gaatttcggc gcggtggaca gatagatgac gacgttgtcg gtttctttgc
    14881 gtgctttgac caaatcgccc aaagcggcaa aatcgtccgg ctgcgtaaca tcgactttga
    14941 gatatgcgag acgttcaaca aacgaagccc acgcctcacc ggaaaaattt tctttcacat
    15001 ggattttgga actggtttcc accttcgcca gaaaaccttc ggtatccaac tcgctgcggc
    15061 tgacccccaa aatacgccct tcgggatgaa gcagaccggc aacatgcgcc tgatacaggc
    15121 agggcaaaag tttgcgcatt gccaaatcgc cggtcgcacc gaacaacacc aaatcaaaat
    15181 ttgtctgtgt actcatcgca ttatctcgtc aggaaaggat tttttcgatg ccgtctgaaa
    15241 cctgtttttt ccatcacgca gcatcgcaat atcggaaaca aaggcaggcg gcataatgag
    15301 tagtaatact acacaccgct acactttttg tctattccca tttttacaat ttatttgacc
    15361 tagtccaaaa atcaggcagg tttcccctat tccgttacaa caatcagaaa attctgcgat
    15421 ttaaatcaaa tttcttttca atgtctgatt ttttgtaaca aaattacaaa ttttgtacta
    15481 taatagcacc cgcttcccac tttcagacgg cgtacctttt
//
LOCUS       DAWXHA010000052        15131 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.052, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000052 DAWXHA010000000
VERSION     DAWXHA010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15131
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.052"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            212..1582
                     /locus_tag="AABD07_001209"
     CDS             212..1582
                     /locus_tag="AABD07_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFB2355743.1"
                     /translation="MSSPSNTNRQTWSSRLTYILTVAGATVGFGATWRFPYLVGENGG
                     GAYVFLFCIAMLVIGIPMILVENVIGRRKGVNALDAFGGPMNGKPVAKIWKLVGRMGL
                     LGAFGIMAYYMVLGGWVISYIVNIIGGNLNISSPVDGVVTKGFFTEHIENSPWEIAFY
                     TLLFVAVNQWILVKGVIGGIEKTAKYLMPLLFLFLIAMVVRNVTLPGAMEGVAFYLKP
                     DFSKITAELFVFVLGQVFFALSLGFGVMITLSSYLDKNENLVQTAVITAITNTIIAVL
                     AGFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSHMWAGPVFAVIFFSLLLIAALTTSLT
                     IYEVLITTIQEKTKIRRTAAITIVLSVIFVFGNIPSILSYGPWKDVSVFGKNIFDAFD
                     YISGNILFMLTALGSALFVGFVMKDEAKEELLYKGNHTTVNIWFAYVKYLVPLVILLI
                     FVSNLF"
     gene            1815..2471
                     /locus_tag="AABD07_001210"
     CDS             1815..2471
                     /locus_tag="AABD07_001210"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HFB2355744.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVEWHDEENVSALAKKLPAVFSGNRILLDGEDVSDGIRTEAIGMGASAVAQWP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGFTFERILSDIETRDEADRNRKVAPLKQQSDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            2624..4309
                     /gene="rpsA"
                     /locus_tag="AABD07_001211"
     CDS             2624..4309
                     /gene="rpsA"
                     /locus_tag="AABD07_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HFB2355745.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QATRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVVALSDEVEGYLLASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            4320..4634
                     /locus_tag="AABD07_001212"
     CDS             4320..4634
                     /locus_tag="AABD07_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HFB2355746.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(4830..5237)
                     /locus_tag="AABD07_001213"
     CDS             complement(4830..5237)
                     /locus_tag="AABD07_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HFB2355747.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLYLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            5360..6497
                     /locus_tag="AABD07_001214"
                     /pseudo
     CDS             5360..6497
                     /locus_tag="AABD07_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054862.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
     gene            6506..7333
                     /gene="fghA"
                     /locus_tag="AABD07_001215"
     CDS             6506..7333
                     /gene="fghA"
                     /locus_tag="AABD07_001215"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HFB2355748.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPDNPENQPLG
                     VIYWLSGLTCTEQNFITKSSFRRYAAEHQVVVVAPDTGPRGEQVPNGAAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEEHFPTNGKRSIMGHSMDGHGALVLALRNRE
                     HYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTKDFIETCRAANQPIDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            7863..9014
                     /locus_tag="AABD07_001216"
     CDS             7863..9014
                     /locus_tag="AABD07_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HFB2355749.1"
                     /translation="MNNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHRRLKALKSESNPLKSVAAEITKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSGFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRTIWFDF
                     RALCFSPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
     gene            9073..9498
                     /gene="ndk"
                     /locus_tag="AABD07_001217"
     CDS             9073..9498
                     /gene="ndk"
                     /locus_tag="AABD07_001217"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HFB2355750.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPTEAAEGT
                     IRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR"
     gene            9642..10736
                     /gene="rlmN"
                     /locus_tag="AABD07_001218"
     CDS             9642..10736
                     /gene="rlmN"
                     /locus_tag="AABD07_001218"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HFB2355751.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGVNDKAQHAY
                     ELIELVKDVPCKFNLIPFNPFPNSGYERSSNENIRIFRDILQQAEFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            10739..11500
                     /gene="pilW"
                     /locus_tag="AABD07_001219"
     CDS             10739..11500
                     /gene="pilW"
                     /locus_tag="AABD07_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HFB2355752.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSNPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNVQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            11516..12781
                     /gene="ispG"
                     /locus_tag="AABD07_001220"
                     /gene_synonym="gcpE"
     CDS             11516..12781
                     /gene="ispG"
                     /locus_tag="AABD07_001220"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HFB2355753.1"
                     /translation="MNTLQRRKTHQVLIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLVSSAPKPPEEVMKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVHDLIQVYRE
                     LGSRCVYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGNNIASEFL
                     AIVEEYVKTNYGKNSSKRNKGKVIPIQSL"
     gene            complement(12835..13449)
                     /gene="clpP"
                     /locus_tag="AABD07_001221"
     CDS             complement(12835..13449)
                     /gene="clpP"
                     /locus_tag="AABD07_001221"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HFB2355754.1"
                     /translation="MSFDNHLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQVLENRASLRL"
     gene            complement(13545..14855)
                     /locus_tag="AABD07_001222"
     CDS             complement(13545..14855)
                     /locus_tag="AABD07_001222"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HFB2355755.1"
                     /translation="MSVTVEILENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVDREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVS
                     REVERRVNEQTKESVMNALIKAVELKVPVALVNEEAARLANEMKQNFVNQGMTDAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YADTSRLQAPTSLAVESNVVDFVLGKAKVNKKALSFDEVMGAQA"
BASE COUNT         3986 a         3832 c         3558 g         3755 t
ORIGIN      
        1 ttcacttccg tacaccgatg tagaaaaata acagattaat ctgttcataa actccgattc
       61 ttcctcatcg gtttatactc atcagaaata ttcactgaaa tatatgcatt ttacatggaa
      121 aatcactagg cagttgaaaa acattcagtc aatttctgtt aagaatcacg tgtaaaattt
      181 ccgctttatc tcaatcggac acggtttcaa tatgtcttcc ccttcaaata ccaaccgtca
      241 aacctggtcc agccgtttga cttatatcct taccgttgcc ggcgcgactg tcggtttcgg
      301 cgcgacgtgg cgtttcccgt atttggtcgg tgaaaacggc ggcggcgcgt atgtgttttt
      361 attctgtatc gcgatgctgg ttatcggcat cccgatgatt ttggtggaaa acgtcatcgg
      421 acggcgcaaa ggcgtgaacg cgctggatgc gttcggcggc ccgatgaacg gcaaacctgt
      481 tgccaaaatt tggaaactgg tcggccggat ggggctgctc ggcgcgttcg gcatcatggc
      541 ttattatatg gtactcggtg gctgggtaat cagctatatc gttaatatta ttggaggaaa
      601 tttgaatatt tccagccccg tcgacggtgt ggttacaaaa ggcttcttta ccgaacacat
      661 tgaaaacagc ccttgggaaa ttgcgtttta tacgctgctt tttgtcgccg tgaaccaatg
      721 gattttggtc aaaggcgtta tcggcggcat tgaaaaaacg gcgaaatacc tgatgcctct
      781 gctgtttttg ttcctaatcg cgatggtcgt ccgcaacgtt acccttccgg gcgcaatgga
      841 aggggttgct ttctatctga aacctgattt cagcaagatt accgccgaac tgttcgtctt
      901 cgttttggga caggtatttt ttgccctgag cctgggtttc ggcgtgatga ttaccttatc
      961 cagctatctg gataaaaacg aaaatctggt tcagacggca gttatcacgg caattaccaa
     1021 taccatcatc gctgtacttg cgggctttat gattttcccg tcgctcttca gcttcggcgt
     1081 cgcgcccaat tccggcccga ctttggtgtt ccaaagttta ccgattgtgt tctcacatat
     1141 gtgggcagga cctgtgttcg ccgtcatttt cttctctctg ctcctgattg ccgcgttgac
     1201 aacttcgctg acgatttatg aagtgttgat tacgaccatt caggaaaaaa ccaaaatccg
     1261 ccgtaccgcc gcaatcacga ttgtattgtc cgtcatcttc gttttcggca acatcccgtc
     1321 tattttgagc tatggcccgt ggaaagacgt ttccgtgttc ggcaaaaata ttttcgatgc
     1381 cttcgactac atcagcggca acatcttgtt tatgctgacc gcgctcggtt ccgcattgtt
     1441 tgtcggtttt gtgatgaagg acgaagcgaa ggaagaattg ctttataaag gcaaccatac
     1501 gacggtcaat atttggtttg cctatgtgaa ataccttgtg ccgctggtga ttctgctgat
     1561 tttcgtcagc aacctgttct aatccgcagc aatcaatgcc gtctgaaggt catacctctt
     1621 tcagacggca ttgcattgat gcccgccacg ccggaatccg aaccggcttg ccggcttctg
     1681 tcggacgctt tccgggcagg cggcgttccg tctgcttaga caatcgtcct ttaaaacagg
     1741 tagaatccgc cccaacggga aacacaccct tcagacggca aaacccatac cccaaaccat
     1801 caggaatccc ccttatgaac agacaaaaag tcatcgccat cgacggtccg ggcgcatcgg
     1861 gcaaaggcac ggtcgccgcc cgcgttgccg ccgcattggg atacgattat ctcgataccg
     1921 gcgcgctcta ccgcctgacc gccctatatg cacaaaaaca aggcgtggaa tggcacgatg
     1981 aagaaaacgt ttccgcactt gccaaaaaac tgcccgccgt attttcaggc aaccgcatcc
     2041 tacttgatgg cgaagacgtt tcagacggca tccggacaga agccatcggt atgggcgcat
     2101 ccgcagttgc gcaatggccc aaagtccgcg ccgcactgct gcaacgccaa cgcgattttc
     2161 tgaccgaaaa aggactggtt gccgacggac gggacaccgg atcggtcgtc ttcccccaag
     2221 ccgaactcaa aatttttctg acagccgaat ctaaaatccg tgccgaacgc cgcgccaaac
     2281 aaatcggcat tccctgcgaa ggtttcacat tcgagcgcat cctgtccgac atcgagacca
     2341 gagacgaagc agaccgaaac cgcaaggttg cccccctgaa acaacagtcc gatgccctgc
     2401 ttttggatac gagccgccta actatagaag aaactgtaaa aaaagtgctt gattggtatc
     2461 gtaaagttta aattttcagg tataatcgcc cgcattgcgc ttcagacagc atgaatttcc
     2521 atgtgccgtc tgaaacctta tttacccgcc tgccgtgcca aggactgcag acacccacca
     2581 acccaacccg caccccttgg cggtgtaccg aaaagagtta tatatgtcta tggaaaattt
     2641 tgctcagctg ttggaagaaa gctttaccct gcaagaaatg aacccgggtg aggtgattac
     2701 cgctgaagta gtggcaatcg accaaaactt cgttaccgta aacgcaggtc tgaaatcaga
     2761 atccctgatc gatgtagctg aattcaaaaa cgctcaaggc gaaattgaag ttaaagtcgg
     2821 cgacttcgtt accgttacca tcgaatccgt cgaaaacggc ttcggcgaaa ccaaactgtc
     2881 ccgcgaaaaa gccaaacgcg cagccgattg gatcgctttg gaagaagcca tggaaaacgg
     2941 caacatcctg tccggcatca tcaacggtaa agtcaaaggc ggcctgaccg ttatgatcag
     3001 cagcatccgc gcattcctgc cgggttcttt ggtcgacgta cgtcccgtta aagacacttc
     3061 ccattttgaa ggcaaagaga tcgaattcaa agtgatcaaa ctggacaaaa aacgcaacaa
     3121 cgtcgttgtt tcccgccgcg ccgttttgga agccactttg ggtgaagaac gcaaagccct
     3181 gctggaaaac ctgcaagaag gctccgtcat caaaggcatc gtcaaaaata tcaccgacta
     3241 cggcgcattc gttgacctgg gcggcatcga cggcctgctg cacatcaccg atttggcatg
     3301 gcgtcgcgtg aaacacccga gcgaagtctt ggaagtcggt caggaagttg aagccaaagt
     3361 attgaaattc gaccaagaaa aacaacgtgt ttccttgggt atgaaacaac tgggcgaaga
     3421 tccttggagc ggtctgaccc gccgttatcc gcaagccacc cgcctgttcg gcaaagtatc
     3481 caacctgacc gactacggcg cattcgtcga aatcgaacaa ggcatcgaag gtttggtaca
     3541 cgtctccgaa atggactgga ccaacaaaaa cgtacacccg agcaaagtcg tacaactggg
     3601 tgacgaagtc gaagtcatga ttttggaaat cgacgaaggc cgccgccgta tctctttggg
     3661 tatgaaacaa tgccaagcca atccttggga agaatttgcc gccaaccaca acaaaggaga
     3721 caaaatctcc ggtgcggtta aatccattac cgatttcggc gtattcgtcg gcctgcccgg
     3781 cggcatcgac ggtctggttc acctgtccga cctgtcttgg accgaatccg gcgaagaagc
     3841 cgtacgcaaa tacaaaaaag gagaagaagt cgaagccgtc gtattggcaa tcgatgtgga
     3901 aaaagaacgc atctccttgg gtatcaaaca actggaaggc gatcctttcg gcaacttcat
     3961 cagcgtgaac gacaaaggtt ctttggttaa aggttccgtg aaatctgttg atgccaaagg
     4021 tgctgttgtt gccctgtctg acgaagtaga aggctacctg cttgcttccg aatttgcagc
     4081 cgaccgcgtt gaagacttga ccaccaaact gaaagaaggc gacgaagttg aagccgtcat
     4141 cgttaccgtt gaccgcaaaa accgcagcat caaactttcc gttaaagcca aagatgccaa
     4201 agaaagccgc gaagcactga actccgtcaa tgccgccgcc aatgcgaatg ccggtaccac
     4261 cagcttgggc gacctgctga aagccaaact ctccggcgaa caagaataag gttgcagaca
     4321 tgacaaagtc tgagttaatg gttcgcttgg cagaagtatt tgccgccaaa aacggcacgc
     4381 atcttctggc aaaagacgta gagtacagcg taaaagtctt ggttgacacc atgacccgat
     4441 cgcttgcccg aggtcaacgc atcgaaatcc gcggtttcgg cagcttcgat ttgaaccatc
     4501 gtcctgcccg catcggtcgc aatcccaaaa ccggcgagcg cgtggaagta cctgaaaaac
     4561 atgtacccca cttcaagcct ggtaaagaat tgcgcgagcg ggtcgacttg gctttaaaag
     4621 aaaatgccaa ttaaacctta gcatcaaaac gccgctggta cgcggcgttt tttctttggt
     4681 ttaacttcat ccgctgcttc aataccttaa gccaagcaag caacggatta gagcgtggat
     4741 tttttaccat tgcttacaat ccgcttttta aacaacaaat tgttgatttc tattacgaac
     4801 aggacaaaat cctgcttatt gcactaaaac taagccgttt caggaatttg cggcaaattt
     4861 acagctttta ccgagcctaa tgctttcgct ttttggtaaa acgccaattt gtattcaagc
     4921 aaatctaaat aacgttttaa ttcggcaatt tgacacttca cattttctat ttgattttca
     4981 aacaaggaaa ggcgttcttc aatggtatcg tcgccaatga cggtacattc cgcaaagcgt
     5041 ttgatgtctt ttaagctcat tcccgtattt ttcaagcatt gcaataagta caaccattgc
     5101 aaatcgttat cggtaaaaca acggttaccg tattcatcac gtccgatatt aggcaacaag
     5161 ccttctttgt cgtaaaagcg taaagtgtgg gcggagatgc ctattttttc ggcagctttg
     5221 gcagtggtat aagtcatttt ccctccctct aaacaaaaaa cggtaaaaaa acacttgcct
     5281 tagagtgaac tctaaaatgt aaactgttgc tatgttgctc aggcaaggct attttgttaa
     5341 tgaattaaga ggaaagacaa tggaaatgaa acaaaccgat tcaaccatca aatctcgtgc
     5401 ggcggtggca ttcgccccta accaaccctt acaaattgtg gaaatcgacg tggaaatgcc
     5461 gcgtaaagac gaggtgttaa ttcgtaacac ccacactggc gtgtgccata ctgatgcatt
     5521 taccttatca ggaagcgatc ctgaaggcgt attccctgtg gtgcttggac acgaaggtgc
     5581 gggtgtggtc gttgctgtgg gcgagggtgt gtcaagcgta aaaccgggta atcacgtcat
     5641 tccgctttac accgcagaat gtggcgaatg tgagttttgc ctctcgggta aaaccaattt
     5701 atgcgtctca gtgcgtgata cacaaggtaa aggcttaatg ccagacggca cgacgcgttt
     5761 ttcttatcaa ggtcagccga tttatcacta tatgggctgt tcgactttca gtgaatattc
     5821 tgttgttgcc gaagtttcac tggcgaaaat caacccgaaa gccaaccacg aacaagtatg
     5881 tttgctcggc tgcggcgtta ccactggtat tggtgcggta cataacacgg caaaagtaca
     5941 agaaggcgat tctgttgccg tgtttggctt gggagcgatt ggtttggctg tggtgcaagg
     6001 tgcgcgtcaa gccaaagccg gtcgcattat cgccattgat accaatcctg caaaattcga
     6061 gttggcaaaa cagtgttggt gcaactgact gtttgagccc gaaagattac gataaaccaa
     6121 tcaaagatgt gttgttagac atcaacaaat ggggcattga ccacaccttt gaatgtatcg
     6181 gcaatgtaaa cgtaatgcgt caggcattag aaagtgcaca ccgaggttgg ggacaatcca
     6241 tcatcatcgg cgtagcggat gcaggacaag aaatttcaac gcgtccgttc caatcggtaa
     6301 caggccgtgt ttggaaaggc tcggcatttg gtggtgttaa aggccgctcc gagcttccga
     6361 aaatggtgga ggattcaatg aaaggcgata tccaattaga accatttgtg acccatgcaa
     6421 tgacccttga tcaaatcaat gaagcctttg agttaatgca cgaaggtaaa tcgatccgcg
     6481 ctgttattca ttactaaggt ccacgatgaa actgattgaa caacatcaaa tttttggtgg
     6541 ttcgcaacaa gtttgggcgc atcatgccca aacgcttcaa tgcgaaatga aatttgccgt
     6601 ctatttgccg gataatccgg aaaatcaacc gcttggtgtg atttattggc tttccggctt
     6661 gacgtgtacg gaacaaaatt tcattaccaa atcgagcttc cggcgttatg cggcagaaca
     6721 tcaagtggtt gtggtcgccc ccgataccgg ccctcgcgga gagcaagtgc cgaacggtgc
     6781 cgcttatgat ttaggacagg gggcaggctt ttatttgaat gcgaccgaac agccttgggc
     6841 ggcgaattat caaatgtatg attacatttt gaacgagttg ccccgtctga ttgaggagca
     6901 ttttcctacc aacggcaaac gttccattat ggggcattcg atggacggac acggcgcatt
     6961 ggtattggca ctacggaatc gggaacatta tcaaagtgtt tctgcctttt cgcctatttt
     7021 atcgccaagc ctcgtaccgt ggggagaaaa agcctttact gcttatttag ggaaagaccg
     7081 tgaaaaatgg cagcaatatg atgctaactc actcattcaa caaggctata aagtgcaagg
     7141 tatgcgtatc gatcagggct tggaagatga gtttttgccg acacaattgc gtaccaaaga
     7201 ttttatcgaa acctgtcgtg cggcaaatca gccaatcgat gtgcgtttcc ataaaggata
     7261 cgatcacagc tattacttca tcgccagttt tattggtgag catatcgctt atcacgccgc
     7321 atttttgaag taagtcaaag agcggtcagt tttcaaagca gtttggaata gccggcacga
     7381 gggcggtaag aagtgccggc ataaacgtat gccgcctgaa ccggaaggag ccggccctac
     7441 ggattaccaa accctgccct tgatttgatt agtatgattt ttaagcttaa accctgattg
     7501 atcaaacatt aaaatcgccc gtatttccta cttcactttc gggcttcgta ttattcgttg
     7561 ccgaatttgc ataagcaacc tgttcctgtt gtgttttcgc cccctccaag ctgacggtgg
     7621 cgtaacagct tcgcgattca ccatctgttt catttgtcct ccttcaatat taaaacgcag
     7681 cctgaaataa aaggcatttt ggctcatatc tgcaccatat taaaacgccg cctttgctta
     7741 tacccccttt gtgcgcgtca ttattctttt ccacgggaaa cgccaagttt gaaggaaatc
     7801 atttataata ccagcggtaa gcattttctt tcttagccgc aagaagtata acaaggttaa
     7861 atatgaataa tagagaccaa ctttttaaag ccccgccgtt tgaaaaccac agcccgctga
     7921 cctggtatca ggctgcctca caactgccca acttcatccg cgacgacgca caggcggccg
     7981 ccatcgaaca ccttgaccgg ctttggaccg aattgatgat gttcaaacgc aaaagaaacc
     8041 gttttttagg caggagtttg cgttccccgc aagttcccaa agggctttat ttctatggcg
     8101 gagtcggacg cggcaagagc tttctgatgg acgctttttt cggctgcctc ccttaccgcc
     8161 gcaaacgccg cgtccacttt catgccttta tggcggaaat ccaccggcgg ctgaaagccc
     8221 tgaaaagcga aagcaacccg ttgaaatccg ttgccgccga gattaccaaa gaaacccgag
     8281 tattgtgttt tgacgaattt catgtcagcg atattgcgga tgcaatgatt ttaggccgtc
     8341 tgctggaaaa cctgcttaac gagggcgttg ttttggtggc gacttcaaac tacgcgcctt
     8401 ccgaactcta cccgcaaggt caaaaccgga gcggttttct tcccacaatc gcgctcatcg
     8461 agtccagtct gaccgtctta aacgttgacg gaggggaaga ctaccggctg cgtaccctcc
     8521 gccccgccga gattttcttt acgcctgcca atgaagaaaa tgaggcaaaa ctggcaaaac
     8581 tgttcaaaga aatgacaggc attaccgatt tgaaccccgg catcagcacc atccacggcc
     8641 gggaaattcc ccacaaagcc gagtccggtc gtaccatatg gtttgatttc cgcgcactgt
     8701 gcttcagtcc ccgctcacag tccgactatc tgtatttggc cgaacattat gaaatggttt
     8761 ttatttcagg tttggaacaa ctctcaccgc aagaaaaggc ggaggcgcga cggctgactt
     8821 ggctgattga cgtactctac gatttccggg tcaaactgtg tgccaccggc gcggtagatg
     8881 tcaaccatat ctacacggaa ggcgattttg ccgaagaatt tacccgcacc gccagccgga
     8941 tggtcgaaat gcagtccgaa gtttatttgg aacagccgca cctgacctta tctcccaagg
     9001 cttcaggcgg ataagttatt tttttggtag aataccgatt tgattcttct taagtaaaaa
     9061 taaggatata gcatggcgat tgaacgtacc atatccatca tcaaacccga tgccgtcggc
     9121 aaaaacgtta tcggcaaaat atacagccgc tttgaggaga acggtctgaa aatcgttgcc
     9181 gccaaaatga agcagcttac cctcaaagaa gcccaagaat tttatgcggt tcataaagac
     9241 cgccccttct atgccggatt ggttgaattt atgaccggcg gtccggttat gattcaagta
     9301 ctggaaggcg aaaacgccgt tctgaaaaac cgcgaactga tgggggcgac caatcccacc
     9361 gaagccgcag aaggcacgat acgcgcggac tttgccactt cggtcagcat taacgccgta
     9421 cacggttccg acagtgtgga aaatgccgct ttggaaattg cctacttttt cagccaaacc
     9481 gaaatctgcc cccgttgata caatacaccg cccaattcct attcagacgg cataaaatat
     9541 atccatgccg tctgaaaact ctgttgcaaa agacttcaaa tcaaacttgc ctgccctgca
     9601 attttttatt tgaagcctta atttaagaaa aacacaaata catgaaaacc aatctgctca
     9661 actacgacct tcaagggcta acccgacatt ttgccgatat gggtgaaaaa ccattccgcg
     9721 ccaaacaggt tatgcgttgg atgcaccaat ccggcgcgca aaattttgac gaaatgaccg
     9781 atttggcaaa atcgttgcgc cataaactga acgaacaggc aagcatcgaa attcccaagc
     9841 tgatgatgtc ccaagaatct tcagacggca ctcgaaaatg gcttttggat gtcggtacgg
     9901 ggaacggcgt ggaaaccgtc ttcatccccg aatcggatcg cggcacgctc tgcatttcct
     9961 cgcaagtcgg ctgcgctttg gaatgtacat tttgttcgac cggccggcag ggcttcaacc
    10021 gcaatttaac cgctgccgaa atcatcggac agttgtggtg ggcaaacaaa gcgatgggcg
    10081 ttacaccgaa aaacgagcgt gtgatttcca acgtcgtcat gatgggcatg ggcgagccga
    10141 tggcgaactt cgacaatgtc gttaccgcct tgagcatcat gctggacgac cacggctacg
    10201 gtttgagccg ccgccgcgta accgtttcca cttcgggtat ggttccccaa atggacaggt
    10261 tgcgcgatgt catgccggtg gccttggcgg tttccctcca cgcttccaat gacgaagtcc
    10321 gcaaccaaat cgtaccgttg aacaaaaaat atcccttgaa agaattgatg gccgcatgcc
    10381 aacgctatct ggtcaaagcg cccagggatt tcatcacttt cgagtatgtg atgctggacg
    10441 gtgtcaacga taaggcacaa catgcatacg aacttattga actggtcaaa gatgttccct
    10501 gcaaattcaa tttaatcccg tttaatcctt tccctaattc gggatatgaa cgttcaagta
    10561 acgaaaacat ccgtattttc agagatatcc tgcaacaagc cgaatttgtc gttaccgttc
    10621 gaaaaactcg tggcgacgat atcgatgccg cctgcggaca gttggcaggt caggttcagg
    10681 ataaaacgcg ccgccaacaa aaatggcagc agattttaat cggacaacag gggtaattat
    10741 gccttttaag ccatccaaac gaatctcttt attacttgtt cttgccttgg gcgcgtgcag
    10801 cacttcctac cgcccctcgc gggcagaaaa agccaatcag gtttccaata tcaaaaccca
    10861 gttggcgatg gaatatatgc gcggtcagga ctaccgtcag gcaacggcaa gtattgaaga
    10921 tgccttgaaa tcgaacccta aaaacgagct tgcctggctg gtccgtgccg aaatctatca
    10981 atacctgaaa gttaacgaca aggcgcagga aagtttccgg caagccctct ccatcaaacc
    11041 cgacagtgcc gaaatcaaca acaactacgg ctggttcctg tgcggcaggc tcaaccgccc
    11101 tgccgaatct atggcatatt tcgacaaagc cctggccgac cccacctacc cgacccctta
    11161 tattgccaac ctgaataaag gtatatgcag cgcaaaacag gggcaattcg gattggcgga
    11221 agcctatttg aaacgttccc tcgccgccca gccgcagttc ccacccgcat ttaaagaact
    11281 ggcgcgcacc aaaatgctgg ccgggcagtt gggcgatgcc gattactact ttaaaaaata
    11341 ccaaagcagg gtagaagtcc ttcaggccga tgatttgctg ctaggctgga aaattgccaa
    11401 agccctcggc aacgtgcagg cggcatacga atatgaagca caattgcagg caaatttccc
    11461 ctactcggaa gaattgcaaa ccgtcctcac cggtcaataa acagattcaa actatatgaa
    11521 cacactccaa cgccgcaaga cgcatcaagt cctcatcgat catattaccg tcggttcaga
    11581 agcacccgtc gttatccaat ctatgaccaa caccgacact gccgatgcaa aagccaccgc
    11641 attgcagatt aaggaattga gcgatgccgg ctcggaaatg gtgcggatta ccgtcaacag
    11701 ccccgaagcc gcgtccaaag ttgccgaaat ccgccgccgc ttggacgata tgggctatgc
    11761 cacaccactg attggcgatt tccattttaa cggcgaacgc ctgttggcgg aatttcccga
    11821 atgcggcaaa gcattgtcca aataccgcat caatcccggc aatgtcggca aaggcgtaaa
    11881 aggcgatgaa aaatttgcct ttatgattcg gactgctgct gaaaacgata aagccgtccg
    11941 tatcggcgta aactggggtt ctttggatca gagcctcgcc aaacgtatga tggatgccaa
    12001 cctcgtttct tccgcgccga aaccgcccga agaagtgatg aaggaagcac tgattgtctc
    12061 cgctttggaa tctgccgaaa aagccgttct attgggactg cccgaagaca aaatcatcct
    12121 gtcgtgcaaa gtcagcgcgg ttcatgattt gattcaggtt taccgcgaac tgggcagccg
    12181 ttgcgtctat ccgctgcatt tgggtttgac cgaagccggt atgggcagca aaggcattgt
    12241 cgcatcaacg gcggcattat ctgttttgct tcaagaagga attggcgaca ccatccgcat
    12301 ttcactcact ccggaaccgg gcagcccgcg tactcaggag gtcgtcgtcg ggcaagagat
    12361 tttacagact atgggtttgc gctcgtttac gccgatggtt accgcctgcc cgggatgcgg
    12421 gcgtaccacc agtaccgtat ttcaagagct ggcacaagat gttcaaaatt acctgcgcca
    12481 aaaaatgtct atatggcgta ccctttatcc cggggttgaa tccctgaacg ttgccgtaat
    12541 gggctgcgtt gtcaatggcc ccggagaaag caaattggcc gacatcggaa tcagccttcc
    12601 cggtacgggg gaaacacccg tcgcacctgt ttatgtagat ggggagcgca aagtcacact
    12661 gaaaggtaat aatattgcaa gcgaattcct agctattgta gaggaatatg ttaaaaccaa
    12721 ttatggcaaa aacagttcta aacgcaataa aggaaaagtc atcccgatac agtctctata
    12781 aaacaaatgc cgtctgaacg tttcagacgg catttgtttc tctcagattt cttattaaag
    12841 ccgcaaagaa gcgcggtttt ccaaaacttg gtcgatcaaa ccatattctt ttgcttcttc
    12901 ggcagacatg aaattatcac ggtcggtgtc gcgctccaaa tctgccaaat cgcggccgca
    12961 atgtttcgcc atcaggcggt tgagtttttc tttgattttc aacaactcgc gtgcgtggat
    13021 ttcaatgtcg gatgcctgac cgcccaagcc gccgctgatt aaaggctggt gaatcataat
    13081 ccggctgttg ggcagggcga aacgtttgcc tttctcgcct gccgacaata agaacgcgcc
    13141 catacttgcc gcctgcccca agcacaaagt cgatacatcg ggcttgatga aattcatcgt
    13201 gtcgtaaatc gacataccgg ccgttaccga gccgccgggg gaattgatgt agaagaaaat
    13261 atccttatcc ggattctcac tttccaaaaa caacagttgg gcgaccacca gattagcaga
    13321 ctcatcggtt accgggccaa ccagaaatac gatgcgctct ttcaaaagcc gggaatagat
    13381 atcgaatgca cgctcaccgc gaccgctctg ctcgataacg gtagggacaa gatggttatc
    13441 aaaagacatt tcgtctcctt tcatgatgga aaagcaccaa agcgggcttt aaaaacggct
    13501 tcggtgcttt caaaaactgc cttcagacag cattttcaga acaatcaggc ttgcgcgccc
    13561 atcacttcgt caaaagacaa agcttttttg tttactttgg ctttgcccaa aacgaaatca
    13621 acaacgttgc tttctactgc caaagaagtc ggggcttgca ggcgggaagt atctgcgtag
    13681 taccagtcaa tcacttcttg aggatcttcg tagctttctg cgaagttggc gacaacggct
    13741 ttgatttgct cttcagtcgg ttccagtttg ttttcgtcaa ccagtttggc caaaatcaga
    13801 cccaaagata cgcgacgttc ggcttgttct ttgaacatat ccaaaggcaa atccaagttc
    13861 gcggcatcgg tcataccttg gttaacgaag ttttgtttca tttcgtttgc caggcgggcg
    13921 gcttcttcat tgaccaaagc aaccggaact ttcaactcta cggctttaat cagcgcgttc
    13981 attacggatt ctttggtttg ttcgttcacg cggcgttcca cttcgcggct tacgtttttc
    14041 ttcacttctt cacgcatttt ggcaacatcg ccatccgcaa tacccaaggc ttttgcaaaa
    14101 tctgcatcga cttcaggcag agtgggctcg gaaacattgt tcagcgtaat ggtgaacacg
    14161 gcagttttac cggcaacatc tttgccgtgg tattcttcag ggaagttgac ggtaacgtct
    14221 ttactttcgc ccgctttcat gccgactacg ccggcttcaa attcaggcag catttgacct
    14281 gcgcccaata cgaaggcgta gtttttggat gcgccgccgg caaaaggttc gccgtcgatt
    14341 ttgccttcaa agtcgatgat gacgcggtcg ccgtttcggg cttcgcggtc aacatggttg
    14401 aagcgggtac gttgtttacg caggatttct acagtttggt cgacttcggc atcgccgacg
    14461 gaagcggtta ctttttcgac ctcttgtgca gacaaatcgc cgataacgac ttcggggaac
    14521 acttcaaaaa tggcggcaac tttgaaagac tctttatcgt cttgttcttc aacgccttca
    14581 aaacgtggat agcctgccac tttcaactct tgggcaacgg caacatcgta gaagcggcgt
    14641 tgcaccagct cgttgatcac gtcgttttgc gcgctcgcac cgtacatttg ggcaatcatt
    14701 tttaaaggtg ctttacccgg acggaaaccg tcgatttttg cacggcgttg ggtttgtttc
    14761 agttttttat cggtttctgc gttgatttcg gaccaaggca gggacaacac tactttgcgt
    14821 tccagatttt ctaaaatttc aacagttacg ctcatcataa gcccttaaat ttgttgtgtt
    14881 gataaaatga taaaccttct tccctacatg gggaagcaaa cagcgcaacg gtacgatatt
    14941 tgaaccgcat tgccgcaaag gggaaatttt agctggcaag tatatcacaa tgtttcgcct
    15001 gaaacataat atgccgagac ctttgcaaaa ttcccctaaa atcccctaaa ttcccaccaa
    15061 ggcatttagg ggatttccca tgagcacctt cttccggcaa accgcccaag ccatgactgc
    15121 caaacacatc g
//
LOCUS       DAWXHA010000053        15016 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.053, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000053 DAWXHA010000000
VERSION     DAWXHA010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15016
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.053"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            1167..2276
                     /locus_tag="AABD07_001223"
     CDS             1167..2276
                     /locus_tag="AABD07_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFB2355756.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLASRPLCTQTAIMVCNAIKHPYETAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLVIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVSKIDA
                     IRCLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     GIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSF"
     gene            complement(2991..3803)
                     /locus_tag="AABD07_001224"
     CDS             complement(2991..3803)
                     /locus_tag="AABD07_001224"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HFB2355757.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLDTGNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            complement(3763..3971)
                     /locus_tag="AABD07_001225"
                     /pseudo
     CDS             complement(3763..3971)
                     /locus_tag="AABD07_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244860.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
     gene            3992..4453
                     /gene="tsaE"
                     /locus_tag="AABD07_001226"
     CDS             3992..4453
                     /gene="tsaE"
                     /locus_tag="AABD07_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HFB2355758.1"
                     /translation="MSDFSPVPRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFALHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHGGGGRKCLLTAHTERGRESLPL"
     gene            4450..5700
                     /locus_tag="AABD07_001227"
     CDS             4450..5700
                     /locus_tag="AABD07_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HFB2355759.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPTHAQVFALPPVGGFKDRLVVDLYPHGMDADDPMMALLNGS
                     LNKTLRGSPEADPAQNTTPRPGRGKNGRRPVIMLDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            5782..6600
                     /locus_tag="AABD07_001228"
     CDS             5782..6600
                     /locus_tag="AABD07_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFB2355760.1"
                     /translation="MKGMDKLRYQRDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPKPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLRYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDVDIFRNFSI"
     gene            complement(6646..7787)
                     /locus_tag="AABD07_001229"
                     /pseudo
     CDS             complement(6646..7787)
                     /locus_tag="AABD07_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
     gene            complement(7836..8258)
                     /locus_tag="AABD07_001230"
     CDS             complement(7836..8258)
                     /locus_tag="AABD07_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355761.1"
                     /translation="MNKNRKLLLAALLLTAFAAFKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GNWQAARIRLPVCVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(8251..9060)
                     /locus_tag="AABD07_001231"
     CDS             complement(8251..9060)
                     /locus_tag="AABD07_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFB2355762.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLGSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFGEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWEGGPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLYGENSMGAYRVLP
                     LGSAGGSGANVLMEAAQWQDRSEHAGSVWMMVQTREQWRQAQEKGADVAVWRVCDDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHAVVRDETIGKNHE"
     gene            complement(9142..9519)
                     /locus_tag="AABD07_001232"
     CDS             complement(9142..9519)
                     /locus_tag="AABD07_001232"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HFB2355763.1"
                     /translation="MIYGIGTDIVSLKRIVRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFCNIGIGHDALGKPEFFYGPALSEWLEEQG
                     ISRVSLSMADEGDTVLAFAVAEK"
     gene            complement(9569..10297)
                     /locus_tag="AABD07_001233"
     CDS             complement(9569..10297)
                     /locus_tag="AABD07_001233"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HFB2355764.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAGFTKILTDAGIRVSLFIDADNEQIQAARDVGAPVVELHTGAYADAH
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPVAQILAIRELNIGHSLISQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(10350..11093)
                     /gene="recO"
                     /locus_tag="AABD07_001234"
     CDS             complement(10350..11093)
                     /gene="recO"
                     /locus_tag="AABD07_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HFB2355765.1"
                     /translation="MSEHRVNHEPVFMLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPASVSWYGSQELKTLHRAEWMGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMSELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCRDTGALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLLIGTLLPEGLKSRQVLEQIRQFDRNTA"
     gene            complement(11127..12215)
                     /gene="pheA"
                     /locus_tag="AABD07_001235"
     CDS             complement(11127..12215)
                     /gene="pheA"
                     /locus_tag="AABD07_001235"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HFB2355766.1"
                     /translation="MSQTIDELLIPHRNAIDTIDAEILRLLNERAQHAHAIGELKGTG
                     AVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERPLTIAYLGPQGTFT
                     QQAAIKHFGHAAHTMACPTIDDCFKQVETRQADYLVAPVENSTEGSVGRTLDLLAVTA
                     LQACGEVVLRIRHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGRRLPNAERIAVSSN
                     AEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTRFLVMGHHETGASG
                     SDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWEYLFFIDIEGHRRD
                     AQIQTALERLGERASFVKAIGSYPTAVL"
     gene            complement(12293..13354)
                     /locus_tag="AABD07_001236"
     CDS             complement(12293..13354)
                     /locus_tag="AABD07_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HFB2355767.1"
                     /translation="MFGTAFGQVAGGAVSDIKGRKPVALTGLIVYCLAVAAIVFASST
                     EQLLNLRAVQAFGAGMAVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLAAPMVGAL
                     LQGLGGWRAIFVFLAAYSPVLPGLVQYFLPNPAVGGKIGRDVFGLVAGRFKRVLKTRA
                     AMGYLFFQAFSFGSMFAFLTESSFVYRQLYHVTPHRYAWVFALNIITMMFFSRVTAWR
                     LKTGAHPQSILLRGIVVQFAANPSQLAAVLFFGLPPFWLPVACVMFSVGTQGLVGADT
                     QACFMSYFKEEGGSANAVSGVFRSLIGAGVGMAATVLHDGSATVMAATMTASASCGIA
                     LLWLCSHRAWKENGQSEYL"
     gene            complement(13370..13648)
                     /locus_tag="AABD07_001237"
     CDS             complement(13370..13648)
                     /locus_tag="AABD07_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HFB2355768.1"
                     /translation="MPSEAVSGGISFGFAPPSDMLDLRPYRPSFATVSLFDLNGKTMS
                     PPLPPMSGKLMAVLMAVLVALMPFSTDAYLPAIPEMAQPLNADIHRIE"
     gene            complement(13638..14513)
                     /locus_tag="AABD07_001238"
     CDS             complement(13638..14513)
                     /locus_tag="AABD07_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFB2355769.1"
                     /translation="MFYQILALIIWGSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANASGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATFA
                     AGRLSRRDAQNGNAV"
     gene            14674..>15016
                     /locus_tag="AABD07_001239"
     CDS             14674..>15016
                     /locus_tag="AABD07_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2355770.1"
                     /translation="MFQGPDSRLRGNDEAILLAEGQKSAVTEYYLNHGEWPENNGDAG
                     VASSSDIKGKYVESVTVANGVVTAQMKSDGVNKEIKGKRLSLWAKREDGSVKWFCGQP
                     VTRNGDTVADAN"
BASE COUNT         3476 a         4301 c         4030 g         3209 t
ORIGIN      
        1 acaaaccttg cggcttgttg ccctctctct aactctctcc cgcagggaga gaggacgggg
       61 tggctgttgg ggttaaggtt tatgcaaact aatacggctt gtgcaggctg ttttttattt
      121 ttcatacgac ctgaaatcaa cggtaaatcc aagttgcttt tcaaaccgcc tgcaaccgcc
      181 aaacctgctg caatccgctc cctcccccgt gggggagggc cggggagagg gcattctccg
      241 agttgcggca atctttccca aactccctta gtcttctaaa atacaaacct tgcggcttgt
      301 tgccctctct ctaactctct cccgcaggga gagaggacag ggtggctgtt ggggttaagg
      361 tttatgcaaa ctaatacggc ttgctgccct ctctctaact ctctcccacg gggagagagg
      421 actatgatgc ccaccggcgg cttgctatta ggaatatctg aatcgtcatt cccacgaaag
      481 tgggaatcta gaacgtcaaa tctcaagaaa ccgttttatc cgataagttt ctgttccgac
      541 aggttcggat tcccgcctgc gcgggaatga cgaatccatc catacggaaa cctgcatccc
      601 gtcattccca cgaacctaca ttccgtcatt cccacgaaag tgggaatcta gttttttgag
      661 tttcagtcat ttccgataaa ttgccttagc attgaaggtc cggattcccg cctgcgcggg
      721 aatgacggga tttgaggttt ctgtttttaa ttttctgttt tcacgggaat gacggtttaa
      781 aagttacccg aaacctcaaa aaaaaagctg tgttttaata tagtgttgat agacgtactt
      841 ggcctccatg tattcaatcg tggaaatcta tatcttcgtc ctcgccgaaa tagtctatgc
      901 ccgatataca attttgatac acaaacttgg aaatatgggt atcgtcgccg gagcgataga
      961 atgcggacag ttatatatat acggtttttt taggggagcg ggcagatgaa gggcggattt
     1021 tgaattaacc ccatgcaaat tgacttttgc gggcggtttt accgcccata tatttacaaa
     1081 agccaaattt ctaaacatat atccttgata tatacacggc gtaaacatat actggaaaca
     1141 tctttaaatt ttccgaaatt ttaaacatga gcaactggaa acccgatatt ccctataacg
     1201 atttaccacc cctgccgcca aaacaggata ttgaaagcaa aaccatcctg aaacgttgta
     1261 tagccgcccg tgcatccctt gcccgtttaa agcaggcggc agaattgata ccgaatcaag
     1321 ccatgctgat taacaccctt cctgttatgg aagcccgtgc aagttcggaa attgaaaaca
     1381 tcgtaaccac cacggacaag ctgtttcaat ccctgcaaat ggatacggaa cggcaagacc
     1441 ctgccacgaa agaagccctg caataccgca ccgccctgtt tgcaggctat gaatcactgg
     1501 cgagccgccc tttatgcaca caaaccgcca tcatggtctg caacgccatc aagcacccct
     1561 acgaaacggc catccgcaaa acaggcggca cagccctaaa aggaggtaac agcggaaatg
     1621 ttgtctatac cccgcccgaa ggagaagaaa ccatacgcgg caagctggca aattgggagc
     1681 ggtttattca cgaaagcggc gatttagacc cgcttgtcat catggcggcg gcacattacc
     1741 aatttgaagc catccacccg tttacggacg gcaacgggcg gacgggacgc atattgaaca
     1801 gcctgctatt gattgaaaaa gggcttttgg atttgcctat tttgtatttg agccgctaca
     1861 tcatcgaaaa cagggcggac tattaccgcc tgcttttagg cgtaaccgaa cggcaggatt
     1921 gggaaagctg gataatctac atcttagacg gcgtagccga caccgccgat tggacggtat
     1981 cgaaaataga tgcgatacgc tgcctgttcg agcagacacg tcaacacata cggacacacg
     2041 cacaaggaat ctacacgcac gaactggtaa atcttctgtt tgagcagcca tatacacgca
     2101 ttgccaacct agaagcggca gggatagcca aacggcagac ggcttctaag tacctgaaag
     2161 agctttcagg cataggtgtg ctgcaagaaa tcgccatcgg cagggacaaa ctattcattc
     2221 atccgcgcct aatggaacta ttgcggggag agggcaacag ctttacttca ttctaacccc
     2281 ctcttcatcc ctacatgact aacacgaaac agggattttg acacccgaac cggtacccct
     2341 tgtattttcc ccgcgaaaag ccggcatccg cccgcgcatc atgggagcaa caaaacccct
     2401 gcctaaaatt ttgacttgtg caaattaggg gtatattgaa aaatggctaa aataaaatgt
     2461 ttaataaaca aaatgttgaa acttaatttc gatagagcct ctgcatatcg tattgaggcg
     2521 ttaatggaat ttgagaaagc tatttttaaa taagaaaagg taactattaa atagctacct
     2581 ttctaaaatt aaatatcaac acatcgttaa aacacagcca aaaaaaaccg aaaccgaacg
     2641 gtccggattc ccgcctgcgc gggaatgacg gatttcaaga ttacggtatt gtcggggatg
     2701 atgggaaacg gtgggaattg tgtaaaaaat gccgtctgaa gcctttcagg cggcatttgc
     2761 ggcattcgga catttaaaaa tcccgtcatt cccgcgcagg agggaatccg aatacatccg
     2821 cacagaaacc tgcatcccgt cattcccgcg aaagcgggaa tctagaacgt aaaatctaaa
     2881 gaaaccgttt tatccgacaa gtttccgcac cgacaggtct agattcccac tttcgcggga
     2941 atgacgggat tttaggtctc tgtaatctcg ggcagctttc cgttatcgtt ttaacccaaa
     3001 gacaccattt caatctgctc catcgtcctg cccagaaaac gctcgccgat ggttctgaat
     3061 ttcaaaggaa tatcgctgac gtaaaaacgg tagtcgggat tgttgttgcc ggtatcgagc
     3121 aatccttcct gtgcaaggac gcgtgcggtt tcttcggccg tcgtaatcgc ggaatcgacc
     3181 agcgcgacat tgtgcgcctc cctgccgatt aagggcttga gcaagggaaa gtgcgtgcag
     3241 cccaacacca gcgtatcgat gccgtctgca agcagtggtt tgaggtattc gcatacggtc
     3301 aggcgggtaa cttcgtgttc caaccaacct tcctccacca aagggacgag cagcggcgcg
     3361 gcctgcgtgc ggacgagcgt gtcggggttg tccctgtgga tggcgcgcgc ataagcattg
     3421 ctgttgactg tcgtattggt ggcgatgatg ccgattttat tgttgcgcgt cgttgccagc
     3481 gcggctttgg cgccggcgga aatcacgtcc aaaacgggca tattgcccgt cttttgacgg
     3541 attttccgcc ccgcaaccgc cgcaatcgtg ttgcacgcga taaccatcgc cttgacatcg
     3601 tgtcccaata aaaaatcgac aatctgcatc gagaaatttt cgatggtcgc cttagatttc
     3661 gtcccgtaag gcacgcgcgc cgtgtcgccg aaataaatga tgttctccat cggcagccgt
     3721 tccatcagcg cgcgcacatt ggtcaaaccg ccgattcccg agtcaaaaac gccgatgggc
     3781 cgctgcctgc cgatattttc catccttttt ccaatccgtc ctaaacatac aatccgcata
     3841 ttgtacacgc gccgcttttt cttgacagcc atgccgtctg aaagcaggat gcgtatttgg
     3901 ctgttataat gtacggcaat gccgccgccg ggcgcacggt ttgccgaccg cctgcccctc
     3961 cgatccgcca cataaaagtt gtaaagcccc tatgtctgat ttttcccccg ttccccgatt
     4021 ccttgccgac gaagccgcca cactcgattt gggcgcggcg tggtcttccc gtttaaacgc
     4081 accgctggtc atttacctcg aaggggattt gggtgcgggc aaaaccacgc tgacgcgcgg
     4141 catcctgcgc ggattgggtc accagggcgc agtcaaaagc ccgacctacg ccatcgtcga
     4201 atcttatccg ctggaacgct tcgccctgca ccatttcgac ctctaccgct tctcattccc
     4261 cgaagaatgg gaagacgcgg ggcttgacga gctgtttgcc gcaaacagcg tctgcctgat
     4321 cgaatggccg caacagggag gcgaatttac cccgcctgcc gacatcaccg caacattgac
     4381 acacggcggc ggcggcagaa aatgcctgct gaccgcccat accgaacgag gacgcgaaag
     4441 cctgccgcta tgaccaaact gacacgaaga caaatcatcc gccgcaccgc cggcacactg
     4501 ttcgccctaa gccccatcgc atccgccgtt gccaaaacgg tacgcgcccc gcagtttacc
     4561 gccgcacgga tatggccgtc gcacacctac acccgcctga cgctggaaag caccgccgcg
     4621 ctcaaatacc agcacttcgc gctcgacaac ccgggcaggt tggtcgtcga tatacaaaac
     4681 gcaaacatca ataccgtatt gcacgggctt tcccaaaaag ttatggcgga cgaccccttt
     4741 atccgcagca tacgcgcggg tcagaacacg ccgaccaccg tccgcctcgt catcgacctg
     4801 aaacagccca cccacgcaca agtcttcgcg cttccgcccg tcggcggctt taaggaccgc
     4861 ctcgtcgtcg acctctatcc gcacgggatg gatgccgacg atccgatgat ggcgctgctc
     4921 aacggcagcc tgaacaaaac cctgcgcggc tctccggaag ccgaccccgc ccaaaacacc
     4981 acgccccgac ccgggcgggg caaaaacggg cgcagacccg tcatcatgct cgatccggga
     5041 cacggcggtg aagaccccgg cgccgtcagc ccgggcggtt tgcaggaaaa acacgtcgtc
     5101 ctctccatcg cccgcgaaac caaaaaacaa ttggaagcct tgggttataa cgtctttatg
     5161 acgcgcaacg aagacgtgtt catcccattg ggcgtgcgtg tcgccaaagg gcgcgcacgg
     5221 cgggcggacg tattcgtctc catccacgcc gacgctttca ccagcccctc cgcgcgcgga
     5281 acgggggttt atatgctgaa caccaaaggc gcgaccagct ctgccgccaa attcttggaa
     5341 caaacccaaa ataatgccga cgcggtcggc ggcgtaccga ccagcggcaa ccgcaacgtc
     5401 gataccgccc tgctcgacat gacgcaaacc gccacactgc gcgacagccg caaactcggc
     5461 aaactggtgc ttgaagaatt gggcaggctc aaccatctgc acaaaggcag ggtggacgaa
     5521 gccaatttcg ccgttttgcg cgcacccgat atgccgtcta tcctggtcga aaccgccttc
     5581 ctgtccaatc ctgccgaaga gaagctgctg ggcagcgaat ccttccgtcg gcagtgcgcc
     5641 caatccattg cctcgggtgt ccaacgctac atcaatacat ccgtattgaa gcggggttga
     5701 ttgaaaaggc ggtgtttcaa aatatagttg tcggatgaag gcaggcataa acctacttcc
     5761 gccccaaacc gcgtttttat gatgaaaggt atggataaat tgagatacca acgggatttt
     5821 ttaaatatcc gccccatttt tacagccggc gaacaagaat acctgaccga attgtccgat
     5881 cggcttcctt tatctgtttt aacggactcc gtgcgtaata ttgaagaaat cggtatcgat
     5941 tttgtgtaca gttctgccaa attggaagga aacacttata atcaatacga tacgcaggca
     6001 ttgcttaaac tcgggcaaac cgcaggcggg aagttatatt cggatgccgt aatgttaatc
     6061 aacctgaggg aaagttaccg gcacctgctg tccggtttgg acagccccaa gccgtttgac
     6121 tggttggatt tcttaaaaac cacccacagc ctgatttcgg aaaacttact ggaaaaaggc
     6181 tccggcggcg tagtccgccg cgacagcgtt actataagcg ggacagacta caccccttta
     6241 tccaacccgc aaagtttgga tacggaattg aaatggttgc ttcaagaagc ccccaaaata
     6301 gaaaatcctt tcgaccgcgc cgtttatctc cataataatt tggcgtatct ccgatatttt
     6361 aaggactgca ataaacgtac tgccagaaac tgtatgacct tgtcgctgat gcgctccggt
     6421 ttttttcctt gcgtattctc ccccgacagt tatcccgcct atgccgaggc tgtcgtagcc
     6481 tattacgaaa ccggcgatta cggtttattc aagaaatatt ttatttcggc atacgaaaat
     6541 accgtaaata agtacggtcc ccagcctgat gtggatattt tccgaaattt ctccatttaa
     6601 aaagccgtct gaacattttt cagacggctt ttttgtacac tttcctcaac ggttcgatcc
     6661 ctgcaccata tcgatcagga acaggcggca gtcgaggttg ccgttataaa gcgggatttt
     6721 ccgcttgggc agcaggcgca tgaatttggg catttccctg tcgccggtaa acatgccgac
     6781 ccgccagccg gcatagtgtt ttttcaacca cgtccccaac tgcggataaa gtgcctgcaa
     6841 agcgcggact tcctcaaggc gcacgccgta gggcggattg gacaccatga tgccgttttc
     6901 gccgttcgga cggacggact gcgcgccggc aacgctgaag gaaacgatgt cgtccgctcc
     6961 ggcattgtgt gcgttgtcca atgccgtctg aacgatgcgg cggccgttgt cgctgcctgc
     7021 aatcggggcg cggacggggc gggtttgcgc ttcggcgcgg cggcgcaaat ccgcccacag
     7081 cgttttatcg aaattttgca gtttttcaaa accgaagcgg cgcatctacc cggcgcgcgg
     7141 ccggcggcaa tccaagcggc ttcgatagca atcgtgccgc tgccgcaaaa cgggtcttga
     7201 aacggctgcg tgccgtcgta gcctgccgag agcagcagcc cggcggcaag gttttcgcgc
     7261 agcggggctt cgccggtatc caggcggtag ccgcgtttga acagggcttc gcccgaagtg
     7321 tcgatgaaga tttcgacatt gcgttcgtcc aaaaaggcgt ggatgcggac atcgggcgcg
     7381 gctttgtcca cgctcggacg tgcgtcgtaa atgtcgcgga aagcgtcgca gacggcatct
     7441 ttgacggtca ggccggcaaa ttggaggctt ttgacgttgg cgcgttttgc ctcgattttg
     7501 actttgaacg tctgctgcaa ggtaaaccag ttgaaccagt tgatgttttt ggcaagtttg
     7561 tagatgtcgc gctcggttcg gtatgtgcct ttggtcaggc gcagcaggat gcggccggcg
     7621 gtgcgcgagt gcaggttggc ggcgtaggcc tgttccaatc cgccacggca ggaaacgccg
     7681 ccgtcaaacg cccgaacctc ggtgcagccg aggctttcga gttcttgcga taaaacggtt
     7741 tccaagccgc gcgggcaggt ggcgaaaagt gtatataaag tattcatagc gtgtcctttc
     7801 cggacggatg ttccggcaat ggcggattga aaggtttatt cggcggtaaa tgccgtctga
     7861 aatgtccggc tgccgattgt aatgtccgcc gtaaaatcgc gcctgccttc gacacagacg
     7921 ggcaggcgga tgcgtgctgc ctgccaattc cccgacggtt gccgctcgaa catatagcgg
     7981 ttgaaaccca tatccatatt tttcatactg aagctgatgc tgacctgttc cgtgccggcg
     8041 ggcgcgtgtt cgatataaat atcaaacggt tttttggttg aaacggcggc ggcgcggaca
     8101 cggcttccgt ccggcagcgt gcaaccctcg gtcaaatcgc attgcgccgc cacggcttgc
     8161 ggctgctgcg cctgccacca ttgcaacaaa acgagcttga aggcggcaaa ggcagtcagc
     8221 agcagtgcgg caagcagtaa tttgcggttt ttattcatga ttcttcccta ttgtttcatc
     8281 ccttaccacc gcgtgcgccc ccaatccgag ccatagtttt ccataacgtg caaccgtctg
     8341 tccgtttgct gcaagtacga gcggcacgga tacgccctgc cgcagggctt ctgccgcctc
     8401 ttgtgcctga acatcatcgc acacgcgcca cacggccaca tccgcgccct tttcctgcgc
     8461 ctgccgccat tgttcgcggg tctgcaccat catccacacg ctgccggcgt gttcggacct
     8521 gtcctgccat tgtgccgcct ccatcaaaac gttcgcaccg cttccccctg ccgaacccaa
     8581 aggcaggacg cggtacgcgc ccatactgtt ttcgccgtac aaacctgttt tcaggctgcc
     8641 gtacaaacgg cgcgggacgg acagcgaacg caaaagcgca ccgttggcag gcagcatggg
     8701 ggcaacggta aaatcacccg ccttctgcca agaccattcc tgcccttcgc gcgattgcgg
     8761 tccgccctcc cattgatcgg ggtttaccca taagaatttc aggcagacgc gggcgtgttc
     8821 gtaggaatgg attttggtca gccaaggcgt ggcggcgagg atgcggatgc cgagttcttc
     8881 tccaaactcg cgttgcaggg cttggaagtc ggtttcgccc gcctcgacct tgccgccggc
     8941 aaattcccaa tatccggcat agggcttgcc ttcggggcgc gagccgagca ggtaattgcc
     9001 gtctgaatcg agcaggatgc cggcaacgac gcggataagg gggcgggtat cttggatcat
     9061 ggcgggtatg cggttggtcg gtcggaatgc aaatgaggga agggcaatgc cgtcaacggg
     9121 tttgccgaat ttcagacggc attatttttc ggcaacggca aacgccaaca cggtatcgcc
     9181 ttcgtccgcc atactcaggc tgacgcggct gatgccttgt tcttccagcc attcggacag
     9241 ggcggggccg tagaaaaatt cgggcttgcc caatgcgtcg tgcccgatgc cgatgttgca
     9301 gaaggaaacc gcgcctcgta tgcccgtgcc gacggctttg gcgaaggctt ctttggcggc
     9361 aaagcgtttg gcaaggtagt tgacgggttt gcccgcctgc ggaaattcaa gcagctcttc
     9421 gggagtgagt atgcgccctg caaacgcctg tccgaatttt ttgtttaagc ggacgatgcg
     9481 cttgagggaa acgatgtctg taccgatgcc gtaaatcata tttgcgctcc tttttcgtga
     9541 aatgccgtct gaaacggttt gcctgccctt acggcagcag ccttgccctg aacatcgcct
     9601 ccttcatctg gcgcacggcc tcgggcaatc cgaggaaaag tgcctgcgaa atcagcgaat
     9661 gcccgatgtt cagctcgcgg atggcgagga tttgggcgac gggggtaacg ttgtgtatgg
     9721 tcagtccgtg tccggcgttg acgaccaagc ccaaatcgcc ggcgaaatgc gcgccgtttt
     9781 gcagacgctc gaattgcttg agttgttcgg cgtggctgtg tgcatcggca tatgcgccgg
     9841 tgtgcagctc gacaacgggc gcgccgacat cacgggctgc ttggatttgc tcgttgtcgg
     9901 catcgatgaa gagcgagact cggatgcctg cgtcggtcag gattttggtg aacccggcaa
     9961 ttttttcttg ttgcgccaat acatccaagc cgccttcggt cgtgatttcc tgccgttttt
    10021 caggcacgat gcacacgtct tccggcatca ctttaagcgc gttttcgagc atttcttccg
    10081 tcaacgccat ttcaaggttc aggcgcgtgc ggatggcgtt tttgacggca aatacatccg
    10141 cgtctttgat gtggcggcgg tcttcgcgca ggtgcatggt aatcaggtcg gcaccgtgcg
    10201 tttcggcaac cagtgccgcc tccacggggc tgggataagt cgtgccgcgc gcgttgcgga
    10261 cggtggcgat gtggtcgatg ttgacaccca gaagcataat gtttcctttt ctcttcgttt
    10321 tcctgtttga cggcatggtg cgggcgcagc tacgcggtat tgcggtcgaa ctgccttatc
    10381 tgttccaaca cctgccgcga tttcaagcct tcgggaagca gcgtgccgat tagcagccgt
    10441 gtgattttca atgcctgttg caggctttcg gcggtgcgga aactgccttc gcgcaaatcg
    10501 atcaggctct gcccttcgac aattgcgccg gcttcgtgcg aaagcgcgcc tgtgtcccgg
    10561 catacgggca tgaccgcctc ttcgggcatc agccggtagg ttttgtccgc caaaatatcg
    10621 ccgcccgtgc cgtcggcgtg caaatcgggg gcaacgccca aggcattgag cagcttccat
    10681 tcgaagcggc gcaaatcggc aatatggttg gcttcacggc acactgcctc catcactttt
    10741 gccaacgcgt cgtacagttc ggacatcggg tcttcgcgcg cggtcagttt caacaccagc
    10801 tcgttcacat acagaccgct gaacaacgcc ctgccctgcg gctgccgcca tccgcccatc
    10861 cattcggcgc ggtgcagggt tttgagttcc tgactgccgt accacgacac gctggcaggg
    10921 acgaacggaa ccaatacgcc gcgcagctcg ctctgccgtt tgcgcgcgct gcgcgccagc
    10981 aaagccacac gcccgtaacg gcggctgaat gcttcaaccc gcaggctgct ttcgcgccaa
    11041 ggcgaagatg ccagcataaa aacgggttcg tggttgactc ggtgttcgga cataatgcct
    11101 gaaatgccgt ctgaacgctg ccgcgactac aaaacggcag tcggatacga accgatggct
    11161 ttgacaaacg aagcgcgttc gcccaagcgt tccaatgccg tctgaatctg cgcgtcccgg
    11221 cggtgtcctt cgatgtcgat gaagaacagg tattcccaca aaacggattt gctcggacgg
    11281 ctctcaaact tggtcatgga aatacccgat tcggtcagcg gttgcagcag cgaggcaacc
    11341 gcgccggcgc ggttgggcgc ggaaacggcc agcgaggttt tgtcgctgcc gcttgcaccg
    11401 gtttcgtgat gtcccatgac cagaaagcgc gtggtgttgt tcggttcgtc ttcgatgcac
    11461 tcggcaacca tatcgagtcc gtaaatttcc gccgccgtgc gtccggcgat ggcggcaacc
    11521 gtaccgtcgt ccgattcggc aaccagcctt gcggcttcgg cattgctgga cacggcaatc
    11581 cgttcggcgt tgggcagacg cctgcccaac cagtcgttgc actgcgccaa cgcctgcgcg
    11641 tgcgaaaata ctttggcgat accctcggtg ctgccgttgt ttttgcgcaa caggttgtgg
    11701 cggatgcgca aaacgacttc gccgcacgcc tgcaacgcgg taacggcaag caaatccaat
    11761 gtgcgcccga ccgagccttc ggtcgagttt tccacgggcg cgaccagata atccgcctga
    11821 cgggtttcaa cctgtttgaa gcagtcgtct atggtcggac acgccattgt atgcgcggca
    11881 tgaccgaaat gcttgattgc cgcctgctgg gtaaacgtgc cctgcggccc cagataggcg
    11941 atggtcagcg gacgttcgac ggcgaggcac tcgctcatca cttcccgaaa caggcgtgct
    12001 accgattcgt cgggcagcgg gcctttgttc aaatcctgaa tgcggcgcaa cacggcaacc
    12061 tcgcgttcgg ggcggtacac cgcgcccgtg cctttcagct cgccgatggc gtgggcatgt
    12121 tgcgcgcgtt cgttgagcag gcgcaggatt tcggcatcga tggtgtcgat ggcgttgcgg
    12181 tgcgggatga ggagttcgtc gatagtttgg gacataattt cgcctgaacg gtaatttgcc
    12241 gtgcattcta acatcaaatg ccgtctgaag cggtttcaga cggcattttc cgttaaaggt
    12301 attcgctttg cccgttttct ttccacgcac gatgcgagca gagccacaaa agcgcaatgc
    12361 cgcaagaggc ggacgcggtc atggttgccg ccatcacggt tgccgaaccg tcgtgcagga
    12421 cggttgccgc catgcccacg cccgcgccga ttaaggaccg gaatacaccc gacacggcgt
    12481 tcgcgctgcc gccctcttct ttgaaataag acataaagca tgcctgcgtg tccgcaccga
    12541 ccaggccctg cgtaccgacg gaaaacatca cgcacgcaac cggcagccaa aacgggggca
    12601 acccgaaaaa cagcacggcg gcgagttggg acgggttggc ggcaaattgg acgacaatcc
    12661 cccgcagcag gatgctttgc ggatgcgcgc cggttttaag ccgccacgcg gtaacgcggc
    12721 tgaaaaacat catcgtgatg atgttgagtg caaacaccca tgcgtaccgg tgcggcgtaa
    12781 cgtggtagag ctgccggtac acgaaggaag attcggtcag aaaggcgaac atcgaaccga
    12841 agctgaatgc ctgaaaaaac agataaccca tcgcggcacg ggttttcaat acgcgcttga
    12901 accgccccgc caccagcccg aacacatccc tgccgatttt gccgccgacg gcgggattgg
    12961 gcaggaaata ctgtaccaaa ccgggcagca ccggcgaata cgccgccaag aaaacgaaaa
    13021 tcgcccgcca tccgcccaat ccctgcaaca atgcgccgac catgggtgcg gccagcggca
    13081 caaccatcag aatgatgccg ataagggcaa acatctgcgc ggctttgcgt ccggaataat
    13141 aatcgcgcac catcgcaccg acgatgacta cagccatgcc tgcgccgaac gcctgtaccg
    13201 cacgcaggtt aaggagctgt tcggtactcg aagcaaatac gatggcggca acggcaaggc
    13261 aatatacaat caaaccggtc agggcgacgg gtttgcgccc tttgatgtcg gacaccgcgc
    13321 cgccggccac ttgcccgaac gccgtgccga acataaacaa actcagactc tattcgatac
    13381 ggtggatatc cgcgttcagc ggctgcgcca tttcgggaat cgcgggcagg taggcatcgg
    13441 tggaaaacgg catcagcgcg accagtaccg ccatcaaaac cgccatcagt tttccgctca
    13501 tcggaggaag gggcggagac atggtttttc cgttcaaatc aaataaagaa accgtcgcaa
    13561 acgacggtcg gtacgggcgc aagtctaaca tatcggacgg cggggcaaaa ccgaaggata
    13621 tgccgcccga aaccgcttca gacggcattg ccgttttgcg cgtccctgcg cgacagccgg
    13681 ccggcggcga aagtggcggc gatgacgaca aacacgccca aggcggacac gggcgataaa
    13741 tgttcgccca aaatcaaaac cgccaacagc acgccgacga cgggttcgag cgaaatcaac
    13801 agtcccgacg cgttggcagg aacacggctc atccccttgt tccacagcca ataggcgtac
    13861 cagccgcacc ccaaacccaa atacaacagc gacaatacca tcccgacgct ccagtccacg
    13921 gtataacttt gcgccaaagc aagcgaaaac ggcaggcaca tcaacgatgc ggcggcaatg
    13981 gaaacagatg tgaatgccgg tgcgccgatg cgggcaatca gcctttgcgt cggacgcata
    14041 gcggcacaaa agcccgcgcc cgccaacaac accagcaggc agccgaacca gccgacttcg
    14101 ccgccctctt ccgcaccgcc cgccatcagc agcgcgacac cggcaaatgc cgccgcgccg
    14161 catatccagt ggtaggcacg cgctttgtcg ttgaagaaaa agtgtccgac aaacaccatc
    14221 agcagcggct cgagtccgac aatgaccgat gcgctggcgg cggaagtgta tttcaacccg
    14281 acaaactgaa gcagcagggt cagcacatag ttgacgaacg acacaatcag caacggcttc
    14341 cattcctcac gcggaatctt gccgacatga cggcggcagg cgggcagtgc aggcagcgcg
    14401 gcaatcagca ggcgcacgcc gaccatcaat gcgggatcga tgccgccata gacatatttg
    14461 gcggcaataa acgagctgcc ccagataatc agggcaagga tttggtaaaa catagtgagt
    14521 ggtaaagtca gatggtcata caaaagtata gcggattaac aaaaatcagg acaagaagga
    14581 atgcccgaac cgtcattccc gcaacttttc gtcattcccg cgaaagcggg aatctggaat
    14641 ctcggacttt cagataatct ttgaatattg ccgttgttcc aaggtccgga ctcccgcctg
    14701 cgcgggaatg acgaagccat ccttttggcc gaaggtcaaa aatcagccgt caccgagtat
    14761 tacctgaatc acggcgaatg gccggaaaac aacggcgatg ccggcgtggc atcctcctcc
    14821 gacatcaaag gcaaatatgt tgaaagcgtt acggtcgcaa acggcgtcgt taccgcccaa
    14881 atgaaatcag acggcgtaaa caaagaaatc aaaggcaaaa gactctccct gtgggccaag
    14941 cgtgaagacg gttcggtaaa atggttctgc ggacagccgg ttacgcgcaa cggcgacacc
    15001 gttgccgacg ccaacg
//
LOCUS       DAWXHA010000054        14599 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.054, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000054 DAWXHA010000000
VERSION     DAWXHA010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14599
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.054"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            86..2092
                     /locus_tag="AABD07_001240"
     CDS             86..2092
                     /locus_tag="AABD07_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HFB2355771.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFNPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TAPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVGRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGGIIALMALLKIRIGTLDLSPFLASLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLSKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRLPILDAHTAAYQFKSIDIINHPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGFGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKGQGHPPSDKP"
     gene            complement(2215..3306)
                     /gene="mltB"
                     /locus_tag="AABD07_001241"
     CDS             complement(2215..3306)
                     /gene="mltB"
                     /locus_tag="AABD07_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HFB2355772.1"
                     /translation="MEKRKILPLAICLAALSACTAMEARTPRANEAQAPRADEMKKES
                     RPAFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSQAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGRAKFHGARRFYAENRAVIDDVAQKYGVPAELIVAIIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGETLADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(3454..4845)
                     /locus_tag="AABD07_001242"
     CDS             complement(3454..4845)
                     /locus_tag="AABD07_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HFB2355773.1"
                     /translation="MDTAAFLKHIESAFRRIFSDGIDLMRYLPEGKWLALKQAGLLLP
                     FLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQEFGGEAQVAQGL
                     DMIFKGEGGGLGVTEPETSGAAIAREMQSCYEYTDEQTIYVNAAKYWQGNSQSDFLLV
                     AAKERRNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDAEMPATAVMKLSR
                     GDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILDNLNRYVRNDIRFVDYERREIQRRHQ
                     VSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQKLLGAKGFERGHP
                     AGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGIKLDKNQTLLDRLQTDVR
                     FAAVARDYALPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQEEHEDTTAFLLN
                     DIRKDILDCRYCG"
     gene            5066..8770
                     /gene="mfd"
                     /locus_tag="AABD07_001243"
     CDS             5066..8770
                     /gene="mfd"
                     /locus_tag="AABD07_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HFB2355774.1"
                     /translation="MTCPIPKPREKSRWFNLSQGSLPLALARYLPHKRLKAVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSETPYRIDLFDDEIDGIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWNDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKAHSLPDLAVNRQSDDPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSSSQQQTVPASEGEGKAVTDQTE
                     FSASATNPLPSPLPQEREQSAAAVSDGLKAAAVSTESSLYLVASDLHGQTRQQSAPSP
                     VGEGWGEGKAVAAQSAIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIG
                     DPVVHEEHGIGRYTGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHE
                     SVALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINESDYQAFADG
                     FGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAV
                     LAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKATLEGMADGTVDIVIGTHK
                     LVQDDIKFKNLGLLIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGL
                     RDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRER
                     LETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIIN
                     RADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLA
                     MQDLEIRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEI
                     KLHSPALLPEDYCPDIHERLVLYKRLAVCETVQKINAIHEELVDRFGLTEQPVKTLIE
                     SHHLRLAAKELGIDAIDATSEAVTVTFGKHHCIDPTGIILLIQTDKKYRLAGADKLRF
                     AAEMENIEVRINTVKTVLKTLQGKRLPKGN"
     gene            8996..9298
                     /locus_tag="AABD07_001244"
     CDS             8996..9298
                     /locus_tag="AABD07_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2004 domain-containing protein"
                     /protein_id="HFB2355775.1"
                     /translation="MDAFAAFLSELEKADDAARAALTEYLKRDSRYIDFHTEDTQTSR
                     DAAKFVRTMQLIYISLWAKNPAFAVMDYMPANMESDEILAVKLHLDGSIFSIDWES"
     gene            9460..9843
                     /locus_tag="AABD07_001245"
     CDS             9460..9843
                     /locus_tag="AABD07_001245"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HFB2355776.1"
                     /translation="MFRTILGGKIHRATVTEADLNYVGSITVDQDLLDAAGICPNEKV
                     AIVNNNNGERFETYTIAGKRGSGVICLNGAAARLVQKGDIVIIMSYIQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            9865..10707
                     /gene="kdsA"
                     /locus_tag="AABD07_001246"
     CDS             9865..10707
                     /gene="kdsA"
                     /locus_tag="AABD07_001246"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HFB2355777.1"
                     /translation="MDIKINDITLGNNSPFVLFGGINVLEDLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFREAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLENFLIRIKALDDLIKSQPI
                     LTIE"
     gene            10722..11162
                     /locus_tag="AABD07_001247"
     CDS             10722..11162
                     /locus_tag="AABD07_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HFB2355778.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGTVLAAAFAALTRRQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSVAGGSFGMWHGISSMTFMATALLSAVLSWRLSGKEAV"
     gene            11209..12495
                     /gene="eno"
                     /locus_tag="AABD07_001248"
     CDS             11209..12495
                     /gene="eno"
                     /locus_tag="AABD07_001248"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HFB2355779.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEAAEVAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGKKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKCNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAAYYPGKAAFYQLGK"
     gene            12663..12941
                     /gene="ftsB"
                     /locus_tag="AABD07_001249"
     CDS             12663..12941
                     /gene="ftsB"
                     /locus_tag="AABD07_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HFB2355780.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(12982..13272)
                     /locus_tag="AABD07_001250"
     CDS             complement(12982..13272)
                     /locus_tag="AABD07_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HFB2355781.1"
                     /translation="MARIGTNKGLFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLAGEDEGLSDSLLK"
     gene            complement(13393..14547)
                     /gene="nrdB"
                     /locus_tag="AABD07_001251"
     CDS             complement(13393..14547)
                     /gene="nrdB"
                     /locus_tag="AABD07_001251"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009427513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HFB2355782.1"
                     /translation="MSCEHLVMSYSTFPKTKNDALKEPMFFGQPVNVARYDQQKYEVF
                     EKLIEKQLSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVA
                     LLPLVSIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAED
                     IACYYDDLIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYV
                     SFACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAEL
                     QDECFQLFKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFE
                     GANQNPIPWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
BASE COUNT         3500 a         4284 c         3629 g         3186 t
ORIGIN      
        1 caaaccggcg gaaaatgcgc cgcccgccgc agatgcgccc tccccgccat cggggcgttt
       61 aacgccggat tgccgatgcg gtacaatggc agatatgaag aaaattaccc ctcaaaacct
      121 gcgtcccctg ctttcggaaa gcttgggaca taccgatttt gtcaacgtcc tcaacgcatt
      181 gattaaattt ttgcgccgtg gcggcaaaaa atgtgcgggg gagcgtttcg acctgattat
      241 cgacacattc aaacaagaca gggaattact gtcccgcttc agccggtgtt tttacatctg
      301 gctcgcgcaa atacacattt atccggcact catcaaactc ggcattttct cgcgccacag
      361 ctttgcccgg gaaatgggca tacgcatata cgaacgcttc aacccgtcat ataaagattt
      421 tgccaacttg ggcgaagtct tcctttatct tttccattcc gaaaacgacg acaaatggct
      481 gcaaacgctc aatatccgcc aatggctggt tttatacgaa ctcatccgta gccacgccga
      541 gccgtccaaa ttgcagacgg cgggcatccg ccttgccgat gcgcgtttgc gcgccatcga
      601 aatgctgtct gtctggacgg catccgaagc catcgaaccc gatctcatcc gtatcgcccc
      661 gcgcctgctg gaagccgatt cttccttcgt cgccctccaa cgcgaaaccg ccaaactggt
      721 cgaacactac cgcaacggca ccgcgcctta cgacaccgcc cacctcgaag tgatgttcga
      781 ccaatgtttc agccagattg actatttgcg tcgcaaaggg acgggcgccg gctccggttc
      841 gtcggtcaaa gtcgcccacc tgctcgaacg actccggcag accgtaggcc gtctgaagct
      901 gctcacagac atacaaaccg gtgccggcaa cagcaaccgc ctgaccatcg ccctgatgaa
      961 ctccctcatc tacgcggcgg tcgaacaata cagcacccgc cacctgcgcc gcagcagcat
     1021 ccgtatgctc gcccgcagca ttaccgaaaa caaaagccac cacggcgaac actacatcac
     1081 ccgcaaccgc aaagaatatt tcaaaatgtt ctactcggca gcaggcggcg gcggcatcat
     1141 cgccctgatg gcgctgctca aaatccgcat cggcacactc gacctcagtc ccttcctcgc
     1201 ttccttgtcg gctgggttca actacggcat cggctttatg atcatccata tgctgcactg
     1261 caccgtcgcc accaagcagc ccgcgatgac tgccgccagc tttgccgaac aggtcgatct
     1321 caacgaaggc ggcaaagcgg tggacaacaa actctccaag ctcctcatcg acgtatgccg
     1381 ctcccaaagc gtcgccgtct tcggcaacgt ttccatcgcc atccttttgg cgtgcgccat
     1441 atcgttcggc tatgcccatc tgtaccggct gcccatactc gatgcccaca ccgccgccta
     1501 ccagttcaaa tccatagaca tcatcaatca tcctacccta tggtatgccg ctattgcagg
     1561 cttgtggctg ttctgctccg gcatcatcgc aggttttttc gacaaccgcg ccgactacct
     1621 caacctgcgc caacgcctgc ccttcaatcc cttgctgcgt aaaatcatgc gccccgggcc
     1681 ccgccgcgtc ctcgccgcct acatccacaa acactacggc tcgctggtcg gcaacttcat
     1741 cttcggaatg ctcttgggta tgaccggcta tttcggacac ctcctcgggc tgccgctgga
     1801 catccgccac gtcgcctttt cctccgccaa cctcggctat gccgccgtca gcggcaacgt
     1861 cggctttggt acattcgtac tcggcatttt cagcgtcctc gccatcggct tggtcaacct
     1921 ctgcgtcagc ttcagcctcg ccctcttcgt cgccctgcgc tcgcgcggca caaaaatcgg
     1981 cagcatccgc aacctgatca aaagtttttg gaatcagatt aaaagcaatc cttgcatact
     2041 tttcctcccg cccgccaaag gacagggaca tcctccttcg gacaagcctt gaccggcaat
     2101 gccgtctgaa acgggattcg ccccgaatac cgccctgatg cgggaaatcc ccataaaagg
     2161 atgcaaaaat gccgtctgaa ccgaaacgtg gttcagacag cattttaaaa aacattacaa
     2221 tcccgggccg ccgagcgaat tggcaatgtc cctgaccgcc gttacataca tccggctgtg
     2281 gttgtactgc cataccgtat aaaaattgtt caagcccaaa taatattcaa acacgccggg
     2341 tgcggtttcc agtttgaaca aaaccgcctt ttcatcatct gcgagcgttt ccccggggat
     2401 gatgccgtac gccttcaaat ccgccaccgt ccgcgtcagg gcggtttttt cgccaatgat
     2461 tgcctgaaca tccgcacccg gcgccaacgt cgccgacacc aacattttac cgcccgtgcg
     2521 ccaaccgtgc tgcttcatat aattggcaac cgatgccgcg acatcaccga cgttgcccca
     2581 tatatcccga tgtccgtccc cgtcataatc caccgcccat ttccggtagc tcgaaggcat
     2641 aaattgcggc atacccattg cgcccgcata gctgccctta aaggcgaaaa catcgccgcc
     2701 ttcttctttt gccagcttta aaagctcgac caattctttt tggaaaaacc cggcgcggcg
     2761 ggggtaatca aagcctaagg tcgccaatgc gtccgccaca cggaagctgc ccgtattttt
     2821 gccgtaattc gtttcaatcc cgataatcgc cacgataagc tcggcaggca cgccgtattt
     2881 ttgcgccaca tcatcgataa ccgcgcggtt ttccgcataa aacctgcgcg cgccgtgaaa
     2941 tttcgccctg cccgaatttc ccgtgcggaa cacataccac ggacgcgatg tggagggtcg
     3001 gtgcataatc ttgacgatgt ccgccttgta agccgctttg tcaaaaaaat cctgccattc
     3061 cgcctgggaa aaatcccctt tcccgacttc atcgtccaca aaacggcgga catttgcatt
     3121 ggcggcaaac ccgctgtcgg ataccggtac ggctgccgcg tcaaacgcgg ggcggctttc
     3181 ttttttcatt tcatccgcgc ggggggcttg ggcttcattt gcccggggtg tgcgggcctc
     3241 catcgccgta caggcagaca aagccgccaa acaaattgcc agcggcagta tttttctctt
     3301 ttccataaac acattccgaa caaatagggt aagtgggaaa gcggcacaag ggtgcggcgc
     3361 gaaatgcggt atccgccgca atcggcggtt ttgcaaaatg ccgcgcgttg ccttttgcgc
     3421 cgcccgaaat ctgcctgccg ccgtatttgc ccgctatccg caatatcggc agtccaatat
     3481 atctttgcgg atgtcgttca gcaggaaggc tgtggtgtct tcgtgttcct cctgtacgaa
     3541 gacaaagagt cgggcgatga ttttgccgat gaagactttt tgcagggcgc aggcgtcggt
     3601 cagggtgtgt tcctgcagga agctgcggat gtcttcgggc aaagcgtagt cgcgggcaac
     3661 ggcggcaaag cggacatcgg tttgcaggcg gtcgagcagg gtttggtttt tgtccaactt
     3721 aatgcctgct tctttttctt cggcggtggc gcggacgaac tggtcgtaaa tttcggcata
     3781 aagcatatcg ttcgggcctt caaaaatcgt gaaggggcgg atatcgatgg cgatattgcc
     3841 ggctgggtgt ccgcgttcaa aacccttcgc gcccaagagt ttttgcaaca tttgcgcggc
     3901 ggcgtaagtg tattccgtgg cgagggtttt gacgatgttc gcctccatca attgatgggc
     3961 gacgggcgcg acgggcgaaa cggaatggca gacgtagcgg taaaggattt cggaaacctg
     4021 atggcggcgt tggatttcgc ggcgttcgta atcgacgaat ctgatatcgt tgcggacata
     4081 tcggttcagg ttgtcaagga tgtattccat aatgccgtgc gtcatgccga tcagttgcag
     4141 gcggctgcgg ataaagatgt tttggaacgc gcgcaaaccg gcagcgtcgc cccgggagag
     4201 tttcatcacg gcggttgcag gcatttcggc atcgatgcgg ttgacggcgt aacggacggc
     4261 gcgcaggcct tcggatgcga gggtttcgca gcggatgtat gttttgggga cgagcagcag
     4321 gtcgatgact ttggcgagtt tgccgtttct gcgctctttg gcggcaacga ggaggaagtc
     4381 gctttgcgaa ttgccctgcc agtatttcgc ggcgttgacg taaatggttt gttcgtcggt
     4441 atattcgtag caggactgca tttcgcgtgc aatcgccgcg ccggaggttt cgggttcggt
     4501 aacgcccaaa ccgccgcctt cgcctttgaa aatcatgtcc aaaccttgtg cgacttgcgc
     4561 ttcgccgccg aactcttgca gaggctgcaa caccagcgcg ccttcgatgc cggtacgcag
     4621 cgtaacgggc acgccgtaat gccccgcaat ccttaggact tcttggattt caaactgact
     4681 gcccttgcgc ccgccgtgtt ttttgtcgag gaagggcaac agcaaacccg cctgcttcaa
     4741 ggcaagccat ttgccttcgg gcaggtatcg catcaggtcg atgccgtctg aaaaaatgcg
     4801 gcggaatgcg gattcgatgt gctttaaaaa agcagccgtg tccatggttg acggctgcgc
     4861 gctcggttcg gtgtgtatca tcggcttcct ctgtcggttc ccattaatcg gcggccggtc
     4921 aaaccgcctg ccacagttta gagttaattt tctaaacttt accacaaagt gcaccgggca
     4981 acaatccgcc ggcctttcag acggcatcgc gcaccctcac gtgctaaaat gaccgtttgc
     5041 atcactgtcc gccgattgcc gcactatgac ctgccccatc cccaaacccc gtgaaaaatc
     5101 ccgttggttc aatctttcgc aaggctcgct gcccttggct ttggcgcgtt atttgccgca
     5161 caagcggctc aaagccgtgc tgacccaaga tgcggaacag gcgttgcgcc ttcagacggc
     5221 atggcggttt ttccgtccgc acgacacggc ggtgttcctg ccggactggg aaacgctgcc
     5281 ttacgagcgt ttttctccgc atcaggattt ggtgtcggag cggctgtcgg cgttgtggca
     5341 gattaaaagc ggcgcggcgg acgtgttgtt cgtaccggtt gccacggcga tgcagaagct
     5401 gccgcccgtg ccgtttttgg cggggcgcac gttttggctg aaaacggggc agactttgga
     5461 tataggccgc ctgaaaaccg atttggtgga tgcgggctac aatcatgttt cccacgttgt
     5521 cgcggcgggc gagtttgccg tgcgcggcgg cattgtcgat ttgttcccga tgggcagcga
     5581 aacgccgtac cgcatcgatt tgtttgacga tgaaatcgac ggcattaaaa ccttcgatac
     5641 cgacacgcag cgcaccattt cccccgtttc cgaaatccgc ctgctgccgg cgcacgagtt
     5701 ccccaccgac agcgaggcgc aaaaaatctt ccgcagccgc ttccgcgagg aagtcgacgg
     5761 taatccgaac gatgccgccg tgtacaaagc cgtcagcaac ggccacttcg gcgcgggcgt
     5821 ggaatattat ctgccgctgt tttttgaaaa cgagctggaa acgctgtttg actatatcgg
     5881 cgaagatgcg ctgtttgtct ctttgggcga tgttcatgcc gaggcaaacc gcttttggaa
     5941 cgacgttaaa tcacgttacg ccatggcgca gggcgacgaa acctatccgc ctttgcttcc
     6001 acagcatttg tatctctctg ccgatgtgtt cgcaggccgt ctgaaaaact acggacaagt
     6061 tctgcctgat gtttccggca aggcacactc cctgcccgac cttgccgtca accgccaatc
     6121 cgacgatcct ttgcaggcat tgaaggattt tcagacggcc tttgacgggc ggattttgct
     6181 gtgcgccgaa agtttgggac ggcgcgaaac catgctcggt ttcttgcagc aaaacggttt
     6241 gaaagccaaa cctgtgtccg actggcaggg cttcttgtcg gcgcacgagc cgctgatgat
     6301 tacggtcgcg ccgttggctt acggattcaa actgggcgga ctgcaatctt caagccaaca
     6361 gcaaactgtt cccgcctccg agggagaagg caaagcggtt accgaccaaa ccgaattttc
     6421 cgcatccgca acaaaccctc tccccagccc tctcccgcag gagagggaac aaagtgccgc
     6481 cgccgtttca gacggcctga aagcagccgc cgtttcaacc gaaagcagcc tgtatctcgt
     6541 cgcaagtgat ctgcacgggc aaacccgaca gcaatctgcc ccctcccccg tgggggaggg
     6601 ttggggagag ggcaaagcgg ttgccgctca aagtgccatc gccgtcatca ccgaatccga
     6661 tctttaccaa tacgtcgccc gttcgcgcgt ccacaaccgc cgtaagaaac acgccgccgt
     6721 ttcagacggc ctgttgcgcg accttgccga aatcaatatc ggcgatcccg tcgtgcacga
     6781 agaacacggc atcgggcggt atacgggctt ggtaacgatg gatttaggcg gcgaaaccaa
     6841 cgaaatgatg ttgctcgaat acgcgggcga agcgcagctt tatgtgcctg tttcgcaact
     6901 gcatttaatc agccgctact ccggtcaggc gcatgaaagc gtcgccctgc acaagctcgg
     6961 cagcggcgcg tggaacaagg cgaagcgcaa agccgccgaa aaagcgcgcg ataccgccgc
     7021 cgagttgctc aacctctacg cccaacgcgc cgcccaatcg ggacacaagt ttgaaatcaa
     7081 cgagtcggac tatcaggcgt ttgccgacgg cttcggctac gaggaaaccg aagaccaggc
     7141 cgccgccatc gccgccgtga ttaaagattt gacgcaggcg aagccgatgg accgacttgt
     7201 gtgcggcgat gtcggtttcg gcaaaaccga agtcgccctg cgcgccgcgt ttgtggcggt
     7261 gatgggcggc aaacaggtcg ccgtactcgc cccgaccacg cttctggtcg agcagcacgc
     7321 gcaaaacttc gccgaccgtt tcgccgattt ccccgtaaaa gtcgccagcc tttcgcgttt
     7381 caacaacagc aaagccacca aagccacgct cgaaggcatg gcggacggta ctgtcgatat
     7441 cgttatcggt acgcacaaat tggtgcagga cgacataaaa ttcaaaaact taggtttatt
     7501 gattatcgat gaagaacacc gcttcggcgt gcgacagaaa gagcagctca aacgcctgcg
     7561 cgccaatgtc gacatcctaa ccatgaccgc cacgccgatt ccgcgcaccc tcagcatggc
     7621 gctcgaaggt ctgcgcgact tctcgctgat taccactgca ccgagccgcc gcctcgccgt
     7681 gaaaaccttt gtcaaaccgt tcagcgaagg cagcgtgcgc gaagccgtgt tgcgcgaact
     7741 caaacgcgga ggacaggtat ttttcctgca caatgaagta gatacgattg agaatatgcg
     7801 cgagcggctg gaaaccctgc tgcccgaagc ccgtatcggc gtggcgcacg gacaactgcg
     7861 cgagcgcgag ctggaacaag tcatgcgcga ctttttgcag caaagattca atgtgttgct
     7921 ctgttccacc atcatcgaaa ccggcatcga catccccaac gccaacacca tcatcatcaa
     7981 ccgcgccgac aaattcgggc tggcccaact gcaccagctt cgcggacgcg tcggccgcag
     8041 ccaccaccaa gcctacgcct acctgctcac gcccgaatac atcaccaaag acgcagaaaa
     8101 acgcctcgac gccatcgcgg cggcagacga actcggcgca ggtttcaccc tcgccatgca
     8161 ggatttggaa atccgaggcg caggcgaaat cctcggcgaa ggacaatccg gcgaaatgat
     8221 gcaggtcggc ttcacgctct acaccgaaat gctcaaacag gccgtgcgcg acctcaaaaa
     8281 aggccgccaa cccgacctcg acgcaccgtt gggcattacc accgaaatca aactgcacag
     8341 cccggcatta ctgcctgaag actactgccc cgacatccac gagcgcctcg tcctctacaa
     8401 acgcctcgcc gtatgcgaaa ccgtgcagaa aatcaacgcc atacacgaag aactcgtcga
     8461 ccgcttcggc ctgaccgaac aacccgtcaa aaccctcatt gaaagccacc acctgcggct
     8521 tgcggcaaaa gaactgggta ttgatgccat cgatgccaca agtgaagccg taaccgttac
     8581 cttcggcaaa caccactgta tcgacccgac ggggattatc ctgctgattc agacggataa
     8641 aaaataccgg ctggcagggg cagacaaatt gaggtttgca gcggaaatgg aaaacatcga
     8701 ggtcaggatc aataccgtca aaaccgtact aaaaaccctg caaggcaaac gcctgcccaa
     8761 aggaaattga tgtaacgatg ccgtctgaag aacaccgttc agacggcata caatccccca
     8821 atcctcacca aaaggaacaa tcatgtcgat ttttcacccc tatttccaac aactgtccac
     8881 cgaaggtttt gacggagaag aagatgtcct ctgggaagac gagctgaccg tcaaaggcaa
     8941 tcttgtcgag gtattcctgt aggcagaaaa tgaaaacagc ctgccaaccg aaacattgga
     9001 tgcatttgcc gccttcctgt ccgaattgga aaaagccgac gatgctgcac gcgccgcact
     9061 gacggaatat ttgaaacggg acagccgcta tatcgacttt cacaccgaag atacccaaac
     9121 aagccgtgat gcggcaaaat ttgtccgcac tatgcagttg atctatatca gcttatgggc
     9181 aaaaaatccg gcttttgccg ttatggatta tatgcccgcc aatatggaaa gcgacgaaat
     9241 ccttgccgtc aaactgcatt tggacggcag cattttctca atcgattggg agagttgagc
     9301 cggattgcca atcggcaaaa atgaaatgcc gtctgaaaac agcttccctg cccgaagcct
     9361 tgccattatg aatttgaagg aaactccact ataatacggc attcagattt tcagacggca
     9421 tcacgcccgt cagaccgcac acaaaccaaa aggaaataca tgttccgtac tatacttggc
     9481 ggaaaaatcc accgcgccac cgtaaccgaa gccgatttaa actacgtcgg cagcattacc
     9541 gtcgatcaag acctgttaga cgcggcaggc atctgcccca acgaaaaagt cgccatcgtc
     9601 aacaacaaca acggcgaacg ttttgaaacc tataccattg cagggaaacg cggcagcggc
     9661 gtgatttgcc tgaacggtgc tgcagccagg ctggtacaga aaggcgacat cgtcatcatt
     9721 atgtcttata tccaactttc cgaaccggaa atcgccgcac acgaacccaa agtcgtctta
     9781 gtggacggaa acaataaaat ccgcgacatc atctcctacg agccgccgca caccgtactg
     9841 taatcccgca aacggacatc gattatggat attaaaatca acgacatcac cctcggcaac
     9901 aattcgcctt tcgtcctatt cggcggcatc aacgttttag aagatttgga ttccaccctc
     9961 caaacctgtg cgcattacgt cgaagttacc cgcaaactgg gcatccccta tatctttaaa
    10021 gcctctttcg acaaggcaaa ccgctcgtct atccattcct atcgcggcgt aggcttggaa
    10081 gaaggcttaa agatttttga aaaagtcaaa gcagagttcg gcatccccgt cattaccgac
    10141 gtacacgaac cccatcaatg ccaacccgtc gccgaagtgt gcgatgtcat ccagcttccc
    10201 gcctttcttg cgcggcagac cgatttggtg gccgcaatgg cggaaacggg caatgttatc
    10261 aacatcaaaa aaccccagtt cctcagccct tcgcaaatga aaaacatcgt ggaaaaattc
    10321 cgcgaagccg gcaacgggaa gctgatttta tgcgaacgcg gcagcagctt cggctacgac
    10381 aacctcgttg tcgatatgct cggtttcggc gtgatgaaac aaacctgcgg caacctgccg
    10441 gttattttcg acgttaccca ttccctgcaa acccgcgatg ccggttctgc cgcatccggc
    10501 ggtcgtcgcg cacaggcttt ggatttggca cttgcaggca tggcaacccg ccttgccggc
    10561 ctgttcctcg aatcgcaccc cgatccgaaa ctggcaaaat gcgacggccc cagcgcgctg
    10621 ccgctacacc ttttagaaaa ttttttaatc cgcatcaaag cattggacga tttaatcaaa
    10681 tcacaaccga ttttaacaat cgagtaacac ggtttcgcct tatgatgcag actttccgaa
    10741 aaatcagcct gtatgccgca accttgtggc tcggtatgca gattatggca ggttatatcg
    10801 ccgcaccggt gctgttcaaa atgctgccca aaatgcaggc gggcgaaatt gccggcgtat
    10861 tgttcgacat cctctcttgg agcgggcttg ccgtttgggg cacggtactg gctgccgcct
    10921 ttgccgccct aacccggcgg caaaccgccc tgctgctttt tttattgtcc gcccttgccg
    10981 ccaaccaatt tttggttaca cccgttatcg aggcactgaa atacgggcat gaaaattggc
    11041 tgttgtcggt tgcaggcgga tccttcggaa tgtggcacgg tatttccagc atgactttca
    11101 tggcaaccgc cctactttca gcagttttaa gttggcggct ttccggcaaa gaggccgtct
    11161 gaagccctcc cattttttac ctcccttcac ttcacttgga gaacattcat gagcgcaatc
    11221 gttgatattt tcgcccgcga aattttggac tcgcgcggca accccacagt cgagtgtgat
    11281 gtattgctcg aatccggcgt aatgggacgt gcggccgtac cgagcggcgc atccaccggt
    11341 cagaaagaag ctttggaact tcgcgacggc gacaaatccc gctattccgg caaaggcgta
    11401 ttgaaggcgg tcgaacacgt caacaaccaa atcgcccaag ccctcatcgg tatcgatgcc
    11461 aacgagcaat cttatatcga ccaaatcatg atcgaattgg acggtactga aaacaaaggc
    11521 aatttgggtg cgaatgcgac tttggcggtc tctatggcgg ttgcacgcgc cgctgccgaa
    11581 gactcaggcc tgccgcttta ccgctacttg gggggcgcag gtccgatgtc cctgcccgta
    11641 ccgatgatga acgtcatcaa cggcggcgaa cacgccaaca acagcctgaa catccaagag
    11701 tttatgatta tgcccgtcgg cgcaaaatct ttccgcgaag cgttgcgctg cggtgcggaa
    11761 attttccacg ccttgaaaaa actgtgcgac agtaaaggct tcccgaccac agtcggcgac
    11821 gaaggcggtt tcgcccccaa cctgaacagc cacaaagaag ccctgcaact gatggtcgaa
    11881 gcggccgaag tcgccggcta caaggcgggc gaagacgtat tattcgcatt ggactgcgcg
    11941 tccagcgagt tctacaaaga cggcaaatac cacttggaag ccgaaggccg ctcctacacc
    12001 aacgcggaat ttgccgaata cttggaaggc ttggttaacg aattcccgat tatttccatt
    12061 gaagacggga tggacgaaaa cgactgggaa ggctggaaac tgctgaccga aaaattgggc
    12121 aaaaaagttc aattggtcgg cgacgacttg ttcgtaacca atccgaaaat tcttgccgaa
    12181 ggcatcgaaa aaggcgtagc aaacgcattg ctggtcaaag tcaaccaaat cggtacttta
    12241 agcgaaaccc tgaaagccgt cgatctggca aaatgcaacc gctacgccag cgtgatgagc
    12301 caccgctccg gcgaaaccga agacagtacc attgccgact tggcagtcgc caccaactgt
    12361 atgcagatta aaaccggttc tttgagccgt tccgaccgca tggcgaaata caaccaactg
    12421 ctgcgtatcg aggaagaatt ggcggaagcc gcctactacc ccggcaaagc cgcattctac
    12481 caactgggca aataaataaa aaagtggatg tatgtttcaa cacacagggc aacacatgaa
    12541 gcgtcgccct gtgtgttgac ctgatttgga agaggttaca cctctcccaa ataaagtcta
    12601 attttaccgc cacgaaggac ggacatccga gtggtggggt ttcaaccagt aaggaaacgt
    12661 tgatgaagtg ggtaactgtc gttttatcct tcgcacttgt ctgttgccaa tacagcctgt
    12721 ggttcggcaa aggcagcatc ggacgcaaca gcagtctgag agaacagatt gccgttcaag
    12781 aagaaaaaaa ccagacactc gccctacgca atcattccct tgccgccgaa gtctatgatt
    12841 tggaaaacgg tcaagaagcc atttcggaaa tcgcccgggt agaactgggt tatatccaag
    12901 acggcgaaac cttttaccga ctcatcaggc ataaccggta ataccgtcaa aaagccgtcc
    12961 gaaccaatgt tcggacggct tttatttcaa caaactgtca gacagcccct catcctcccc
    13021 cgccaaaccg caatccagcc tgacatcccc ctcgacgcaa cagcagcacg gcagtatctc
    13081 gtcccgcccc aaaaaagcca aaggcggctc ccgataagta acgcttccct ccaaaatctt
    13141 tacccggcac gatccgcaat atccgcttcg gcactgatat tccaccatat gccccgtccg
    13201 ttccaagcct tccaacaggg tctcaccctc caagagctca aaaaggccct tattcgtacc
    13261 aatgcgcgcc atttccgacc aatcaaaaat aaaaggaaca ataaccgatc ctacctgctg
    13321 tttttcccat catacaacac acaaatgccg tctgaaacat ccggcttcag acggcatttt
    13381 ttcaaaaaac atttacaact caaaatcgcc caagtcatcc gtattcactt cagaatcgat
    13441 ttgaccaatc aaataagagg atatttccac ttcctgcggc gcgacctgta cgttgtcgga
    13501 cgacagccac gcattaatcc acggaatcgg gttttgattt gcgccttcaa atccggccgg
    13561 cagccccacc gcctgcatac gcagattggt aatatattcg acgtattggg ataagatttc
    13621 tttgttcaaa ccgatcatcg aaccgtcttt aaacaaatat gccgcccatt ctttttcctg
    13681 ttccgccgct tttttgaaga gttggaaaca ttcgtcctgc aactcggcgg caatttccgc
    13741 catttccgga tcatcaacac ccgaacgcat cagattaagc atatgctgcg tgccggtcag
    13801 gtgcagggct tcatcgcggg caatcagttt gatgattttg gcgttgcctt ccatcaactc
    13861 acgctcagca aaagcaaacg agcaggcaaa tgaaacgtag aaacggatgg cttccaacac
    13921 attgacgcac atcaggcaga gatagagttt tttcttcaac ccgcgcaaag acacagtaac
    13981 gggttttccg ccgacattgt gcaccccttc gcccaacagg ttgtaatatt gggtgtattc
    14041 gattaaatca tcataatagc aggcaatgtc ttcggcgcgg gcggtaatgt attcgttttc
    14101 gacaatatca tcaaacacga ccgacggatc attcacaata ttgcggatga tgtgggtata
    14161 gctgcgcgag tggatggttt cgctgaagct ccacgtttca acccaagttt ccagctcggg
    14221 aatcgaaacc aaaggcagca aggcaacatt cggactgcgc ccttggatgg aatcgagcag
    14281 tgtttgatat ttcagattgc tgatgaaaat atgtttttcg tgttcgggca ggttggcgta
    14341 gtcgatacgg tcgcgcgaca cgtcgatttc ttccggccgc caaaaaaacg acaattgttt
    14401 ttcaatcagt ttttcaaata cctcgtattt ctgctggtca taacgggcga catttaccgg
    14461 ctgaccgaaa aacatcggct ctttcagcgc gtcgtttttg gttttgggaa aggtgctgta
    14521 tgacatgact aggtgttcgc aggacataac gtctctcttt ttaaaaatta gtcgactttt
    14581 ctattaattt ttaattcac
//
LOCUS       DAWXHA010000055        14463 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.055, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000055 DAWXHA010000000
VERSION     DAWXHA010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14463
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.055"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..101
                     /locus_tag="AABD07_001252"
     CDS             <1..101
                     /locus_tag="AABD07_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HFB2355783.1"
                     /translation="VFACALGALVASEHGATPDISAERIGRFINPV"
     gene            complement(161..718)
                     /locus_tag="AABD07_001253"
     CDS             complement(161..718)
                     /locus_tag="AABD07_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HFB2355784.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQILQAATQVSDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFVPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCEDKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(793..2427)
                     /locus_tag="AABD07_001254"
     CDS             complement(793..2427)
                     /locus_tag="AABD07_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HFB2355785.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELRPFNDT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEALNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEIDKCARATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESAVYYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2825..3931)
                     /gene="serC"
                     /locus_tag="AABD07_001255"
     CDS             complement(2825..3931)
                     /gene="serC"
                     /locus_tag="AABD07_001255"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HFB2355786.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLRTAQQEMSDYNGTGFSVMEMSHR
                     SEMFLSILHHAEQDLRQLLKIPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSDGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINDIHPDARSKMNVVFKTASEDLDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4297..4728
                     /gene="rimP"
                     /locus_tag="AABD07_001256"
     CDS             4297..4728
                     /gene="rimP"
                     /locus_tag="AABD07_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HFB2355787.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELAAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIGYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4756..6258
                     /gene="nusA"
                     /locus_tag="AABD07_001257"
     CDS             4756..6258
                     /gene="nusA"
                     /locus_tag="AABD07_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HFB2355788.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPDTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIAGGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDRLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMNHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGVDADM
                     LLSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6270..9101
                     /gene="infB"
                     /locus_tag="AABD07_001258"
     CDS             6270..9101
                     /gene="infB"
                     /locus_tag="AABD07_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HFB2355789.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVGGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVQPEQTAEDAVKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEPKEKAVKPKHERNGKGKDAKKPAKPAAPAVPQPVVSAEEQAQ
                     RDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQAKAAQEAKTGRQRPAKPAE
                     KPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGKGAKGGRDRNNARNGGDERV
                     RGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVADLAHKMAVKGVEVVKALMKM
                     GMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAVEAEALPRPPVVTV
                     MGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITFLDTPGHEAFTAM
                     RARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDKDTANPERIRQ
                     ELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVDAPAKGIIV
                     EARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGPSIPVEI
                     LGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGETQA
                     QSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAFII
                     GFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ
                     VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFE
                     CGLMLKGYNEIMEGDQLECFDIVEVARTL"
     gene            complement(9261..10601)
                     /locus_tag="AABD07_001259"
     CDS             complement(9261..10601)
                     /locus_tag="AABD07_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HFB2355790.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADMLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQLPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLAGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAAKLPPELNKARSHWKWSSLNTHRPETSRAERREYAEKIGIRLAGK"
     gene            complement(10675..12015)
                     /locus_tag="AABD07_001260"
     CDS             complement(10675..12015)
                     /locus_tag="AABD07_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HFB2355791.1"
                     /translation="MLNPSRKLVELVRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRDRMLRDTLERVRAGSFWLWVVAASMMFTAGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLATLFLRVKVGRFFSSPATWFRGKGPVNQAVLRLYADQWRQPSV
                     RWKIGATAHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPS
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIVCYGILPRLLAWVVCKILLKTSE
                     NGLDLEKTYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWALMLETEWQDGQ
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALTECGAAWLEPDRVAQEGRLKDQ"
     gene            12158..12784
                     /locus_tag="AABD07_001261"
     CDS             12158..12784
                     /locus_tag="AABD07_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HFB2355792.1"
                     /translation="MYAGERFNTYSHLSGLILAAAGLMLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYIVMGWMVLAVMKSLTASLPPAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(12849..14267)
                     /locus_tag="AABD07_001262"
     CDS             complement(12849..14267)
                     /locus_tag="AABD07_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HFB2355793.1"
                     /translation="MENILSVLVGTVNRFLWGYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWLSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIVALGFIGNATQANSIASAVTIAFDVPSLAVGIVFAVLAGMVVIGGVNRIANIA
                     RFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMTAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFAFTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWNLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     MRKKAGQDLSYQYEFHEFHDKQ"
BASE COUNT         3712 a         4144 c         3722 g         2885 t
ORIGIN      
        1 aggtctttgc ctgcgcactt ggtgcgctgg tcgcctccga acatggcgca acacccgaca
       61 tttccgccga acgcatcggg cgtttcataa acccggttta aaatgcatgg aaaaatgccg
      121 tctgaaagcc tttcagacgg cattttgttt gagattccgt ttaccaatgg ctgacaaacg
      181 cttccaaatc ggtattcttg ggcttatgca cttcctctgt cggcgtgccg accatcatca
      241 gcccgatgat tttatcctta tcctcgcaac cgaaagcctc ccgcaacaat gggctgttga
      301 cccacatccc cgtaatccag acattgtcga atccctgagc cgttgccgcc agttgcagcg
      361 catacgccgc acaacccgcc gtcagcatct gctcccattc cggtttcggc ttaggcacat
      421 cgcggttcgg cacaaacgtt accccgatga ccatcggcgc catattgccc actttttccg
      481 cctttttcat cgcatcgtcg ccgaaattca gttcggcaac cgtttgcttc aacacatcgc
      541 gaaaacgttg caatcctacc tcgccttgaa tcacggtaaa acggaagggg cgcatgttgc
      601 cgtgatcgga aacttgggtt gccgcctgca atatttgttc caactccgcc gcatcggggg
      661 cggggtgctt cagctttttg gaagatcggc ggttcgtcaa taattttaaa gcatccatat
      721 cgttatactc cggtcatcgg tcgggtgttt cggacacata tgccgtgaag gcttcagacg
      781 gcatatccgg catcagcgcg gacggcggca ggctgccaat atatccattt ccttccgata
      841 ggtttggctg ttggaaatgt ccatcagccc caataccgtg ctgaaatagt ggtcgtgcga
      901 atattcgttt tccgccgctt tttgtttgag gcattggaaa tctatgcccc cgtgttggcg
      961 gaaggctttg gaaaaccaca taaccatcgg gatatgcgtc tgtccggaag gcgcgatggc
     1021 gtaaggcgcg gcgtgcaggt acatcccgtt ttcgcccaaa ctttcgccgt ggtcggaaac
     1081 ataatacacc gcgctttcca aatcgtcgcg gttttcaagt ttgcggataa ccttgtcgat
     1141 aaactgatcc acatacaaaa ccgtattgtc gtaagtgttg accaacgtgg cgcgggcgca
     1201 tttgtcgatt tcgttggtat cgcatgtcgg cgtgaatttg cgctcggctt cggtatagcg
     1261 ttcgtaatac gtcggcccgt ggctgccgat ggtatgcagg attaaaaccg cgtctttatc
     1321 gtttttgttg agggcttcgt cgaacttggt caacaggata ttgtcgaggc actcgccgtt
     1381 gcggcagtat tcgggcaggt tgagcgaggt aacgtcggta ttcggcactt tgccgcacac
     1441 gcccttgcag ccggaatcgt tttccaacca agtaacttcc acgccggcgc gctgtacgat
     1501 gtccagcagg ttgtcttggt gttcggcttt gatttcgtca taatccgtgc ggtcgaaggt
     1561 tgagaacata cacggcaggg agtgcgcggt cgatgtgccg cagcttctga cctgcgggaa
     1621 attgacaatt tcatcgccgc gcgcggcaag cagcggcgta gtttggcggc tgtaaccgtt
     1681 caaaccccag ttggcggcac gcgtagtctc gcccacgacc agcaccacga aacggcgcag
     1741 gctgccggcc ggccggtttt gcacgaccgc catatccaat tgcgtataag gaatattgga
     1801 acgcttccaa tctttgtatt tcgacacgcc cgcgccgatg aaattagacg gcacaatcag
     1861 atgggttact gatttattgt tgcggaaaaa cgaggcgtaa tcctgatatt gcaacatcgc
     1921 gatgcccaac gcgcacaaaa aggaaacggc ggcaagcaca aggcgcgtca aaagctcctt
     1981 ataccaaacg cggtatttga ccttgacggc gatatatgcc agcgcgggca atacgcccaa
     2041 acatacaatc cacagcacat agcccggcgt aatcaggcgc gcgctttccg ccgccgtggt
     2101 ttgcaagaca ttattcaaca tcgacttgtt gaaatagata ttgaaaaata tttcttggta
     2161 agacaccgcc gcactgataa ccaatatcaa tggaatcaat actttatgca caaaaggcag
     2221 ggcaatgacg tgaaaaacga aattacttaa aaaaaacagc accaccggca tcgtatagag
     2281 gaagatgtcc gccccggtgt cgttaaaagg gcgaagttcg acaactttgg caaaaaaggc
     2341 gtaattcaat accagcgaag aatacaggga aagaaaggca atcagcgcgg aagagccgag
     2401 cttcggcctc aggttcggtt ttatcatttg gaatgtgtcg gataagggtt ggaaaaggca
     2461 tccggaatcc ggattattga aaaagattct taattataag gcaacggagc aaagcagggc
     2521 aagaaaacga gtaggcggcg cgggggtttc cgcccgccat tcaaacgtcc ggcagacata
     2581 aaaacatcgt aagcaaaatt cgaaccggtc tgcaaccgcc cctgccggaa aagcgggcaa
     2641 agcatttcat attggaaaaa cccggccgcg ccgccgacgg gacagtccgg cacaaacagc
     2701 atcacgcccg gattgaaaag gacggatagc cgccggcagc acaatcttac cacctccaaa
     2761 acgccgccgg agaacgccga aacagccgat gccgtctgaa acgcattcgg gcggcatttg
     2821 aaaatcaacc gtaacgccgt tggaaatcgc gcataaaatc tgccaaagcc cgcacgcctt
     2881 caagcggcat cgcattataa atgctggcgc gcatcccacc gacagactta tagcccttca
     2941 acaggcacaa gccctgcaat tcggcttcca gcacaaaacg gcggtccaag tcttcgcttg
     3001 cggttttgaa gaccacgttc attttggagc gcgcatcagg atgaatatcg ttgatgtaaa
     3061 aaccgccgct gccatctatc gtctcataca aggtttgcgc cttcagccga ttgaccgctt
     3121 caattttttt cacaccgccc tgcgcctgca gccagcggaa caccagcccc gacatataaa
     3181 tcgcgtaagt tgacggcgtg ttgtacatac cgtcgcggtt caaatgagaa cggtagttga
     3241 acacatcggg aatatcgttc ggacaacgct cgagcaaatc ctcacgcaca atcaccaccg
     3301 taactcctgc cggcccgatg tttttctgtg cgcctgcgta aatcagtccg tagtcggcaa
     3361 catcaaactc acgcgacaga atctcgctgg acatatcgca caccaacggc ggcatgccgt
     3421 ctgaaaggcg cggcacttca cggtattgca gcccgttgac agtttcattg acggcaaaat
     3481 ggacaaacgc cgaatcgggt gcaacatccc acgtttccac aggcggcagg tcgagatagt
     3541 cgaactgctc gcccccgtgc gccgccaaac ggatttccgt atcggtcaaa cggctcatct
     3601 gttcataggc gatacggctc cagttacccg ttaccaccgc gtcggcagtg cggaaaccgt
     3661 gtgccagatt catggctgcc atattaaatt gggttgttgc tccgccctga agaaacaata
     3721 tcttatagtt gtcagggatt ttcaaaagct gcctcaaatc ctgttccgca tgatgcagga
     3781 tgcttaaaaa catttccgaa cggtggctca tttccatcac ggaaaaaccc gtaccgttgt
     3841 agtccgacat ttcctgctgc gccgtcctca acacagcttc aggcaacacg gcagggccgg
     3901 cggaaaaatt gtaaatcgga taaagagaca tgatgcagcc ctggttctga acaataaccc
     3961 gcccgatttt aggcttgcag caggctttgt gcaaggatgg gaaatacctg ccctccgccc
     4021 gattccatgc cgcccgaaca cggaaaataa tatcaatata ttgatttaca aacataaaaa
     4081 tcatgctagc gacaaataga tacatttgtt ttgtcaacaa tattcacgat ttcccattac
     4141 aaacctcccg tacacccgct tttttccgtc ccaaaaacac aaaataaatc aacactttca
     4201 tttctccgca aaagcggtta taatcacgcc gatttttcaa cttttgacga aaaatggcca
     4261 cggggccatt tttttattat gtacataggg agcagcatgg atattcaaac catcctcgaa
     4321 aaaaccctgc ccggcctggg atacgaactg gtcgatttcg aactggccgc gcaaggaaca
     4381 ttgcgcgtgt tcatcgacaa agaaggcggc attaccgtcg aagactgcgc caccgtcagc
     4441 aaccacttga gccgcgtctt catggttgaa gacatcggct acaaaaacct ggaaatttcc
     4501 agccccggac tcgaccgccc cttgaaaaaa gccgccgact tcgtgcgctt tgccggtcag
     4561 aatgccaaaa tcaaaacccg cctgccgata ggcggtcaga aaaactttat cggtaaaatc
     4621 gaaggctgcg aaaacgacac tgttaccgtt tccttcgacg gcaaaaccgt gcaaatcgaa
     4681 ttgggcaaca tcgacaaagc ccgcctgcgc cccgaattca aattctaaaa cacagcaata
     4741 ttggagatgt tcaaaatgag tcgtgaaatg ttacagctgg cagaagcact ggcaagcgaa
     4801 aaaaacgttg atgcggaagt cgtcttccaa gcactggaat tcgcactctc taccgccgcc
     4861 aagaaaaagg cagaccgcga acacatggac gtgcgcgtcc aaatcaaccg cgataccggc
     4921 gaataccaaa ccttccgccg ctggctgatt gtggccgatg aagactatac ctatcccgat
     4981 gtcgaaaaaa ccatcgagga aatccaagag gaaatccccg atacgaccat ccaaatcggc
     5041 gaatactacg aagagcagct gcccaacgaa ggcttcggcc gccaagcggc gcaaactgcc
     5101 aaacaaatca tcctgcaacg catccgcgat gccgagcgcg agcagaatct gaacgagttc
     5161 ctcgccgtca aagaagacat cgtgtccggc acggtcaaac gcgtcgaacg ccacggcatc
     5221 atcgtcgaag tcgttgccgg caaactggac gcgctgattc cgcgcgacca aatgattccg
     5281 cgcgaaaact tccgcagcgg cgaccgcatc cgcgccctct tcctgcgcgt cgaagaaatc
     5341 ggcaacaccg gccgcaaaca agtcatcctg agccgtactt ccggcgattt cctcgtcaaa
     5401 ctgtacgcca atgaagtacc tgaaattgca ggcggcatgc ttgaaatccg cgctgtcgcc
     5461 cgcgacccgg gccagcgtgc caaagtcgcc gtcaaagcca acgaccagcg catcgatccg
     5521 caaggcacct gtatcggcgt tcgcggttcg cgtgtcaatg ccgtcagcaa tgaattgtcc
     5581 ggcgagcgca tcgacgttgt cctttggtcg cccgagcctg cccaattcgt catgagcgcg
     5641 ctctcacccg ccgaagtcag ccgcatcgtc atcgacgaag acaaacacgc cgtcgatgtc
     5701 atcgttgccg aggaccggct cgcgctcgcc atcggacgcg gcggtcaaaa cgtgcgcctt
     5761 gcttccgacc tgaccggctg gcagctcaac atcatgactt ccgccgaagc agacgaacgc
     5821 aatgcggcag aagatgccgc catccgccgc ctgtttatga atcacttgaa tgtagatgaa
     5881 gaaaccgccg acgtactggt tcaagaaggt tttgcaacct tggaagaagt cgcctatgtt
     5941 cctgccgccg aactgcttgc cattgaagga tttgacgaag aaatcgtcga tatgctccgc
     6001 aaccgtgccc gcgatgccat cctgaccatg gcgattgctg ccgaagaaaa actgggcgaa
     6061 gtgtccgacg atatgcgtaa cctcgaaggc gtagatgccg atatgctcct cagccttgcc
     6121 gaagcaggca ttaccacccg cgacgacttg gcagagcttg ccgtggacga actgattgaa
     6181 atcaccggtg taaacgaaga aactgcaaaa gccgtcatcc tgaccgcacg cgaacactgg
     6241 tttaccgaag acaaataaag ggggtacaga tgagtaacac aaccgtagaa caatttgccg
     6301 ccgagctgaa acgccccgtc gaagacctgt tgaaacagtt gaaagaagcc ggcgtcagca
     6361 aaaacagcgg cagcgattcc ctgacgctgg acgacaaaca gcttctgaac gcctacctga
     6421 ccaagaaaaa cggcagcaac ggcggcacca tcagcatccg ccgcaccaaa accgaagtca
     6481 gcaccgttgg cggcgtaaaa gtcgaaacac gcaaacgcgg acgcactgtc aacattcctt
     6541 ctgccgaaga attggcagca caagtaaaag ccgcccaaac ccaagccgca cctgttcagc
     6601 cggagcagac ggcagaagac gcggtaaaag cccgagccga agctgccgca cgcgcagaag
     6661 cccgtgccaa ggcagaagcg gaagcggcaa aactgaaagc ggcaaaagca ggcaacaaag
     6721 ccaaacctgc cgcgcagaaa cctaccgaag caaaagccga aaccgcaccc gttgcggcgg
     6781 aaaccaaacc cgccgagccc aaagaaaaag ccgtcaagcc gaaacacgag cgaaacggca
     6841 aaggcaaaga tgccaaaaaa ccggcgaaac ctgccgcacc tgccgtgccg caacccgtgg
     6901 tcagcgcgga agaacaggcg caacgcgacg aagaggcgcg ccgcgccgcc gcattgcgcg
     6961 cccaccagga agccctgttg aaagagaaac aggaacgcca ggcacgtcgc gaagccatga
     7021 aacaacaggc agaacaacag gcaaaagccg cacaggaagc caaaaccggc agacagcgtc
     7081 ccgccaaacc tgccgagaaa ccgcaggcag ccgcaccggc cgtcgaaaac aaacctgtca
     7141 atccggcaaa agcgaaaaaa gaagaccgcc gcaaccgcga tgacgaaggt caaggccgca
     7201 acgccaaagg caaaggtgca aaaggcgggc gtgaccgcaa caatgcccgc aacggcggcg
     7261 acgagcgcgt acgcggcggc aagaaaggca aaaaactcaa actcgagccg aaccaacacg
     7321 ccttccaagc accgaccgaa cccgtcgtac acgaggtttt ggttcccgaa accattaccg
     7381 ttgccgattt ggcgcacaaa atggcggtca aaggcgtgga agtggtcaaa gccctgatga
     7441 agatgggcat gatggttacc atcaaccaat ccatcgacca agacaccgcc ctgattgtcg
     7501 tcgaagaact cggacacatc ggcaaacccg ccgccgccga cgatcccgaa gccttcttgg
     7561 gcgagggcgc ggaagcggtg gaagccgaag cattgccgcg tccgcccgtc gttaccgtca
     7621 tgggccacgt cgaccacggc aaaacctcgc tgctggacta catccgccgc gccaaagtgg
     7681 tacagggcga agcgggcggc attacgcagc acatcggcgc gtaccacgtc aaaaccccgc
     7741 gcggcgtgat taccttcttg gacaccccgg gccacgaagc ctttaccgct atgcgcgcgc
     7801 gcggcgcgaa agcaaccgat atcgtgattc ttgtggtcgc cgccgacgac ggcgtgatgc
     7861 cgcaaaccat cgaggcaatt gcccacgcta aagcggcagg cgttccgatt gtggttgccg
     7921 tcaataaaat cgataaagac actgccaacc ccgaacgcat ccgtcaggaa ctgacccaac
     7981 acgaagtcat ccccgacgat tggggcggca cggttcaatt catcgacgtt tccgcgaaaa
     8041 aaggaacgaa catcgacgcg ctgctcgaag ccgtattgct cgaagccgaa gtattggaac
     8101 tgaccgcacc tgtcgatgcg cccgccaaag gcatcatcgt cgaggcgcgt ttggacaaag
     8161 gacgcggcgc ggttgccaca ttgctggttc aaaacggtac gctgaaaaaa ggcgacatgc
     8221 tgctggccgg tacggcattc ggcaaaatcc gcgcgatggt cgatgaaaac ggcaaatcca
     8281 ttaccgaagc cggcccgtcc atccccgtcg aaatcctcgg cttgtccgac gtaccgaatg
     8341 cgggtgaaga cgcgatggta ttggcggacg agaaaaaagc gcgcgaaatc gccctcttcc
     8401 gccaaggcaa ataccgcgac gtgcgccttg ccaaacagca ggcggcgaag ctggaaaata
     8461 tgttcaacaa tatgggcgaa acccaggccc aatctttgtc ggtcatcatc aaggcagacg
     8521 ttcagggctc ttacgaggct ttggcgggca gcctgaaaaa actgtccgcc gacgaggtga
     8581 aagtgaacgt gttgcacagc ggcgtgggcg gcattaccga atcggatgtc aaccttgcca
     8641 tcgcttcggg cgcgttcatt atcggcttta acgtgcgtgc agatgcctct tcgcgcaaac
     8701 ttgccgaaaa tgaaaacgtg gaaatccgct actacaacat catctacgat gccatcgacg
     8761 acgtgaaggc ggcgatgagc ggcatgcttt ctcccgaaaa gaaagaacag gttaccggta
     8821 cggtcgaaat ccgtcaggtc atctccgttt ccaaggtcgg caacattgca ggctgtatgg
     8881 tcaccgacgg cgtggtcaaa cgcgattccc atatccgcct catccgcaac aacgtggtca
     8941 tccacacggg cgaactggct tcgttgaaac gctataaaga cgacgtaaaa gaagtccgca
     9001 tgggcttcga gtgcggtctg atgctcaaag gctacaacga aatcatggaa ggcgaccaac
     9061 tggaatgctt cgacatcgtc gaagttgccc gcaccctgta attcctttgc aaataaaatg
     9121 ccgtctgaag cgttcagacg gcaacgaaac gggttctgta tcatacagaa cccgtttttt
     9181 gtcgcaaatc ggcttcagcg accctcctgc cttatcccga tttgaatctg acttgccata
     9241 caaacaggct tcagacggca ttatttgccc gccaaacgta tcccgatctt ctccgcatat
     9301 tccctgcgtt cggcgcggct ggtttccggg cggtgcgtat tgagcgacga ccatttccaa
     9361 tgactgcggg ctttgttgag ttcgggcggg agtttggcgg catcccacgg ggctttgcgg
     9421 ctgtgcagct cgatatccga ctgtgccgcg tgtccgcgcg tttgcaggac gtggagcaga
     9481 tcgagggcgc gggcggcgag cagggtcagg gtttcagggt cggtgtgcag ggtttgacgg
     9541 ccggcgagtt tgtcggaaat ggtgcgggta ttgggcagga tgccgcccaa aaagccgccg
     9601 attgccgtac ccaatccgag cgagccgccg agtgtggcga tgtccagccc caagccgatg
     9661 agcgcgccgg ttgccgcgcc cgtgccggtg cggatgccgt attgtttgag caattcgctg
     9721 tcgaacgggt cttggcggaa ggcttgcggc atccagtcgc cgccgtcgat ttcgctgtgg
     9781 tagaaacggt aaagggcaaa cagccgctgc tgcatctgcc gttcgagttg gcgtatttcc
     9841 gcctgcatgg tttgcagcac ggtggcggta tcctcgtttt cgtccacttc ctgcctgaag
     9901 gcggcggcat cgagcaggaa atcggcgatt tcgcggcgcg cttcgccgtc cagccgctgc
     9961 cattcgcgcc ggcgcatggc tgtcaggcgg tcaagtgtgc tgcgttcggg caacatggtg
    10021 gcgaggtttt cccacaggcg caattcgcct tcaaaatcaa aggcgacggt gtcgaaccct
    10081 gcgaaaacgt gcaggtttct cctcgccagc atggttgtcc acgattcggg aagctgtccg
    10141 ccggtaaagt tgaacacggg cataaccggt ttggcacacc atgaaaggat ggtcaattca
    10201 tcccgatatt tgtcgaggac gggttcgcgc gcgtcgatga cgtacattgc catatcgctt
    10261 tgcaaaacct gccgcagcac tttggcttct tggttgaaat cgtgatgcgc gccgtggctg
    10321 ccgagaaact gttgcagccg ctcgatgccg tctgaacgat tgtccgtatg gttttccagc
    10381 cattccaaaa caccgcccgc gtcttcgagt ccgggcgtgt catacaggaa aaccaacatg
    10441 tccgcgccgt cgctgatggc ggcttcttcg acatggcgtg tggtggacgg tgcgtttctg
    10501 acttcgccga agccgctgtc gcgcaacagg gtgcgcagga gcgaggtttt gccggtgttg
    10561 gtgtgtccca cgacggcgag ggaaaggggt tgtttgttca tgatgttttt gaagaatgga
    10621 ttttcagacg gtcttttttc agaatggcgg cttaacagaa catttcaagt gagtttattg
    10681 gtctttcaaa cggccttcct gcgccaccct gtcaggctca agccacgccg cgccgcattc
    10741 ggtcagcgcg ttacgccaat gttccagctt ttccgaaagg tcgtctgaaa gcccctgttc
    10801 cgccaaaagc tgcaccaccg cgccgccctg cgccgcttcc gaaagccgca caatctgccg
    10861 cagcacgccc cggtccggca cagtttgggc gcgtacgccg ataagcagtt gcgccggttt
    10921 ctgcttcagc tctgtctcca gcgcggcaac ctgttcccga ttggcggcaa cgcccttatc
    10981 cagccattcc tgcgccagcc tgccctcgaa ccattggccg tcctgccact cggtctccag
    11041 catgagcgcc catttcggcg catcgttcaa gacgattttc ggcgaaacgg cggacacggt
    11101 ttcccgacgc gtatccgcat cggtgatttt gttctgccag cggcggatga ccgcctgata
    11161 ataggttttt tccaaatcca atccgttttc gcttgttttc aaaaggattt tacacactac
    11221 ccaagccaag aggcgcggca ggatgccgta gcagacgata ctgccgacca gcagccccga
    11281 ccaagcccgc gcatcggcaa tattgccgtt cagacgacct tcgatgaccg cccgcgcatc
    11341 ggggacaggg aaaccgagtt tcgacggcag ccatgccaac atttccaccg cgcgtaccga
    11401 agcggcattg ctcaacagcg tgctttccca gttgaacgta tattgccgca ccaaaagcag
    11461 cagcaatacc gacaccagca ttccgagcag cgtgcagagc cacaagctgt gcgccgttgc
    11521 gcctattttc catcgtaccg aaggttgccg ccactggtcc gcatacagcc gcaacaccgc
    11581 ctgatttaca gggcctttgc cccgaaacca cgtcgccgga ctgctgaaaa accgccccac
    11641 tttcacgcgc aggaacaacg ttgccaacca tactgccagc atcagcgtat tcatgcccaa
    11701 cactcccgcc aaaactaaaa agaaattcag cccctgattg tccatcagaa gataagtgcc
    11761 tgaaaatccg gcggtaaaca tcatcgatgc cgccaccacc cataaccaga acgaccccgc
    11821 acgcacacgt tccaacgtgt cccgcagcat acggtccctg tcgatcatct ccgcccgacg
    11881 gatgattttt tcctccgtac tgccgtccac gcggcgcaaa gcctccgtcg cctgcacggg
    11941 atcgccgctg aaaataaaac cgccttcatc caaaatacgg accagctcaa ccagttttcg
    12001 ggatggattc aacataaaat gccgtctgaa aataaaaaac aaattttaac acacgcattt
    12061 tcaagaatat tcacagtgta ggcaaagagt aaatcccaca cagaggcaaa agtatcggcg
    12121 taaactgact gcctctactt tcccgaaaga ttgtgcgatg tatgcaggcg aacgcttcaa
    12181 tacttacagc catttgagcg gtttgattct ggcggcggca ggtttgatgc tgatgctgct
    12241 gaaaaccata ggacacgggg acggctaccg tatcttcagc gtatcggttt acggcatcag
    12301 ccttcttctg ctctatttga gttcctcgct gtaccacgga attgcagccg gaaaactgaa
    12361 aagcattttg aaaaaaaccg accactgcat gatttatgtg ctgattgccg gaagctacac
    12421 accgtttgca ctggtttctt tgagaaacgg gccgggctgg acggtatttt cactgtcctg
    12481 gctgctggcg gctgcaggaa tcgcacaaga actcaccatc ggacggaaaa gcgaaaaacg
    12541 tctgctgtct attgcgattt atatcgtaat gggctggatg gtcttggcgg taatgaaatc
    12601 cctgacagcc tcactcccgc cggcaggact ggcttggctg gcggcaggcg gtatgctgta
    12661 cagcgtcggc atttactggt ttgtaaacga tgaaaaaatc cgacacgggc acggaatctg
    12721 gcatctgttc gtattgggcg gcagcataac ccaatttgtc agcgtgtacg gttatgtaat
    12781 ctgaatgccg tctgaaacac aaaaacctcc caaacctgaa ggcagggagg ttttctcttt
    12841 gccgggcatt attgtttatc gtggaactcg tggaattcat actgatagga taaatcctgt
    12901 cccgcctttt tccgcatcag gtagtcatca taaatggcgc ggatttcctt acgcagcaag
    12961 aataaggcaa tcaggttggg gataaccata aagccgttga acatatcgga cagattccaa
    13021 accaaatcga ctttgccgag cgtacccaaa acgatagcaa gcagaaccaa tgcgcgatag
    13081 atgcccaagt gtcttcccct gaaaagaaaa cggatgttgg actcgccgaa ataataccag
    13141 ccgataatgg tcgtaaaggc gaagaaggtc agacacacgg caagcaattg cgaaccgaag
    13201 cccggaaatg ccttgttaaa ggcaaattga gtaaccgccg cgccctgttc gcccgaaagg
    13261 ttggcatcgg tcagcaggat aatcaatgcc gtagccgtac ataccaaaat cgtatcgata
    13321 aatacaccga caaatgccgt cataccttgc tgaacaggat gcttcacatc cgcagtcgcg
    13381 tgggcgtgcg gagtcgaacc catacctgct tcgttggaaa acagaccgcg cgccacgccg
    13441 aaacgtatcg cttcacgcat accgataccc gcagcaccgc ccaaaacggc ctcgggattg
    13501 aaggcggcgg taaagatgtg gttgaacatc ggcacaatat ggtcggaaaa ttcaaacagg
    13561 ataacgacgg cgcacaaaat ataaacaacc gccataaacg gcacgacaaa ccgggcaata
    13621 ttggcaatac ggttcacgcc gccaatcaca accatgcccg caaggacggc aaacacaata
    13681 ccgactgcca aagaaggcac atcaaatgca atggtaacgg cagaagcgat ggaatttgcc
    13741 tgagtcgcat tgccgataaa gcccaacgcg acaatcagcg cgatggagaa aaagcccgac
    13801 aggaaacgcg ccgcgcccct gccgattttc ggagtcagac cgtgcgtaat ataaaacgcc
    13861 ggcccgccga tgtatttgcc gtggctgacg acgcggtatt tctgcgccag cagtgcttcc
    13921 gcaaaaatcg tggacatccc caaaacggca gaaagccaca tccaaaaaat cgcacccggc
    13981 ccgcctgcgg taatggcggt cgccacaccg gcgacgttgc ccgtaccgat ttgcgcggat
    14041 atagcaaccg ccaacgcctg aaactgcgat aaggacttat cgtctttatc acctttggca
    14101 aacaagccgc cgaatacgga tttgaatccc gcgcccagct tggtaatctg cggcgcacca
    14161 agatacagcg taaaaaacag gccgataccc aaaagcgcat aaatcagcag gtagccccaa
    14221 agaaaccgat tgactgtacc caccagaaca gacaatatat tttccataaa ataaacctta
    14281 tcttacgatt aaaatgactg ttttccaaaa gacattccaa taaggaaaca cggcgagcag
    14341 accgtatttg ccgcaacaga tgccttaaat tgtcaataat ccgagagaag ctgtgccagc
    14401 ataccgtaaa atatcgttaa ttaaaatatt tctttatttt taagcggaaa gcggaggaaa
    14461 tcg
//
LOCUS       DAWXHA010000056        14439 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.056, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000056 DAWXHA010000000
VERSION     DAWXHA010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14439)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14439)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14439
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.056"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..191
                     /locus_tag="AABD07_001263"
     CDS             <1..191
                     /locus_tag="AABD07_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355794.1"
                     /translation="QRQELLNYLAEYNNILKFNADGSRVEISTDVQLKHLLYGIDERY
                     YTTALGKEKRLANSVQPI"
     gene            258..1859
                     /locus_tag="AABD07_001264"
     CDS             258..1859
                     /locus_tag="AABD07_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HFB2355795.1"
                     /translation="MTEQHFTEQIKSLIDSLKTICANYGLGNDGNEFKIISQAFLYKF
                     LNDKYDFEVKKIRKEKPDEPIEFVNMDIDGKTAVLKPEHSIKYLSERQNGADFAKLFD
                     DTLTDIAACNADLFSVKTEGGAKIVLFERISQYITDEGRRDDFCRALISKLAGFSFEA
                     IFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYTPHAVARIMADILVPEEVRGQIRSVD
                     VYDPSAGSGTLLMNVAHVIGEDKCMIYTQDISQKSSNLLRLNLSLNNLVHSLNNVVQG
                     NTILSPAHKDASGCLKKFDFIVSNPPFKLDFSDFRDRLESDENHERFFAGIPKIKPTK
                     KEKMEIYQLFIQHILFSLKENGKAAIVLPTGFITAKSGIDKKIREYLVENKMLAGVVS
                     MPSNIFATTGTNVSILFIDKVNKDKVVLIDASGLGEKISINDNQKTVLSHEEEQKICH
                     TFTHKQAVEDFSVVVGYDEIKAKNHSLSAGQYFEVKIDYVDISADEFVQKIAGFSADL
                     DKLFAESAELEKEIKDRLAMLKFNS"
     gene            1870..2007
                     /locus_tag="AABD07_001265"
     CDS             1870..2007
                     /locus_tag="AABD07_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HFB2355796.1"
                     /translation="MKPVKLKMPSESLSDGILFGLENTYAVLSPKERIQKTKATGIHR
                     K"
     gene            complement(2170..3507)
                     /gene="ribB"
                     /locus_tag="AABD07_001266"
     CDS             complement(2170..3507)
                     /gene="ribB"
                     /locus_tag="AABD07_001266"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HFB2355797.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQNRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTGRPPGHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAVNFMIKHARGLVCLPMEGAMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPADIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPAAVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGDAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERVQQAESGVVILLHHTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLHVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(3720..3848)
                     /locus_tag="AABD07_001267"
                     /pseudo
     CDS             complement(3720..3848)
                     /locus_tag="AABD07_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
     gene            complement(4060..4347)
                     /locus_tag="AABD07_001268"
                     /pseudo
     CDS             complement(4060..4347)
                     /locus_tag="AABD07_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117427.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            4548..4994
                     /locus_tag="AABD07_001269"
     CDS             4548..4994
                     /locus_tag="AABD07_001269"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355798.1"
                     /translation="MNKTLYRVIFNRKRGAVVAVAETTKREGKSCADSGSGSVYVKSV
                     SFIPTHSKAFCFSALGFSLCLALGTVNIAFADGIITDKAAPKTQQATILQTGNGIPQV
                     NIQTPTSAGVSVNQYAQFDVGNRGAILNNSRSNTQTQLGGWIQGNP"
     gene            5016..5339
                     /locus_tag="AABD07_001270"
     CDS             5016..5339
                     /locus_tag="AABD07_001270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HFB2355799.1"
                     /translation="MVVNQINSSHPSQLNGYIEVGGRRAEVVIANPAGIAVNGGGFIN
                     ASRATLTTGQPQYQAGDFSGFKIRQGNAVIAGHGLDARDTDFTRILVCQQNHLDQYGR
                     TSRHS"
     gene            5305..8820
                     /locus_tag="AABD07_001271"
     CDS             5305..8820
                     /locus_tag="AABD07_001271"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HFB2355800.1"
                     /translation="MISTAEQAGIRNQGQLFASSGNVAIDANGRLVNSGTMAAANVQD
                     MNNTAEHKVNIRSQAFENSGTAVSQQGTQIHSQSIQNTGKLLSAGTEDLAVSGSLNNQ
                     NGEIATNQQLIIHDGQQSTVVIDNTNGTIQSGRDVAIQAKSLSNNGTLAADNKLDIAL
                     QDDFYVERKIVAGNELSLSTRGSLKNSHTLQAGKRIRIKANNLDNAVQGNIQSGGTTD
                     IGTQHNLTNRGLIDGQQTKIQAGQMNNIGTGRIYGDNIAIAATRLDNQDENGTGAAIA
                     ARENLNLGIEQLNNRENSLIYSGNDMAVGGALDTNDQATGKAQRIHNAGAIIEAAGKM
                     RLGVEKLHNTNEHLKTQLVETGRERIVDYEAFGRHELLREGTQHELGWFVYNNESDHL
                     RTPDGVAHENWHKYDYEKVTQETQVTGTAPAKIIAGSDLIIDSKAVFNSDSRIIAGGN
                     LLVQTEKDGLHNEQTFGEKKVFSENGKLHNYWRARRKGHDETGHREQNYTLPEEITRD
                     ISLGSFAYESHSKALSRHAPSQGTELPQSNRDNIRTAKSNGISLPYTPNSFTPLPGSS
                     LYIINPANKGYLVETDPRFANYRQWLGSDYMLGSLKLDPNNLHKRLGDGYYEQRLINE
                     QIAELTGHRRLDGYQNDEEQFKALMDNGATAARSMNLSVGIALSAEQAAQLTSDIVWL
                     VQKEVKLPDGGTQTVLMPQVYVRVKNGDIDGKGALLSGSNTQINVSGSLKNSGTIAGR
                     NALIINTDTLDNIGGRIHAQKSAVTATQDINNIGGILSAEQTLLLNAGNNINNQSTAK
                     SSQNAQGSSTYLDRMAGIYITGKEKGVLAAQAGKDINIIAGQISNQSDQGQTRLQAGR
                     DINLDTVQTGKYQEIHFDADNHTIRGSTNEVGSSIQTKGDVTLLSGNNLNAKAAEVGS
                     AKGTLAVYAKNDITISSGIHAGQVDDASKHTGRSGGGNKLVITDKAQSHHETAQSSTF
                     EGKQVVLQAGNDANILGSNVISDNGTRIQAGNHVRIGTTQTQSQSETYHQTQKSGLMS
                     AGIGFTIGSKTNTQENQSQSNEHTGSTVGSLKGDTTIVASKHYEQTGSNVSSPEGNNL
                     ISTQSMDIGAAQNQLNSKTTQTYEQKGLTVAFSSPVTDLAQQAIAVAHKAANKSDKAK
                     TTALMPWRLPMQVGRPIKQAKAHKT"
     gene            8780..9913
                     /locus_tag="AABD07_001272"
     CDS             8780..9913
                     /locus_tag="AABD07_001272"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HFB2355801.1"
                     /translation="MAGLSNRQRRTKLSQWYNQCQTSQHLHNLRRTAKPTNHPSSSQS
                     SPSESNSSRRQNYPYCRRCGEQSNINITGSGVSGRAGTGLIADKQIHLQSAEQSNTER
                     SQNKSAGWNAGAAVSFGQGGWSLGVAAGGNVGKGYGNGDSVTHRHSHIGDKGSQTLIQ
                     SGGDTIIKGAQVRGKGVQVNAKNLSIQSVQDRETYQSKQQNAGAQVTVGYGFSASGDY
                     SQSKIRADHASVTEQSGIYAGEDGYQIKVGNHTGLKGGIITSSQSAKDKGKNRFSTGT
                     LAGSDIQNYSQYEGKSFGLGASVAVSGKTLGQGAKNKPQDKHLTSIADKNGASSSVGY
                     GSDSDSQSSITKSGINTQKHSNHRRSRTNQADRQNSGTNQSRY"
     gene            9984..10430
                     /locus_tag="AABD07_001273"
     CDS             9984..10430
                     /locus_tag="AABD07_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HFB2355802.1"
                     /translation="MQSELDLQRTVSQDFSKNVQQTNTEINQHLDKLKADKEAAETAA
                     AEALANGDMETAKRKAHEAQDAAAKADNWQQGKVILNMLASGLAEPTQSGAGIAAATA
                     SPDVSYAIGQHFKDLAGQNANGKLTASQETAHVLAHAVLGAAVAAA"
     gene            10455..10688
                     /locus_tag="AABD07_001274"
     CDS             10455..10688
                     /locus_tag="AABD07_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HFB2355803.1"
                     /translation="MGAGGSEAAAPIIGKWLYGKGDGGSLNAEEKETVSAITRMLGTA
                     AGAAEGNSSADAVWGCFQTASDFASSFSYPINM"
     gene            10726..11523
                     /locus_tag="AABD07_001275"
     CDS             10726..11523
                     /locus_tag="AABD07_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HFB2355804.1"
                     /translation="MFLCIAIIARLHYLDQSYETFLFLQKCISSLSLITVSPIIDGCL
                     PTLTSAAPTPEAVSQQQDILQRQREKQLREQMQPEQDVRLDGTDTGIEKMATQVGGAN
                     SDEASPCFPISEVELVGEEAAKFRFALNHALCQTHFVSGKCLHAGDINQIMSLAQNAL
                     IGRGYTTTRILAAPQDLNSGKLQLTLMPGYLRSIRIDRSNDDQTHAGRIAAFQNKFPT
                     RSNDLLNLRDLEQGLENLKCLPTAEADLQIVPVEREPNQSDVVVQWR"
     gene            11554..12582
                     /locus_tag="AABD07_001276"
     CDS             11554..12582
                     /locus_tag="AABD07_001276"
                     /inference="COORDINATES: protein motif:HMM:NF015803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HFB2355805.1"
                     /translation="MDNSGSEATGKYQGNITFSADNPFGLSDMFYVNYGRSIGGTPDE
                     ENFDGHRKEGGSNNYAVHYSAPFGKWTWAFNHNGYRYHQAVFGLSEVYDYNGKSYNTD
                     FGFNRLLYRDAKRKTYLSVKLWTRETKSYIDDAELTVQRRKTTGWLAELSHKGYIGRS
                     TADFKLKYKHGTGMKDALRAPEEAFGEGTSRMKIWTASADVNTPFQIGKQLFAYDTSV
                     HAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLPAERGWYWRNDLSWQFKPGHQLYLGA
                     DVGHVSGQSAKWLSGQTLAGTAIGIRGQIKLGGNLHYDIFTGRALKKPEYFQTKKWVT
                     GFQVGYSF"
     gene            12600..12968
                     /locus_tag="AABD07_001277"
     CDS             12600..12968
                     /locus_tag="AABD07_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355806.1"
                     /translation="MYDKMHKSCRFFAGSFCFMFGAVPDNRVKFPLAHYFKIEILYFI
                     SLLLKRCSHFFIGFIIHHLIYGFWRQGLTAFAAVIDFWDRGNAFKESKAIRPDADGGA
                     IIHLLEFVAIGADSCDDYVE"
     gene            complement(13344..14384)
                     /gene="mutY"
                     /locus_tag="AABD07_001278"
     CDS             complement(13344..14384)
                     /gene="mutY"
                     /locus_tag="AABD07_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HFB2355807.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VAAVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYGRARNLHKAAQQIVGQFGG
                     TFPSERKDLETLCGVGRSTAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKF
                     ENSLWTLAESLMPSENADMPTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQNRT
                     AELPRKKTALEVQTLPLYWLIVRNRDGAILLEKRTAKGIWGGLYCVPCFESLNGLSDF
                     AAKLSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSEHHSDGIWIKPGHLKDYGLPK
                     PLEIYLNGNRLE"
BASE COUNT         4145 a         3312 c         3537 g         3445 t
ORIGIN      
        1 atcaaagaca agaactatta aattaccttg ctgaatataa taatatcttg aaatttaacg
       61 cagatggctc tcgtgtagaa atttctactg atgtacagct gaaacatttg ttatatggta
      121 ttgatgaacg ttattacaca acagcattag gaaaagagaa aaggttggca aatagtgttc
      181 aacctattta atctgccagc aaaccaacta atgctaaaca aaatttaagc gacgctagca
      241 acaaaccgag acattccatg accgaacaac actttaccga acaaatcaaa tccctaatcg
      301 acagcttaaa aaccatctgc gccaactatg gtttgggcaa tgacggcaac gaatttaaaa
      361 tcatcagtca ggcgtttttg tataaattcc taaacgacaa atacgatttt gaagttaaaa
      421 aaattcgcaa agaaaagccc gacgagccga tcgagttcgt caatatggat attgatggaa
      481 aaacagcggt tttaaagccc gaacattcca tcaagtattt atcagagcgg caaaacggcg
      541 cggattttgc caaactcttt gacgatacgc tcaccgatat tgccgcctgt aatgcggatt
      601 tgttttcggt gaaaaccgaa ggcggggcga aaatcgtgtt gttcgagcgt atcagtcagt
      661 acattaccga cgaaggccga cgcgacgatt tttgccgcgc gctgatttcc aagctggcgg
      721 gtttcagctt cgaggcgatt tttgcgcaaa aattcgactt tttcgccacg atttttgaat
      781 acctgattaa agactacaac agtaattccg gcggcaaata tgccgaatac tacacgccgc
      841 acgcggttgc gcggattatg gcggatattt tggtgccgga ggaggtgcgc gggcaaatcc
      901 gcagcgtgga cgtttacgac ccgtcggccg gttcgggaac gctgttgatg aatgtcgccc
      961 atgtcatcgg cgaagataaa tgcatgattt atactcagga tatttcgcag aaatcgtcca
     1021 atttgttgcg gctgaatctg agtttgaaca atctggtgca ttcgctgaat aatgtggttc
     1081 agggcaatac gattttgtcg cccgcccaca aagacgcttc aggctgtctg aaaaaatttg
     1141 atttcattgt ttccaatccg ccgtttaaat tggatttcag cgatttccgc gatcggctgg
     1201 aaagcgatga aaaccacgaa cgcttttttg ctggtatccc gaaaatcaag ccaacaaaga
     1261 aagagaagat ggaaatctat cagcttttta tccagcatat tctgttcagc ctgaaagaaa
     1321 acggcaaggc agcgattgta ttaccgaccg gctttatcac ggcaaaatcg ggcatcgata
     1381 aaaaaattcg cgaatatctg gtggaaaaca aaatgctcgc cggcgtggtg tctatgcctt
     1441 ccaatatttt cgctacgacg ggaaccaatg tttctatctt gtttattgat aaagtcaata
     1501 aggataaagt tgtattaatc gatgcttccg gtttaggtga aaaaattagt attaatgaca
     1561 accaaaaaac tgtactttcc cacgaagaag aacaaaaaat ctgccatacc ttcacgcaca
     1621 aacaggcagt agaagatttc agcgtggtgg tcggctatga tgaaatcaaa gcgaagaatc
     1681 acagcttgtc ggcggggcag tattttgagg taaaaattga ttatgtggat atatccgccg
     1741 acgaatttgt gcaaaaaata gcgggatttt cagcggattt ggataaactt ttcgccgaat
     1801 ctgccgaatt ggaaaaggag attaaggata gattggcgat gttgaaattc aattcataaa
     1861 taccgatgaa tgaaaccggt caaacttaaa atgccgtctg aaagcctttc agacggcatt
     1921 ttgtttggtt tggaaaatac ttatgccgtt ctttccccga aagagagaat ccaaaaaacc
     1981 aaagccacag gaattcatcg gaaatgacac aaaaacccga cgaaccggat tcccgcctgc
     2041 gcgggaatga cgaattagaa gttacccgaa atccgaaaaa agcaaaatcc aacccaacag
     2101 accgggtttt cgtttgtacg gaaataatgc aataaatgaa gcaaatataa agcatttgaa
     2161 tttactatat tatttttccg cttcttcaaa gccgacgact tcgaggccga agccggtgag
     2221 gccggtgaaa gatgacggtt ggccgaggac gcgcagtttt ttgacgtgga ggccggcgag
     2281 gatttgcgcg ccgatgccgt agcttttgct gtcccatttg taggcttggt ttgcgccttt
     2341 gggtagggtg cggtcgagca gggatgcgcc gtcttcggtg tggtgcagga ggatgacgac
     2401 gccgctttcg gcctgttgga cgcgctcaag ggctttgggc agcgaccagg aatggcgcgg
     2461 attggcttgg atgaagtcca tcacgctgaa gggttcgtgg acgcggacga gggtttcggt
     2521 gtcggcggag ggtgtgcctt tgacgagggc gaggtgggtt tcgccggaga gtttgtcgac
     2581 gtaaacgtgt tgttggaact cgccccacgg agtttgtacg ggcgcgtcgc ccatatcttc
     2641 gagcaggctt tcggtgcggc tgcggtattc gatgaggtcg gcaatcgtgc cgattttgag
     2701 cttgtgttct tcggcgaatt tcatcagttc gggcatacgc gccatcgtgc cgtcgtcgtt
     2761 gatgatttcg cagatgacgg cggcgggaat cagcccgttc atttgcgcca agtcgacgcc
     2821 ggcttcggtg tgtccggcac ggacgagtac gccgcctttt tgggcgcgaa gcgggaagat
     2881 atgaccgggt tggacgatgt ctgcgggttt ggcggtcggg gaaacggcgg tttgaatagt
     2941 cagggcgcgg tcggcggcgg aaatgccggt ggtaatgccg tgcgcggctt cgatggaaac
     3001 ggtaaagttg gtaccgtatt gcgcgccgtt tttttgggtc atcatcggca gaccgagttt
     3061 ttcgaccatt gcaccttcca taggcaggca gactaagccg cgcgcgtgtt tgatcataaa
     3121 gttgacggct tcgggggtaa cgaattgcgc tgccatcagc aggtcgcctt cgttttcgcg
     3181 gtcttcggca tcggtgatga tgaccatttt accggctttg atgtcggcta ggatttcggg
     3241 gatgggggaa atatgggaca tggtgtgttt tcctgtgtgt ccgggcggtc ggccggtgtg
     3301 ttcggtatcg agccagaagg cgggcatttt tgccgcctgt tcgattttgc gggctttttt
     3361 ctcgccgaag gatttgtttt tcaaaagggc ggagagttcg cctgtgttga gggcaacggc
     3421 ttcggcaaaa cggttttgca gtccgccgta gtgttccgct atccattgcc gcaggttgcg
     3481 gcggcgcaag ccggctgtgt cggtcatcgt tttatccttt gtagaaatcg gatgtagcgg
     3541 attgtaagcg cgtatttact aaaaagcaaa tttgtttttc gccaaatcgg attatttgcc
     3601 ttttggtaaa cagatgccgt ttgaagccgg attcgtggct tcagacggca ttgccgcaac
     3661 cccgccggcg gggcggctgt ttcttcccgc acgcttctga ttatggggtt tccggagggt
     3721 tattccgaaa aaaaattctg ataaaaagcc ttgattgccg ggtacggcat aggcggtacg
     3781 agcaggcgca ataccggcaa tcctatgatg aatgccgcct tcccgataaa aaccggacgg
     3841 attgcccttt actttctaca agtaacaggg cttttttttg cccgtttttg aggattcgta
     3901 ccatggaaga taaggaaggg atgaaaaagg cggttgccgg cgtgatgacg gaggcgccgg
     3961 cggacggcag gaagccggca accgcttcga atcttccccc cccttatcta acaggggggt
     4021 acggaaaccg aaacggcggg cagggttcag gaagtcttcg aatgttacga aacgtacata
     4081 acggacggca aaggaaacct taccatttcg tttgagaagc ctgaatactg cgacttttcc
     4141 ggcagcaccg cgaccgcgtt tacctttgcg ttgtccgcca aaataacttt catctgcttc
     4201 tacttcgcca tcaaacattt ctaaatgcgg accgttttga taaatcagtc atcgtaaacg
     4261 atgaaaatca taggctgcgg tatttttatt aacgcctacc aactctgccg ctgttcttgc
     4321 agttacgcct gcgacaaata gcccaatgag tttattttgt ttataccggc ttagacggct
     4381 tttctcattg gcttattcta acctaaatgg gatttttagc cgttatccgg tacgtcccct
     4441 aatttaataa aaaaatggcg gtaattgact taccaaaatc tttgtcctag aatgcccaga
     4501 ctgtccaatg tttgtaataa ctctataaaa atcaaataac taaaatcatg aacaaaaccc
     4561 tctatcgtgt gattttcaac cgcaaacgcg gtgctgtggt agctgttgcc gaaaccacca
     4621 agcgcgaagg taaaagctgt gccgatagtg gttcgggcag cgtttatgtg aaatccgttt
     4681 ctttcattcc tactcattcc aaagcctttt gtttttctgc attaggcttt tctttatgtt
     4741 tggctttggg tacggtcaat attgcttttg ctgacggcat tattactgat aaagctgctc
     4801 ctaaaaccca acaagccacg attctgcaaa caggtaacgg cataccgcaa gtcaatattc
     4861 aaacccctac ttcggcaggg gtttctgtta atcaatatgc ccagtttgat gtgggtaatc
     4921 gcggggcgat tttaaacaac agtcgcagca acacccaaac acagctaggc ggttggattc
     4981 aaggcaatcc ttgattgaca aggggcgaag cacgtgtggt tgtaaaccaa atcaacagca
     5041 gccatccttc acaactgaat ggctatattg aagtgggtgg acgacgtgca gaagtcgtta
     5101 ttgccaatcc ggcagggatt gcagtcaatg gtggtggttt tatcaatgct tcccgtgcca
     5161 ctttgacgac aggccaaccg caatatcaag caggagactt tagcggcttt aagataaggc
     5221 aaggcaatgc tgtaatcgcc ggacacggtt tggatgcccg tgataccgat ttcacacgta
     5281 ttcttgtatg ccaacaaaat caccttgatc agtacggccg aacaagcagg cattcgtaat
     5341 caagggcagt tgtttgcttc ttccggtaat gtggcgattg atgcaaatgg ccgtttggtc
     5401 aatagtggca cgatggctgc cgccaatgtg caagatatga ataatacagc ggaacacaaa
     5461 gtcaatatcc gcagtcaagc ctttgaaaac agcggtacgg cggtatcgca acaaggcact
     5521 caaattcaca gtcaatcgat tcaaaacact ggcaaattat tgtcggcagg aacagaggat
     5581 ttagccgttt caggcagcct gaacaatcaa aatggcgaaa tagcgaccaa tcaacaactg
     5641 attattcacg atggtcagca atctaccgtt gtcattgata atacgaatgg cacgatacaa
     5701 tcaggccgtg atgttgccat tcaggcaaaa tcgttatcca acaacggcac acttgccgct
     5761 gataataaac tggatattgc gttacaagat gatttttatg tagaacgcaa gatcgtggcg
     5821 ggcaatgaat tgtcgctcag tacacgaggc agcctgaaaa attcacatac cttgcaagca
     5881 ggaaaacgca ttcggattaa agcaaataac cttgataatg cagtacaagg caacattcaa
     5941 tccggcggta cgacagacat tggcacgcag cacaatttaa ccaatagagg cttgattgac
     6001 ggacaacaaa ccaaaatcca agccgggcaa atgaataata tcggtacagg tcggatttat
     6061 ggcgacaata tcgctattgc ggctacccgc ttagacaatc aagatgaaaa cggtacaggt
     6121 gccgccattg cggcacgcga aaacctgaat ttaggcattg aacaattaaa taaccgtgaa
     6181 aacagtctga tttacagcgg taacgatatg gcggttggcg gcgcattaga taccaatgac
     6241 caagccacag gcaaagccca aaggatacac aatgccggcg caatcattga agctgcaggc
     6301 aaaatgcgtt taggtgtaga aaagctgcac aataccaatg aacatttgaa aacgcagttg
     6361 gtagaaacag ggcgcgagcg tattgttgat tacgaagcat ttggacgaca cgaattattg
     6421 cgagaaggca cgcaacatga attaggctgg tttgtctaca acaatgaatc agaccactta
     6481 cgcacccctg atggagtggc gcatgaaaat tggcataaat acgattatga aaaagtaacg
     6541 caagaaactc aagtaaccgg aactgcgcct gctaaaatca ttgcaggtag cgatttgatt
     6601 attgatagca aagcagtctt caacagcgac agccgaatca tcgccggcgg caatttgctt
     6661 gtgcaaacag aaaaagacgg tttgcataac gagcaaacct ttggcgagaa gaaagtcttc
     6721 agcgaaaatg gtaagttgca caactactgg cgtgcgcgtc gtaaaggaca tgatgaaaca
     6781 gggcatcgtg aacaaaatta tactttgccg gaggaaatca cacgcgacat ttcactgggt
     6841 tcatttgcct atgaatcgca tagcaaagca ttaagccgtc atgcgcccag ccaaggcact
     6901 gagttgccac aaagtaaccg ggataatatc cgtactgcga aaagcaacgg tatttcgcta
     6961 ccctatacgc ccaattcttt taccccatta cccggcagca gcttatacat tatcaatcct
     7021 gccaataaag gctatcttgt tgaaaccgat ccacgctttg ccaactaccg tcaatggttg
     7081 ggtagtgact atatgctggg cagcctcaaa ctagacccaa acaatttaca taaacgtttg
     7141 ggtgatggtt attacgagca acgtttaatc aatgaacaaa tcgcagagct gacagggcat
     7201 cgtcgtttag acggttatca aaacgacgaa gaacaattta aagccttaat ggataatggc
     7261 gcgactgcgg cacgttcgat gaatctcagc gttggcattg cattaagtgc cgagcaagca
     7321 gcgcaactga ccagcgatat tgtttggttg gtacaaaaag aagttaaact tcctgatggc
     7381 ggcacacaaa ccgtattgat gccacaggtt tatgtacgcg ttaaaaatgg cgacatagac
     7441 ggtaaaggtg cattgttgtc aggcagcaat acacaaatca atgtttcagg cagcctgaaa
     7501 aactcaggca cgattgcagg gcgcaatgcg cttattatca ataccgatac gctagacaat
     7561 atcggtgggc gtattcatgc gcaaaaatca gcggttacgg ccacacaaga catcaataat
     7621 attggcggca ttctttctgc cgaacagaca ttattgctca atgcgggtaa caacatcaac
     7681 aaccaaagca cggccaagag cagtcaaaat gcacaaggta gcagcaccta cctagaccga
     7741 atggcaggta tttatatcac aggcaaagaa aaaggtgttt tagcagcgca ggcaggcaaa
     7801 gacatcaaca tcattgccgg tcaaatcagc aatcaatcag atcaagggca aacccggctg
     7861 caggcaggac gcgacattaa cctggatacg gtacaaaccg gcaaatatca agaaatccat
     7921 tttgatgccg ataaccatac catccgaggt tcaacgaacg aagtcggcag cagcattcaa
     7981 acaaaaggcg atgttaccct attgtcaggg aataatctca atgccaaagc tgccgaagtc
     8041 ggcagcgcaa aaggcacact tgccgtgtat gctaaaaatg acattactat cagctcaggc
     8101 atccatgccg gccaagttga tgatgcgtcc aaacatacag gcagaagcgg cggcggtaat
     8161 aaattagtca ttaccgataa agcccaaagt catcacgaaa ctgctcaaag cagcaccttt
     8221 gaaggcaagc aagttgtatt gcaggcagga aacgatgcca acatccttgg cagtaatgtt
     8281 atttccgata atggcacccg gattcaagca ggcaatcatg ttcgcattgg tacaacccaa
     8341 actcaaagcc aaagcgaaac ctatcatcaa acccaaaaat caggattgat gagtgcaggt
     8401 atcggcttca ctattggcag caagacaaac acacaagaaa accaatccca aagcaacgaa
     8461 catacaggca gtaccgtagg cagcctgaaa ggcgatacca ccattgttgc aagcaaacac
     8521 tacgaacaaa ccggcagcaa cgtttccagc cctgagggca acaaccttat cagcacgcaa
     8581 agtatggata ttggcgcagc acaaaaccaa ttaaacagca aaaccaccca aacctacgaa
     8641 caaaaaggct taacggtggc attcagttcg cccgttaccg atttggcaca acaagcgatt
     8701 gccgtagcac acaaagcagc aaacaagtcg gacaaagcaa aaacgaccgc gttaatgcca
     8761 tggcggctgc caatgcaggt tggcaggcct atcaaacagg caaaggcgca caaaacttag
     8821 ccaatggtac aaccaatgcc aaacaagtca gcatctccat aacctacggc gaacagcaaa
     8881 accgacaaac cacccaagtt caagccaatc aagcccaagc gagtcaaatt caagcaggcg
     8941 gcaaaactac ccttattgcc gaaggtgcgg cgaacaatcc aatatcaaca tcacaggctc
     9001 aggtgtttca ggcagagcag gaaccggcct gattgccgat aagcaaatcc atctgcaatc
     9061 agccgagcaa agcaataccg aacgcagcca aaacaaatca gcaggctgga acgcaggtgc
     9121 tgccgtatca ttcggacaag gaggctggtc attaggcgtt gccgcaggcg gcaatgtcgg
     9181 caaaggctac ggcaatggcg atagcgtaac ccaccgccat agccatattg gcgacaaagg
     9241 cagccaaacc cttatccaaa gtggtggcga taccatcatc aaaggcgcgc aagtacgcgg
     9301 caaaggcgta caagtcaatg ccaaaaacct aagcattcaa agtgtacaag atagagaaac
     9361 ttatcaaagc aaacaacaaa acgccggtgc acaagttacc gtaggttatg gcttcagtgc
     9421 cagtggcgat tacagccaaa gcaaaatccg agccgaccat gcttcggtaa ccgagcaaag
     9481 cggtatttat gccggagaag acggctatca aatcaaggtc ggaaaccata caggcctcaa
     9541 aggcggcatc atcaccagca gccaaagcgc aaaagacaag ggtaaaaacc gattcagcac
     9601 aggcacactc gccggcagtg atattcaaaa ttacagccaa tacgaaggaa aaagttttgg
     9661 attgggtgcc agcgttgccg taagcggcaa aacactggga cagggcgcaa aaaataaacc
     9721 tcaagacaaa cacctgacaa gcatagccga taaaaacggc gcaagttcat cagtagggta
     9781 cggcagcgac agcgacagtc aaagcagcat cacaaaaagc ggcatcaata cccaaaaaca
     9841 ttcaaatcac agacgaagcc gcacaaatca ggctgacagg caaaatagcg gcacaaacca
     9901 aagccgatat tgatacaaac gtaaccacag acaccgccga acgacattcg ggcagcctga
     9961 aaaacatatt tgacaaagat agagtgcaaa gtgaactgga tttacaaaga accgtcagcc
    10021 aagattttag taaaaatgtt caacaaacca ataccgagat taaccaacat ttagacaaac
    10081 tcaaagcaga caaagaagca gccgaaacag cagcagccga ggcattagcc aatggcgata
    10141 tggaaactgc caaacgcaaa gcccatgaag ctcaagatgc ggcagcaaaa gcagataatt
    10201 ggcaacaagg caaagtcatt ctcaacatgt tagcctcagg tttagctgag ccgacccaaa
    10261 gcggagcggg catcgctgcg gctaccgcat cgccagacgt atcgtatgcg attggacagc
    10321 actttaaaga tttagccggt caaaacgcga atggcaaact aaccgccagt caagaaaccg
    10381 ctcacgttct tgcccacgcg gtattaggag cagcggttgc cgcagcatga ggcaacaatg
    10441 ccccggcagg agcattgggt gcgggcgggt cggaagcggc cgccccaatc atcggcaaat
    10501 ggctgtacgg caaaggagac ggcggcagcc tgaatgcgga ggaaaaagag accgtttcgg
    10561 cgattacaag gatgctgggt acggctgccg gagcagctga gggaaactcg tccgccgatg
    10621 ctgtgtgggg ttgttttcag acggcttcag atttcgcttc ctctttttca tatcctataa
    10681 acatgtgatt aaattttcat ttatggagtt tttttatctt tttgtttgtt tttgtgcatt
    10741 gctataattg cccgcttaca ttacttagac caatcctatg aaacctttct tttcctccaa
    10801 aaatgtattt catccctatc ccttatcact gttagtccta tcattgatgg ctgcctcccc
    10861 accctaacat cagccgcccc cacacctgaa gctgtttcac aacaacagga tattctccaa
    10921 cgtcaacgtg agaagcaatt gcgtgaacag atgcagccgg aacaagatgt tcgtttggat
    10981 ggtaccgata cgggcataga gaagatggca acacaggtag gcggtgcaaa ttcggatgag
    11041 gcaagcccct gctttcctat ttctgaggtg gaattggtgg gtgaagaagc ggctaaattc
    11101 cggtttgcgc tcaaccatgc cttgtgccaa acacattttg tttccggcaa gtgtctgcat
    11161 gcgggcgaca ttaatcaaat catgtcctta gcacaaaatg ctttgatcgg caggggatat
    11221 accacgaccc gtatcttggc tgcgccacag gatttgaata gtggcaagct tcaattaacc
    11281 ctgatgccgg gctatctgcg ctccatacga atcgatcggt ccaacgatga tcaaacccat
    11341 gcaggacgta ttgcagcatt ccaaaacaaa tttcccaccc gctcgaacga tctgttgaat
    11401 ctgcgtgatt tggaacaagg actggaaaat ctcaaatgtc tcccgactgc ggaagccgat
    11461 ctccaaatcg ttcccgtaga gagagaacca aaccaaagtg atgtcgtggt gcaatggcgg
    11521 taacgtctgc tgccctactg tgtgagtgtg gggatggata attcgggtag tgaggcgaca
    11581 ggaaaatacc aaggaaatat cactttctct gccgacaatc cttttggact gagtgatatg
    11641 ttctatgtaa attatggacg ttcaattggc ggtacgcccg atgaggaaaa ttttgacggc
    11701 catcgcaaag aaggcggatc aaacaattac gccgtacatt attcagcccc tttcggtaaa
    11761 tggacatggg cattcaatca caatggctac cgttaccatc aggcggtttt cggattatcg
    11821 gaagtctatg actataatgg aaaaagttac aacactgatt tcggcttcaa ccgcctgttg
    11881 tatcgtgatg ccaaacgcaa aacctatctc agtgtaaaac tgtggacgag ggaaacaaaa
    11941 agttacattg atgatgccga actgactgta caacggcgta aaaccacagg ttggttggca
    12001 gaactttccc acaaaggata tatcggtcgc agtacggcag attttaagtt gaaatataaa
    12061 cacggcaccg gcatgaaaga tgctctgcgc gcgcctgaag aagcctttgg cgaaggcacg
    12121 tcacgtatga aaatttggac ggcatcggct gatgtaaata ctccttttca aatcggtaaa
    12181 cagctatttg cctatgacac atccgttcat gcacaatgga acaaaacccc gctaacatcg
    12241 caagacaaac tggctatcgg cggacaccac accgtacgtg gcttcgacgg tgaaatgagt
    12301 ttgcctgccg agcggggatg gtattggcgc aacgatttga gctggcaatt taaaccaggc
    12361 catcagcttt atcttggggc tgatgtagga catgtttcag gacaatccgc caaatggtta
    12421 tcgggccaaa ctctagccgg cacagcaatt gggatacgcg ggcagataaa gcttggcggc
    12481 aacctgcatt acgatatatt taccggccgt gcattgaaaa agcccgaata ttttcagacg
    12541 aagaaatggg taacggggtt tcaggtgggt tattcgtttt gatgcggttg aagtgaataa
    12601 tgtatgacaa gatgcacaaa agctgccggt tttttgcagg cagcttttgt tttatgtttg
    12661 gggctgtacc ggacaaccgg gtcaaatttc cattagctca ttattttaaa attgaaattt
    12721 tatattttat ttcactgttg ttaaaacgct gttcacattt cttcatcggt tttatcattc
    12781 atcaccttat ttacggcttc tggagacagg ggcttaccgc atttgctgca gtaatcgatt
    12841 tttgggacag gggaaatgcc tttaaagaaa gtaaagctat ccgacccgat gccgacggag
    12901 gtgccataat tcatcttttg gaattcgtgg caataggggc agattcctgc gatgattatg
    12961 tagaataaaa ttatgatacc tccgaaactg aaatatatca caaatattat ttgcataatt
    13021 gttatttgca gaaaattaga acccgttatc acgtcttgga taaatgccaa aaccactgtg
    13081 attccgagaa ttaaaaagaa aaatttcgga atcctcatcc ttttctgaaa cctgattgcg
    13141 gtatccatgg ctttgtcttt gtcatttaag tttgtgttca tgtttttgac cctctttgtt
    13201 tctaaaatcc tttttaaatt gccgactttt tccgttccaa atgtcccatt tgaacattat
    13261 cccgctgcct aaaatacgac ccaaattcat cggttgttct tgctgcgata cctgctaaca
    13321 acagttcaac gggtttattt tgtttattct aacctattac cgtttaaata aatttccaaa
    13381 ggcttgggca ggccgtaatc tttcaaatgg cccggcttta tccaaatgcc gtctgaatgg
    13441 tgttcggacg gcatttgccc ttcaaacggc gtaatcatca gcagccggtg cgtcaggcgg
    13501 tgggtcaggg cggtttgttc gtccatatcc gccatcgtca gggagagttt ggcggcaaag
    13561 tcggaaagcc cgttcaaact ttcaaaacac ggcacgcaat acagtccgcc ccaaatgcct
    13621 ttggcggtgc gtttttccag caagattgcg ccgtcccggt tgcggacaat cagccagtaa
    13681 agcggcaggg tttgcacttc gagggcagtt tttttacgcg gcagctcggc ggtgcggttt
    13741 tgcttttttg cttcgcagat gtccgccata gggcattgac ggcacaaggg tttcgtccgt
    13801 ttgcacacgg tcgcgcccaa atccatcaaa ccttgcgtgt aagtaggcat atcggcgttt
    13861 tcagacggca tcaggctttc ggcaagtgtc cagagcgagt tttcaaattt tttatcttgc
    13921 ggattgccgt cttgggcaaa aacacggcag agaacgcgtt tgacgttgcc gtccaagatg
    13981 gtttctcgtc ggttgaaagc aaaggcagaa atggcggcgg cggtgcttct gcctacgccg
    14041 cagagcgttt ccaagtcttt gcgctccgat ggaaacgtac cgccgaattg tccgacgatt
    14101 tgttgcgcgg ctttgtgcag attgcgcgcg cggccgtaat agcccaagcc cgcccacaac
    14161 gacaacactt cgtcttgcgg cgcggcggca agcgtctgaa cggtcgggaa tttttccaag
    14221 aaacgcggat agtagtccaa cacggcggcg acctgcgttt gctggagcat gatttcggaa
    14281 agccagacgc aataagggtt tttgacctgc caagggaggt ggtggcgacc gtgttgtttt
    14341 tgccagcgga tgagccgttc ggagaagggg atgggtgtgt tcattaatat caatcggtgg
    14401 ttttatttat atttaaaaca gtatgttatt gtataaaat
//
LOCUS       DAWXHA010000057        14385 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.057, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000057 DAWXHA010000000
VERSION     DAWXHA010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14385
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.057"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(284..2755)
                     /locus_tag="AABD07_001279"
     CDS             complement(284..2755)
                     /locus_tag="AABD07_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFB2355808.1"
                     /translation="MKKTCFHCGLDVPENLHLTVRYEGEDRETCCVGCQAVAQSIIDS
                     GLGSYYKRRTADAKKTELPPQEILDQIRLYDLPEVQSDFVETHNGTHEAVLMLSGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQTGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRAGMDTPIAAAIIMTFIAGIYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHRMPGYPAVQDVRESAVVKLQ
                     AGDIVMVKPGETIPVDGTVLEGNSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLSQTTD
                     IIFDKTGTLTQGNPAVRRIELLGSMTEAQVLAVAQSLEQQSEHPLARAILNCRISGGS
                     VPEIQVGQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLQDPLKDSAAEAVRQLAGKNLTLHILSGDREEAVAETARALGIAHYRA
                     QAMPEDKLEYVEALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMPSEKILSEQ"
     gene            complement(2752..3930)
                     /gene="hflX"
                     /locus_tag="AABD07_001280"
     CDS             complement(2752..3930)
                     /gene="hflX"
                     /locus_tag="AABD07_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HFB2355809.1"
                     /translation="MSGRTGRNSATQAQPERVMLVGVMLDKDDTGSNAARLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLTAHRINALKKQLANLKKQRALRRKSRESGRIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPACSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAHDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAEYCAAAPNTDETEMP
                     "
     gene            complement(3936..5216)
                     /locus_tag="AABD07_001281"
     CDS             complement(3936..5216)
                     /locus_tag="AABD07_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HFB2355810.1"
                     /translation="MKSLFIWLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRTQIGLHALAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDALMSAVYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGSFERACAKGRRQPEAGRKYYRNACHNGAAVYADEAMP
                     VTELLYTAYPVGGGALPYFYGERPDPVPEYEITGNPASIDFSEAAGKIAMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAHQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRRQFGNSLSILRHE
                     AGGIVFSVSGMAGSRIRLTPEDSPERGVTLYLQD"
     gene            complement(5368..6093)
                     /locus_tag="AABD07_001282"
     CDS             complement(5368..6093)
                     /locus_tag="AABD07_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HFB2355811.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENMRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVAYWDFNWRKGGGGARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPV
                     KLGVLYYGDESTQYEPAPVRVDK"
     gene            complement(6166..6843)
                     /locus_tag="AABD07_001283"
     CDS             complement(6166..6843)
                     /locus_tag="AABD07_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HFB2355812.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILEEELQEEIT
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSF
                     RQLGLMP"
     gene            complement(6966..8315)
                     /gene="gshA"
                     /locus_tag="AABD07_001284"
     CDS             complement(6966..8315)
                     /gene="gshA"
                     /locus_tag="AABD07_001284"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HFB2355813.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWNAHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETEKSVLIIPE
                     NHTRNTFYLQNVYALGEIFRSAGCEVRLGSLNPEVTEPAEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGIGQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIDIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGIAD
                     KPFVIVKADAGTYGMGVMSVKSSDEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGVYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            8567..9976
                     /gene="leuC"
                     /locus_tag="AABD07_001285"
     CDS             8567..9976
                     /gene="leuC"
                     /locus_tag="AABD07_001285"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HFB2355814.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDQNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKGKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLNIGGKVPNPAEETDPVKRSGIERALEYMGLKAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKGHKKAGNVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPRQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGHFTDIRTMA"
     gene            10071..10325
                     /locus_tag="AABD07_001286"
     CDS             10071..10325
                     /locus_tag="AABD07_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355815.1"
                     /translation="MNKLFVTALSALALSACAGTWQGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGKKIENATE"
     gene            10387..11028
                     /gene="leuD"
                     /locus_tag="AABD07_001287"
     CDS             10387..11028
                     /gene="leuD"
                     /locus_tag="AABD07_001287"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HFB2355816.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNGKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAIIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAEQTLT
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADKIKAFEEKRRQSQPWLFNG"
     gene            11195..12466
                     /locus_tag="AABD07_001288"
     CDS             11195..12466
                     /locus_tag="AABD07_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2355817.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDSTQKIGRTLTVILETLEALGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETSPSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGAVTEEEKQLLNILLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPDLQNILDSLTDKGYLVLEHPKQKIGGQRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDRCDLLGNTVAVPVIKAVSERLLHTL"
     gene            12482..13213
                     /locus_tag="AABD07_001289"
     CDS             12482..13213
                     /locus_tag="AABD07_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HFB2355818.1"
                     /translation="MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNACPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            13247..14317
                     /gene="leuB"
                     /locus_tag="AABD07_001290"
     CDS             13247..14317
                     /gene="leuB"
                     /locus_tag="AABD07_001290"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HFB2355819.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKFIAQGLDADYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEHEGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENSVQKVLQQGLRTGD
                     IYEEGTKLVSCSEMGDAVLAAL"
BASE COUNT         3434 a         3837 c         3741 g         3373 t
ORIGIN      
        1 cattgaaaat ggttgttctg ccaccgtcat acacagaacc ggtatttgga aaaaaaaata
       61 atccatattg acatcattat tccatttatc gcataaatcc actttttaat ttttttcctc
      121 attaatataa tctcttattt aataaaatca aatacctagc aattcgatct caaattttaa
      181 acgccaacgt gtttgagcgg taacaatgca tactttaagt ttgtaatcct tcatcgtctc
      241 atttttgttt taatcgacta tacgtctaaa gcaacgccgc ccgtcattgt tcggacagta
      301 ttttttcaga cggcattttc ccccgtttgt gaaggcgcaa ggcattgccc aaaaccgcca
      361 gcgaactgaa actcataccc agtgcggcta tccacggttg gacatagccc aaaacggcaa
      421 gcggtacggc gatgatgttg tacgcgcccg cccatatcag gttttgccgg ataatatggc
      481 gggtgcgccg cgcctgatcg agcaggtggg cgacggtacg caaatcttcg ttcaataaca
      541 caatgtccgc gccgtccctc gcaatatccg tcccgcccgc tgcggcggcg gatacgtctg
      601 cctgcgccaa aacgggcgcg tcgttgatgc cgtcgcctat catcagcact tttttccctt
      661 ctttttgcaa ggcttcgacg tattccagct tgtcttccgg cattgcttgg gcgcggtagt
      721 gcgcgatacc caaggcacgg gcggtttcag caactgcttc ttcacggtcg ccactgagga
      781 tgtgcagcgt caggtttttg cctgccaact gccgcactgc ctccgccgcg ctgtctttga
      841 gcgggtcttg caggtagaac acggcttgga aaccgctttg actgccgagg taaaccgcgc
      901 tgccgccgcc ttctgtttgc ggttctttac ctgaaatttc ggcaacatag gatgccctcc
      961 ccaatgccca aacctgtgtt tcgccgttga cggtcagttg cgcacccacg ccttccccga
     1021 tgcggttgag gcgttgtccg acttggattt cggggacgct gccgcctgaa atgcggcagt
     1081 tgagaatggc gcgcgcgagc gggtgttcgg actgctgttc caaactttgc gccactgcca
     1141 gcacttgggc ttcggtcatg ctgccgagca gttcaatccg gcggacggcg ggattgcctt
     1201 gggtcagcgt gccggttttg tcgaaaatga tgtcggtggt ttgggagagg gtttcgattg
     1261 cctgctttcc gccgattaaa ataccttcgc gcgccagcgt accggtagaa gctgccagcg
     1321 cggtcggcgt ggcaagcgac agggcgcagg ggcaggtaat gaccagcagg gcgacggtaa
     1381 tccacaatgc ggtgtgcgca tcggcgtaca gcgtccagcc gatgaagacg gggacggcaa
     1441 gcaggagctc gccgaatatg aaagatgagg cgtattgttc cgccaactcg gcagtacgcg
     1501 gtttttgcgc caaggcgcgg tcgagcaggc ggacgatgtg cgacaggcgc gtgccgccgc
     1561 cggtgcggtc ggtgcgtata atcagagggc tttgcgtgtt gagtgtacct gcggttactt
     1621 tttcagacgg cattttggcg acgggcaggc tctcgccggt cagcatagat tcgttgacgg
     1681 cactgtttcc ttccagcacc gtgccgtcaa cggggatggt ttcgccgggt ttgaccatca
     1741 caatatcgcc tgcttggagt ttgacgacgg cggattcgcg gacatcctgt acggcaggat
     1801 agccgggcat ccggtggcag aaggcgggta tcagtttcac cagcctttcg gcggcatcgc
     1861 ctgccttgcg tcgggcaatg tgttccataa agcgtccgcc cagcaggaaa aacagcagca
     1921 tcgcgatgga ttcgaaatac atcccctgcc ctgcgttggt ggcgaggctg taaatgccgg
     1981 cgatgaaggt catgatgatg gcggcggcaa tcggcgtgtc cataccggcg cggcggtttt
     2041 tcaggtcgcg caacgcgcct tgataaaacg ggacggcgca ataaaatacg acgggcagca
     2101 ccatcaggaa gccgccccaa tggaggatct gcaggaaatc gggttcgatg tcgccgccgt
     2161 aaaggtaggt cggcagcgcg aacatcatcg tctgcatcat acccagtccg gcaacggcaa
     2221 ggcggacgat gtattgtttg cgttcttttt ggttggcggc ttcgattttt tgcgcgtcat
     2281 agggtgcggc ggtgtagcct gtctgccgga ttttcaacag aatgtcggag aggcggattt
     2341 tgccgtcgtc ccagacgacg cggcagcggt gcgtgctgta attgaggtcg atgcggacga
     2401 tgccgtctgt gcgcaaaagc tgctgttcga tcagccagac gcaggcggcg caggtaatgc
     2461 cgctgagcat cagcactgct tcgtgcgtgc cattatgggt ttccacaaag tcggattgga
     2521 cttcgggcag gtcgtacagg cggatttggt cgaggatttc ttggggcggc agttcggttt
     2581 ttttcgcgtc ggcggtgcgt cgtttgtaat aactgcccaa gccggaatcg atgatgcttt
     2641 gtgcgactgc ctgacagccg acgcagcagg tttcgcggtc ttcgccttcg tagcggacgg
     2701 tcagatgcag gttttcggga acgtccagcc cgcagtggaa acaggttttt ttcatggcat
     2761 ttcggtttcg tctgtgtttg gtgcggcggc acaatactcg gcaatggctt cgcgcagtgc
     2821 gtctataccg gtattttcag caacggaaat gcggacggcg gcaatttttc ccgcagcgtc
     2881 gcgccatatg cccgtgtttt gttcttcaga cggcagcagg tcggttttgt tgtacacctt
     2941 gatgcacgga atatcgtggg catggatttc ttgcagtacg ttttccacgt cttcaatctg
     3001 ctgtccgctg ttcggggcag cggcatcgac gacgtgcagc agcacatcgg cttgcgcggt
     3061 ttcttccagc gtggcggaaa atgccgaaat cagtttgtgc ggcagatcgc tgacgaatcc
     3121 gacggtatcg gtcaggataa tgctgcatgc gggactgatg tacagccgcc gcgccgtcgt
     3181 gtcgagagtg gcgaaaagct ggtctttcgc atatatgccc gacttggtca gccggttgaa
     3241 caggctggat ttgccgacat tggtatagcc gaccagcgca aacgttttga ttctgcccga
     3301 ctcgcgggac ttgcggcgca gggcgcgctg ttttttgagg ttggcaagct gttttttcaa
     3361 ggcgttgatc cgatgggcgg ttaatcggcg gtcggtttcc agtttggttt cgcccggccc
     3421 tttcatgccg ataccgccgc gctggctttg caaatgtccg taaccgcgta tcaagcgtcc
     3481 cgccaaatgg ctcaattgcg ccaactcgac ttgcagcctg ccttcctgcg tgcgggcgcg
     3541 gcgggcgaaa atcgccagaa tcagccccac tctgtccaat acgcggcatt ggaggatttt
     3601 ttccaaattg cgttcctgcg tgggagtaag ttcgtggttg aatacgacca aatcaatgcc
     3661 gtctgcggca actgcttccg acagctccgc cgccttgccc gtgccgacaa acagcgcagt
     3721 gtgcgggcgg tcgcgtttgg cagtctccac gcgtacggaa tcgccgcccg ccgctttgac
     3781 cagctcgacg gcttccgcca atgccgtctg aaaaccgttc agacgggcgg cattgctgcc
     3841 cgtatcatct ttatccaaca ttacgcccac cagcatgacg cgttccggtt gcgcctgagt
     3901 ggcactgttc cgtcctgttc tacctgacat aactgtcaat cctgcaaata aagggttaca
     3961 ccgcgttccg ggctgtcttc cggagtaagc ctgatgcggc ttcccgccat tccgctgacg
     4021 ctgaagacaa tgccgcccgc ttcgtgccgg agtatggaca ggctgttgcc gaactgccgc
     4081 cggtaggtat aacgggtaca cgcttccaga caccagcgtc cgcgccagtg gatgaaatat
     4141 ttttcgcctt ttctaaccgc aagtgtctcg ccgccgttta cctcaaaata agggtaatcg
     4201 ggttttcggg ttctaaactg ccatttcgcc tgcgcgcgcc gtccgttgcg gacatagtcg
     4261 aataccgccg tataaagcgt gccgtattcc aaaggtttga gcgggaaaag ggcgaattgg
     4321 tgcgcggtca gcctgccgtt agggtcgttg ccggcggtta aaaccctgac ggggcggatt
     4381 tcgtttttac cctgatacag cttgaaactt ttcatcgcaa ttttgcctgc cgcctcggaa
     4441 aaatcaatgc tggcaggatt gcctgtgatt tcatattccg gcacggggtc gggacgttcc
     4501 ccgtaaaaat aaggcagcgc gccgccgcca accggatagg cggtataaag caattccgtt
     4561 acgggcatgg cttcgtcagc ataaacggcc gcaccgttgt ggcaagcgtt gcggtaatat
     4621 ttccgtcctg cttccggctg ccgccttcct tttgcacagg cgcgctcgaa gctgccgttg
     4681 ccctgattga atacgaggac ggttttgccg ttttcgcgca caaatgccgc acctgcttcg
     4741 tcggtatggc ggtcaagcag cgaaaggcgg tgatagacag cactcatcaa agcgtccact
     4801 tggcgttgct gcgtgcggat gtcgctgtcg gacgattcgg cggcttcctc ttccgtgctg
     4861 atgttttcat gcacgccgtt gtagagatac ccggcaaggc gtgtgcgttc ggtcagcttt
     4921 tgtgcggtgt agtgcggatt gtcgggatgg tgttccccgt gtccgtcttc gggattgagc
     4981 gtgagatagc gtgcgtgcct gcgggcggaa ttttccaaaa ccggcgcgtg tgccagcgcg
     5041 tgcaaaccga tttgtgtgcg gatgcggttg aggtagtgca gcgcatcgcc gccgtccctg
     5101 atttgcggtg cggacggata gacaagttcg cccgcgggca gggattggtt ttgggtatgg
     5161 tagaaaacgc ctgccgccga gcccaataga agcagccaaa taaaaaggga tttcataatg
     5221 ccgccctccc gacgcggcaa cggggtgttt tatcaaaacg gcaaacttgc caatgcggtt
     5281 tccgcttgcc gattgccaaa ccggcaaacc tttcccgtgc cggtgccgaa cccgatgccg
     5341 tctgaacctt cagacggcat cgggtgttta tttgtccact cggacgggtg caggttcgta
     5401 ttgtgtcgat tcgtcgccgt aatacagcac gccgagtttg acggggatgc gtccctgcga
     5461 tttgcggtgg gcgttggaat cgcgcaagga ataggcgcag ccgcagtatt cctgctggta
     5521 gaagttttcg cgtttgctga tttcaatcat acgcgcgccg ccgccgcctt tgcgccagtt
     5581 gaagtcccaa taggccacat catcgtaagg cgcggcggca cggtgtccgc agtcgttgat
     5641 ttgcgccata tttttccagc gtgaaatgcc cagcgaactg gtaaagacgg gaaaaccgtg
     5701 ttcgtgcgcg tattgcgccg ctttttcaaa acgcatatcg aaacacatgg tgcagcggat
     5761 gccgcgttcc ggctcaaact ccatgccttt ggctttggca aaccattctt tgcggtcgtt
     5821 ttcgtagtcg tcgtctttat cgatgaaagg gatgccgaac ttttccgcaa agcgcatgtt
     5881 ttcctctttt cggagcatat actctttgtg cggatggata ttgggattgt aaaaataaat
     5941 ggtgtagtcg atgccggagg caagcatggc ttccatcact tcgccgctgc acggggcgca
     6001 gcaggaatgc agcaagactt ttttatgtcc gccgggcggg acgagtatgg ggcggtcaat
     6061 gtcggtaacg gtaggtttgt tttgtgtttc cattaactta acaatatctg tcgaatacgg
     6121 tcaaagcggc tattttacca gagccgccga atgtaaaaca gggtgtcagg gcatcagccc
     6181 gagctgcctg aacgaacgga cggtttgcga ggtaacgata aaatggtcga gcagcgaaac
     6241 atcaaccagc gacatggcct gtgccagccg ccttgtgaac atgatgtctt cctgcgaagg
     6301 ttcgggcgag ccgcccggat ggttgtgcgc gataatcagg ctgtcggcat attcgtccaa
     6361 tgccagtttg acgatttcgc ggatgtaaat cgtgttttcc gcaaccgtac cgcgcgacag
     6421 ctctctgacc gcaatcagtt ggttttggcg gttcagcagc agcgcgacgc tgacttcgac
     6481 tttttcctgc cccaaatgaa agcgtaaata atcggcaacg gtatcgggat cggataaggt
     6541 aatttcttcc tgcaattctt cctccaatat ccgccgcccg atttccctga ccacggcgaa
     6601 ctgtgtgaaa cttgccgtcc ccatcccttt gtatgccgac agtttgccga cctccgcgct
     6661 catcagcctc cccaagctgc cgaactcctg caataggtag cgcgccaaat cgaccgcgct
     6721 catcccgcgc gtcccgacgc gtaaaaggat tgccaaaagt tcggcatcgc tcaaagccgc
     6781 cgccccgcgt tccaacagct tttccctggg cctttcgcct tccggccatt gcttgatgct
     6841 catgttttcc cttttttaaa tagtctgaga tgccgtctga aacagatgtt cccacacgcc
     6901 aaatatccga aatgccgtct gaaccggatt tccgcttcag acggcatctg tatttcaaaa
     6961 cagtcttacg ccgtttcttc caactcgatt gaagccgcca aaagcgacag acgtgccatt
     7021 acgccgtaaa cgtagaggcg gttatgttcg ttgtccacgt cgcagtcttt ttcagaacgc
     7081 ggcataccga gcgaatccca ttgttcgaat acgcgtttgc aggcttctgg agcttcttgc
     7141 gaattatcgc cgttaccggt aggaatgctg ttggacagcg gcacaaacac cataccgccg
     7201 gcgttgaggt tttcgtccgc accgcgccct tcgtgtacgc ggaaaaagcc gccgatgacg
     7261 aaacggtcca tcatatagac gacgggttcg cacaccgcgc cgttcaaggt ttcataggta
     7321 taaacccctt cttggacaat cacttcgctg acttccaagc cctctttcac cttcgccatt
     7381 ttgttgcggt ttttgcggtt caagccgcgc acttcgtcgg aggatttgac gctcatcaca
     7441 cccatgccgt aagtgccggc atcggctttg acgatgacga aaggtttgtc ggcaatgccc
     7501 gattcgtcgt atttggcttg aattttcgcc agcacgcgtt ctaccgcttc cgccagcgca
     7561 tcttcacctt cgcgcccttg gaagtccaaa ccgccgattt tttcaaaata cgggttgatc
     7621 tgccattcat cgatgtcaat cagcttggca aattcggcgg caacttggtt gtacgcgccg
     7681 aaatgatttg ttttgcggcg cgtcgtccaa ccgccgtgca gcggcggcaa aacggtttgg
     7741 ccgatgcctt tgagaatgtc gggaatgccg gcggacaaat cgttgttcaa caaaaccacg
     7801 caaggcgaaa agccgtcggc aaggtggacg cggtcgcggg ttcgcagcaa aggctcaagc
     7861 aggattttgt cgcccaatgc agtttcaaat tcggccggtt cggttacttc cggattcagg
     7921 ctgcccaagc gcacttcaca ccctgccgaa cggaaaatct cgccgagggc gtaaacgttt
     7981 tgcaggtaaa acgtattgcg cgtgtggttt tcgggaataa tcaatacgga tttctccgtt
     8041 tcgcaggcgc gttgcaccgc atcttgcgcg gcaaccgccg ccagcgggat gaaattcgga
     8101 ttcagattat tgaagccgcc cggaaacaaa ttcatatcga tagacgaaat tttgtaaccg
     8161 gcgttgcgta tatcgaccga accgtaaaac ggcgggcggt gcgcgttcca ctgcgtgcgg
     8221 aaccacgcct cgattttggc gtgattggac aggatttttg cctcaaacgc ctgaagttgc
     8281 gccgaatgtt cgggcgacat aaccggtaat ttcatctttc gtctgcctct gtgtgttttt
     8341 tgacaaggta cagataataa tgcttttgaa agaatgacga caagtattct ttcgtatcga
     8401 atcattcttt agatataacg aaatgaacaa tatgtctaat tttttcgtta aaattgttta
     8461 caaaataaca ccgactcaaa aattagacaa aatctgttgc gcagtataaa gaatacgtct
     8521 aaaatccgcc caatccgcat caccatttat ccaaaagaac aacatcatga cggcacaaac
     8581 cctctacgac aaactctgga acagccacgt cgtccgcgaa gaagaagacg gcaccgtcct
     8641 gctttacatc gaccgccatc tggttcacga agtaaccagc ccgcaggcgt ttgaaggtct
     8701 gaaaatggcg gggcgcaagc tgtggcgcat cgacagcgtg gtctccaccg ccgaccacaa
     8761 caccccgacc ggcgattggg acaaaggcat ccaagacccg atttccaagc tgcaagtcga
     8821 tacgttggat caaaacatca aagagtttgg cgcactcgcc tacttcccgt ttatggacaa
     8881 aggccagggc atcgtacacg ttatggggcc cgaacaaggc gcgaccctgc ccgggatgac
     8941 cgtcgtctgc ggcgattcgc acacttccac ccacggcgca ttcggcgcac tggcacacgg
     9001 catcggcact tccgaagtcg aacacacgat ggcgacccag tgcattaccg cgaaaaaatc
     9061 caaatctatg ctgattgccg ttgacggcaa attaaaagcg ggcgttaccg ccaaagacgt
     9121 ggcgctctac atcatcgggc aaatcggcac ggcgggcggc acgggttacg ccgtcgagtt
     9181 cggcggcgaa gccatccgca gcctttcgat ggaaggcagg atgaccctgt gcaatatggc
     9241 gattgaggca ggcgcgcgtt ccggtatggt tgccgtcgat caaaccacca tcgactatgt
     9301 caaaggcaag cccttcgcac ccgaaggcga agcttgggac aaagccgtcg agtactggcg
     9361 cacgctggtg tctgacgaag gcgcggtttt tgataaagaa taccgtttca acgccgaaga
     9421 catcgaaccg caagttactt ggggcacgtc gcccgaaatg gttttaaaca tcggcggcaa
     9481 agtgccgaat cccgccgaag aaaccgatcc ggtcaaacgc agcggcatag agcgcgcact
     9541 cgaatatatg ggtttgaagg ccggtacgcc gctgaacgaa atccctgtcg atatcgtctt
     9601 tatcggctct tgcaccaaca gccgcatcga agacttgcgc gaagccgctg ctatcgccaa
     9661 aggccataaa aaagccggca acgtacagcg cgtgttaatc gtccccggct ccggtttggt
     9721 taaagaacaa gccgaaaaag aaggcttgga caaaattttc atcgaagccg gttttgaatg
     9781 gcgcgaaccg ggctgttcga tgtgccttgc gatgaatgcc gaccgcctcg cgccgaggca
     9841 acgctgcgcc tccacgtcca accgcaattt tgaaggccgc caaggcaacg gcgggcgcac
     9901 ccacctcgtc agccccgcta tggccgccgc cgccgccgtt accggacact ttaccgacat
     9961 ccgcacgatg gcgtaagtat tttcaggcag tctttaagaa tttgacgagg ccgtctgaaa
    10021 tatgtcccgt aaggcagaaa cacctaatat tcaaaccaag gagtttaacc atgaacaaac
    10081 ttttcgttac cgccctgtcc gccctcgcct tgtccgcctg cgccggcact tggcagggcg
    10141 cgaaacaaga caccgcccgc aaccttgaca aaacacaggc cgccgccgaa cgcgccgccg
    10201 aacaaacagg caacgccgtc gaaaaaggtt gggacaaaac caaagaagcc gtcaaaaaag
    10261 gcggcaatgc cgtcggacgc ggcatttccc atctcggcaa aaaaatcgaa aacgccaccg
    10321 aataaccgat ttgcgatgcc gtctgaaacc gtttcagacg gcatcgtcag cacaagacgc
    10381 aaacccatga aagcctttac caaaatcacc gccatcgtcg ccccgctcga ccgcagcaac
    10441 gtcgataccg atgccatcat ccccaaacaa tttctgaaat ccatcaaacg cagcggcttc
    10501 ggccccaacg cctttgacga atggcgttac ctcgaccacg gcgaaccggg catggacaac
    10561 ggcaaacgcc cgttgaaccc cgatttttcc ctgaaccagc cgcgttacca aggcgcgcaa
    10621 atcctgttga cgcgtaaaaa cttcggttgc ggctcttcac gcgaacatgc cccttgggca
    10681 ttggacgact acggcttccg cgccattatc gcccccagct tcgccgacat cttctttaac
    10741 aactgctaca aaaacggcct tttgcccatc gtgttgaccg aagaacaagt cgaccggctt
    10801 ttcaaagaag tcgaagccaa cgaaggctat cggctctcca tcgaccttgc cgagcaaacc
    10861 ctgaccaccc cgggcggcga aacattcaca ttcgacatta ccgaacaccg caaacactgc
    10921 ctcttaaacg gcttggacga aatcggactg accctgcaac acgccgacaa aattaaagcc
    10981 tttgaagaaa aacgccgcca aagccagcct tggctgttta acggttaaaa cctatgccgt
    11041 ctgaaggctg ttcagacggc attcctgata acatataatt gctgcggcta atgtaaacag
    11101 aggggcgata aattgttttc atcttttaag cgggcttagc aacactctaa attaatgcaa
    11161 ctctccattt caaataaatt tttagatttt taatatgcaa caaattaaat ttattgactt
    11221 attttccgga atgagtggca tcaggaaagg attcgaacaa gcctgtcgga aacagtcggt
    11281 tgcttgcgaa tgtgttttta cttcagaaat caaaccggca gctttggaag tattgaagca
    11341 aaactaccct gatgaagtgc cgtatggaga tataacgaaa attgaaacag gggatattcc
    11401 cgattttgac atcctgttgg caggcttccc ttgtcaggct ttttctttcg ccggaaaaag
    11461 attaggcttt gaagatacac ggggaacgct tttctttgat gtggcaagga ttttaaaggc
    11521 aaaaaaacca aaaggtttta ttttggaaaa tgtggaagga ttggtgacac acgatagaaa
    11581 agattcgaca caaaaaatag ggcgcaccct gaccgttatt ttggaaacct tggaagcatt
    11641 gggctactat gtttcttgga aagttttaaa tgcaaaagat ttcggcattc cccaaaacag
    11701 gaagcgcatt tatctgacag gcagtttgaa atccaaaccc gacttatctt tcgaaacaag
    11761 cccaagtccg aaattaaaaa atattttgga atcgggactg cctactgaaa gcagcccttt
    11821 catcaaaaaa ttgctaaaaa aatttccccc gtccgaactg tacggaaaat cagtaaaaga
    11881 caaacgggga gggaaaaaca atattcacag ttgggatatt gaattaaaag gcgcagtaac
    11941 cgaagaagag aagcaattgt taaatatcct tctaaaagaa cggaggaaaa aaaaatgggc
    12001 ttcagaaatc ggcatagatt ggatggatgg gatgcctttg acaaaagcgc aaatttcaac
    12061 tttctataaa caccccgatc tccaaaatat tttggacagc ctgacagaca aaggctattt
    12121 ggttttagag catccgaaac aaaaaattgg cgggcaaaga atcaaagatg aatccctgcc
    12181 caaaggctac aatattgttt caggtaaaaa atcttttgaa atcaataaaa tattagatcc
    12241 aaacgatgtt gcgccaacct tggttgcaat ggatatggag caccttttcg tcgttgacaa
    12301 cggcggtttg cgtacactta ccggaaaaga agggttacgc ttattcggct atccggacga
    12361 ttattcgttt gatattccca aaaaagacag atgcgattta ttgggtaata ccgttgccgt
    12421 ccctgtgatt aaggcggtat ctgaaagact tctgcatact ttataaaccg acagggataa
    12481 aatgataaaa cttactgcac aacaaatatt tgataagttg ctggatgaag aaaaaatctt
    12541 atcggccaat ggtcaaatta gatttttctt aggagatgtg gatattatcg tcaaacaaaa
    12601 agatgttgtc ggcaacatca ttcaggaatg gctcggcgga tggttgagaa aaagggaaat
    12661 tgaatttgat gtttcaacca atacccaaat gcctcccgat ttctttttaa ataaaaaaga
    12721 ccgcagcaga gaattgttgg aagtaaaggc gttcaaccga aatgcctgcc cgggttttga
    12781 tattgcagat tttaaaatgt attctgatga aatcattcat aagccctata tgctggatgt
    12841 agattattta atattcggtt acgatatgga cgacaacggc aatgtaacca tcaaggattt
    12901 atggcttaaa aaagtatggc aaattaccag aagcatggat gggtgggcaa ttaatcttca
    12961 agtcaaaaaa ggcgtggtgc ataaaatccg cccgggtgtt tggtacagca taaataaaaa
    13021 gaatatgcct atgtttgaat gcttggaaga ttttgtttcc gcaattgaag aaaccgttta
    13081 tcaaaacccg gcaacacggc ataacgcatc cttatggaaa aagaaatttg aggaagctta
    13141 taaaaaacac tacaaccgat cgatttccat accccgttgg cacgaaattg cacacaaata
    13201 caaaaagaaa taacccttca accatcaacc cataaggaaa cttgaaatga ccaaacatat
    13261 cgccatcctc cgaggcgacg gcatcggtcc cgaaatcgtc gccgaaaccg tccgcgtact
    13321 cgacaaattt atcgcccaag gcttggatgc cgactacgaa tacgcgcctt tgggcggcga
    13381 agcctacgac gaatacggcc atccttatcc agaatttacg caaaacctct gccgcaaagc
    13441 cgatgccgtc ctgcttggtg cagtcggttc gccccaatac gacaatctcg accgtccgtt
    13501 gcgccccgag cgcggcttgt tagcaattcg taaggatttg aacctgtttg ccaatttgcg
    13561 tcctgccgtt ttatatcccg aattagccaa cgcctccacg ctcaagcctg aaatcgttgc
    13621 cggtttggat attttgattg tgcgcgaact taccggcgat atttatttcg gcgaaccgcg
    13681 cggcatccgt gttttggaaa acggcgaaca cgaaggctac aacaccatga aatacagcga
    13741 aagcgaaatc cgccgcatcg cccacgtggc cttccaatcc gcccaaaaac gcagcaaaaa
    13801 agtctgctcc gtaggcaaag ccaacgtttt ggaaaccacc gaactgtggc gcgaaatctt
    13861 tgaagaaatc ggcaaacaat atcccgatgt cgagctttcc catatgtatg tggacaatgc
    13921 cgccatgcaa ctcgtgcgcg cgcccaaaca gtttgacgtg attgccaccg gcaacatctt
    13981 cggcgacatc ctctccgacg aagcctccat gctgaccggc tccatcggta tgctgccttc
    14041 cgcttctttg gacgaaaacg gcaaaggcct gtacgaaccg tctcacggct ccgcccccga
    14101 catcgccgga caaaacaaag ccaacccgct ggccaccatc ctctcgcttg ccatgctgct
    14161 gcgttacagc ctgaacgacg aagcgcgcgc gcaacaagtc gaaaactccg tccaaaaagt
    14221 gctgcaacaa ggcttgcgta ccggcgatat ttacgaagaa ggcacaaaac tcgtttcctg
    14281 ctccgaaatg ggcgacgcgg tactcgccgc cttgtaaaaa acaaggggct gtactagatt
    14341 atccctaaat tccacaccga tcccgcagga tttttagctg ccggg
//
LOCUS       DAWXHA010000058        14243 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.058, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000058 DAWXHA010000000
VERSION     DAWXHA010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14243
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.058"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(1..72)
                     /locus_tag="AABD07_001291"
     tRNA            complement(1..72)
                     /locus_tag="AABD07_001291"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37..39),aa:Thr,seq:cgt)
     gene            179..658
                     /locus_tag="AABD07_001292"
     CDS             179..658
                     /locus_tag="AABD07_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355820.1"
                     /translation="MFVNEKYPYATLFAGLVFLTLPFALAVHDAFACAFGRAGLLVSV
                     SDGGFGRRGGWDGTVWFVFGVFAFLNVVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAVAWIFKLLLGSAALGGLSGEAVSEYAFAVWLVSMLTLPKRLTRAPVQPVVFHRKK"
     gene            753..1376
                     /gene="rsmG"
                     /locus_tag="AABD07_001293"
     CDS             753..1376
                     /gene="rsmG"
                     /locus_tag="AABD07_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HFB2355821.1"
                     /translation="MERKERLRAGIAAMGPDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLRQAAIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTAHLLKDG
                     GYWAAMKGVYPQGEIGRLPQDVCVEKVQRLDVPGLDAERHIVILSKR"
     gene            1476..2249
                     /locus_tag="AABD07_001294"
     CDS             1476..2249
                     /locus_tag="AABD07_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFB2355822.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGAKAYLALADELAARVSGK"
     gene            2448..2660
                     /locus_tag="AABD07_001295"
     CDS             2448..2660
                     /locus_tag="AABD07_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355823.1"
                     /translation="MSAARRLVLIFVNPLYRHSRKNKKIKNTKLKYRHSRAGGNLGLS
                     VRKLIGKNGFSNPETPDSCFRGNPVF"
     gene            complement(2995..3579)
                     /gene="rnhB"
                     /locus_tag="AABD07_001296"
     CDS             complement(2995..3579)
                     /gene="rnhB"
                     /locus_tag="AABD07_001296"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HFB2355824.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDALAEMIKEQAVAWHVAASTPEEIASLNILHATMLAMKRAVYGLAARPEKIFIDG
                     NRIPEHLGIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRRPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQALF"
     gene            complement(3647..5542)
                     /gene="mnmG"
                     /locus_tag="AABD07_001297"
     CDS             complement(3647..5542)
                     /gene="mnmG"
                     /locus_tag="AABD07_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HFB2355825.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKASIREMLENQENLDLFQQAVEDVTLEGERISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(5715..7142)
                     /locus_tag="AABD07_001298"
     CDS             complement(5715..7142)
                     /locus_tag="AABD07_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HFB2355826.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDCDNHHFRGGPAYYITHGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            7301..8293
                     /gene="pdxA"
                     /locus_tag="AABD07_001299"
     CDS             7301..8293
                     /gene="pdxA"
                     /locus_tag="AABD07_001299"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HFB2355827.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKHLLRA
                     RAEALGKSVVLRDFDPESGGAHGEGGLEVLHIPAAEAVEAGWLNPANAAYVLQLLDTA
                     LAGISDGIFDGIVTAPLHKGIINAARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLR
                     VALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGH
                     LGHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKY
                     HSFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            complement(8523..11282)
                     /locus_tag="AABD07_001300"
     CDS             complement(8523..11282)
                     /locus_tag="AABD07_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HFB2355828.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFLGYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNAGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHAACPRCAGTGVIRGIESTALHVLRMVQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     VPAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKIEVREAAGKTAGQKARADKAET
                     RNNGNRRRNERGDRATERANEAEIQSRNVQPAAPVADAAPPETEGQTGKRRRNGSRNE
                     RGQTAPETAAVAETAVQTAENTPPEPYTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPLI
                     ATPVQTASSAVSNGDALIYDAAEKIRRAAADILPEGAAPKAAAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKPSEAATVPAEEMIQV
                     ETRQG"
     gene            11775..12767
                     /locus_tag="AABD07_001301"
     CDS             11775..12767
                     /locus_tag="AABD07_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFB2355829.1"
                     /translation="MKTHEISKGSVSLIGVAEHEAGQRLDNYLIKILKGVPKGYIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFEVVYEDDA
                     LLVVNKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAEPPPDLAQFAVMLENGTKM"
     gene            12918..14090
                     /gene="lpxB"
                     /locus_tag="AABD07_001302"
     CDS             12918..14090
                     /gene="lpxB"
                     /locus_tag="AABD07_001302"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HFB2355830.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARL
                     TGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRELVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRAGIPTLHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARKTLGADVGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLERYPAARFLLPAATEATKRRLAEVLQRPEFAGLALTVTDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQSEAKPEKLAAALADWYEHPDKVAALQQDFGALHLLLKKDTADLAARAVLEEAGC"
BASE COUNT         2779 a         3635 c         4509 g         3320 t
ORIGIN      
        1 gccggagaag ggaatcgaac ccccgacctt cgcgttacga atgcgctgct ctaccgactg
       61 agctacaccg gcgtttttcg ttatgatata tataaacggt tgtttgtgca acttttcggg
      121 cgggcggcaa ggcggtgcgc ggtataatgc ggcctgcttc ggaagagggg ggacggcgat
      181 gtttgtgaac gagaaatatc cttatgcgac cctgtttgcg gggctggtgt ttttgacgct
      241 gccgtttgcg ttggcggtgc atgatgcctt tgcatgtgcg ttcggacggg cggggctgct
      301 ggtgtcggtg tcggacggcg gattcggccg gcgtggcggt tgggacggca ctgtttggtt
      361 tgtgttcggt gtgtttgcgt ttttgaatgt ggttgtgtcg gcgggcctga cgaaactggc
      421 gtacaaaaag atgatgcggc ggcattcgcg ttacgcgctg tttctgtcgg gcgtggcggc
      481 ttgcgcggcg gtggcttgga ttttcaagct gttgttgggc agtgccgcct tgggcgggct
      541 gagcggggag gcggtgtcgg aatatgcgtt tgccgtgtgg ctggtgtcta tgctgacgct
      601 gccgaaacgc ctgacgcgcg cgccggtgca gcctgtggtg ttccacagga aaaaatagga
      661 cggaacggaa atgccgtctg aaacccgata cgcggtttca gacggcatgt ttttccgcta
      721 acattacgcc tgaatatgga caggaagcag atatggaacg taaagaacgc ctgcgtgcag
      781 gcattgccgc gatggggccg gatatttcgg aaacggcgca ggacaggctt ttggcctatg
      841 tggatttgtt gaaaaagtgg aacaaaacct acaatctgac cgccctgcgc gacgaggaaa
      901 aaatgattgt ccatcatctt ttggacagcc tgacgctgct gccctatatc gaaggcgcac
      961 agacgatgct ggatgtcggt tcgggcggcg gccagcccgg cattccggcg gcggtgtgcc
     1021 gtccggatgt gcagataacc ttgttggatg cgaatacgaa gaaaacggct tttttgcggc
     1081 aggcggctat cgagttgggg ctggacaatg tgcgcgtggt gtcggggcgc gtggaggcgg
     1141 tttcggacgt gcgtgccgac gtggttacca gccgtgcgtt tgcggaactg gcggattttg
     1201 tgtcgtggac ggcgcacctg ttgaaagacg gcggctactg ggcggcgatg aagggcgtat
     1261 atccgcaggg ggaaatcggc cgcctgccgc aggatgtgtg cgtcgaaaaa gtccaaaggc
     1321 tcgacgtgcc gggcttggat gcggaacgcc atatcgtcat cctgagcaag cgttgagcgc
     1381 gcttcagacg gcatgaatac cttttttgtg cggataaagg taaaattccg cactgttttt
     1441 ctttttttca acatcagacg ggacacgggc gggacatgag tgcgaacatc cttgccatcg
     1501 ccaatcagaa gggcggtgtg ggcaaaacga cgacgacggt aaatttggcg gcttcgctgg
     1561 catcgcgcgg caaacgcgtg ctggtggtcg atttggatcc gcagggcaat gcgacgacgg
     1621 gcagcggcat cgacaaggcg ggtttgcagt ccggcgttta tcaggtctta ttgggcgatg
     1681 cggacgtgca gtcggcggcg gtacgcagca aagagggcgg atacgctgtg ctgggtgcga
     1741 accgcgcgct tgccggcgcg gaaatcgagc tggtgcagga aatcgcccgg gaagtgcgtt
     1801 tgaaaaacgc gctcaaggca gtggcggaag attacgactt tatcctgatc gactgtccgc
     1861 cttcgctgac gctgttgacg cttaacggct tggtggcggc gggcggcgtg attgtgccga
     1921 tgttgtgcga atattacgcg ctggaaggga tttccgattt gattgcgacc gtgcgcaaaa
     1981 tccgtcaggc ggtcaatccc gatttggaca tcacgggcat cgtgcgcacg atgtacgaca
     2041 gccgcagcag gctggttgcc gaagtcagcg aacagttgcg cagccatttc ggggatttgc
     2101 tttttgaaac cgccatcccg cgcaatatcc gccttgcaga agcgccgagc cacggtatgc
     2161 cggtgatggc ttacgacgcg caggcaaagg gtgccaaggc gtatcttgcc ttggcggacg
     2221 agctggcggc gagggtgtcg gggaaatagg tcaatccaaa tcgggctgcc cgtgccttta
     2281 tgctgtttgg ccgggtgcgt taatatggcg gattaaaata aaaatactta tatcgtcatt
     2341 tatagcggat taacaaaaac cggtacggcg ttgccccgcc ttagctcaaa gagaacggtt
     2401 ccctaaggtg cccaagcacc aggcgaaccg gttccgtact atctgtactg tctgcggccc
     2461 gccgccttgt cctgattttt gttaatccgc tatatcgtca ttcccgcaaa aacaaaaaaa
     2521 tcaaaaacac aaaactgaaa tatcgtcatt cccgcgcagg cgggaatcta ggtctgtcgg
     2581 tacggaaact tatcgggaaa aacggttttt ccaaccctga gactccggat tcctgttttc
     2641 gcgggaatcc ggttttttga gtttcagtca tttttgataa attcttgcag ctttgagttt
     2701 ctagattccc gcttttgcgg gaatggcggt ttggaagtta cctgaaattc aaaaaaaaaa
     2761 acggaaaccg gacggattgg attcccgcct gcgcgggaat gacggatttt aggttttttt
     2821 gattttctgt ttttcgcggg aatgacggtt gggaagtttc ccgaaactta aaaacaactg
     2881 aaacccaaaa aactaaatta ccgcctgcgg gggaatgacg gttcgggttc tttctctttg
     2941 aagttgcgat gctggaaatg ccgtctgaag ttcagacggc atttttgtgc cggtttaaaa
     3001 caaggcctgc tgcgcgagca ggtttctgac gggggcgaag tcgcggcggt gttcgggcag
     3061 cacgccgtat tgtttgagtg cttccagatg ctgctttgtg ccgtaacctt tgtgtttgtc
     3121 gaaaccgtat tggggacggc gttgcgccag tgcgtacatt tccgcatcgc gtgcggtctt
     3181 tgccaaaacg gatgcggcgg agatttcgat gattttgctg tcgcctttga cgactgcttc
     3241 ggcagggatg cctaaatgtt cgggaatgcg gttgccgtcg atgaatattt tttcgggacg
     3301 cgcagccaaa ccgtaaacgg cacgtttcat ggcgagcatg gtggcgtgca ggatgttgag
     3361 gcttgcgatt tcttcgggcg tggaggcggc gacgtgccac gcgaccgcct gttctttaat
     3421 catttcggca agcgcgtcgc gttttttctc gctgagtttt ttggagtcgg tcagtccggg
     3481 caggtcgaat gtttccggaa ggatgacggc ggcggcaaac acgctgccga ccaaaggtcc
     3541 gcgtcctgct tcgtccacgc cggcggtcag tatgtgcatg atgtttcctg tcgggatggt
     3601 acgatgccgt ctgaaaatgg tttcagacgg catcgtaccg atgtgtttat ttcgcgtctt
     3661 taaacccgcg cttcaaatgc accatcagca gtgcgacggc ggcaggcgta acgccggaaa
     3721 tgcggcttgc ctgcccgacg gtttcgggtt tgtgctggtt gagcttttgt tgcacttcgg
     3781 ccgacaagcc tttgactctg ccgtaatcga tgccgtcggg cagctttaag gtttcgatgt
     3841 cgcggcggct gtcgatttct tcgttttggc ggtcgatata gccttggtat ttgacttgga
     3901 tttcgacttg ctcgatgact tcggcagaga ggttttcaga cggcatcgcg ccttcgagcg
     3961 tcatcagcgc ggcgtaatcg aggttcgggc ggcgtaacaa atcgtgcagg ttggcttcgc
     4021 ggctgagttt ttgcccgaat acgcggattt gttcgtcttc ggcgagtttt tgcggcgtgt
     4081 accacgttgt tttcaaacgt tggatttcgc gttcgacggc ttcgcgtttt tcgttgaaca
     4141 tgcgccattg cgcttcaccc accaagccga ttttgtagcc gtcttcggtc aggcgcatat
     4201 cggcgttgtc ttccctgagt tgcaggcggt attcggcgcg gctggtaaac atccggtaag
     4261 gttcgttcag gcctttggtg atgaggtcgt ccaccaatac gccgaggtag gcttgttcgc
     4321 ggcgcagcag gagcggatct tgtccgcgga cgtattgcac ggcgttcgcg cccgccagca
     4381 atccttgcgc ggcggcttct tcatagcctg tcgtgccgtt gatttgcccg gcgaaaaaca
     4441 gtccctcaat ggttttggtt tcgaggcttg ctttgaggtt gcgcggatcg aagtagtcgt
     4501 attcgatggc gtagccgggg cgcaggatat gggcgttttc aagacccttc atactgcgca
     4561 cgagcgcgat ttggatgtcg aacggcaggc tggtggagat accgttgggg tagtattcgt
     4621 gcgtggtcag accttcgggt tcgaggaaaa tctggtggct gtctttgtcg gcgaagcggt
     4681 tgattttgtc ttcgatagac ggacaataac gcgggcccac gccttcgatt ttgccggtaa
     4741 acatcgggct gcggtcgaag cctgagcgga tgatgtcgtg ggtttgcgtg ttggtatgcg
     4801 taatccagca ggacacttgg cgcgggtgca tttcggcgtt gccgcgcacg gacatgacgg
     4861 gaacgggcgt gtcgccgggc tgttcggtaa gttgggaaaa gtcaatcgtg cgtccgtcaa
     4921 tacgcggcgg cgtgccggtt ttcagacggc cttgcggcag cttcaattcg cgcaaacgtc
     4981 cgccgagcga tttggcggct gggtcgccgg cgcggccgcc ttcgtagttt tccaaaccga
     5041 tgtggatttt gccggacaag aacgtgcctg cggtcagcac cacggcgcgt gctttaaact
     5101 ccacgcccat cgcggtgatc acgccgctga tgcgttcgcc ctcgagtgtt acgtcttcga
     5161 cggcttgttg gaaaaggtcg aggttttctt ggttttccaa catttcgcgg atggaggctt
     5221 tatacaggat gcggtctgcc tgcgcgcgcg tggctcgtac tgccgcgcct ttgctggcgt
     5281 tcaggcggcg gaactggatg ccggatttgt cggtcgccaa cgccatcgcg ccgcccaatg
     5341 cgtcgagttc gcgtaccaaa tgccctttgc cgatgccgcc gatagagggg ttgcacgaca
     5401 tttgtccgag cgtttcgata ttgtgtgtga gcaaaagcgt ctgcgcgccc atacgggcgg
     5461 cggcaagcgc ggcttccgtg ccggcgtgtc cgccgccgac gacgatgaca tcgtaggttt
     5521 tggggtaaat catgtgggtc atgtgtgtat tgcctatcgg tttttcagac ggcattccaa
     5581 gcaggatgcc gtctgaaaaa cgaaacggat tcaaaagtaa agggttggga ttgtacgcct
     5641 gttcgccctg tttttacagt gcgcggaaag ggaaaagccg cttcgcgggg aagcggctcc
     5701 ggtaagggtg ggatttacca aacatcggat ttgatgcggc gtttcaggcc cggatgttcg
     5761 gaaagtttga actcggggtc tttgcccatt ttcagcttgg cggtgtaatc gcgcagcagc
     5821 ataaacgcca atggcgagag cagcaggatg gcgacgaggt tgatccacgc catgatgccc
     5881 atcgccatat ccgccatatc ccagaccaaa ggcacattgg caaccgcgcc gaaatagacc
     5941 cacgccaaaa ccagcatacg gaaaacggcg gtaatcagcc aatggctttt gatgaattgg
     6001 acgttggact cggcataggc atagttgccg ataacggtgg aaaaggcaaa cataaacagg
     6061 atgacggcga ggaaacccgc gccccattgc cccacttggc tgacaatcgc cgcctgcgtc
     6121 agcgccgcac cgctcaaatc gccataaggc tgttggtaaa tcaagatgat gaaggcggtg
     6181 caagaacaaa cgatgatggt atcgacaaac acgcccagca tttgaatcat accttgcgaa
     6241 acagggtgtt tcacttcggc ggcggcggcg gcgttcggcg cggaacccat acccgcctcg
     6301 ttggaataca ggccgcgttt gatgcccatc atcatcgttt gcgaaatcag accgccgagt
     6361 aagccgcctg ctgccgcgtc gaatttgaac gcgcccgaaa aaatctgacc gaacacgtcc
     6421 ggaatcatcg gaatattggt caaaatgatg aaaagcgcga taaagaggta caaaaccgcc
     6481 atcaggggca cgacgatttc cgccgctttg gatatgcgcc tgatgccgcc gaagataatc
     6541 ggcgcggtta aaatcaccag ggcgacgccg acataatgag gctcccagcc ccacgccgct
     6601 ttgacggtat cggcgatggt attggtctga accgcttcaa acacaaaacc gaaacagaaa
     6661 atcaggctca gggcgaacaa cacgcccagc catttctgcc ccagaccgtg cgtgatgtag
     6721 taggcagggc cgccccggaa atggtggttg tcgcagtcgc ggactttaaa gagctgcgcc
     6781 agcgaagatt cgacaaacgc cgaactcatg ccgattaagg cggttaccca catccaaaac
     6841 accgcgcccg gcccgccgac tttgatggcg attgccacgc ccgcgatatt gcccacgccc
     6901 acgcggctgg caaggccggt tacaaatgcc tgaaacggcg tgatgccgtg agggtcgtcc
     6961 ccctgtttgc ggccgccgag catttctttg atgctgcgcc cgaacaggcg gaattggaca
     7021 aagcccgtgg ttacggtgaa gaaaagcccc gtacccaaaa gcatataaac caagtatgac
     7081 cacatcggat cgttgatggc gccgacccag ccgtgcagcc attcggtaaa gttctcgttc
     7141 atatcgcttc cttaaagttg aaacccgcac atatggcggt atgcaagcag ggtttaaatt
     7201 ttgtaaacgc ccattctagc agattgtcaa caaaatcaga aaaatttaca tcgccgcgcg
     7261 cctgtggcgt tagaatcgcg ttttgtttgg agcaaacacg atgaaacagc ctgtttttgc
     7321 cgttacttcc ggcgagcctg ccggcatcgg ccccgatatt tgtttggact tggcgtttgc
     7381 acgcctgccc tgccgctgcg cggtattggg cgacaaacac ctgttgcgcg cgcgcgccga
     7441 agccttgggc aaaagcgtcg tcctgcgcga cttcgatccg gaatcaggcg gcgcgcacgg
     7501 agaaggcggg ctggaagtgc tgcacatccc tgccgccgaa gcggttgagg cagggtggct
     7561 caatcccgcc aacgccgcct atgtgctgca acttttggac accgcgctcg caggcatttc
     7621 agacggcatt ttcgacggca tcgttaccgc gccgctgcac aaaggcatca tcaacgccgc
     7681 gcgcgcaagc acaggttttt tcagcggaca caccgaatat ctggcggaaa aaagcggcac
     7741 ggggcaggtc gtgatgatgc ttgccggcaa aggcctgcgc gtcgccctcg taacgaccca
     7801 cctgccgctg aaagacgttg ccgccgccat cacgcaaccg ctgattgaaa gcgtcgcacg
     7861 cattttgcat cacgacttaa aacacaaatt cggcatcaaa aatcccaaaa tcctagtcgc
     7921 cgggctcaat ccccacgccg gcgaaggcgg acacctcgga cacgaagaaa ccgacaccat
     7981 tatccccgcg ctcgaaaacc tgcgccgcga agggataaac ctcgccggcc cgtatccggc
     8041 ggacacattg ttccaaccgt ttatgctcga aggtgcggat gccgtattgg cgatgtacca
     8101 cgaccaaggg ctgcccgtgt tgaaatacca cagcttcggg cagggcgtga acatcacgct
     8161 ggggctgccc tttatccgca cctccgtcga tcacggcacc gcgctcgatt tggcggcaac
     8221 cggcagggcg gactccggca gcctgataac tgccgtggag accgccgtcg agatggcgcg
     8281 cggcagcctt taaagatgat aaaagacccg tcattcccgc gcaggcggga atccggacct
     8341 tcgggcggcg gcaatattca aaggttatcc gaaagtttga ggttctagat tcccgttttc
     8401 acgggaatga cgaaaggtgg cgggaatcac gggaatggcg aagtttcagg cggtattgca
     8461 ggtatccgaa accatgcaaa aagaggttct gcggaacaga acctcttttt gccgccgtcg
     8521 gttcagcctt gccgggtttc gacttggatc atttcttcgg cagggacggt tgcggcttca
     8581 gacggttttg gctgttcgga acggcgcaaa ccgcgtccgg cttggacttc gggttgtgcc
     8641 gcccatgcct tcaatgcggc agggtcggtt tcgatcagga cgagtccgcc ggtttgtgcg
     8701 gtttcccgtg cctgttccgc cgcagccgta aaggttgcgg tttcagacgg catttcctgt
     8761 gctgcggctt tcggtgccgc gccttcgggc aggatgtcgg cggcggcacg gcggattttt
     8821 tccgccgcat cataaatcag tgcgtcgccg tttgaaacgg cggaagatgc cgtctgaacg
     8881 ggtgtggcga tgagcggatc ggcaatgctg acggtaatcg gcgcgtttgc gtcggtttcg
     8941 ccgaaaacgt gcgcggcggc ggaacggact ttgtcggcgg tgtcgtgaat attcaggtac
     9001 tgctcgattt tggcggcaga cgggatattg cgttttttgc cgttttgacg gcggtcgcgc
     9061 tgattgttgc gttcgcggcg ttctttggca tcgcggctgt cgcgttcgcg gcggttgcgt
     9121 tcggatttgg gcttgctgcc tttgtcttct gcggtatacg gttcgggcgg cgtgttttcc
     9181 gctgtctgaa cggctgtttc ggcaacggcg gcggtttccg gtgcggtttg gccacgttcg
     9241 ttgcggctgc cgttgcggcg gcgttttccg gtttgacctt cggtttcggg cggtgcggca
     9301 tctgcaacgg gtgcggcagg ctgtacgttg cggctttgga tttccgcttc gttggcgcgt
     9361 tcggtggcac ggtcgccgcg ttcgttgcgg cggcggttgc cgttgttgcg cgtttcggct
     9421 ttgtcggcgc gcgctttctg tccggcagtt ttgcccgccg cttcgcggac ttctattttg
     9481 ctgccttcgc gtttgctgcg gcgcgggttt tggcggcggt tgttggcgcg gctgccgctg
     9541 cggtttgccg tgctgcgttt ttcggaggtt tcggcagcgg gtacggcttg ggtttcgctg
     9601 ccgccgaaaa tgcgtttgag ccatgctttg aagctgtccc accaggaggt ttttttctcg
     9661 ggggcggcag tcggggcggg gctggtgtgg cgcacgcctt tgacggcggg ttcggggcgg
     9721 gcggctttgg ctttttcgcc gccgaaaggt ttggcggatt cgtcttcttc aggctcggca
     9781 acgcgcttgt agctcggttc gccgtcttct tctacgtcgt cggtgcggat gcggttgatt
     9841 tcgtagtgcg gattttcgag gtggatgttc ggaatcagga cgacgttcac atccaaacgc
     9901 tcttccattg caaacagctc ggcgcgtttt tcgttcagca ggaaggtggc gacatcgacg
     9961 ggcacttggg cgcgcacttc gccggtgttg tccttcatcg cttcttcctg aaccatgcgc
    10021 aaaacgtgca gggcggtgga ttcgatgccg cggatcacgc cggtgccggc gcagcgcgga
    10081 caggcggcgt ggctgctttc gcccaaagcg ggtttcaggc gttggcggct caattccaaa
    10141 agtccgaaac gggagagttt gcccatctgt acgcgggcgc ggtctttttt gagtgcgtcg
    10201 cgcaggacgt tttccacatc gcgctggtgt ttggggtttt ccatgtcgat gaagtcgatg
    10261 acgaccaagc cgcccaagtc gcgcaggcgc atttgtcggg cgacttcttc ggcagcttcc
    10321 atattggttt tgaaggcggt gtcttcgatg tccgcgccgc gtgtggcgcg tgcggagttc
    10381 acgtcgatgg agacgagggc ttcggtgtgg tcgatgacga tcgcgccgcc ggagggcagg
    10441 ctgacgctgc gcgagaacgc gctttcgatc tggtgttcga tttggaagcg ggaaaacagc
    10501 ggcgtgtggt cttcgtagag tttcagacga cctgcgttgc ccggcatgac gtagctcatg
    10561 aactcggcaa cttggtcgta aacttcttga ttgtccacca aaatttcgcc gatgtcggga
    10621 cggaagtagt cgcggatggc gcggatgagc aacgagcttt ccataaagag caggtagggg
    10681 tcgtgatgcg cttttcctgc ttcttcgatt gcctgccaga gttgtttgag gtagttcaaa
    10741 tcccattcca actcttccgc gctgcggccg atgccggcgg tacgcgcgat gatgctcatg
    10801 ccgttcggaa tgtcgagttg cgccatcgcg gctttgagtt cttgacgctc ttcgccttcg
    10861 atacggcggg atacgccgcc gccgcgcgga ttgttcggca tcaataccag atagcgcccg
    10921 gcgaggctga tgaaggtggt cagcgccgcg cctttgttgc cgcgctcgtc tttttcgact
    10981 tggacgatga cttccatgcc ttctttgagc acgtcctgaa tgcgcgcgcg cccgccttcg
    11041 tagccgagga aatacgaacg cgatacttct ttaaacggca aaaagccgtg gcggtcggtt
    11101 ccgtaatcga cgaaacacgc ttccagcgac ggctcgatgc gggtaatgat gcctttgtag
    11161 atattgcctt tgcgctgttc tttgcccagc gtttcgatgt ccaaatccag caggttttgt
    11221 ccgtcgacga tggcaacgcg cagctcttcg gcctgcgttg cgttgaataa cattcttttc
    11281 atgatcacct cgtggacagg cggcattcgg gcgcgccggt ccggttcggc attccgtaag
    11341 gctgggtttc cgatgtcttc ggataaaacc ggtaatcagt ttttgagttg aaaatccgca
    11401 gggatgcacg ttccggggaa ccgtgtgcgg aagggtcgga taaagaaggc tataaagatc
    11461 gatgcggcgg tctgcctgcc gcgttccgaa cgctgcggtc ggaaaaatgg gcgccggctt
    11521 cttcttgtta tcgtgatgcc tgtgttttcg ggcggtttgc gttcggggct tggggctccg
    11581 ctgccgtctt acttccgcgc cgaaacggca aaatcaattc aaacttgact acgttctgcg
    11641 cctgccggct gggaacaggc gcagggaaaa tgctttgcgg agtgcgtttt taatataaaa
    11701 ttccgtttta aagtaaaccg tttcaggggg cgcggcggac gcgctttctg ctgaaacgga
    11761 tgttcggatt atagatgaaa acgcacgaaa taagcaaagg ttcggtcagc ctgatagggg
    11821 ttgccgaaca tgaggcgggt caacgccttg ataactatct gataaaaatc ctcaagggcg
    11881 tgcccaaggg ctatatccac cgcattatcc gcgccggcga ggtgcggttg aacaagaaac
    11941 gctgcaaacc cgacagccgt attgcggagg gagatacggt gcggattccg cctgtgcgcg
    12001 tggcggagaa ggaaatgccg tctgaaaggc gtgccgccgt accggcgcgt gcgtttgagg
    12061 tggtgtatga ggacgacgcg ctactggtgg tcaataagcc ttccggtgtg gcggtacacg
    12121 gtggcagcgg cgtgagtttc ggcgttatcg aacagttgcg ccgcgcccgt ccggaggcga
    12181 agtatttgga gttggtccac cgtttggaca aggatacgag cggcttgttg atggtggcga
    12241 agaaacgcag cgcgctcgtc aaactgcacg aagctatccg taacgaccac cccaaaaaaa
    12301 tctaccttgc gctgggggtg ggcaaactgc cggacgacaa tttccatgtc aaactgcccc
    12361 tgttcaaata taccggcgca caaggcgaaa agatggtacg cgtcagcgag gacgggcagt
    12421 cggcgcatac ggtgttccgt gtgttaagcc gtttctcaga cggcattttg cacggtgtcg
    12481 ggctgtcgca cctgactttg gtgcgggcaa cgctgaaaac gggccgtacg caccaaatcc
    12541 gcgtgcatct gcaatctcaa ggctgtccga ttgcgggcga cgaacgctac ggcgattatc
    12601 aggcgaaccg gcgtttgcag aaattgggtt tgaagcgcat gtttttgcac gcgtccgagc
    12661 tgcacctgaa ccatccgctc acgggtgagc cgctggtgtt gaaggcggag ccgccgccgg
    12721 atttggcgca gtttgcggtg atgttggaaa acgggacgaa aatgtgaacc ccgatgccgt
    12781 ctgaaggctt cagacggcat cggggcgtga aagtatagtg gattaacaaa aatcaggaca
    12841 aggcggcgaa gccgcagaca gtacagatag tacggcaagg cgaggcaacg ccgtaccggt
    12901 ttttgttaat ccactatatg tggggacaga cgaatatggt tgataaaaaa agccctttga
    12961 ttgccgtcag tgtcggcgaa gcgtcgggcg acctgttggg ggcgcacctg atacgcgcca
    13021 tccgaaagcg ttgcccgcag gcacggttaa ccggcatcgg cggggaactg atgaaggcgg
    13081 aaggtttcga gagcctttat gatcaggagc ggctggcggt gcgcggcttt gtcgaagtgg
    13141 tcaggcggct gccggaaatt ttacggatac gcagggagct ggtacgggat ttgctgtcgt
    13201 tgaaacctga tgtctttgtc ggtatcgatg cgcccgattt taatctgggt gtggcggaaa
    13261 agctgaaacg ggcgggcatt ccgaccctgc attatgtcag tccgtcggtt tgggcgtggc
    13321 ggcgcgaacg cgtgggcaaa atcgtgcatc aggtcaaccg cgtgctgtgc ctgttcccga
    13381 tggagccgca gctttatctc gatgcgggcg gacgtgcgga gtttgtcggt catccgatgg
    13441 cacagcttat gcccttggaa gacgaccgtg aaacggcgcg gaaaactttg ggcgcggatg
    13501 tcggcatccc cgtattcgcc ctgctgcccg gcagccgcgt cagcgaaatc gactatatgg
    13561 cgccggtgtt ttttcagacg gcattattgt tgttggaacg ctatcccgcc gcccgcttcc
    13621 tgctgcctgc cgcaacggag gcgacgaagc ggcgtttggc ggaagttttg cagcggccgg
    13681 agtttgccgg attggcgctg acggtaaccg acagacagtc tgaaacggtg tgcagggcgg
    13741 cggatgcggt gctggtaacg agcggtacgg cgactttgga ggtggcgttg tgcaagcgtc
    13801 cgatggtcat cagctacaag atttcgccgc tgacctatgc ttatgtgaaa cgcaaaatca
    13861 aagtgccgca tgtcggcctg ccgaatatcc tgttgggtaa ggaggccgtg ccggaattat
    13921 tgcaatctga agcaaaaccg gaaaaactgg cggcggcatt ggcggactgg tacgaacacc
    13981 ccgataaggt tgccgcgctg caacaggatt tcggggcgtt gcacctgctg ttgaaaaaag
    14041 atacggcgga tttggccgcg cgcgcggttt tggaagaggc gggatgttga gcggttaatg
    14101 gattattttc ccgaagcagc acgtattaca aaaaaagggg gagaaattgt gattaatggc
    14161 acatcaaaca ataagtattt aagaggaatt ccaaatgaaa cagaactggc ccgaatggga
    14221 ttaaggttaa aatataatgg ttc
//
LOCUS       DAWXHA010000059        14156 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.059, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000059 DAWXHA010000000
VERSION     DAWXHA010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14156
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.059"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            253..1128
                     /gene="prpB"
                     /locus_tag="AABD07_001303"
     CDS             253..1128
                     /gene="prpB"
                     /locus_tag="AABD07_001303"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HFB2355831.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVVGCVNAYFARLATQSGFKTIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLMVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLKMYRQFADAVKVPVLANITEFGATPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFDQKLDKLFQK"
     gene            1213..2361
                     /gene="prpC"
                     /locus_tag="AABD07_001304"
     CDS             1213..2361
                     /gene="prpC"
                     /locus_tag="AABD07_001304"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HFB2355832.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSHRGYD
                     ILNLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLETLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPDSEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETVGGHFLHLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSC
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEADIRERIGRKEIVIGFGHPVYTISDP
                     RNVVIKEVARGLSREAGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVPTA
                     MFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            2513..3301
                     /locus_tag="AABD07_001305"
     CDS             2513..3301
                     /locus_tag="AABD07_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HFB2355833.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKSLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPVLLIFVALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIVATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLIDERNPLYQMIVSMF"
     gene            3378..5983
                     /gene="acnD"
                     /locus_tag="AABD07_001306"
                     /pseudo
     CDS             3378..5983
                     /gene="acnD"
                     /locus_tag="AABD07_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285800.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
     gene            6533..7698
                     /gene="prpF"
                     /locus_tag="AABD07_001307"
                     /pseudo
     CDS             6533..7698
                     /gene="prpF"
                     /locus_tag="AABD07_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779825.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
     gene            8010..9209
                     /locus_tag="AABD07_001308"
     CDS             8010..9209
                     /locus_tag="AABD07_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFB2355834.1"
                     /translation="MSDQLILVLNCVSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGRRIAHGGEKYHESVL
                     IDQDVLDELKACIPFAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTGMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAVKN
                     GKSVDTGMGFTPIEGLVMGTRCGDTDPGVYSYPTFHAGMDVAQVDEMLNEKSGFPGIS
                     ELPNDCRTLEIAADEGREGARLALEVMTCRLAKYIASMAVACGSVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            9320..9940
                     /locus_tag="AABD07_001309"
     CDS             9320..9940
                     /locus_tag="AABD07_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HFB2355835.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIINQGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKDAPARALHPKRKTIGLRIPDNAVAQALLEELGGPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTDPTTVIDMTDGTELVRRGFGDTAVFGL"
     gene            complement(10102..10545)
                     /locus_tag="AABD07_001310"
     CDS             complement(10102..10545)
                     /locus_tag="AABD07_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HFB2355836.1"
                     /translation="MYLTQHTDYGLRVLIYTAVNDDALVNIATIASTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPERINIGAVVRHLEPMQLVECMGPNNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYESKIPIAVR"
     gene            10719..11087
                     /locus_tag="AABD07_001311"
     CDS             10719..11087
                     /locus_tag="AABD07_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFB2355837.1"
                     /translation="MKPLKRHSALVGLSREHHHSLSLCVRMLRTPGADHRAELELHFA
                     ELETHFREEEAKFAPIWQNVAPELKTRFEGDHAKLRQMMASPECGNAAWNTAFATTLR
                     DHARFEERELFPAVEPFLPA"
     gene            11132..12286
                     /locus_tag="AABD07_001312"
     CDS             11132..12286
                     /locus_tag="AABD07_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS protein"
                     /protein_id="HFB2355838.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTAFWLAARIAAFIPGWG
                     AAASGILGTLFFWYGAVCMALPVIRSQNRRNYVAVFAIFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGMRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAIL
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNSIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(12344..13216)
                     /locus_tag="AABD07_001313"
     CDS             complement(12344..13216)
                     /locus_tag="AABD07_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HFB2355839.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVINRASVVIDADSIGGADLVLIATPVATVPAVLTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRNGAQAAQFGLFRHRKLIITPHGGEDSDGI
                     ALVENLWRAVGADIFTMDAQHHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLADILTADDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            13301..14113
                     /locus_tag="AABD07_001314"
     CDS             13301..14113
                     /locus_tag="AABD07_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HFB2355840.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTGKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGCDGVRTGLYHKMHLFGFSGLGERYAEADTIRAGREVPHLSAEGMPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGIVTADIDANRLNSVRNRLPALKHRVLDAV"
BASE COUNT         3182 a         3862 c         3974 g         3138 t
ORIGIN      
        1 ttactatgaa accaattcag atgtttttcc cttttctgaa taatcccctt gttttcttct
       61 tgtctgcggt tttgccgcat aattccgaac ggtctgctgt ttttctttga ttcgttttaa
      121 atatcaataa gataattttt cccatatatt tttaatgatt gggatgcccg acgcgtcgga
      181 tggctgtgtt ttgccgtccg aatgtgatgg aagcctgtcc atactgaaaa aagtctataa
      241 aggagaaata tgatgagtca acactctgcc ggagcacgtt tccgccaagc tgtgaaagaa
      301 tcgaatccgc ttgccgtcgt cggttgcgtc aatgcttact ttgcacgatt ggccacccaa
      361 agcggtttca aaaccatcta tctgtccggc ggcggcgtgg cagcctgttc ttgcggtatc
      421 cctgatttgg gcattaccac aatggaagat gtgctgatcg acgcacgacg cattacggac
      481 aacgtggata cgcctctgat ggtggacatc gatgtgggtt ggggcggtgc attcaatatt
      541 gcccgtacca ttcgcaactt tgaacgcgcc ggtgttgcag cggttcacat cgaagatcag
      601 gtagcgcaaa aacgctgcgg ccaccgtccg aacaaagcca tcgtttccaa agatgaaatg
      661 gtcgaccgca tcaaagctgc cgtagatgcg cgcgttgatg agaacttcgt gattatggcg
      721 cgtaccgatg cgctggcggt agaaggtttg gatgccgcta tcgaacgcgc tcaggcttgt
      781 gtcgaagccg gtgcggacat gattttccct gaagccatga ccgatttgaa aatgtaccgt
      841 caatttgcag atgcagtgaa agtaccagta ttggccaaca ttaccgagtt tggtgctaca
      901 ccgctttata cgcaaagcga gttggctgaa aacggcgtgt cactggtgct gtatccgttg
      961 tcatcattcc gcgcagcaag caaagccgct ttgaatgttt acgaagcgat tatgcgcgat
     1021 ggcactcagg cggcggtggt ggacagtatg caaacccgtg ccgagctgta cgagcatctg
     1081 aactatcatg ccttcgatca aaaactggat aaattgtttc aaaaatgatt taccgctttc
     1141 agacggcctt tcaacaaatc cgcatcgacc gtctgaaaaa taaaacccat aaaaatacaa
     1201 aggagaaata ccatgactga aactactcaa accccgacct tcaaacctaa aaaatccgtt
     1261 gcgctttcag gtgttgcggc cggtaatacc gctttgtgta ccgttggccg taccggtaac
     1321 gatttgagcc atcgcggtta cgacattcta aatttggcac aaaaatgcga gtttgaagaa
     1381 gtcgcacact tgctgattca cggccatctg cccaacaaat tcgagctggc cgcttataaa
     1441 accaagctca aatccatgcg cggcctgcct atccgtgtga ttaaagtttt ggaaaccctg
     1501 cctgcacata cccatccgat ggacgtgatg cgtaccggcg tatccatgct gggctgcgtt
     1561 catcccgaac gcgaaagcca tcccgacagc gaagcgcgcg acatcgccga caaactgatc
     1621 gccagcctcg gcagcatcct gctctactgg tatcaatatt cgcacaacgg caaacgtatt
     1681 gaagttgaaa gcgacgaaga gaccgtcggc ggtcatttcc tgcacctgtt gcacggcaaa
     1741 cgcccaagcg aatcacacat caaagccatg catgtttcac tgattctgta tgccgaacac
     1801 gagttcaacg cctccacttt tactgcccgc gtgattgccg gtacgggttc ggatatgtat
     1861 tcctgcatca ccggcgccat cggcgcgctt aaaggtccga aacacggcgg tgcgaacgaa
     1921 gtcgcctacg acatccaaaa acgctaccgc aacgccgacg aagccgacat ccgcgaacgc
     1981 atcggccgca aagaaatcgt gatcggtttc ggccatccgg tttacaccat ttccgacccg
     2041 cgcaacgtcg tgattaaaga agtggcgcgc ggtttgagcc gggaagcggg cgacatgcgc
     2101 ctcttcgaca tcgccgaacg cttggagagc gtgatgtggg aagagaaaaa aatgttcccg
     2161 aatctggact ggttctctgc cgtttcctac caaaaattgg gcgtaccgac cgctatgttc
     2221 acaccgctgt tcgtgatttc ccgtacaacc ggttggagcg cacacgtcct cgaacagcgc
     2281 aaagacggca aaatcatccg tccgagcgca aactacaccg gccctgaaga tttggcgttt
     2341 gtggagattg aagaacgata attgaagaat gcaatagcag tttgttcttt atttcggtat
     2401 gcaaagctga ggatttcaga cgaccttgcc ttattggaaa ggttgtctga aataagttta
     2461 atctaatagg agaagataat cctgtattgg cgcaagtaac aggataagaa acatggaaga
     2521 tttatacata atactcgctt tgggtttggt tgcgatgatc gccggattta tcgatgcgat
     2581 tgcgggcggg ggtggtttga ttacgctgcc tgcactcttg ttggcaggta ttcctcccgt
     2641 gtcggcaatt gccaccaaca agctgcaagc agccgctgct acgttttcgg ctacggtttc
     2701 ttttgcacgc aaaggtttga ttgattggaa gaaaagtctc ccgattgccg cagcatcgtt
     2761 tgcaggcggc gtggtcggtg cattatcggt cagcttggtt tccaaagata ttttgctggc
     2821 ggtcgtgccg gttttgttga tatttgtcgc gctgtatttt gtgttttcgc ccaagctcga
     2881 cggcagtaag gaaggcaaag ccagaatgtc tttttttcta ttcgggctga cggttgcacc
     2941 gcttttgggt ttttacgacg gtgtgttcgg accgggtgtc ggctcgtttt ttctgattgc
     3001 ctttattgtt ttgctcggct gcaagctgtt gaacgcgatg tcttacacca aattggcgaa
     3061 cgttgcttgc aatcttggtt cgctatcggt attcctgctg cacggttcga ttattttccc
     3121 gattgtggca acgatggcgg tcggtgcgtt tgtcggtgcg aatttaggtg cgagatttgc
     3181 cgtccgcttc ggttcgaagc tgattaagcc gctgctgatt gtcatcagca tttcgatggc
     3241 tgtgaaattg ttgatagacg agagaaatcc gctgtatcag atgattgttt cgatgtttta
     3301 aaccctttca gacgactcct tcaaaacatc ggctgaaacc caaaccacaa gaaaaataga
     3361 tccacaggag aaccgacatg actgccaacc aaagttaccg caaaccgctg cccggtacgg
     3421 atttggaata ctacgacgcg cgtgcggcgt gtgaggacat caaacccggc tcttacgaca
     3481 agctgccgta cacgagccgc attttgtctg agaacttggt caaccgcgcg gacaaagtcg
     3541 atttgccgat gctgcaaagc tggctgggcc agttgataga agggaagcag gaaatcgatt
     3601 ttccgtggta tcccgcgcgg gtggtgtgcc acgatattct ggggcagacc gcgctggtgg
     3661 atttggcagg cttgcgcgat gcgattgccg aaaaaggcgg cgatcctgcc aaagtgaatc
     3721 cggtggtgca gacgcagctt atcgtcgacc actctttggc ggtggagtgc ggcggttacg
     3781 atcctgatgc cttccgcaaa aaccgcgaaa tcgaagacag acgtaacgaa gaccgtttcc
     3841 acttcatcaa ctggacaaaa accgcatttg aaaatgtgga cgtgattccg gcgggcaacg
     3901 gcatcatgca ccaaatcaat ctggaaaaaa tgtcgcccgt cgtccaagtc aaaaacggcg
     3961 tggctttccc cgatacctgc gtcggcacgg actcgcatac gccgcacgtt gatgcgctgg
     4021 gcgtgatttc cgtggcgtgg gcggtttgga agcggaaacc gtgatgctgg gacgcgcgtc
     4081 catgatgcgc ctgcccgata ttgtcggcgt ggagctgacg ggcaaacggc aggcgggcat
     4141 tactgccaca gacatcgtgt tggcactcac cgaattcttg cgtaaagagc gcgtggtcgg
     4201 ggcgtttgtc gaatttttcg gcgagggcgc gagaagcctg tctatcggcg accgcgcgac
     4261 catttccaac atgacgccgg agttcggcgc gactgccgcc atgttcgcca tcgacgcgca
     4321 aactattgat tatttgaaac tgaccggacg tgacgacgcg caggtgaaat tggtggaaac
     4381 ctacgccaaa accgcaggct tatgggcagg tggcttgaaa accgccgttt atccgcgcgt
     4441 tttgaaattt gatttgagca gcgtaacgcg caatatggca ggcccgagca acccgcacgc
     4501 gcgttttgcc accgccgatt tggcggcgaa agggctggcg aagccttacg aagagccttc
     4561 agacggccaa atgcctgacg gtgcagtgat tattgccgcg attacttcgt gtaccaatac
     4621 ttccaacccg cgcaacgttg tcgccgccgc actgttggca cgcaatgcca accgcctcgg
     4681 cttgaaacgc aaaccttggg tgaaatcttc gtttgccccg ggttcaaaag tagccggaat
     4741 ctatttgaaa gaagcaggct tgttgcccga aatggaaaaa ctcggcttcg gtatcgtcgc
     4801 cttcgcatgt accacctgta acggcatgag cggcgcgctc gacccgaaaa tccaacaaga
     4861 aatcatcgac cgcgatttgt acgccaccgc cgtattgtca ggcaaccgca acttcgacgg
     4921 ccgtatccat ccgtatgcga aacaggcttt cctcgcttcg cctcctttgg tcgttgccta
     4981 cgcattggca ggtagcatcc gtttcgatat tgaaaacgac gtactcggcg ttgcagacgg
     5041 ccgcgaaatc cgcctgaaag atatctggcc gacagacgaa gaaatcgatg ccatggttgc
     5101 cgaatatgtg aaaccgcaac aattccgcga catttatatc ccgatgtccg acaccggcac
     5161 agcgcaaaaa gcaccaagcc cgctgtacga ctggcgaccg atgtccacct acatccgccg
     5221 tccgccctat tgggaaggcg cactggcagg ggaacgtaca ttaagaggta tgcgtccgcc
     5281 ggcgattttg cccgacaaca tcaccaccga ccacatctcg ccatccaatg cgattttggc
     5341 cggcagtgcc gcaggcgaat atttggcgaa aatgggtttg cctgaagaag acttcaactc
     5401 ttacgcaacc caccgcggcg accacttgac cgcccaacgc gcaaccttcg ccaatccgaa
     5461 actgtttaac gaaatggtga gaaacgaaga cggcagcgta cgccaaggtt cgttggcacg
     5521 cgttgaacca gaaggccaaa ccatgcgcat gtgggaagcc atcgaaacct atatgaaccg
     5581 caaacagccg cttatcatca ttgccggtgc ggactatggt caaggctcaa gccgcgaccg
     5641 ggcggcgaag ggcgtgcggc tggcgggtgt ggaagccatc gccgccgaag gtttcgagcg
     5701 catccaccgc accaacctca tcggcatggg cgtcttgccg ctgcaattca aacccggcac
     5761 caaccgccat accctgcaac tggacggtac ggaaacctac gacgttgtcg gcgaacgcac
     5821 accgcgctgc ggcctgaccc tcgtgattca ccgtaaaaac ggagaaaccg tcgaagttcc
     5881 ggttacctgc cgccccgata ctgcagaaga agtattggta tatgaagccg gcggcgtgtt
     5941 gcaacggttt gcacaggact ttttggaagg gaacgcggct tagagttcgt ctgaaaagca
     6001 agacgtagcg tgggtcgggt tctcattcac gtaattcccg atatggcagg catttactgt
     6061 aaatcgtcat tcccgcgcag gcgggaatcc agaaagtgga attgaggaaa cctttttatc
     6121 cgatgagttt ctgtgcggat aaatctggat ttccgcctac gcgggaatga cggggtttaa
     6181 taatctaccg tatcacaaca cagcagccgt agattggggc gaaccccgac agtttgcgga
     6241 atcaaacggc tttggtcgga gtggtagcct aatgtacttc tggaaagtgg gtgtagcgtg
     6301 ggctttgccc acgaaataaa ggctgaattg acatggtata gcggattaac aaagatcagg
     6361 acaaggcggc gggccgcagg cagtacaaat ggtacggaac cggttcgccc ggtgcttggg
     6421 cgccttaggg aatcgttccc tttgagccgg ggcggggcaa cccgtaccgg tttaaattaa
     6481 tccactataa aaatcgtggg cagagcccac gctacataag gagaacccta aaatgccgca
     6541 aatcaaaatc cccgccgttt actaccgcgg cggtacatct aaaggcattt tcttcaaacg
     6601 caccgatctg ccggcagctg cgcaggaagc aggcggggca cgcgacaaaa tcctcttgcg
     6661 cgtactcggc agccccgacc cttacggcaa acagattgac ggtttgggca acgccagttc
     6721 gtccaccagc aaagctgtga tttcggacaa atccgaacgc gccgatcacg atgtcgatta
     6781 cttgttcgga caagtttcca tcgacaaacc atttgtcgat tggagcggca actgcggcaa
     6841 ccttaccgcc gccgtgggca cattcgccat cgaacagggc ttggtcgata aatccaaaat
     6901 cccttcagac ggcatctgca cggtcaaaat ctggcagaaa aacatcggca aaaccattat
     6961 tgcccatgtg ccgatgcaaa acggagcagt gttggaaaca ggcgatttcg agcttgacgg
     7021 cgtaattttc cggcagccga agtacaaatc gaatttttag atccagccga cggcgaaggc
     7081 agtatgttcc caaccggcaa tttggtcgac gaaattgatg tgccgaatat aggtcgtctg
     7141 aaagccacgc tcatcaacgc gggcattccg accgttttcc tgaacgccgc cgacttgggc
     7201 tacacgggca aagagttgca ggacgacatc aacaacgatg ccgccgcgct ggaaaaattt
     7261 gaaaccatcc gcgcatatgg cgcgctgaaa atgggtttga tcagcgacgt atccgaagcc
     7321 gccgcccgcg cgcgcacgcc gaaacccgcc ttcgtcgcgc ccgccgccga ttacaccgcc
     7381 tccagcggca aaaccgtaaa cgccgccgac atcgatttgc cggtacgcgc cctgagcatg
     7441 ggcaaactgc accacgctat gatgggcatc gcctcggtcg ccatcgccgc cgccgccgtg
     7501 ctcggtacgc tggtcaacct tgccgcaggc ggcggaacgc gtaaagaagt gcgcttcggg
     7561 catccgtcag gtacgctgcg tgtcggtgct gccgccgaat gtcaggacgg acaatggacg
     7621 gccgccaaag cggtcatgag ccgcagcgca cgcgtgatta tggaaggttg ggtgcgcgtt
     7681 cccgatgatt gtttttgaaa tcatgtagga cgcacattgc tgtccgctgt ttcagacggc
     7741 atttgattaa ggattaccat aaagccgaat aacctcaccg ccgtcattcc cacgcaggcg
     7801 ggaatccgca gccgatattc tgtttcctga tttttatcag agcctgcgtg tgagcaaata
     7861 tggattcccg cctgcgtggg aatgacgcta ggaaatacgg catacgcttt gcccaaagag
     7921 gccgtctgaa acacactccg cccaacgccc atcctttttc agacggcccc gcaccaaaaa
     7981 aacaaccaca aactacaagg agaaacatca tgtccgacca actcattctt gtcctgaact
     8041 gcgtcagttc atcgctcaaa ggcgccgtta tcgaccgcaa aagcggcagc gtcgtcctaa
     8101 gctgcctcgg ggaacgcctg actacgcccg aagccgtcat taccttcaac aaagacggca
     8161 acaaacgcca agttcccctg agcggccgca actgccacgc cggcgcggtg ggtatgctgt
     8221 tgaacgaact ggaaaaacac ggactgcacg accgcatcaa agccatcggc cgccgcatcg
     8281 cccacggcgg cgaaaaatat cacgagtccg tcctcatcga ccaagacgtc cttgacgaac
     8341 tgaaagcctg catcccgttc gccccgctgc acaaccccgc caacattagc ggcatcctcg
     8401 ccgcgcagga acactttccc ggcctgccca acgtcggcgt gatggacacc tcgttccacc
     8461 aaaccatgcc ggagcgggcc tacacttatg ccgtgccgcg cgaattgcgc aaaaaatacg
     8521 ccttccgccg ctacggtttc cacggtaccg gtatgcgtta cgtcgcccct gaagccgcac
     8581 gcatcttggg caaacctctg gaagacatcc gcatgattat tgcccactta ggcaacggcg
     8641 catctattac cgccgtcaaa aacggcaaat ccgtcgatac cggtatgggt ttcacgccga
     8701 tcgaaggttt ggtaatgggt acacgttgcg gcgacaccga tccgggcgta tacagctatc
     8761 cgactttcca cgcagggatg gatgttgccc aagttgatga aatgctgaac gaaaaatcag
     8821 gtttccccgg tatttccgaa cttcccaacg actgccgcac cctcgaaatc gccgccgacg
     8881 aaggccgcga aggcgcgcgc ctcgccctcg aagtcatgac ctgccgcctc gccaaataca
     8941 tcgcttcgat ggctgtggcc tgcggcagtg ttgacgcact cgtgttcacc ggcggtatcg
     9001 gcgaaaactc gcgtaatatc cgtgccaaaa ccgtttccta tcttgatttc ttgggtttgc
     9061 acatcgacac caaagccaat atggaaaaac gctacggcaa ttcgggcatt atcagcccga
     9121 ccgattcttc tccggctgtt ttggtcgtcc cgaccaatga agaactgatg attgcctgcg
     9181 acactgccga acttgccggc atcttgtagc caaaaaaggg ggcgagtccg caaaaatgcc
     9241 gtctgaaagg ttttcagacg gcattttgtt tggcgtttgg gcgtacaata cggaaaacat
     9301 gacgataagg aaacaaacta tggcacaatt tttcgccgtt catcccgaca atccccaaga
     9361 acgcctcatc aagcaggcag tcgaaatcat caatcaaggc ggcgtggtgg tttatccgac
     9421 cgattcctgt tacgccttgg gttgcaaact cggcgataag gcggcgatgg aacgcatact
     9481 ctccatccga aaaatcgatt tgaaacacca cctgaccctg atgtgcgccg atttgagcga
     9541 gttgggcaca tacgccaaaa tcgacaacgt acagtttcgt cagcttaaag ccgccacgcc
     9601 cgggccttat acctttatct tgcaggcgac gaaggatgcg ccggcgcgcg ccctgcaccc
     9661 gaaacgcaaa accatcgggc tgcgtattcc cgataatgcc gttgcacaag ccctgctgga
     9721 ggagttgggc gggccgcttt taagctgcac cctgatgctg cccgaagacg gcgaaccatt
     9781 gaccgaccct tatgaaatcc gcgagcgttt ggaacacgcc gtcgatttgg taattgacgg
     9841 cggctggtgc ggaaccgatc cgactaccgt catcgacatg accgacggca cggaactggt
     9901 gcgccggggt ttcggcgata cggcggtgtt cggtttgtag ggaaaccgat gccgtctgaa
     9961 gcatcagccg ttcagacggc atcgcgcgcc ttgccggcgg cagcccgaaa tgccggcgcg
    10021 tatcgcgccc ggtcggaata tccgtttgaa acggcaaaca aaatgccgtc cgaacgcggg
    10081 tttgggcggc attttgatgc gttatcgcac cgcaatcggg attttcgatt cataaagcag
    10141 gtcgtaggtc ggcttgttga gcaggtcttg cagcgtgaaa ccgtccagat acgtgaaaaa
    10201 cgacttcatt gcaccgccga gtatgcccgt cagccggcag gacggcgtaa tcaggcattc
    10261 gttgttcggg cccatacact cgaccagctg catcggttcg aggtggcgga cgaccgcgcc
    10321 gatattgatg cgttcgggcg gcgcggccag cctcagcccg ccgcctttcc cgcgtacgct
    10381 gtgcaagaac ccgcctttga ccagcgcggt aaccactttc atcaaatggc ttttggaaat
    10441 gccgtaggtc gaggcgatgg tggcgatatt gaccagcgcg tcgtcgttga cggcggtgta
    10501 gatgaggacg cgcagcccgt agtcggtatg ttgggtcaga tacatgattt tctcggtatg
    10561 gatcgttatt cttatcggta cggtttaagt ttcacggaaa ataccttaat ggttgaaacc
    10621 ctgtccgtcg gggcggtaga atgtagcctg tctgcggcgg tatgccgtct gaaacatccg
    10681 cgctaccgtt tgataatttg ttattgtaac ctaaatttat gaaaccgttg aaacgacatt
    10741 ccgcccttgt cgggctttcg cgcgaacacc accactcgct ttccctgtgc gtgcgtatgt
    10801 tgcggacgcc cggggcagac catcgtgccg aactcgagct gcattttgcc gaactggaaa
    10861 cccattttcg cgaagaagaa gccaagtttg ccccaatttg gcagaatgtc gcgcctgagt
    10921 tgaaaacccg ttttgaaggc gatcacgcca aactgcggca gatgatggca agccccgaat
    10981 gcggtaacgc ggcgtggaat accgcttttg ccacaaccct gcgcgaccac gcgcgctttg
    11041 aagaacgcga gctgtttccc gccgtcgaac cgtttttgcc ggcatgattc cgttttgcgg
    11101 caaatatatt aatgataaac aaggaacaca catgaaattt accaaacatc ccgtctgggc
    11161 aatggcgttc cgcccgtttt attcactggc ggcactgtac ggcgcattgt ccgtattgct
    11221 gtggggtttc ggctacacgg gaacgcacga gctgtccggt ttctattggc acgcgcatga
    11281 gatgatttgg ggttatgccg gtctcgtcgt catcgccttc ctgctgaccg ccgtcgccac
    11341 ttggacggga cagccgccca cgaggggcgg cgttctggtc ggcttgaccg ccttttggct
    11401 ggctgcgcgg attgccgcct ttatcccggg ttggggtgcg gcggcaagcg gcatactcgg
    11461 tacgctgttt ttctggtacg gcgcggtgtg catggctttg cccgttatcc gttcgcaaaa
    11521 ccggcgcaac tatgtcgccg tattcgcaat atttgtgctg ggcggtacgc atgcggcgtt
    11581 ccacgtccag ctgcacaacg gcaacctagg cggactcttg agcggattgc agtcgggcct
    11641 ggttatggtg tcgggcttta tcggcctgat tgggatgagg attatttcgt tttttacgtc
    11701 caaacggttg aacgtgccgc agattcccag tccgaaatgg gtggcgcagg cttcgctgtg
    11761 gctacccatg ctgaccgcca tactgatggc gcacggcgtg atgccttggc tgtcggcggc
    11821 tttcgcgttt gcggcgggcg tgatttttac cgtacaggtg taccgctggt ggtataaacc
    11881 cgtattgaaa gaaccgatgc tgtggattct gtttgccggc tatctgttta ccggattggg
    11941 gctgattgcg gtcggcgcgt cttatttcaa acctgccttc ctcaatctgg gcgtacatct
    12001 gatcggggtc ggcggtatcg gcgtgctgac tttgggcatg atggcgcgta ccgcgctcgg
    12061 tcatacgggc aattcgattt atccgccgcc caaagccgtt cccgttgcgt tttggctgat
    12121 gatggcggca accgccgtcc gtatggttgc cgtattttct tccggcactg cctacacgca
    12181 cagcatccgc acgtcttcgg ttttgtttgc actcgcgctg ctggtgtatg cgtggaaata
    12241 cattccgtgg ctgatccgtc cgcgttcgga cggcaggccc ggttgagtaa aaccgccgca
    12301 gatttcgggt ctgcggcggt ttgcttttca gacggcatgg cggtcagttg ccgtccagcc
    12361 agcggtcgcg cgtggttttg gcttcttcaa aatagcggta cagggcttcg cggtcgtcgg
    12421 cggtcaggat gtctgccaaa acgtccaact gtttgcccaa gccttgaacc agttgcagca
    12481 ggctgtcttt gttggcaagg cagatgtccg cccacacggc gggatggccg gaggcgatgc
    12541 gggtgaagtc ccgaaagccc gtggcggcga atttcagata ttcctgtccg tcggggtggt
    12601 cgagaatctg gtggacatag gcgaaggcgg tcaggtgggg catatgggag acggcggcga
    12661 aaaccgcgtc gtggtgttgc gcgtccatcg tgaaaatgtc cgcaccgacc gcgcgccaca
    12721 ggttttctac caatgcgatg ccgtctgaat cttcgccgcc gtggggcgtg atgatgagtt
    12781 ttctgtggcg gaacagcccg aactgcgcgg cttgcgcacc gtttctgtcc gaaccggcaa
    12841 tcgggtgtgc ggcgatgcag cggtgcaggc ggtcgggcag gcagcggcgg aaggcttcga
    12901 tgaccgaaga tttggtgctg ccgacatcgg aaatccaagt gtgttccggc aaaacggggc
    12961 gcagcgcggt taaaacggcg ggaacggtgg cgacgggcgt ggcaatcagt accaagtccg
    13021 caccgccgat gctgtccgcg tcgatgacga cggaagcccg gttaatcacg ccgcgttcca
    13081 atgcacgttc gaggttgtcg cggtcggtgt cgataccggt aacggtgcgg acgagtccct
    13141 gccttttgag gtcgagaacg aacgaaccgc cgatcagccc tacaccgatg agggcaatat
    13201 ggttcaaaat gggcatttgt gtaaacggtt ttcgcaaagt gccgccatgg tagcctatcg
    13261 gcggaatatg ccgcaaggtc ggcaggaaaa aggagaagaa atggacaaaa tcagagttgc
    13321 cgccgtgcag atggtgtcgg gcgtgtcgcc ggaaaccaac gtcgccgcca tgaaacgcct
    13381 ggtcgcacgg gcggcggagc agggtgcgga ttgggtgctg ctgcccgaat attgggtgct
    13441 gatgggcgca aacgataccg gcaaactcgc acttgccgag cctttgggcg gcggacgctt
    13501 tcagacggca ttgagcgaaa cggcgaaaga atgcggcgtg gtgctgttcg gcggaaccgt
    13561 gccgctgcaa agccccgaag cgggcaaggt catgaatact ttattggtgt acgggtgcga
    13621 cggcgtaagg acggggctgt accacaaaat gcacctcttc ggtttttccg gtttgggcga
    13681 acgctatgcc gaagccgata ccatccgcgc agggcgggaa gtgccgcact tgtcggcaga
    13741 aggcatgccg gtggcggcag gtatttgtta cgatgtccgc tttcccgaat ttttccgccg
    13801 ccaactgccg tttgacgtat tgatgctgcc ggcggcattt acccatacga cgggcaaggc
    13861 gcactgggag ctgctgctgc gcgcgcgtgc cgtcgaaaac caatgttacg tcgtggcggc
    13921 ggcacagggc ggtttgcacg aaaacggacg gcgcacgttc ggacacagta tgattgtcga
    13981 tccgtggggc gacgtgttgg acgtattacc cgaaggcgaa ggcatcgtta cggcagacat
    14041 cgatgccaac cgcctgaaca gcgtccgcaa ccgcctgccc gccttgaaac accgggtttt
    14101 ggatgccgtc tgaaagttca gacggcatcg gtgtcgggga atcagcgggc cgtagc
//
LOCUS       DAWXHA010000060        14106 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.060, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000060 DAWXHA010000000
VERSION     DAWXHA010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14106
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.060"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            7..516
                     /locus_tag="AABD07_001315"
     CDS             7..516
                     /locus_tag="AABD07_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HFB2355841.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTV
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
     gene            complement(748..1329)
                     /locus_tag="AABD07_001316"
     CDS             complement(748..1329)
                     /locus_tag="AABD07_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019957326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HFB2355842.1"
                     /translation="MEHKLPQLPYGPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPAGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLALVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKRFAA"
     gene            1492..2898
                     /gene="dnaB"
                     /locus_tag="AABD07_001317"
     CDS             1492..2898
                     /gene="dnaB"
                     /locus_tag="AABD07_001317"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HFB2355843.1"
                     /translation="MNDYAAMPPEGREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINEGRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGRLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEYVAIEKHLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     IIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVEQRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYVPEEAKIED"
     gene            3206..3871
                     /locus_tag="AABD07_001318"
     CDS             3206..3871
                     /locus_tag="AABD07_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HFB2355844.1"
                     /translation="MCTRKQQGFTLTELLIVMAIAAIMATIALPNMSGWIASRRIASH
                     AEQIANLLRFSRGEAVRLNLPVYICPAQVKKDGTVDNQCDFGKKEQGMLAFGDKNDNK
                     AYDGDAADVFLRNVVLNDDIKDKRINYTFNHIAFGSSQPTADRVVWTFNQNGTFGYTK
                     DQHLASTSSFFYSDGYIQIVLTDARAVSDADRKFRSAVVLIDSSGRVEVCRKNDTRAV
                     CKH"
     gene            3903..4511
                     /gene="pilV"
                     /locus_tag="AABD07_001319"
     CDS             3903..4511
                     /gene="pilV"
                     /locus_tag="AABD07_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HFB2355845.1"
                     /translation="MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMRNSIPSAVDGDFKVDAV
                     KSKVQLADEQLKRFGYELKNALPDAVAIHYAVCKDSSGKAPALSGDAFSSNCDNKENG
                     DTLIKVLWVNDSAGDSDISRTNLEVSGGNIVYTYQARVGGRE"
     gene            4508..5452
                     /locus_tag="AABD07_001320"
     CDS             4508..5452
                     /locus_tag="AABD07_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HFB2355846.1"
                     /translation="MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHIEQDVVSDVTQKNPP
                     FSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASAATTVVSSCG
                     AISKPSKQILTLEDAKKELEILNQDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQL
                     DDKGKWGNPQLLAKKVKRMDVRYIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEV
                     LLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL"
     gene            5431..6042
                     /locus_tag="AABD07_001321"
     CDS             5431..6042
                     /locus_tag="AABD07_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HFB2355847.1"
                     /translation="MRKQNTLTGIPTSDGQRGSALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGEFQVLDLEYTADSKVTFSENCEKGLCTAVNVRT
                     NNNGNEEVFGNIVVQGTPTVEAVKRSCPAKSGKNSTGLCIDNQGVEYEKGTGNVSKMP
                     RYIIEYLGEKNNQNIYRVTAKAWGKNANTVVVLQSYVGNNDEQ"
     gene            6029..6517
                     /locus_tag="AABD07_001322"
     CDS             6029..6517
                     /locus_tag="AABD07_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HFB2355848.1"
                     /translation="MMSNKMEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQS
                     QLYTEMVGINNVLKQFILKNPQDDNDILKSKLEIFVSGYKMNPKIAKKYSVSVRFVDA
                     EKPRAYRLVGVPNAGTGYTLSVWMNSVGDGYKCRDATSAQVYLETLSANTGCEAFSNR
                     KK"
     gene            complement(6587..6895)
                     /locus_tag="AABD07_001323"
     CDS             complement(6587..6895)
                     /locus_tag="AABD07_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD family protein"
                     /protein_id="HFB2355849.1"
                     /translation="MKDLLSSPSFLLFSCMLAVTCPTRLIGFFALRNRTLSRRAQTVM
                     EAAPGCVLISVIAPYFVSDKPHELIAIALTAFAACRFSMLFTVLIGVGSSGISGWLMA
                     "
     gene            complement(6892..7599)
                     /locus_tag="AABD07_001324"
                     /pseudo
     CDS             complement(6892..7599)
                     /locus_tag="AABD07_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478510.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
     gene            7765..8217
                     /gene="dut"
                     /locus_tag="AABD07_001325"
     CDS             7765..8217
                     /gene="dut"
                     /locus_tag="AABD07_001325"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HFB2355850.1"
                     /translation="MNIEVEMKVLDERMADFIPAYATEGSAGLDLRACLDEEVVLQPG
                     GTLLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     GSEPFAVKPFERIAQMVVVPVVQARFKRVEEFVGSSRGEGGFGSTGFH"
     gene            8293..9480
                     /gene="dapC"
                     /locus_tag="AABD07_001326"
     CDS             8293..9480
                     /gene="dapC"
                     /locus_tag="AABD07_001326"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HFB2355851.1"
                     /translation="MNTLLKQLKPYPFARLREAMQGISAPEGMEAVPLHIGEPKHPTP
                     KVITDALTASLRELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLNPVSDGLKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWERTKLVFVCSPNNPSGSVPDLDGWREVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQSGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWNDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            9791..10570
                     /gene="yaaA"
                     /locus_tag="AABD07_001327"
     CDS             9791..10570
                     /gene="yaaA"
                     /locus_tag="AABD07_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HFB2355852.1"
                     /translation="MFFVLSPAKNLNEKDPCPVSEFTQPDLLAESEILMRQLRELAPQ
                     QIAELMHVSDKIALLNAERNAAWHTPFTPENAKQAVFMFNGDVYEGMDANTLNTDQIQ
                     YLQGHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGGIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNVKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHNITDPEMLKNFNYEGYAFNDAASNENEWVFMRSEQIK"
     gene            10653..10743
                     /locus_tag="AABD07_001328"
     tRNA            10653..10743
                     /locus_tag="AABD07_001328"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10687..10689,aa:Ser,seq:tga)
     gene            10820..10906
                     /locus_tag="AABD07_001329"
     tRNA            10820..10906
                     /locus_tag="AABD07_001329"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10854..10856,aa:Ser,seq:cga)
     gene            11100..12292
                     /locus_tag="AABD07_001330"
                     /pseudo
     CDS             11100..12292
                     /locus_tag="AABD07_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
     gene            complement(12648..12917)
                     /locus_tag="AABD07_001331"
     CDS             complement(12648..12917)
                     /locus_tag="AABD07_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355853.1"
                     /translation="MESSDVQGRMETLAFATAPKKGGIRKSGFGRVILIKSGHIVIHN
                     ADGDSFATGYGVIAADIVSPDLKTDFDIFFPPESLLRYKKIGKKK"
     gene            complement(13112..13795)
                     /locus_tag="AABD07_001332"
     CDS             complement(13112..13795)
                     /locus_tag="AABD07_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HFB2355854.1"
                     /translation="MDKEKVLDKIKKCLALGRSANEHEAAQALRQAQALMEKYKVNAE
                     DIALSKVSEQKADRKMAFKLAGWQWGVANMIADIFGCKSYQRGKTMMFYGIGNRAETS
                     AYAFDVVYRQISADRRKFLKTCRAGKPSHRTYLADRFCGGWIASAWETVKKFEMSDEE
                     KAIMDGYKKKEYPDMAEARTRDAKSSILQGSKMEYEALTRGMESGKQVKLHYAVNGTG
                     FVKQIGGQT"
     gene            complement(13806..14106)
                     /locus_tag="AABD07_001333"
                     /pseudo
     CDS             complement(13806..14106)
                     /locus_tag="AABD07_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698190.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         3535 a         3172 c         3687 g         3712 t
ORIGIN      
        1 acatcaatga caatgatttt aagcatttta agcctgtttt ttatcattag actgttattt
       61 ttagccgtct ccattaaaca tgaaaaagcc ttgattgcca aaggggcgaa acaatacgga
      121 aaaaccaatt ccacggtgct tgcggcagtt catacgcttt attatttggc gtgttttgtt
      181 tgggtatggc tttctgacac tgcttttaat ggcatatcct tgattggtac actgacggtg
      241 atggcttcat ttgtgatatt atcattgatt attaagcagt tgggggagat ttggacggtt
      301 aaaatctata ttttgccaaa tcatcaaatt aatcgttcgt ggttgtttaa aacattccgc
      361 cacccgaatt attttttaaa catcataccc gaactgattg gcatcgcctt attatgtcaa
      421 gcgtggtatg ttttattgat tggcctgccc atttatttgc tggtcttatt taagcgtatc
      481 cgacaagaag aacaggcgat ggcaacactt ttttaacccg tttcatcaat taaaaatata
      541 tcgacaaaga gaaccgtcta tcaattaaat ccattcttat cattggggca ggcttattgt
      601 cattgggcaa gccgtgacaa aagcccgaac ctgcaaaact tatctataag gctgcatcag
      661 tgcgtattga agccccgcct tttttgacaa aaaaatgccg tctgaaggct tcagacggca
      721 tttgttcggt ttggcaaagc cggcggctta tgcggcaaaa cgtttggcga cttcgtccca
      781 gttgacgatt tcccaaaaac ctttcaggta gttggggcgg ctgttgcggt agtcgatgta
      841 ataggcgtgt tcccacacat cgcaggtcag cagcggcgtg ttttcagtgg tcagcggagt
      901 tgccgcgttg gaagtggaaa ccaaagccaa tccgccggca ggggttttta ccagccacgc
      961 ccaaccggat ccgaaagttc cggccgcgca ggcattgaac gcttcttgga atttttcgaa
     1021 gctgccccat ttcgcgtcga tggcggcggc cagttcgccg gcaggcttgc cttggccttt
     1081 gggcgtgaaa cccagccagt agaaggtgtg gttccaagtt tgagccgcgt tgttgaacac
     1141 gccgcccgaa gattttttca caatctcttc caaaggcagg ttttcaaatt cggtgccttt
     1201 gatttgattg ttcaggttgg tgatgtaggt ttgatggtgt ttgccgtagt ggaattccaa
     1261 agtttctttg ctcagatgcg gggacaatgc gtccggccca taaggcagtt gcggcagctt
     1321 atgttccatt ttgtgctcct aatattgttt taaatgttgt gttttggcag tgttgctgca
     1381 aacgaatcgg cggctcacgc attctacctg ttttgagtga tggaaaccaa ttaaacctgc
     1441 tttgcgttat aatagaagat tgcaatttcg gcatgacaga ttggatgtac catgaacgat
     1501 tacgcagcta tgccgcctga aggccgtgag gtcggcgcat tgtcgctgcc cccgcattcg
     1561 atggaggcgg aacaatccgt tttgggcggt ttgatgctgg aaaatccggc ttgggacagg
     1621 attgccgatg tggtttcggg agaggatttc taccgccacg aacaccgcct gattttccga
     1681 tccattgcca aattaatcaa tgagggccgt cccgcagatg tgattacggt tcaggaagat
     1741 ttgcagcgga acgaagaatt ggaagcggca ggcggatttg aatatctgat tacactggcg
     1801 caaaacaccc cgtctgccgc aaacatccgc cgctacgccg aaatcgtacg cgagcgttcc
     1861 attatgcgcc aactcgccga agtggggacg gaaatcgccc gcagcgcata caatccgcaa
     1921 ggcagggacg cggggcggct tttggatgag gcggaaaaca aagtgtttca aatcgccgaa
     1981 agcaccgcca aatccaagca gggctttttg gagatgcccg atttgctgaa agaagtcgta
     2041 cagcgcatcg atatgcttta ttcgcgcgac aatcccgatg aagttaccgg cgtaccgaca
     2101 gggttcatcg accttgataa aaaaacctcg ggtctgcagc ccggcgacct gattatcgtc
     2161 gccggccgcc cgtctatggg taaaaccgcg ttctccatca atattgccga gtatgtcgcc
     2221 attgaaaaac atttgcccgt cgccgttttc tcgatggaaa tgggcggggc gcaattggta
     2281 atgcgtatgc tcggttcggt cggacgcttg gatcagagcg tcctgaaaac aggcaggctg
     2341 gaagatgaac attgggggcg tttgaacgag gcagtcgtca aactttccga cgcgcccgtg
     2401 tacatcgacg agaccccggg cctgactgcg ctcgaactgc gcgcccgcgc ccgtcgtctc
     2461 gcccgtcaat ttaacaataa gctgggatta atcatcattg actacctgca actgatggcg
     2521 ggatccggcc gttccgacaa ccgcgcttcc gagcttgggg aaatttcccg ttccctcaaa
     2581 gccctggcaa aagaattgca agtccccatc atcgccctgt cgcaattgag ccgcactgtc
     2641 gaacagcgta ccgacaaacg cccgatgatg tccgacttga gggagtcggg ggcaatcgag
     2701 caggatgccg acctgattat gtttatgtac cgcgacgaat actacaacca ggactcaccc
     2761 atgaaaggcc ttgccgaatg tatcatcggc aaacaccgca acggtcccgt cggtaaaatc
     2821 ttcctcacat ggacgggaca attcaccaaa ttcgacaatg ctgcctatgt tcccgaggag
     2881 gcaaagatag aagattaaat ggctatataa aaatttatta ggcggaatca ggcaaaatcg
     2941 tttaaaatca tgcttagaga ttgccctaaa aaataaaacg cggtcttgag gcatttttgc
     3001 attcagcccg catataattg aaaatatagt ggattaacaa aaatcaggac aaggcggcgg
     3061 gccgcagaca gtacaaatag tacggaaccg attcacttgg tgcttcagca ccttagagaa
     3121 tcgttctctt tgagctaagg cggggcaacg ccgtaccggt ttgaatttaa tccactatac
     3181 attaccaatt aacgtcctat tgcttatgtg tacacgaaaa caacaaggtt tcacgctaac
     3241 agagctgctc atcgtgatgg ccattgcagc cattatggcg acgatagccc tccccaatat
     3301 gagtgggtgg attgcatcac gccgcattgc cagtcacgcg gagcagattg ccaacctttt
     3361 gcgtttctcc aggggcgaag ccgtccggct caatctccct gtctatatct gtcctgccca
     3421 agttaaaaaa gacggtacgg tcgacaacca atgcgacttc ggtaagaagg aacaggggat
     3481 gttggctttc ggcgacaaaa acgacaataa ggcatatgac ggcgatgctg cggatgtttt
     3541 tctccgtaac gtggtattga atgatgatat caaggataag cggattaatt acaccttcaa
     3601 tcatatcgct ttcggttcgt ctcagccgac cgccgaccgt gtagtttgga cattcaatca
     3661 aaacgggacg ttcggttata cgaaagacca gcatcttgca agcacatcca gcttttttta
     3721 ttccgacggt tatatccaaa tcgtgctgac agatgcgaga gcagtttcag atgccgatag
     3781 gaaattccgt tcggcggtgg ttttgattga cagcagcggc agggtcgaag tttgtcgtaa
     3841 aaacgatacg cgcgccgtat gcaaacatta atgactgttt tagtcggttt gggaaataaa
     3901 aaatgaagaa taatgattgc ttgcgcctga aaaatcccca gtccggtatg gcgttgatag
     3961 aagtcttggt cgctatgctc gttctgacca tcggtatttt ggcattgctg tccgtacagt
     4021 tgcggacagt cgcttccgtc agggaggcgg aaacgcaaac catcgtcagc caaatcacgc
     4081 aaaacctgat ggaaggaatg ttgatgaatc cgaccattga ttcggacagc aacaagaaaa
     4141 actataatct ttacatgaga aactctatac catcagctgt ggatggcgat tttaaggttg
     4201 atgccgtgaa aagtaaggtg cagttggcgg atgaacaatt gaagagattt ggttatgagc
     4261 tgaaaaatgc cttgccggat gcggtagcta ttcattacgc cgtctgcaag gattcgtcgg
     4321 gtaaggcgcc ggcattgtcc ggcgatgctt tttcttcaaa ttgcgacaat aaggaaaacg
     4381 gggatacttt aattaaagta ttgtgggtaa atgattcggc aggggattcg gatatttccc
     4441 gtacgaatct tgaggtgagc ggcggcaata tcgtatatac ctatcaggca agggtcggag
     4501 gtcgtgaatg aaacgtaaaa tgctaaacgt accaaaaggc ggttatgatg gtatgaaggg
     4561 ttttaccatt gttgaatttc tggttgcggg cctgctcagt gtgattgtcc tgatagcggt
     4621 cgtatcgagt tactttacat cccggaaatt aaatgatgcg gcaaacgagc gtcttgccat
     4681 tcaacaggat ttgcggaatg cggcaacatt gattgtccgc gatgcaagaa tggcggggag
     4741 cttcggttgt ttcaatatgt ccgagcatat cgaacaggat gttgtttccg atgtgacgca
     4801 aaaaaaccct cctttttcct taaaaaggaa cagtacaagg aacagtacaa ataaacttat
     4861 ccccatagcg gaatcttcaa atatcggata tcagggtttt atccagcgcc ttaacgcatt
     4921 gattttccaa tacggaatcg atgatgttaa tgcaagcgcc gcgactaccg tcgtcagcag
     4981 ctgtggcgca atatcgaaac cgagtaagca aatccttact ttagaagatg caaaaaaaga
     5041 attggagatt ctgaatcagg ataaggagca aaatggcaat atagcgcgtc aaaggcatgt
     5101 ggtcaatgcc tatgcggtcg gcaagattgc cggtgaggaa ggtttgttcc gcttccaatt
     5161 ggatgataag ggcaagtggg gtaatcctca gttgctcgcg aaaaaggtta aacgtatgga
     5221 tgtgcggtat atctatgttt ccggttgtcc tgaagatgaa gatgccggca aagaggaaca
     5281 attcaaatat acggataaat tcgacagctc tgttacgcct gccggggtgg aggttttatt
     5341 ggatagcggt agtgatgcca agattgccgc ttcttcagat aatattattt atgcttaccg
     5401 tatcaatgcg acaatacgcg ggggaaatgt atgcgcaaac agaacacttt gacaggaatc
     5461 ccgacttctg acggacagag ggggtccgca ctgtttatcg tgctgatggt gatgatagtc
     5521 gtggcctttt tggttgtaac tgccgcccag tcctacaata ccgaacagag gatcagtgcc
     5581 aacgaatcag acaggaaatt ggctttgtct ttagccgagg cggctttgag ggaaggcgaa
     5641 tttcaggttt tggatttgga atatactgcg gatagtaagg ttacatttag cgaaaactgt
     5701 gaaaaaggcc tgtgtaccgc agtgaatgtg cggacaaata ataatggtaa tgaagaggtt
     5761 tttggcaata tcgtggtgca aggcacgccc accgttgagg cggtgaagcg ttcttgccct
     5821 gcaaagtctg gcaaaaattc taccggcctg tgcattgaca atcagggagt ggaatatgag
     5881 aaaggtacgg gaaacgtcag caaaatgccg cgttatatta tcgaatattt gggcgagaag
     5941 aataaccaaa atatttacag ggttactgcc aaggcttggg gtaagaatgc caataccgtg
     6001 gtcgtcctgc aatcttatgt aggcaataat gatgagcaat aaaatggaac aaaaagggtt
     6061 tacattgatt gagatgatga tagttgtcgc gatactcggc atcatcagcg tcattgccat
     6121 accttcttat cagagttata ttgaaaaagg ctatcagtcc cagctttata cggagatggt
     6181 cggtatcaac aatgttctca aacagtttat tttgaaaaat ccccaggacg ataatgatat
     6241 cctcaagagc aaactggaaa tatttgtctc aggctataag atgaatccga aaattgccaa
     6301 aaaatatagt gtttcggtaa ggtttgtcga tgcggaaaaa ccaagggcat acaggttggt
     6361 cggtgttccg aacgcgggga cgggttatac tttgtcggta tggatgaaca gcgtgggcga
     6421 cggatacaaa tgccgtgatg ccacttctgc ccaggtctat ttggagacct tgtccgcaaa
     6481 taccggctgt gaagctttct ctaatcgtaa aaaatagggt tgttttgcca ataccgtctg
     6541 aagatcaatt ttcagacggt attttttatg ggcattttga aatgaattat gccatcaacc
     6601 atcccgagat gcctgacgag ccgaccccta tcaatacggt aaacaacata gaaaaacggc
     6661 aggccgcaaa ggcggttaac gcgatggcaa taagttcgtg cggcttgtcg gagacaaaat
     6721 agggggcaat gacggaaatg aggacgcagc ccggcgcggc ttccataacg gtttgggcgc
     6781 ggcggcttaa ggttcggtta cgcagtgcga aaaagccgat taaccgggta gggcaggtaa
     6841 cggcaagcat acaggaaaac agcaggaatg atggggacga caataaatct ttcatttccg
     6901 cccattccaa aaataggcgg acaacaggcc ggacagcgtg ccggcgggaa cataccacgc
     6961 gccgtcaacg gtcaggtaaa cggcggatgc gacaaacagg ttgacaaatc aaggtattga
     7021 tgcggaaaga tttttccaca ttcccctcag taaaaccaga aatacggcag gaaacgccat
     7081 accgaacccc caagcggcca cattgccgaa cccagcctac tgccgcgccg agggcggcaa
     7141 accctatcag gtaatgtaga ggataaagca tgcgcccata taagaaggca tattgaatgc
     7201 aggcaaaccg gctgctttcc gtttttggat ttcggagaat gccatggccc ggctttcatc
     7261 acacataaaa aacagcgcgg gcgcggcttt tttcagcggt attcctttca ggtgcgtggc
     7321 aagcgccgcc cccatcagga tatgccgcga attaatcata aaggttatgg tggcgataag
     7381 cagtatcggc agaggttccg cccacaggtt gaccgtggca aattcggagc cgccggcaaa
     7441 gttcatcccc gtcatcagca gcatttccag ccgggccata cctttttgcc cgccctgcat
     7501 tccgagtatt aatgcccaag gcagcagccc gataagcata ggcgagcttt cttttatgcc
     7561 gcgtatgaat tcatcacgtg gagaggctgt gtgcgtcatg ttaatgttta tatatgaaga
     7621 gacggggcgg tatcatacac aggcagaatg tttttgacag tcgaggatgg tttcaaaaca
     7681 aaagcagttt gttgtgtttc agcgtaaaca cggcttgtgt ataatctcca atctttgaaa
     7741 ccggccgtat gcaggagcag gacgatgaat attgaagtag aaatgaaagt gttggacgag
     7801 aggatggcgg attttatccc tgcctatgcg acggagggtt ctgcaggttt ggatttgcgc
     7861 gcctgtttgg atgaggaagt cgttttgcag ccgggcggaa cgttgcttgt gccgacaggt
     7921 ttggcaattt atttggcgaa tcccgcatat gccgctgttt tgctgccacg ttccggcttg
     7981 gggcataaac acggcattgt cttgggcaat ttggtcggtt tgattgactc cgattaccaa
     8041 ggggaattga aggtgtcgtt atggaatagg ggtagcgaac cgtttgccgt caagccgttc
     8101 gagcgtatcg cacaaatggt tgtcgtgccg gttgtgcagg cgcgtttcaa acgtgtcgag
     8161 gaatttgtcg gaagcagccg gggtgagggc ggcttcggca gtacgggttt ccattgaata
     8221 tagaatgccg tctgaagggc acgtcagctt cagacggcat atcttccgat ataccgataa
     8281 ccggagaaaa tcatgaatac cttactcaag cagctcaaac catatccctt tgcccgactg
     8341 cgcgaggcga tgcagggcat ttccgcgcct gaaggcatgg aagccgtccc actgcatatc
     8401 ggcgaaccga aacacccgac accgaaagtc attacggatg cgctgaccgc ctcattgcgc
     8461 gagttggaaa aatatccgct gacggccggt ttgcctgaat tgcgtcaggc gtgtgcaaac
     8521 tggttaaaac gccgttacga tggtttgaca gtggatgcgg ataatgaaat tttgccggtt
     8581 ttaggcagca gggaagccct gttttctttt gttcaaaccg tgttgaaccc tgtttcagac
     8641 ggcctaaaac ccgtaatcgt cagcccgaat cccttttatc agatttacga aggtgcgaca
     8701 cttttgggcg gcggtgaaat ccattttgcc aattgccccg cgccgtcttt caaccccgat
     8761 tggcgcagta tttccgaaga ggtttgggaa cgcaccaaac tggtgttcgt ctgctcgccc
     8821 aacaacccca gcggcagcgt gccggatttg gacggatgga gagaagtttt tgatttacag
     8881 gataaatatg gtttcattat tgcctcggat gaatgctatt ccgaaatcta tttcgacggc
     8941 aacaaacctt tgggctgcct gcaggccgcc gcacagtcgg ggcgaagcag gcaaaaactg
     9001 cttatgttca ccagtttgtc caagcggtcc aatgttccgg gtctgcgttc cggttttgtc
     9061 gccggcgatg cggaactgct taagaacttt ctgctttacc gaacctatca cggcagcgca
     9121 atgagtattc ccgtgcagcg tgccagtatt gccgcttgga atgacgaaca acacgtaatc
     9181 gacaaccgcc gcctgtatca ggaaaaattt gagcgtgtta ttcccatttt gcaacaggta
     9241 tttgacgtta aattaccgga tgcctcgttt tacatctggt tgaaagtccc cgatggagac
     9301 gatttggcat ttgcacgaaa tttatggcaa aaagcggcta tccaagtatt gcccggacgc
     9361 tttttggcgc gggataccga gcaggggaat cccggggaag gttatgtccg tatcgctttg
     9421 gttgccgatg tcgcaacttg tgtcaaagct gcggaaacca ttgtttccct atatcggtaa
     9481 agaataaaaa ataccgtctg aacttttgtt cagacggcat ttttcaatat tttacggttg
     9541 aatttgctat aacggtattt atagtggatt aacaaaaatc aggacaaggc ggcgagccga
     9601 agacagtaca aatagtacgg aaccgattca cttggtgctt cagcacctta gagaatcgtt
     9661 ctctttgagc taaggcgagg caacgctgta ctggtttaaa tttaatccac tatacttcac
     9721 ttttaatcgg cttgcccgca aacacgttta aacttaaaat ccccatgttt gacactatac
     9781 cgagcagatt atgttttttg ttctttcccc tgcgaaaaac cttaacgaaa aagacccttg
     9841 ccctgtcagc gagtttaccc aacccgacct gctggcagaa tccgaaatcc tgatgcgcca
     9901 actgagggag cttgcgccgc aacagattgc agagttgatg cacgtttccg acaaaatcgc
     9961 acttctaaac gccgaacgaa atgcagcgtg gcacacgccg tttacgccgg aaaacgccaa
    10021 acaggcagtc tttatgttca acggcgatgt ttacgaaggt atggatgcaa acacattgaa
    10081 taccgatcaa atacaatatc tgcaagggca tgtacgcctg ctgtccggtt tgtacggtct
    10141 tcttcgcccg ttagacctga tacagcctta ccgtctggaa atgggaacgg catttgccaa
    10201 tttgcgcggc aagaacctgt atgagttttg gggcggcatc attaccaacc ttttaaatga
    10261 cacgcttgcc caagcgggca gcaatacgct tgtcaatctc gcctcacagg aatatttcaa
    10321 gtctgtcaat gtaaaaaaac ttcgggcgcg gctgattacc ccgatattta aagacgaaaa
    10381 aaacggtaaa tataaaatta tcagtttcta tgccaagcgc gcgcgaggat tgatggtgcg
    10441 ctatgcggca gaacacaata ttaccgatcc tgaaatgctg aaaaatttta attatgaagg
    10501 ctacgcattc aatgacgcgg cttcaaatga aaacgaatgg gtgtttatgc gttcggaaca
    10561 aataaagtga aaacaataaa ttaagtattt cccaaaaaaa gtgcttggca aaatgtataa
    10621 acttcattat tattcctact cgtcaagaag acggaagcgt ggcagagcgg tttaatgcaa
    10681 cggtcttgaa aaccgtcgag ggttgatagc cctccgtgag ttcgaatctc accgcttccg
    10741 ccaatttttg agcgtaaaac caaataaaaa tgcaatagcc gcgaatattg ttatttttat
    10801 ttggttttac tgcattatcg gaaacgtggc agagaggctg aatgcagcgg actcgaaatc
    10861 cgctgagggt gcaaatcctc cgtgggttcg aatcccaccg tttccgccgc aaagcaaaac
    10921 cgccctgatt cagggcggtt cttttttgtt caagttttgt tgattaccat ataaaaatca
    10981 tcggcttgac ctatcataac gcttcaaggc aaatcatttg caatcttgcg gcatcttctt
    11041 attgcatttt tttatggtaa tgtatatggt aatttttgga taagtgggaa attaccataa
    11101 tggcgaaaat cattacgccg ctgtcggcaa atcaggttaa aaatgcgaag ccgcgcgata
    11161 agctgtataa gttgtcggac gggggctggc tttgtgggtc tacccgacgg gcggacggag
    11221 ttggaagctg tcgtttgtgc aggatggaag gcagcagaca atttcgctgg ggcggtatcc
    11281 tgatttttcg ctgaccgatg cgcgggaatg gcgggaggag gtgcgccgaa aacgggcaca
    11341 cggggaaaat gtcgtcaata agaaggtgcg ggcggatttt gcttttgaga aggtggcgcg
    11401 tgattggttt gtgcgttggt cgaaggggcg gtctgaaaag tatgccggac aggttatgcg
    11461 gaattttgaa cggtgggttt ttccggctat cggcaatctt gatatccgtc aagtcaggac
    11521 ggcggacgtg gtcggctgcc tgcgtgtgat ggaggcgcgc ggtatcgttg atacgttgcg
    11581 caaaacgaaa aacagtctga agatggtgtt tgcgtttgcg gtcggttcgg gaatgatgga
    11641 aatcaaccct gtcgcgcaaa tcggttcggg tgtgtttgaa cgggtgaaaa ccaaaaacat
    11701 gacggcgttg agtccgtccg aattgccgcg cctgattgat tttttggagc agcgcaatga
    11761 atttgcggtt tatgcgggca gggtgcatat ccatcctgta acgcggtttt gtatctattg
    11821 gctgctgttg acgatgacgc ggattcggga ggcggcgttg atggagtggt cggagttgga
    11881 cggggaggtt tggcgtatcc ccgccgaacg gaaaaaggag cggcgggggc atgatgtgcc
    11941 gctgtcgcgg gcgatgcggt gggtgttgga tcaggcgcgg gggctgaatg tgaatgggcg
    12001 gtttgtgttt gaaagtgtga attttcaagg gcatatcaat aaggaaagtc cgcgcgtggc
    12061 gatgcggcgg tcggggctgg atacgacggc gcacggtttg cgctcgcttg cgcgtactta
    12121 tttgcgcgag gttctgaagg tgtataatga tgtggcggaa aagctgcttg cccattcgtt
    12181 ggggacgagg acgcaaacgg cttacaaccg ctcggagctt tgggaggagc gtaaggatgc
    12241 gccggaacgg tgggggaatg atgttttgag gcttgccgac aacggaaaat gatttttttg
    12301 tgtgttttgc gttatgtgga aatgtagata agaaagctgt ttccgcatta tgtgaaaacg
    12361 ccctaatcgg gcgttttttt attgctgcaa ccctaatgct tccaaaactt cgcgggtgtc
    12421 ccatacgggg gatgcgaggg gggttcagac ggcacggtat ccgtccgtct ttttccatac
    12481 gcagcagtgt cgagtttgaa atggggtggt tgcggcaggt tgcgtaggca atcagttcgc
    12541 ggatggtcgg gcggtctatc cttgcgcccg gtttggtgat gttcattttt ttactctcct
    12601 gttcggttta atcttgcgcc gtttttacgg ctctgtcgtt tgtctgccta cttcttcttc
    12661 ccgatttttt tatatcgcaa caagctttcc ggcgggaaga atatgtcaaa gtctgttttc
    12721 aaatcgggac tgacgatgtc ggcggcaatc acgccgtagc cggtggcaaa gctgtcgcca
    12781 tcagcgttat gaataactat atgcccgctt ttgattagaa taacgcggcc gaatccggat
    12841 ttccggattc cgcctttttt cggggcggtt gcaaatgcca gtgtttccat ccgcccttgt
    12901 acgtcggaag actccattgc ttcgccgacc gcttttttga cgggcgttta ttgaatactt
    12961 cgtattccat gtcttcaatc ctctttccgt tgattctgat ttgtccgggt ttccgctttt
    13021 ttacggcttg gcatgcggca attgcgtctt tcatattcgg catatccttt ccccaatccg
    13081 ccgaagtttc cgcatccgct gccgtctcga ttcatgtttg ccctccgatt tgttttacga
    13141 agcccgtacc gttcacggca tagtgtaact tcacttgctt acccgattcc attcctcggg
    13201 ttaatgcctc atattccatt tttgaccctt gtaggattga cgatttcgca tctcttgtcc
    13261 ttgcttcggc catatccgga tattctttct ttttgtatcc gtccataatg gctttttctt
    13321 catctgacat ctcaaatttt ttgactgttt cccaagcgct cgcaatccaa ccgccgcaaa
    13381 atcggtcggc aagataagtt ctgtgcgagg gctttcccgc ccggcaggtt ttcaaaaatt
    13441 tgcggcggtc ggcggaaatc tgacgataga ctacatcaaa ggcataggct gaggtttccg
    13501 ctcgatttcc aatgccgtaa aacatcattg ttttcccgcg ttggtaagat ttgcacccga
    13561 atatatcggc aatcatattt gcaacgcccc attgccagcc tgccaattta aaagccattt
    13621 tccgatcggc tttctgttcg gagacttttg ataaggcgat atcctcggca tttactttgt
    13681 acttttccat taaagcctgc gcctgcctta acgcctgtgc ggcttcatgt tcatttgccg
    13741 accgacccaa agccaaacat ttcttgattt tgtctaagac tttctcttta tccatattaa
    13801 accctttaat ttgtccggta ttttaatttc gcacccttgc ccattcgtct ttcgctttgc
    13861 tttcgattcg gtcgggccat tcggctaggg ctgatacgct tacgaactcg gggctttttt
    13921 gtttccgcct gccgagatta ccggccgcgg cagggtagtt ttgcaacaag gctttgcagg
    13981 cttcgggctg tatttccacg gcgtgaaatt cagacggctt aatataccgt tcaagctgcc
    14041 tgcttcctgc cgcgccgtca aatacgcccg ggtgttcgcc gcagtatcgg cggactttgg
    14101 cggcaa
//
LOCUS       DAWXHA010000061        13639 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.061, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000061 DAWXHA010000000
VERSION     DAWXHA010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13639
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.061"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            397..1893
                     /gene="ccoG"
                     /locus_tag="AABD07_001334"
     CDS             397..1893
                     /gene="ccoG"
                     /locus_tag="AABD07_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HFB2355855.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKVKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPSGLI
                     RYTTESALEHEYAEKDIKKRLLRPRVAGYGAVLAVVVAAFLVGLSTRKMVEVDILKDR
                     GVMVRENAKGWLENAYSLRIINNSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETI
                     TLPVQVSTIPEYADKGSHPIEFIFQYRESGASDGKPVVLEEDATFIGE"
     gene            1896..2444
                     /locus_tag="AABD07_001335"
     CDS             1896..2444
                     /locus_tag="AABD07_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HFB2355856.1"
                     /translation="MSQNNPIKPWYKHVWPWVLMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLPPANHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(2786..3961)
                     /locus_tag="AABD07_001336"
     CDS             complement(2786..3961)
                     /locus_tag="AABD07_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HFB2355857.1"
                     /translation="MQNIFDPLIIRGKSLIPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEITEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKNLGLEGEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLASAETEKVV
                     EFMSVAGLPARGIRTKFLDSYIRREGKLQANAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDQLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(4398..4472)
                     /locus_tag="AABD07_001337"
     tRNA            complement(4398..4472)
                     /locus_tag="AABD07_001337"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4437..4439),aa:Glu,seq:ttc)
     gene            complement(4490..4566)
                     /locus_tag="AABD07_001338"
     tRNA            complement(4490..4566)
                     /locus_tag="AABD07_001338"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4530..4532),aa:Arg,seq:acg)
     gene            4657..6069
                     /locus_tag="AABD07_001339"
                     /pseudo
     CDS             4657..6069
                     /locus_tag="AABD07_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
     gene            6179..6367
                     /locus_tag="AABD07_001340"
     CDS             6179..6367
                     /locus_tag="AABD07_001340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355858.1"
                     /translation="MPSEFFQTAFLPTRFACRVGLPVRPEASDKQGGFYSGLNLNRYG
                     VASPCRTICTVCGFAALS"
     gene            complement(6408..8228)
                     /locus_tag="AABD07_001341"
     CDS             complement(6408..8228)
                     /locus_tag="AABD07_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HFB2355859.1"
                     /translation="MIERLKAVENQAEAMGRGARSAYLKQQAQELGISLATLYRKLEA
                     VSVKPTRKRRSDAGKTELKPEEAKLISAVLAEAMRRNGKRLMPVRQAVEMLRANGKIE
                     AARIDGETGEVIPLSENTITRALREYKLHSDQLLQPDPVSRMKSEHPNHCWQIDPSLC
                     VLYFLPRQGKDTGLRVMKEEEFYKNKPKNVVKIENDRVWRYTGTDHASGTISVRYYFG
                     GETSANLCDFFIYMMQAKKDIGKDPFRTVPRMVMLDPGSANTSAAFKNLCKPLDVHVQ
                     INKPGNPRAKGQVEKANDIVETAFESGLRFTEVHDIDQLNALSERWMRYYNGTQKHSR
                     HGMTRYQAWNKIKPEQLILPPPAEYCRELAVSAPKEAKVSADLEIRFGGRVYSVKGIK
                     GILVGKKVLVGKKVLVGKKVLVGKKILVGKNPWEANGARVATYDAEGNEVWVSVPEVV
                     FDEMGFKADAAVIGAEYKAPADTDAQRHRKELDKLAMGAETLEAAAAKRKGKAVPFGG
                     KIDPYKHQEDTLAASNTLFMPKQGQQMDYNKMEVAEQVLSKVEIAKRLKPRVEADGGD
                     WKQAVSVILKHYPEGVTEGRLEEAFERTRTRCRLKLLKTG"
     gene            complement(8221..9102)
                     /locus_tag="AABD07_001342"
                     /pseudo
     CDS             complement(8221..9102)
                     /locus_tag="AABD07_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009426280.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(9139..9423)
                     /locus_tag="AABD07_001343"
     CDS             complement(9139..9423)
                     /locus_tag="AABD07_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009426279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HFB2355860.1"
                     /translation="MATSKKAQRLLRVFLAMDAHPVIGISNKELSDGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRKQQERLNARLQELENRIY"
     gene            complement(9410..9640)
                     /locus_tag="AABD07_001344"
     CDS             complement(9410..9640)
                     /locus_tag="AABD07_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HFB2355861.1"
                     /translation="MEKPLNFKPIPYLQTRGSTAVWFKRNGVCKTHRAKHFNLERTAV
                     EHPLRGKLKGNFGKSHEAAVKLGLKEDADGDE"
     gene            9912..10292
                     /locus_tag="AABD07_001345"
     CDS             9912..10292
                     /locus_tag="AABD07_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2355862.1"
                     /translation="MEKTSLFGKRLKEERIKLGLNQAEAAEKCGFSREMWGKWERGEN
                     RPSSEKLFSFSKIGIDIDYVMHGRRGETAAMPSESLSAEEKELLALFRQLGSGSRKEL
                     ADYAAFKLVVEKKAQTALGKVSNG"
     gene            10526..11566
                     /locus_tag="AABD07_001346"
     CDS             10526..11566
                     /locus_tag="AABD07_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HFB2355863.1"
                     /translation="MKKIITHRIYPKNENRERVEPKISTHLIDLPITARRTLETRLTK
                     ALGNKSHGIEMSVVNTAENSFFQIAAAIQLKEEAEFIEDSAQFAHMLTDAQLNTNAPG
                     GILLVLKGRVGDTGKPFLCVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIG
                     FLVAETVRPLEQIQSGNYRAFLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQD
                     FFEWTRNFIDNSDLSDDAKLDAHEALRVTLKSAEATISVNNFAQNHLPQEKRTTYTEF
                     MVEKDFPQNAVSKDIEYIKTRLRKRRSYGFSNGVVILTPPEHTQDYMEIAPTEDGEYT
                     VVLIKGQLQQQK"
     gene            11671..12572
                     /locus_tag="AABD07_001347"
                     /pseudo
     CDS             11671..12572
                     /locus_tag="AABD07_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014821705.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12692..12979
                     /locus_tag="AABD07_001348"
     CDS             12692..12979
                     /locus_tag="AABD07_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355864.1"
                     /translation="MIEFVRAKKRLLWAFVLLLAWACGYRYAADKAEAEQTALIAAYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQSTDLAAALSELDKTRNTLQE"
     gene            13053..13274
                     /locus_tag="AABD07_001349"
     CDS             13053..13274
                     /locus_tag="AABD07_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355865.1"
                     /translation="MPSDTPIKTVAVAEIPPVPSGLLVEYERPERPAGGSPEQLLNHA
                     VRYGGYYRKLEIQIEGWQNWHTKGRLKHD"
     gene            13267..13476
                     /locus_tag="AABD07_001350"
     CDS             13267..13476
                     /locus_tag="AABD07_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HFB2355866.1"
                     /translation="MTDFADRASEREAEFLVEALAKHQPPSENTAGFSHCEDCGDPIP
                     EAKRKAVRGCTRCVVCHEYIQLKTK"
BASE COUNT         3347 a         3291 c         3402 g         3599 t
ORIGIN      
        1 ttcgatttgc gggcgaagcc tgccattatt ccttttgaaa taaaacgtta tagattgtgt
       61 gccggattgt tgatagcgtt tgtttatgag cttgcgccgg cggttctgcc gataaggggg
      121 tgtctgtttt tttagtcttt gttttttaag agtattttaa ttttgttcgg gcggtgcggt
      181 aaaatcaggg cgttttgatg cggatgggaa atgtattcgc ccaatacatc cggacggcgc
      241 ataaagttgt acaatagcgg gaatatattt tgggaaaagc ggattttctc aaaacttgaa
      301 acacaatgcc ttaaaaaaac aagaaaaatg acgtctgaaa agcaaaacgg cggcggtaac
      361 gggcaaacca tcaatcaaaa atctaaggaa tgcagaatga ccacggaaaa ccaagccggc
      421 agtccggcat ccggaatcgg cacgtccgaa caaacaaaag ccgcgccgaa agtgaaaaaa
      481 acgttcgatc cgcgtgccag cgtgattcaa atccatcccg aaggcgaacg catccatccc
      541 aaaaaggcgg aaggacggtt cgccaaactg cgtatcgccg ccgtattggc gacccagttt
      601 gtgttttacg tcattccgtg gttcaattgg agcggaaggc aggccgtcgt tttcaatatc
      661 cccgaacggc atttcttcat tttcggattg tcgttggggg tgggcgattt gatttacctt
      721 gccctgctgc tgatgatttg cgccttcggg ctgttttggt ggacgacgat tgccggccgt
      781 ttgtggtgcg gctattcctg cccgcaaacg gtttacaccg aaattatgct gtggatcgac
      841 aacctggtcg aaggcgatag aaacaaacgc ctgaagctgg aaaaatcgcc gtggaatttc
      901 accaaaatcc gcatcaaagc caccaaatac ctgttgattt tccttgtctg cgcgtggacg
      961 ggcatcacgt ttgccggctg gtttgtcccc atccgccagt ttgttcccga tttattcacc
     1021 ggagcagcag gcggcggcgc gatgtttgcc gcagcgtttt acggctttat gaccttcttc
     1081 ttcgcccata ttatgcgcga aaaagtgtgc ctgcatatgt gtccgtacgc acgtttccaa
     1141 agcgcgatgt tcgataagga cacgctgatt gtttcttatg acgcggagcg cggcgaaccg
     1201 cgcggcgccc gcaagaaaac ggtcaacaag gaagaggcgg gtttgggcga ctgcatcaac
     1261 tgtgcgatgt gcgtccaagt ctgccccgtc ggcatcgaca tccgcaacgg cctgcaatac
     1321 caatgtatcg gctgcgccgc ctgtatcgac gcgtgcgatg agattatgga caaaatgggt
     1381 tatccgagcg gtttgatacg ctatacgacc gaaagcgcgc tggaacacga atatgccgaa
     1441 aaagacatta aaaaacggct gctcagaccg cgcgtggcag gttacggcgc ggtgttggca
     1501 gtggttgtcg ccgccttcct ggtcggtttg tccacgcgca aaatggtcga agtcgatatt
     1561 ctgaaagacc gtggcgtaat ggtgcgcgaa aacgccaaag gttggctgga aaacgcatat
     1621 agcctgcgta tcatcaacaa cagcgaaaaa gaacagctga ttaccgcaag tgtcaaagga
     1681 tttgacgaaa tcgccctgac cgggctgcct gaaggcggta taaaagtggc tccgcgcgaa
     1741 acaataaccc ttcccgtcca agtgtccacc attccggaat acgcggacaa aggcagtcat
     1801 cctatcgagt ttatcttcca ataccgggaa agcggtgcat cagacggcaa gccggttgtt
     1861 ttggaagaag acgcaacctt tatcggagaa taaccgtgtc tcaaaacaat ccaatcaagc
     1921 cttggtacaa acacgtctgg ccgtgggtct tgatggcggg gccgattttt gtcgtcatcg
     1981 ccagcgtcgc tatgtttttt gtcgcgcagc agcacgcgac agatttggtt acggacgatt
     2041 attataagga tggcaagcat atcgacatcc agcttcatcg ggatgaagaa gccgtcagac
     2101 ggcatatcgg ggtgcaggtc ctcatttctc ccgatatgaa tgcggcaaaa gtgtttgtcg
     2161 gcggcgagtt tgacggcaaa cagcctttga acctgctgct gatgcacccg acccgcaagg
     2221 cggacgatca aaccgtcgcc ctcaagcccg tcggcagcgc gcagaacggc agggcggaat
     2281 atgaggcggt gttcaaaacc cttccgccgg ccaaccactg gtatgtgcgc gtggaggacg
     2341 cggcaggcgt gtggcgcgtc gagaacaaat ggattaccag ccagggcaat gcggtcgatt
     2401 tgaccccgat ggacaaactt ttcaataatg caggaagcaa ataaaaaagc cgtgttttca
     2461 ttgcattggt ttgttatatg caatgtcggg caggcattgt ttgattattc ggcgtgatgg
     2521 tctgatttgt cggacgaaaa taaatgtatc tcatcccgtt tattttttaa catcattccg
     2581 aaaggcagcc tgaaaaatgc cgtctgaaag gcttcagacg gcatttgtgt tgtatgtccg
     2641 acataatgcg gaaggcattt tgttcatata aaaacgtttt tatttctctc cgttttttcg
     2701 acactgttcc ggaacacaac ctgaaaaacg ccgtctgaaa gcccttcgga cggcattttg
     2761 tttgcaaatc aaatcctacc tgatgtcagc gtccgagcgt tgcaacaggt tcgctccccg
     2821 tcagcagata ttgtatcgtt tcgcggacgg tgcggatggc attaccgaag ggaagctggt
     2881 cttttcccct gaaaaacaac cccttatcaa cttctccacg gaatgcggca gcaagctgga
     2941 tatcaataca gaattgccct gctttggaaa gcccgtcgcg cagaccgcag ctggtcaggc
     3001 agtttaaacc ttgggtacag cggcgcgggt cggctttggc gtttgcctga agtttgcctt
     3061 cgcgcctgat atagctgtct aggaatttgg tgcggatacc gcgcgccggc aaaccggcaa
     3121 cagacataaa ttcgactact ttttcagttt ccgcactggc gagcgttttt ttaaagttga
     3181 ggtgtgcatc tccttcttcg gtaacggcaa aagccgtacc gatttgaacg gcggaggctc
     3241 cccagttctt tagggcggtt ttgacttttt caaaatttgc catgcctccc gcaagaataa
     3301 gcgggatttt ttctccctcc agccccaaat ttttaaacac ttcaaacgtt tcctcaatca
     3361 cgcgtttgaa gtcgaatttg gcatcgttta cgccttcaac ggttgatgca cccaaatgtc
     3421 cggccgcatg ggcaggatgt tcgactacaa tcgcatcggg caatatgcct tttttcatcc
     3481 aacgtttcaa gacgatatta ataccgcgcg attcggacag aatcggcagc agcgcgacat
     3541 ccttatgata gccctcggtt atttccggca ggtctaaagg caggccggca cccatcacga
     3601 ccgcatccgc ccctgattcg caagcctggc ggacatacgc ggcgtggtct ttgaccgcct
     3661 tcatcacgtt gaccgcaatc agtccttttc cctctgaagc acttttggct ttttggattt
     3721 ccctgtctaa tgcggtacag ttcaaagacg tatatttctc ttcactcgga ttgatttggg
     3781 attcggcgag caggtcttcg tgaaggtggc gcaaatctac actggcaatc gttccgatgc
     3841 cgttttcacg cgccaccgcg ctggataaac ccgatgcgga aacaccgacc cccataccgc
     3901 cttgcacgat gggaataagg gattttccac gaataatcaa agggtcaaaa atattctgca
     3961 tcagtttctc cgaatatacg aatcagtcag gctcatgaaa aatggtttta attgttttag
     4021 aaccattact caaatttggt attatactct aaatattgca gtggtaaaca gaaaagcaga
     4081 aggagctttg gaatatgctg ttatatctgt accaatcgga caaaatatag tggattaaat
     4141 ttaaaccggt acggcgttgc ctcgccttgc cgtactattt gtactgtctg gggcttcgtc
     4201 gcattgtcct gatttaaatt taatccacta tattgaacgg acaccgcatc cggttacggg
     4261 atatcggttt gcatggcaaa agtttgaata tgattcgatt acgtctgaga ttctgatgaa
     4321 gtgggtaggt aaagatatgg taacgaattg ccgaggcaat aaaaatcccc gagggattat
     4381 ttcggggatt tggaatctgg cacgcccacg gggaatcgaa ccccggttac cgccgtgaaa
     4441 gggcgatgtc ctaaccgcta gacgatgggc gcgtattgta ttttcttact ggcgcacccg
     4501 gagcgattcg aacgcccgac cctctggttc gtagccagat actctatcca actgagctac
     4561 gggtgcgctg caataaattt ttgaatttta tggtaatcat cggattctgt caattatttt
     4621 gttggatgaa atgccttaaa agtgtaaaat atcggtttgt tgtttgaatt taaagagaat
     4681 aaaatgattg ttgtttcccg ctggcccttg ctggaaaagg cgtttttacg gtttggaatg
     4741 cctgttgccg tggttgattt ggaatcgacg ggcggcaatc tgtatgaaga cagggtaacc
     4801 gaagtggctt tggtcaagtt tgggcaggga agggcggaga ggtatgaatg gctggtcaat
     4861 cctcaaaaac cgattccgaa gtttgtggcg gaactgacgg ggatttcaga cggcatggtt
     4921 gccgacgcgc cggtgtttgc tgaaattgcc ggcgggttgt tttcggtatt gaaggggtgc
     4981 gtgctggtgg cgcacaacag ccgtttcgac tatacgtttt taaagcatga gtttcatcgt
     5041 gcgggtatcg gattttcatc gcctgctttg tgcagtgtgc agctttcgcg tcggctgtat
     5101 ccgcagtttt acaagcacag cctggacggt atcatcgaaa ggttggggat tgttgtggaa
     5161 gacaggcatc gtgcgatggc ggatgtatcg gcgttgtgtg attatttgga atacagcctg
     5221 tcggcacacg ggcttgagga gtggagcagg cagtgtttcc gtttgacgaa tccgaaactt
     5281 cttcctgccg cgcttcccga acggttgagg gaacagctgt acggtttgcc cgacggtaca
     5341 ggtgtgcttg cctgtttcga cggcggggga aaagtaaatt atatcggtac gtttgaacgg
     5401 gcatatggcg aggttgcggc tttgttggat tccggaaaag cccccgtttg attggtgcaa
     5461 tacggaggaa gtccgttttt ttcccgcatt gggcagcctg catgcatata agattaaagc
     5521 ggaattggtc ggacgttatc attcgggttg ttatgtatct gccaaaaatc tgcttaaaac
     5581 atttacgacc gtcaggtttg aaaaaggttc agacggcatg ttgaatgcga aaacagcggc
     5641 tttgaaaaac ggtgtgacgg ataatccgcc taccggatta tttgccaata aaaaggcggc
     5701 gagacgggct ttgtcgtcgt gggcggaaac atacggattg tgtcctgcct cagccggtat
     5761 ccttccggac ggttatgcag aggatgagcc ttgtcccgta tatgtttcag gccgatgcga
     5821 taaggcgtgc ggccgttttg acgaacaagt tttggcgttt gcacacaagt tgcctgtttt
     5881 ggattgggga aaaatgcatg aggtggaaat taccgaaacc gatcctttaa cgggggaaaa
     5941 gtcgttctgc atggaatggg cggcgcattg gaaatggatg acgggctttg gtatttcgat
     6001 aaagatttac cggatgtgtt taaggcgaag tttaaaacgg acaggaaaaa tattaaggaa
     6061 atcggttaaa tcgataccgg ttggtgaaag ctggtaagta tgtaaacagc cgttcgtatt
     6121 gattgcctga tcggtctgga ttggaatgtg ttgccgtttg caggtaatgt gtctgaagat
     6181 gccgtctgaa ttttttcaga cggcattttt gccgacgcgg tttgcgtgcc gtgtcggttt
     6241 gcccgtccgt cccgaggcat cggacaagca gggtggtttt tatagtggat taaatttaaa
     6301 ccggtacggc gttgcctcgc cttgccgtac tatttgtact gtctgcggct tcgccgcctt
     6361 gtcctgattt ttgttaatcc actataaaag ctgttttcgg ttgaaaccta accggttttc
     6421 aaaagtttca gacggcatct tgtccgggtg cgttcaaacg cctcttccag cctgccctcg
     6481 gtcacacctt ccgggtagtg tttgaggatg accgacactg cctgtttcca gtcgccgccg
     6541 tctgcctcga cgcggggttt taagcgtttg gcgatttcga ccttgctcaa tacctgctcg
     6601 gcgacctcca tcttgttgta atccatctgt tgcccctgtt tgggcataaa gagcgtattg
     6661 cttgcggcaa gcgtatcttc ttgatgtttg tacgggtcga ttttgccgcc gaacgggact
     6721 gccttgcctt tgcgtttggc ggctgccgcc tccagcgttt ccgcacccat cgccagcttg
     6781 tccagctctt tgcgatgccg ttgcgcgtct gtatcggccg gggctttgta ttccgccccg
     6841 atgaccgcgg catcagcctt gaagcccatc tcgtcaaaaa ctacttcggg tacggatacc
     6901 caaacctcgt taccctccgc gtcataagtg gcgacccgcg ccccgtttgc ctcccaagga
     6961 ttcttaccga ccaaaatttt cttaccgacc aaaactttct taccgaccaa aactttctta
     7021 ccgaccaaaa ctttcttacc gaccaaaatc cccttgatgc cttttacgct atatacccgt
     7081 ccgccaaagc ggatttccaa atccgccgag actttcgcct ctttcggcgc gctgacggca
     7141 agctctcggc aatattcggc aggcggcggc aggatgagct gctcgggttt gattttgttc
     7201 cacgcctgat agcgggtcat gccgtggcgg ctgtgttttt gcgtaccgtt gtagtaacgc
     7261 atccagcgtt ccgataaagc attgagctgg tcgatgtcgt gtacctcggt aaagcgcaac
     7321 ccgctctcaa atgccgtttc cacaatatcg ttggcttttt ccacttgccc cttggcacgc
     7381 ggattgcccg gcttgttgat ttgcacatgc acatccaagg gcttgcacaa atttttaaac
     7441 gccgccgaag tattcgcgct gcccgggtca agcatgacca tgcgcggtac ggtccggaac
     7501 gggtctttgc cgatgtcttt tttcgcctgc atcatgtaga tgaaaaaatc acagaggttc
     7561 gcgctggttt cgccgccgaa gtaataacgc accgaaatcg tgccggaggc atggtctgtc
     7621 cccgtgtacc gccaaacgcg gtcgttttcg attttgacga cgtttttcgg cttgttttta
     7681 taaaactcct cttccttcat cacccgcagc cccgtatcct tgccctgacg cggcaggaaa
     7741 tacaaaacgc acaaactcgg gtcgatttgc caacaatggt tcgggtgttc cgatttcatg
     7801 cggctgacgg ggtcgggctg caaaagctgg tcggaatgca gcttgtattc ccgtaaagcc
     7861 cgggtaatgg tgttttcaga aagggggatg acttccccgg tttccccgtc aatccgcgcc
     7921 gcctcgattt tcccgttggc gcgcagcatt tccaccgcct gccgcaccgg catcaaccgc
     7981 ttgccgttgc gcctcatcgc ctccgccaaa accgccgaaa tcaatttggc ttcttccggt
     8041 ttaagctccg tcttgcccgc atcgctgcgc cgtttgcgcg tcggcttgac gctgaccgcc
     8101 tccagcttgc ggtatagcgt ggcaaggctg atgcccaatt cctgcgcctg ctgcttaaga
     8161 tatgcagagc gtgcgccgcg tcccattgct tccgcctgat tttcgactgc tttaagacgc
     8221 tcaatcattg ccggattcat cgccttctcc cgtttcaccg cccaaccatt ccggcacatt
     8281 gtctgccggt gcttcggtcg gtagggcata gctttcgcgc agttgctcgc agtccaaaat
     8341 aatttgattg agcgtgccga ccatcttcgc gcggtggtca aatccatgcg cctcgccgtg
     8401 cgccgccatc tgctcgaaca tatcgcgcaa tcggctgatt tgcgagcgga taccgacttc
     8461 caagctgtca agctgccaag ctgcatcgtc agctcgatgc ccacatccgc aggtttaggc
     8521 tctttgacac ccgtctgctt tttcgacagc ttttccgcca gctcatcgac ctttttattt
     8581 ttatcggcaa tcaccttatc tttcgcttcc gccgtttcac ggctttcgcg cagggcgacg
     8641 cgcagctcct taatagtcat acggtcgaca tcgtcaaaag tgttgccgtt gacctcaccg
     8701 ccttcggcaa gctccaacaa agtgtcgtcg tcttcgacca gcagctcgag cagtttggat
     8761 ttgcccaacg tcatcagctt aggctgcgct tgtttcattt tcgggtcgat aaaacggagg
     8821 gtggcattca tcagtctttg ggattcccgc cgtccgaggc caactctttt tcagcgattt
     8881 cggcaaaccg cccatgcggc gtatgctctt tgatgatgat cagcgcgcgt cccggctcaa
     8941 acatcccttc catcgtttgg cgtccgcaaa tcgtccgcgc tcaatccata ccgtctcgtt
     9001 gtaggcctcg ccgcctgaaa acttgtccat aacctccata ctgtggatag ccaattcgtt
     9061 tgccgttacg ccgaccgtat gtcctaaaat ttctgttgcc atttcttttg ctcctcaaat
     9121 gcgacgacgt cgtcgcattt agtaaattcg gttttccaat tcttgcaagc gcgcattcag
     9181 ccgctcttgc tgttttctga accgctctgc gatttgtagg gttttgatgc cgtaggcgta
     9241 gttgccgttt tcaagcttga tgaccaatcc cgatgcaacc aaatcatcaa tatccctgct
     9301 gacttgtgat ggcgtcagcc ccaggccgtc tgaaagctcc ttattgctga tgccgattac
     9361 cggatgcgcg tccatcgcca aaaacacccg caacagccgc tgcgcctttt tactcgtcgc
     9421 catccgcatc ctccttcagc ccaagtttta ccgccgcttc gtggcttttg ccgaaattgc
     9481 ctttcagctt gccgcgcaag gggtgttcca ccgcggtgcg ctccaaattg aaatgtttcg
     9541 cccggtgcgt cttgcacacg ccgttgcgct taaaccacac ggccgtgctg ccgcgcgttt
     9601 gcagataggg aataggcttg aaatttaaag gtttttcaat attatttatg cctttcgtgt
     9661 ggtataatgt gtttagtttt aggcctcttt gcacgataaa catccggtct gttgtgcagc
     9721 agcagggtct tggcttgttt taaaataaac aagctttttc ccgtagccgg gtgtatgtga
     9781 tccatcatga gctgtcgcgc atgagccttc aaagtgttca ttttttcgtc ctttttcgtg
     9841 atgatttagg gtgtttcatg tcttgatgtg tgaattatga gaaaaatatt tctcttttca
     9901 aggaaattta agtggaaaaa acttctcttt ttggtaagcg attgaaagaa gaaagaatta
     9961 aattaggctt gaaccaagca gaagctgctg aaaaatgtgg tttttctcgt gagatgtggg
    10021 gaaagtggga gcgtggtgaa aatcgcccat caagtgaaaa attattctct ttttctaaaa
    10081 tcggcatcga tattgattac gtcatgcacg gcagacgcgg cgaaacagcc gccatgccgt
    10141 ctgaatcctt gagtgctgaa gaaaaagaac tgcttgccct gttccgtcag ctcggcagcg
    10201 gcagccgcaa agagcttgct gactacgccg cctttaagct ggtggtagag aaaaaagccc
    10261 aaactgcgct tggtaaagtg agcaacggat aaaaaatgcc gtctgaagat ttcagacggc
    10321 atttgggaca ctctgacagt cgggctgctc cggtgttctg aaacagatat taagcaatag
    10381 gagcggccgt gcattttaaa gcgtattaaa aaccaccccg atattcaggt catcggccaa
    10441 gtggttcaga tttcaaaaga ccttaattaa cttacaatag gaaaaatgat gacagaaacg
    10501 aattactctt ttgaagggct ggtaattgaa aaaaattatt acccatcgta tttatccgaa
    10561 aaatgaaaat agagagcgtg tagaacctaa aatcagtaca catttgattg atttgcctat
    10621 tacggcaaga agaacattgg aaaccaggct gaccaaagct ttgggtaata aatctcatgg
    10681 cattgaaatg tctgttgtca atacggctga aaatagtttt tttcagatag cggcagccat
    10741 acaactcaaa gaggaagcag agtttattga ggattccgca caatttgccc acatgttgac
    10801 cgatgcacaa ctgaatacaa atgcaccggg tggtattttg ttggttttaa aaggtagggt
    10861 tggagatacc ggtaagccgt ttttatgtgt aattaaggct gaacctcaag atgggttccg
    10921 aaccaaagaa gaggatgact ttatcacgat tgaattctta gaagaattat tactgaccga
    10981 ttcagcaaga ttattcaaga taggtttttt ggtggctgaa acagtaaggc cgctagagca
    11041 aatacaatct gggaattatc gagctttttt gtatgaccat ctgatgacac aaacggaaac
    11101 tagaccggca gcttcctatt tctatcaagt attcttgggt atgagtatag ctgcttcttc
    11161 ccgtaaattg acgcaggatt tttttgagtg gacacgcaat tttatcgata actctgattt
    11221 aagtgatgat gcaaaattag atgcgcatga agcattgcgc gttacattga aaagtgcgga
    11281 agcaaccatt agtgtaaata attttgccca aaatcattta cctcaagaaa aacgaacaac
    11341 ttatacagaa tttatggtgg aaaaggattt tcctcaaaat gccgtaagta aagatattga
    11401 atatattaaa actcgtttac gcaaacggag gtcttacgga tttagtaacg gtgtagttat
    11461 cttgactcct cccgagcata ctcaggacta tatggaaatt gcgccaacgg aagatgggga
    11521 atatactgtt gtcctaatta aaggacagtt acaacaacaa aaatgagtga tattgatgat
    11581 ttcaaaagct atttagaaag ccaccaagcg gcattttccg cttggggtag atttgtggct
    11641 gaagaaattc aaaatcaatt atccaatgtc atttctcctg ttccggttgc caattttcta
    11701 aaaattgaag caaagcctgg agtcaaagag atttcttcag ctctagccaa gattggccga
    11761 aaaaattaca cttcacctca aactcaaatg actgacttgg tcggcgtacg ttttgtggca
    11821 ttgcttgcgg aacatattca aatagtttgt gaaatcattg aatcctcatc tcagtggaat
    11881 gctaaagttt cgaaagattt tgcagatgaa attcagcaaa atcccaaagc aatttgacta
    11941 tacaatccaa acattacgag attcgtccta aacaagcatt cattacaccc gaaaatgtca
    12001 gcatccctgc tgatttgtgc tgtgaagttc aggtgcgttc tttactccaa catgcttatg
    12061 cagagctggt tcatgacaat atatacaagc ctgacggcaa tgttccaaag caagcagagc
    12121 gcgaagtcgc gaagagcatg gctttgatgg aaactacaga tgacttattt agtcgtactc
    12181 tggcaatttt gaaagaagca aatcaaccac aagaagagct tcttccccaa ttatcacagc
    12241 tttatcaaaa ggaaataggg cttgttcctg aagttgataa aaaaaccaat atgatttttc
    12301 tagaaacatt tcaatccagc atttcccaat caagtattct ttctgacatc cgttcacttt
    12361 tgaatgagaa gaaatatatt gccaagcgga taaaagaaaa tgctgaagaa atgtattttt
    12421 tcagtcagcc agcagctttg ttggtctatt ggctgattga gaaagttggt gcagatgaag
    12481 tatggaaaaa atggcctttg cctgcataca acaaaaacct gaaattcatt tgtactgatt
    12541 tggataagca accatcccat gaactctttt aacccccttt aaaagcccat tcagacggcc
    12601 tttcctaatt atgccttaat caaacgcggc atagcggcag ttccgcagct ggcggaaatc
    12661 aaaaaatccg caaatcagga agggggcggc aatgattgaa tttgtccgag ccaaaaaacg
    12721 gctgctttgg gcatttgtac ttttgcttgc gtgggcgtgc ggctaccggt acgctgccga
    12781 caaggccgaa gcggaacaaa ccgccctgat tgccgcctat cggcattctt ctatggttgc
    12841 ggcggaacaa tacgccttgc agcttaaaaa agcgcaggac gaaaggcagc ggtggtacga
    12901 tttttcccaa aaacaaagca cggatttggc ggccgccctg agcgaattgg acaaaacgcg
    12961 caacacctta caggagtaaa cccgtgaagc ggcagacaaa gacggcaacc gttttaacgg
    13021 ccttggcacg aacagcctgc acctctacaa ccgtgccttc ggataccccg attaaaaccg
    13081 ttgccgtcgc ggaaattccg cccgttcctt ccggactgct ggtcgaatac gaacgccccg
    13141 agcgtccggc cggcggctct cccgaacaac ttttaaacca cgccgtccgc tatggcggat
    13201 actaccgaaa gctcgaaatc caaattgagg gctggcagaa ctggcacacg aaaggccgtc
    13261 tgaaacatga ctgattttgc cgaccgcgca tccgaacgcg aagccgaatt tctggtggaa
    13321 gccttggcga aacaccaacc gccgtctgaa aacaccgccg gcttcagcca ttgcgaagac
    13381 tgcggcgacc cgataccgga agcaaagcga aaagccgtcc gaggctgtac gcgctgtgtt
    13441 gtctgccacg aatatattca attaaaaaca aaatagtaca acactcgacg ttgaaggttt
    13501 aaccatggca tactctgcgg acttaagaaa caaagcctta aaccatagcg gattaacaaa
    13561 aatcaggaca aggcggcggg ccgcaggcag tacgaatggt acggaaccga tccgcccggc
    13621 gctccatcac cttagggaa
//
LOCUS       DAWXHA010000062        13579 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.062, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000062 DAWXHA010000000
VERSION     DAWXHA010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13579
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.062"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(300..1235)
                     /gene="hemC"
                     /locus_tag="AABD07_001351"
     CDS             complement(300..1235)
                     /gene="hemC"
                     /locus_tag="AABD07_001351"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HFB2355867.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDRILDRTLSKVGGKGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERA
                     NPFDAFVSNRYARLEEMPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADA
                     QAPAGYADALGRAVAKKLADDGAQELIGAVLNTEN"
     gene            1354..1869
                     /gene="ybeY"
                     /locus_tag="AABD07_001352"
     CDS             1354..1869
                     /gene="ybeY"
                     /locus_tag="AABD07_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HFB2355868.1"
                     /translation="MKRAKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KNEYRRADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAA
                     GYPNPYREDGH"
     gene            1871..2695
                     /locus_tag="AABD07_001353"
     CDS             1871..2695
                     /locus_tag="AABD07_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HFB2355869.1"
                     /translation="MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDAD
                     TLTRLEKVLDFAELEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDESADNIHSVSAERWRIHAATEIEDINAFF
                     GTEYGSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(2838..4217)
                     /gene="nhaC"
                     /locus_tag="AABD07_001354"
     CDS             complement(2838..4217)
                     /gene="nhaC"
                     /locus_tag="AABD07_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HFB2355870.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQAGMIGALNQGMGAVYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTACATVGVAFMGMAAAFQADMAMTAGAIV
                     SGVFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GVIPSLLEAVRTFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(4507..5730)
                     /locus_tag="AABD07_001355"
     CDS             complement(4507..5730)
                     /locus_tag="AABD07_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HFB2355871.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTGVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVIQGWAADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
     gene            6167..6580
                     /locus_tag="AABD07_001356"
     CDS             6167..6580
                     /locus_tag="AABD07_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFB2355872.1"
                     /translation="MIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRNFPKHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLIRRFGIWLLAFAWLPVVGDALPLT
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            6627..7256
                     /gene="nth"
                     /locus_tag="AABD07_001357"
     CDS             6627..7256
                     /gene="nth"
                     /locus_tag="AABD07_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HFB2355873.1"
                     /translation="MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKS"
     gene            7394..8893
                     /locus_tag="AABD07_001358"
     CDS             7394..8893
                     /locus_tag="AABD07_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HFB2355874.1"
                     /translation="MFKKYQYFALAALCAALLAGCEKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFAQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKNGYILTNTHVVAGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKNLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKASGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKAKLGN
                     AAEHTGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGKHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            9096..10616
                     /locus_tag="AABD07_001359"
     CDS             9096..10616
                     /locus_tag="AABD07_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HFB2355875.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWADGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TASPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAASDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTFGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRADV"
     gene            10673..11758
                     /gene="nagZ"
                     /locus_tag="AABD07_001360"
     CDS             10673..11758
                     /gene="nagZ"
                     /locus_tag="AABD07_001360"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HFB2355876.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTEEEKQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCAVIGNRSFHRNPEAVARLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLDELEAADLAPFRIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGVGGIKERAR
                     ISFEAGCDIILVCNRPDLVDELRDGFTIPDNQDLAGRWQYMENSLGHEAVQAVIQTTG
                     FQAAQAFVAGLASPQDTAGGVKVGEAF"
     gene            11983..12059
                     /locus_tag="AABD07_001361"
     tRNA            11983..12059
                     /locus_tag="AABD07_001361"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12017..12019,aa:Pro,seq:cgg)
     gene            complement(12395..13033)
                     /locus_tag="AABD07_001362"
     CDS             complement(12395..13033)
                     /locus_tag="AABD07_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HFB2355877.1"
                     /translation="MKKISVAPENPQYRIVEIFESLQGEGRNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDTLKAEGYFL
                     CLETNGLKPAPPQIDYVATSPKACYAAKYETNCIAEADEVRIVADGDVLAFCENMERK
                     IRARHYYLSPCEQNGVMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
     gene            complement(13030..13398)
                     /locus_tag="AABD07_001363"
     CDS             complement(13030..13398)
                     /locus_tag="AABD07_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HFB2355878.1"
                     /translation="MKLLSTILVLLVAAEHFYIAWLEMTQIPGEKAAEMFKLPYEFME
                     QKRVQTLFGNQGLYNGFLAVGLLWAQFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAVLAV"
BASE COUNT         3415 a         3861 c         3421 g         2882 t
ORIGIN      
        1 ggtgtggaat ttagggataa tctagtacag ccacaataaa aaatacgaat atcatcattc
       61 tcaaattcaa aatttgaacg ccacagtatt atccgaagcc acaaaaacct ttccgccgtc
      121 attcccgcgc aggcgggaat ctggaaaccc aatgctgcaa gaattgatta aaaacaactg
      181 aaaccgagca aactggattc ccgcctgcgc gggaatgacg aaataaggtg agtaaaactt
      241 attaaataaa ttaattaaaa acaataactt atattatttt ctttaaattt tcgataaaat
      301 caattttccg tattcaatac tgctccaatc aattcctgcg caccgtcgtc cgccagtttt
      361 ttggcaaccg cacgtccaag cgcatcggca tatccggcag gggcttgcgc gtccgcctgc
      421 aacacaatcg atccgtcggg atgcccgacc aatccgcgca agatcagcag cccgttttct
      481 tcagtgcaat acgcggccag cggcacttgg cagcttccgc ccaaagcgcg cgccaaagcg
      541 cgttcggcgg taacgcaggc gtgtgtggta tcgtggttta acggcttcaa gacttcgtac
      601 aaatcttcgc gatgcgtggc aatttcaata cccaatgcgc cttgtccggc ggcaggcagg
      661 ctgtcggatt ccgacaaaat catgcggatg cgttcatcca attccagacg ctgcaacccg
      721 gcggcagcca agataattgc atcgtattcg ccgttgtcga gtttggacaa acgggtttgt
      781 acattgccgc gcaggggttt aatcaccaaa tgcggatagc gcgcgcgcaa ctgggcttcg
      841 cggcgcaggc tggatgtgcc gacaaccgcg ccttcgggca tttcttccaa acgcgcgtat
      901 cggttggaca caaacgcgtc aaacggattg gcgcgttcgc tgatggcggc aagggcgaag
      961 ccttcgggca aatccatcgg cacgtcctta atcgaatgca ccgccaaatc ggcgcgcccg
     1021 tcttgaaggg attgttccaa ctctttgaca aacaagcctt tcccgccgac ttttgacaaa
     1081 gttctgtcca aaatccggtc gccgcgcgtg gtcatgccca aaatttcgac ttcgcaatcg
     1141 ggatacagcg ccttcagacg gccttggata tgtttcgcct gccacatggc aagcaggctt
     1201 tcgcggctgg cgataacaag ttttttcggg ttcatgttca atgcgttcaa agaatggaaa
     1261 cggcgtggag tctatcatat tttgaacgtt tcttcagacg gcaccgtcag gtctatgtta
     1321 tatttacgcc cacaaaacac gaaacccgcc acaatgaaac gcgccaaaaa ataccctttc
     1381 ttaacgttgc agcggcaacg tttccatttg aactttgaaa acgcctcttc cgccgccggc
     1441 atccccgccg aacgcgattt ttaccgctgg gcgtggtctg ccttgaaaaa cgaataccgc
     1501 cgcgccgaca tcggtttgat tcttttggac gaagaagaag cccgcgccta caaccgcgac
     1561 taccggggca aagattatgc caccaatgta ttgagtttcg cgctcaacga aggcgaaatc
     1621 ctgccctgcc aagtttcgga aagactgtac ggcgatttga ttatctgccc gcaagtcgtt
     1681 ttaaaagaag ccgccgaaca gggcaaaacg cctgaacggc attttgccca cttaaccata
     1741 cacggcacgc tgcacctgat gggatacgac cacatcaaag acgatgaggc cgaaataatg
     1801 gaagccgaag aaatccgcct gatgcgggcg gcaggctatc ccaaccccta ccgagaggac
     1861 ggacattaaa atggacggcg cacaaccgaa aacaaatttt tttgaacgcc tgattgcccg
     1921 actcgcccgc gaacccgatt ccgccgaaga cgtattaaac ctgcttcggc aggcgcacga
     1981 acaggaagtt tttgatgccg acacactgac ccggctggaa aaagtattgg actttgccga
     2041 gctggaagtg cgcgatgcga tgattacgcg cagccgcatg aacgtattga aagaaaacga
     2101 cagcatcgaa cgcatcaccg cctacgtcat cgataccgcc cattcgcgct tccccgtcat
     2161 cggcgaagac aaagacgaag ttttgggcat tttgcacgcc aaagacctgc tcaaatatat
     2221 gttcaacccc gagcagttcc acctgaaatc cgtcttgcgc cctgccgttt tcgtgcccga
     2281 aggcaaatct ttgaccgccc ttttaaaaga gttccgcgaa cagcgcaacc atatggcaat
     2341 cgtcatcgac gaatacggcg gcacgtcggg tttggtcacc tttgaagaca tcatcgagca
     2401 aatcgtcggt gacatcgaag acgagtttga cgaagacgaa agcgccgaca acatccactc
     2461 cgtttccgcc gaacgctggc gcatccacgc ggctaccgaa atcgaagaca tcaacgcctt
     2521 tttcggtacg gaatacggca gcgaagaagc cgacaccatc ggcggcttgg tcattcagga
     2581 attgggacac ctgcccgtgc gcggcgaaaa agtccttatc ggcggtttgc agttcaccgt
     2641 cgcccgcgcc gacaaccgcc gcctgcacac gctgatggcg acccgcgtga agtaagcaga
     2701 gcctgcccgc accgccgttt ctgcacagtt taggatgacg gtacggtcgt tttctgtttc
     2761 aatccgcccc atccgccaaa cataaaaatg ccgtctgaaa ccggaaaaca ggttcagacg
     2821 gcatttcgct tatccgctta ttttttgctc aaagtcagcc ccgtccagcc gaataacagg
     2881 gttaaagcca aactcaaata gcagaaaaag gcataaggca gatattccca aacgggtacg
     2941 ccaagggcgt ggctgataaa tacgccgcac acgctccacg gcacgagcgg gttaatcacc
     3001 gtccccgcat cttccagagt ccgcgacagg ttgcgcgaat gcaggccgag tttgtcgtaa
     3061 acgggtttga acgtttctcc cgaaagcagg atgctcaaat attgctctcc aatcaggaaa
     3121 ttgaccccga ccgaagtcat ggcaacgctg aacgtcgcgc gtccggcatt cgtcaagaag
     3181 gtacggacgg cctccagcag ggaaggaatc acaccgagcg caaacagcag cccgcccaaa
     3241 ctcataccga ggataacgat ggtctgcgta aagaacatac tctccaagcc gccgcgcgaa
     3301 atcagtttgg caatgtcttt aaacgcttcg ccttcgagtt tgtagccgcc ataaaaccac
     3361 gcgccgagct gacgcagatc gggcgtgctg tgcagatacg ttacggcaac ggcggcaatg
     3421 acggtaaaga gcatggcgac cacggcattg acgcgcatca atgccaaaac gaccaacagt
     3481 gcaaacggaa tcagcgaata gccgtgcacc aatcccgtgg cttcaagctg gctgcggaag
     3541 gattcgacgc tgttcaaatc ctgcgcggcg acgctgggaa gaagccaaag catcagtgcc
     3601 gcgctgataa gccacgcggg gatggtggtg tacatcatgt ttttgatgtg ttcaaacagg
     3661 tcgataccga cgatggacgc ggaaatgccc gtggtgtcgg aaagcgggga cattttatcg
     3721 ccgaaaaaca caccggaaac aatcgcgccc gccgtcatcg ccatatcggc ctgaaacgcc
     3781 gccgccatcc ccataaaggc aacgccgaca gtggcgcagg cggtcaggct gctgccgatg
     3841 gacacgccga tgacggaaca cagcgcgaag gcggaaaaat aaaaataagt cggggaaatc
     3901 agcccgaaac cgtaatacat cagcgtcgga atcgcgccgc tcatcatcag cgcgctgacc
     3961 atcagcccga tgaagaaaaa caggtaaacc gcgcccatac cctgattcaa cgcgcctatc
     4021 atccctgcct gcatatcgtt gtatttcaaa ccgcgcgcca agccgtacaa aatcagcacg
     4081 acgatggcgg caataatgga catatgcggc agccactcca atgaaatgat ggtatagccc
     4141 attgcggcaa tcagagcgac gacgacggca agtgcctcac cgcgcggcat atcgagtaag
     4201 gatttgaaag caaacatgat tctttgcccg atttgatata aagttaacgg attctaacac
     4261 accatgccga atctgcccga cgttttcaga cggcatttta gcgttttaca aaagccgggc
     4321 agaaacaaaa cggcaatttt ctcgatttaa attaattttt ttgaaatata atttttattt
     4381 ttttatttgt tggcatataa gacttttatg gattgaagta ttaaaacctc ggcacacacg
     4441 ccgcaaacac cggtacgcaa aaatgccgtc tgaaagatgt tcagacggca tttctcaaga
     4501 aaaagattat ttgtccgccc tatatccgta caccgcaaaa aacacgatat acaggtaaca
     4561 gataacggaa acgacaaacg aagacatcag ggtgtaagta tccgccgccc aaccttgaat
     4621 taccggcacg accgcaccgc cgacaatcgc ggtacacagc acaccggaag ccgcgttggt
     4681 gaatttgccc aaccctttgg ttgccaaaga gaaaatcgtc gggaacataa tcgagttgaa
     4741 aaaaccgatg gcaagcagcg accacatcgc cacatccgca ttgccgctgc ccgtcgccat
     4801 cgcgacggca agcagcacga ccgcagccga tgcgttaaac gccaaataac ggttgggcgc
     4861 gaatttcgcc attaccgccg aaccgaggaa acgtccgacc atcgctccgc cccaataaaa
     4921 cgacaggtaa tgcgcggcag aagcatgatc cagccctttc agataaccca acacattgac
     4981 catcagcgaa ccgatagaca cctccgcacc gacgtagcag aaaatgcctg ccgtaccgaa
     5041 cacgagatgt ttgtattgcc atacgccggt tttgccgtcg tggttgtgcg cgctttcctc
     5101 ggcggcaatt ttgcgcgcgt cgggcagccg gatcattttc acgaaaacgg caaggataat
     5161 cagcagcccc gccagtccca aatagggaat ctgtacggaa gaaatctgtt ccgccttgct
     5221 gacggtttgg gttgcgtccg ccaaaatcag gaacgcgccg atttgaggcg caatggtcgt
     5281 acccaaagcg ttaaacgcct gaaccagcgt cagcgttgcc gattccttgc cgggtttcgc
     5341 cagcagggta acataaggat taccggcgac ctgaagcagc gttacgccgg aagccaaaat
     5401 aaacaacgcg cccaaaaata ccgcgtaaga atggctgccc gcagcaggat aaaacagcag
     5461 gcacccgacc gccgtcagca gaaagccgcc gataacgccg tttttgtagc cgactttgcc
     5521 gacaaaagcc cccatcggga tggacattac cgcataggcg gtaaaaaagc aaaattgaat
     5581 cagcatcgcc tgaacgtaag agaggtcgaa aatttctttc aaatgaggga taaggatgtc
     5641 gttcatgcag gtaataaaac ccatcatgaa gaacagcgtg gtcaagacga ccaatgggga
     5701 cgtatggttg ttttgtgatt gcgcagacat gatttgcctt tcgtggtgtc ggaatattgc
     5761 ccgtttcaag aaaatagaaa ttgacatttc ttaacggcaa tgcaaatcat actgatattt
     5821 gaacattttg caaactttat cggatgcagg caatgcgccg atctgaaatt caagcagcag
     5881 aaattaatat tttacagttg tttgcatagg ttttaataga ttttaaaaaa ttccggcggg
     5941 cttgcaaaaa ccgttcccaa taaaatgaaa atcctccgcc gtatccggaa aattcggaaa
     6001 tgccgcatcg gggcatcaaa accggagcgg aaagaatgtc gtatgcccga caaataaagg
     6061 ggcatacggc tgtgccgtat ttttgcaccg tcctccgccc ttcggcgggg gcgtgaaaat
     6121 accgtataat ccgtcgccga tttttacctg tttgggactg tttgcaatga taccctccta
     6181 cacctacgcc gccctcgctt tttccgcctt cacttccgcc accctcctgc ccggcacgtc
     6241 cgaagccgcc ttcgccctgt tcgtccgcaa cttccccaaa cacgcatacg gcgcgttgct
     6301 gtgcgccggc cttgccaacg gattgggcag tatggtttcc tattggatgg gacgtttgct
     6361 gccttcccga aaaatgccgt ctgaaaaaac actgaatctg atacggcgtt tcggtatttg
     6421 gctgcttgcg tttgcgtggc tgcccgtcgt cggcgacgca ctgccgctta ccgccggctg
     6481 gctgcggttg aatccgtgga caagcgggct gatgctggtt atcggcaaaa cggcgcgtta
     6541 cgccttcatt ctgtggggaa tgcaatatta cgccgcctga accgtgcgtt ataatgccga
     6601 ccgcacaaac cgactgcaca aaaaaaatga acagacaaat ccgccaagaa atcttcgagc
     6661 gtttccgcgc cgccaacccc catccgacca ccgagctgaa tttcaactcc cctttcgagc
     6721 ttttaatcgc cgttctgctt tcggcgcagg cgaccgatgt cggcgtaaac aaggcgacgg
     6781 cgaagctgtt tccggttgcc gatacgccgc aggcgatgct ggatttgggc ttggacggcg
     6841 tgatggaata cacgaaaacc atcgggctgt ataaaaccaa gtccaaacac attatgcaaa
     6901 cctgccgcat cctgctggaa aaatacaacg gcgaagtgcc ggaagaccgc gaggctttgg
     6961 aatcgttgcc tggcgtgggg cgcaaaacgg caaacgtggt attgaacaca gcgttcggac
     7021 accccgttat ggcggtcgat acgcatattt tccgcgtgtc caaccgaacc aaaatcgcac
     7081 ccggaaaaga tgtacgcgaa gtcgaagaca aactgatgcg cttcattcct aaagaatttc
     7141 tgatggacgc gcaccactgg ctgattttgc acggacgcta cacctgcaag gctttaaagc
     7201 cgcaatgcca aacctgcatc atcaacgatt tgtgcgaata tcccgccaaa tcctgaccgc
     7261 cgccgccctt caaaatgaaa cgcttgaaaa ttcggacgga cgttgtagaa tttcaaccta
     7321 tgccgtctga agccgacaaa atgcgcttca gacggcatta aagccggtac cggcatccga
     7381 caaaggacaa aacgtgttca aaaaatacca atacttcgct ttggcggcac tgtgtgccgc
     7441 cttgctggca ggctgcgaaa aggcaggcag ctttttcggt gcggacaaaa aagaagcatc
     7501 cttcgtagaa cgcatcgaac acaccaaaga cgacggcagt gtcagtatgc tgctgcccga
     7561 ctttgcccaa ctggttcaaa gcgaaggccc ggcagtcgtc aatattcagg cagcccccgc
     7621 cccgcgcacc caaaacggca gcggcaatgc cgaaaccgat tccgacccgc ttgccgacag
     7681 cgacccgttc tacgaatttt tcaaacgcct cgtcccgaac atgcccgaaa tcccccaaga
     7741 agaagcagat gacggcggat tgaacttcgg ttcgggcttc atcatcagca aaaacggcta
     7801 catcctgacc aatacccacg tcgttgccgg tatgggcagt atcaaagtcc tgctcaacga
     7861 caagcgcgaa tataccgcca aactcatcgg ttcggatgtc caatccgatg tcgcccttct
     7921 gaaaatcgac gcaacggaag agctacccgt cgtcaaaatc ggcaatccca aaaatttgaa
     7981 accgggcgaa tgggtcgctg ccatcggcgc gcccttcggc tttgacaaca gcgtgaccgc
     8041 cggcatcgtg tccgccaaag gcagaagcct gcccaacgaa agctacacac ccttcatcca
     8101 aaccgacgtt gccatcaatc cgggcaattc cggcggcccg ctgttcaact taaaaggaca
     8161 ggtcgtcggc atcaattcgc aaatatacag ccgcagcggc ggattcatgg gcatctcctt
     8221 tgccatcccg attgacgttg ccatgaatgt cgccgaacag ctgaaaaaca ccggcaaagt
     8281 ccaacgcgga caactgggcg tgattattca ggaagtatcc tacggtttgg cacagtcgtt
     8341 cggtctggat aaagccagcg gcgcattgat tgccaaaatc cttcccggca gccccgcaga
     8401 acgtgccggc ctgcaggcgg gcgacatcgt cctcagcctc gacggcggag aaatacgttc
     8461 ttccggcgac cttcccgtca tggtcggcgc cattacgccg ggaaaagaag tcagcctcgg
     8521 cgtatggcgc aaaggcgaag aaatcacaat caaagccaag ctgggcaacg ccgccgagca
     8581 taccggcgca tcatccaaaa cagatgaagc cccctacacc gaacagcaat ccggtacgtt
     8641 ctcggtcgaa tccgcaggca ttacccttca gacacatacc gacagcagcg gcaaacacct
     8701 cgtcgtcgta cgggtttccg acgcggcaga acgcgcaggc ttaaggcgcg gcgacgaaat
     8761 cctcgccgtc gggcaagtcc ccgtcaatga cgaagccggt ttccgcaaag ctatggacaa
     8821 ggcaggcaaa aacgtccccc tgctggtcat gcgccgtggc aacacgctgt tcatcgcatt
     8881 aaacctgcaa taacgcacat aatttaacca aaatattttt aaatgataaa atgcccgtca
     8941 ataccgatta acgggcattt tacaaaaatc agttggttga ttttaaacaa atatttttta
     9001 agacaaaaaa tatttccacc cattttgcca acaaaaccca aaccggaggc ggacagatac
     9061 ccacccatcc ggacgcttaa caccccccat aaaccatgca gctgattgac tattcacatt
     9121 catttttctc ggttgtgcca ccctttttgg cactggcact tgccgtcatt acccgccgcg
     9181 tactgctgtc tttaggcatc ggtattttgg tcggcgttgc ctttttggtc ggcggcaacc
     9241 ccgtcgacgg tctgacacac ctgaaagaca tggtcgtcgg cttggcttgg gcagacggcg
     9301 attggtcgct gggcaaacca aaaatcttgg ttttcctgat acttttgggc attttcactt
     9361 cactgctgac ctactccggc agcaatcagg cgtttgccga ctgggcaaaa cggcacatta
     9421 aaaaccggcg cggcgcgaaa atgctgaccg cctgcctcgt gttcgtaacc tttatcgacg
     9481 actatttcca cagcctcgcc gtcggtgcga ttgcccgccc cgttaccgac aagtttaaag
     9541 tttcccgcgc caaactcgcc tacatcctcg actccactgc ctcgcccatg tgcgtgctga
     9601 tgcccgtttc aagctggggc gcgtcgatta tcgccacgct tgccggattg ctcgttacct
     9661 acaaaattac cgaatacacg ccgatgggga cgtttgtcgc catgagcctg atgaactatt
     9721 acgcgctgtt tgccctgatt atggtattcg tcgtcgcatg gttctccttc gacatcggct
     9781 cgatggcgcg tttcgaacag gctgcgttga acgaagccca cgacgaaacc gccgcttcag
     9841 acgctaccaa aggtcgtgtt tacgcattga ttattcccgt tttggcctta atcgcctcaa
     9901 cggtttccgc catgatctac accggcgcgc aggcaagcga aaccttcagc attttggggg
     9961 catttgaaaa cacggacgta aacacttcgc tggtattcgg cggcacttgc ggcgtgcttg
    10021 ccgtcgtcct ctgcacgttc ggcacgatta aaaccgccga ttatcccaaa gccgtgtggc
    10081 agggtgcgaa atccatgttc ggcgcaatcg ccattttaat ccttgcctgg ctcatcagta
    10141 cggttgtcgg cgaaatgcac acgggcgact acctctccac gctggttgcg ggcaacatcc
    10201 atcccggctt cctgcccgtc atcctcttcc tgctcgccag cgtgatggcg tttgccacag
    10261 gcacaagctg ggggacgttc ggcattatgc tgccgattgc cgccgccatg gcggtcaaag
    10321 tcgaacccgc gctgattatc ccgtgtatgt ccgcagtaat ggcgggggcg gtatgcggcg
    10381 accactgttc gcccatctcc gacacgacca tcctgtcgtc caccggcgcg cgctgcaacc
    10441 acatcgacca cgttacctcg caactgcctt atgccctgac ggttgccgcc gccgccgcat
    10501 cgggctacct cgcattgggt ctgacaaaat ccgcgctgtt gggctttggc acgaccggta
    10561 ttgtattggc ggtgctgatt tttctgttga aagataaaaa acgcgccgac gtttgacctt
    10621 cccccctgtt cagacggcat atgccgtctg aagttttttg gagcaaaccg caatgaccgt
    10681 cccccatatt ccgcgcggcc ccgtcatggc agacattgcc gccttccgcc tgaccgaaga
    10741 ggaaaagcaa cgcctgctcg atcccgcaat cggcggcatc atcctcttcc gccgcaactt
    10801 ccaaaacatc gaacaactca aaacactcac cgccgaaatc aaagccctgc gcacacccga
    10861 actcattatc gccgtcgatc acgaaggcgg cagggtgcaa cggtttatcg aaggttttac
    10921 ccgcctgccc gcaatgaacg ttttagggca aatttgggac aaagacggcg cgtccgccgc
    10981 cgaaaccgct gccggacaag tcggccgggt tttggcaacc gagctttccg cctgcggcat
    11041 cgacttgtcc ttcacgcccg tcttggattt ggactgggga aactgcgccg tcatcggcaa
    11101 ccgcagcttc caccgcaatc ccgaagcggt cgcccgcctc gccctcgccc ttcaaaaagg
    11161 tttggcaaaa ggcggtatga aatcatgcgg caaacatttc cccggacacg ggtttgtcga
    11221 aggggacagc catttggtgc tacccgaaga cgggcgcagc ctcgacgaac tcgaagccgc
    11281 cgacctcgcc cccttccgca ttatgagccg cgaaggtatg gcggcggtca tgcccgccca
    11341 cgtcgtttat ccgcaagtgg acacaaagcc cgcagggttt tccgaaatct ggctgaaaca
    11401 gattttgcgc cgcgatatcg gattcaaagg cgtgattttt tctgacgatt tgaccatgga
    11461 gggcgcgtgc ggagtcggcg gcatcaaaga acgcgcccgc atttcctttg aggcaggttg
    11521 cgacatcata ttggtctgca accgtcccga cttggtcgat gaattgcgcg acggtttcac
    11581 cattcccgac aaccaggatt tggccggacg ttggcaatac atggaaaact cgctcggtca
    11641 tgaggcggta caagccgtta tacagacaac gggtttccaa gcggcgcaag cctttgttgc
    11701 cggccttgcc tcgccgcagg acacggcggg cggcgtaaaa gtcggagagg ccttttaaac
    11761 cggctgcgtt tcaacaatct gccgatttca accgttcgtc agggaaaggc aatgattttt
    11821 tcggtcaaat agaaagttat cttattgaat tactttgaga taaggatgct tatcaatact
    11881 gtattcaaac acagcccttt aaatccgccc gacacgcggc aaaaaggcaa aacggtatag
    11941 gcacgccgta ttttttgcgc tataatcaca ccttaattaa ttcggaatgt agcgcagccc
    12001 ggtagcgcac ttcgttcggg acgaaggggt cggaggttcg aatcctctca ttccgaccat
    12061 attcagaccg cctcgacatc gattgccggg gcggtttttc ccttttggcg gcaacaaaaa
    12121 aatgccgtct gaaacagaat gctgtttcag acggcatttc gttttcccca atcctgccat
    12181 ttgcgcgcac tgacaaaggg tatcggcaag gttcaaaaga ccatcggaat ctaggaagcc
    12241 tggcgtgtac ccaaccgcgg catcttattc attaaggctt cgtcctgatt gggcggcgga
    12301 aatgtcggca gtttcacgcg gaagcggcac actttccccg tatgtcaaac atcggcaaga
    12361 aggtacgcct gccctttggg ttacactgct taaactactc tatccccgcc catttgtgcg
    12421 tctgcacgct caactgccaa tgcacgggcg cgtcggggcg gctgtttaaa ataccgattt
    12481 ggcggatggt gtcgtagatg ttcatcacgc cgttttgttc gcagggagaa agatagtaat
    12541 ggcgcgcacg gattttgcgt tccatatttt cgcaaaacgc aaggacatcg ccgtcggcaa
    12601 caatccgtac ttcgtcggct tcggcgatgc agttggtttc atacttggcg gcgtagcagg
    12661 ctttggggct ggtggcgaca tagtcgattt gcggcggcgc gggcttgagc ccgttggttt
    12721 cgagacagag gaaatagcct tccgccttga gcgtgtccag cagcatatcg agatgcggct
    12781 ggatggtcgg ctctccgccg gtgatgatga tgttgcgggc ggcataagtt ttcagacagc
    12841 ctaagatgtc ggacaggctc atcataccaa atgtcaaata atcggtatca caccagccgc
    12901 acgccagatt gcatttgccc aagcggacga aaacggcagg catacccgtg tttcggccct
    12961 caccttgcag gctttcaaag atttcgacga tgcggtactg gggattttcg ggggcgacgc
    13021 tgattttttt cataccgcca acaccgccgc cgccaaaaat gcgggcaaac cttgtttgac
    13081 gagtatgcct ttgttgccgg acgaaaacgc accccacgcg gcggcaatca ggacgaagcc
    13141 gagaaacagt accgtcgcgc cgtacacggc attatccgga gcggcaaact gcgcccacaa
    13201 aagcccgacg gcaagaaagc cgttgtacag cccttggttg ccaaacaggg tctgcacgcg
    13261 tttctgttcc ataaattcgt aaggcagctt gaacatttcc gccgcttttt cgccgggaat
    13321 ctgcgtcatt tcaagccagg cgatgtagaa atgttcggcg gcgacgagga ggacgagaat
    13381 ggtggagagg agtttcatgg gtgttccttt caatgggtgt gccggtatga aatgccgtct
    13441 gaaaaaacgg ggaatccgtg caggagaaaa aaccgcttta cggtatagtg gattaacaaa
    13501 aatcaggaca aggcggcgaa gccgcagaca gtacagatag tacggaaccg attcacttgg
    13561 tgcttcagca ccttagaaa
//
LOCUS       DAWXHA010000063        13331 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.063, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000063 DAWXHA010000000
VERSION     DAWXHA010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13331
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.063"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(132..320)
                     /locus_tag="AABD07_001364"
                     /pseudo
     CDS             complement(132..320)
                     /locus_tag="AABD07_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557963.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(397..864)
                     /locus_tag="AABD07_001365"
     CDS             complement(397..864)
                     /locus_tag="AABD07_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HFB2355879.1"
                     /translation="MPSEHQPQSKGNKMAILKLDEHLYISPQLTKADAEQIAQLGIKT
                     VICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEY
                     PVLAYCRTGTRCSLLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(890..2638)
                     /locus_tag="AABD07_001366"
     CDS             complement(890..2638)
                     /locus_tag="AABD07_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HFB2355880.1"
                     /translation="MIHYKIAPSPLDHEWHILLKFTQDNDFPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHTAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPPEWRIATTLPETGRLVFQTASYDELIDRP
                     VEMGLIEFLDFEAAGIPHTIALNGIYPDFDRDRLVSDIKKICETELAMFSSPAPFEKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDAYTTLLGLFSHEYFHAWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPEFYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTVMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLTDFFQTALYSTEDLPLAEC
                     LATTGVKLTFLPLPRQHGGGYAEHIFPIPPTGDFGARFKQNADHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFAAQWARYHVRAKINIHFFRAGILRQTVLTVQATAADTA
                     ILHITDRNLLENWLFG"
     gene            2952..4397
                     /gene="ccoN"
                     /locus_tag="AABD07_001367"
     CDS             2952..4397
                     /gene="ccoN"
                     /locus_tag="AABD07_001367"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HFB2355881.1"
                     /translation="METLMDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPA
                     LDLSNIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTF
                     WGWQAVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKVKHI
                     YVANWFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLT
                     AGFLGMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGM
                     VLSLILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKT
                     VNALSHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIAT
                     IGVVLYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYMIRFAGGLLYLSG
                     MCIMAYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4424..5035
                     /gene="ccoO"
                     /locus_tag="AABD07_001368"
     CDS             4424..5035
                     /gene="ccoO"
                     /locus_tag="AABD07_001368"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HFB2355882.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            5040..5210
                     /locus_tag="AABD07_001369"
     CDS             5040..5210
                     /locus_tag="AABD07_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HFB2355883.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDDAANSIFAE
                     NQDAQDKKSENR"
     gene            5234..6553
                     /gene="ccoP"
                     /locus_tag="AABD07_001370"
     CDS             5234..6553
                     /gene="ccoP"
                     /locus_tag="AABD07_001370"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HFB2355884.1"
                     /translation="MNATSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPKGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSNKDGKAPVKKAEPAPAAEPAPSAPAEAAQ
                     AASEAKPAAAEPKAEEKAAPAAKADGKQVYETVCAACHGNAIPGIPHVGTKADWADRI
                     KKGKDTLHKHAIEGFNTMPAKGGRGDLSDDEVKAAVDYMVNQSGGKF"
     gene            6570..6788
                     /locus_tag="AABD07_001371"
     CDS             6570..6788
                     /locus_tag="AABD07_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355885.1"
                     /translation="MSDAEIRIHIESGFFILNGNPVFDLCRLKVGILMLKQSDRLIFL
                     YGLKNGAVGCRTALFDAFRRHIGLFLQN"
     gene            6897..8306
                     /locus_tag="AABD07_001372"
     CDS             6897..8306
                     /locus_tag="AABD07_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFB2355886.1"
                     /translation="MDTQIKTEAGQQNNRHYLSVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVFPQAVVQPLSVQAEAARGAINPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVNTMPRNQGWYHTMDEIHGDMMLGAAGDYLLETAASL
                     TIIMVVSGLYLWWAKQRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWILELTPMPVS
                     GTTVGENGINPSEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVVFCLAV
                     IFIGISGCVMWWKRRPSGVAGIVPPAQKIKLPVWWAMALPLLLIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRKWFK"
     gene            8407..11616
                     /gene="recC"
                     /locus_tag="AABD07_001373"
     CDS             8407..11616
                     /gene="recC"
                     /locus_tag="AABD07_001373"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HFB2355887.1"
                     /translation="MFYLYQSNRLESLAALFARIQKVKPLKCALQPEQIVVQSQGMRR
                     YLNTCLARDLGVAANLAFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSA
                     EFQNGAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMHWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIEPYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPFFYALECVSDLLESRFEVGKVLALLETAPVLRRFGLTGDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAADRMILGWMLPEGGNPMWQDVSAWYADV
                     NQTAMFGRFAAFLETLSDIARIWRQPATVGEWVARCRDLLETLFQAGPDDQKAVQNLE
                     NEWVKWQEESTLAGFFGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLVAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPRPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHAEQIAETYIGARREGQDFSQTAARIAAESLLPSG
                     ELGKLWQQSFQTAAKQIDTAVLNSPKLPPFPYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVKSGETEVLAEIAQDRALQLLSEWI
                     VFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKREGTGEA"
     gene            complement(11686..13254)
                     /gene="mtrF"
                     /locus_tag="AABD07_001374"
     CDS             complement(11686..13254)
                     /gene="mtrF"
                     /locus_tag="AABD07_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HFB2355888.1"
                     /translation="MSQTDARRSGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAVI
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTLDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVTSTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVAGSPFLKSIVVFIFLLFALPGIVYGRIT
                     RSLRGEREVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGAVFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPVP"
BASE COUNT         3264 a         3268 c         3563 g         3236 t
ORIGIN      
        1 accgtctcca tttctgcgca ggcgggaata caaacatctg atttttcttt tattttcaaa
       61 cattactgaa atgggtaagt ctggagtcct gcctgcgcga gaataatgaa aatgtgcatt
      121 tctaattttt atagtggatt aacaaaaatc aggacaaggc aacgaagccg tagacagtac
      181 aaatagtacg gaaccgattc acttggtgct tcagcacctt agagaatcgt tctctttgag
      241 ttaaggcgag gcaacgccgt actggttttt gttaatccgc tatacccgct gtaaaaacgg
      301 agaaggacag aggacggcag taaggtttgc cgtcctcttt ttcaagttgc ggtggaatgc
      361 cgcttgaagg tgtggtttaa acgtttcggc ttgtaatcag acgcgggcgt tgtccagccg
      421 ctctctgaag ttttccagat tcacacctgc cgcttgggcg cggcggatga tttcgtcaac
      481 cggcatacct tctgccgccc ggcggaagcc ccacaggagg gagcagcgcg taccggtccg
      541 gcaataggca aggacgggat attcggcttg tccgatgagt tggcggaagg tttcgacatc
      601 gtgtttttgg atgtcgcgtg cggtaacggg ttggtgatgg aatccggtaa cgcctgcttg
      661 ttccagccac tgtttgattt gggcgaagtc gggttgcgat tcttcttcgc ggtcggggcg
      721 gttgcagatg acggttttga tgccaagttg cgcgatttgt tccgcatcgg ctttggtcag
      781 ttgcggggag atgtagagat gttcgtcaag tttgagaatc gccattttgt ttcctttgct
      841 ttgcggttgg tgttcagacg gcattttgtg tgcaatgccg tctgaaagtt taaccgaaca
      901 accagttttc caacaggttg cgatctgtga tgtgtaggat ggcagtatcc gccgccgttg
      961 cctgaaccgt caagacggtt tgacgcaata tgcctgcacg gaagaagtgg atattgattt
     1021 ttgccctgac gtggtatcgg gcccattgtg cggcaaagtc ggtgcaggca taaccgtcta
     1081 aagcaatgat tttgtcttgc gggcacagtg ccgcagattc cgcacttccg ccgttgaaga
     1141 catgggtcag gacgatatgg tcggcgtttt gtttgaagcg tgcgccgaaa tcgcccgtcg
     1201 gcgggatggg gaaaatgtgt tccgcatatc cgccgccgtg ttgtcgggga agcggcagga
     1261 aggtcagttt cacgcctgtg gttgccaggc attcggcaag cggcaaatct tcggtgctgt
     1321 acaatgccgt ctgaaaaaaa tctgtcaaat ccaagccggt aatttcctga caacggattt
     1381 gccagtgttt ttccggaata cccgagtgtg tgtccctcca ctcccgatag agtttgtcca
     1441 ttaccgtatc aagggaatgt ctgccgttgc ttcggttgcg tattatcaga tcaaggcaca
     1501 atgcggcaag tgcgcctttt tggtagtagc tgacgatggc gttggggctg ttttcatccg
     1561 gtttgtaaaa tttgttccac gcggtaaaac tcgattccgc caaggtctgc ctcaaacggc
     1621 cgcgggtttg ttgtacgcgc gtaatgcctt gtgctagcag gtttaaataa aattcgggcg
     1681 agatggtgcg gctgcgtgcc aaaaacaaat cgtcgtaata ggatgtaatg ccttcgaatg
     1741 cccatagttg ttcggtatag ttttctttgt cgaggtcata aggggcgaat gcggcaggtt
     1801 tgatggattt gacgttccac gcgtgaaaat attcgtggga gaaaagtccg agcaatgtgg
     1861 tgtaggcatc gtcggcatcg gtcataccgt acggcggaag gctgtggcga tcggcgagca
     1921 gtgcggtgct gtcggtgtgt tccaaaccgc cgtaaatatg gtcgccgacg tggagcagga
     1981 acaaatattt ctcaaatggg gcaggggagg agaacatcgc cagttctgtt tcgcagattt
     2041 ttttgatgtc cgaaaccagc ctgtcgcggt cgaaatcggg atatatgccg tttaaggcaa
     2101 tcgtgtgcgg aatgcctgcc gcctcaaaat ctaaaaattc aatcaagccc atctcgacag
     2161 gtcggtcaat caattcgtca taagatgccg tctgaaagac aagcctccct gtttccggca
     2221 gcgttgtggc aatacgccat tcgggtggaa tgcctgtcaa ttccaagcgg tgcggcagcg
     2281 tttccgttcc ttcgactttc aaaaacaggc acgatccgtc aaaaaaaccg cgttctgtcg
     2341 tcaggaaaga acctcgaacc gacaaatcga atgcatatac ggtgtagcgg atttgccact
     2401 cgccgcgtac ggcggcagtg tgccagcggt tttttgcaat ttgttcgagc ggcatggacg
     2461 tgccgttgca ggatgcatgg atagaagtga tgtggcggga aaaatcccga atcagatagc
     2521 tgcccggcac ccaattcgga aggcttattt ctataggaaa atcattatct tgtgtgaatt
     2581 tcagcaggat gtgccattca tggtctagag gggacggggc tattttataa tgaatcataa
     2641 ctatcaaata tatcgttaaa cgggatggat taaatgcctt taaaatgcag cttaacctac
     2701 atcaataaag tgccacaaaa agggaaaatt ggaaacaaaa gcaatggcgg ccgggttgta
     2761 atttattata acaatatgat ttatatgtaa taaaaaacag attaagcaaa gggttcgccg
     2821 gcggcgcgaa tgtaattccg cttggcgtaa taaggcagat atgttaaatt tagaaaaaat
     2881 tacgcttgcc cggattgcac cttaaacagg ctgcggaagc ggcaggataa aaatctttat
     2941 tcccataatt catggagact ctcatggaca cacaaactta caactacaaa gtggtgcgcc
     3001 agttcgccat catgactgta gtttggggga ttgtgggcat gttggtcggc gttatcgtcg
     3061 ccgcccagct ttttgctcct gccctcgact tgtctaatat cggaccttgg ttccacttcg
     3121 gccgcctgcg tccgctgcac accaatgcgg ttattttcgc atttggcggt tgcggtctga
     3181 tcggcacatc atactacgtt gtccaacgta cttgtaatac ccgtcttttc ggcggttggc
     3241 tgccggcatt taccttttgg ggttggcagg cggtaatcgt tgccgccgtc gtcagcttcc
     3301 ctatgggttg gacccaaggt aaggaatatg ccgaactgga atggccgatt gacattctga
     3361 ttactttggt ttgggtggct tacgccatcg tattcttcgg tacgattgcc aaacgcaagg
     3421 taaaacacat ttacgttgcc aactggttct acggcggctt tattttggcg gtcgcacttt
     3481 tgcacatcgt caacaatatc agcatcccgg ccggtttgat gaagtcatac cccgtctatt
     3541 ccggtgcgat tgatgctatg gttcaatggt ggtacgggca taacgccgtg ggcttcttcc
     3601 tgactgccgg ctttttgggt atgatgtact atttcgtacc caaacaagca gcccgccccg
     3661 tttactccta ccgcctgtcc gtcgttcact tctgggcgtt gattttcacc tatatgtggg
     3721 cgggtccgca ccatcttcac tacactgcgc tgcctgactg gacgcaatct ttgggtatgg
     3781 ttctgtcctt gattttgttc gcaccctctt ggggcggtat gattaacggc attatgacct
     3841 tgtccggcgc gtgggacaaa ctgcgtacag acccgattct taaattcctg attgtatcct
     3901 tgtccttcta cggtatgtct acctttgaag gcccgatgat gtcgattaaa acggtcaatg
     3961 cattgagcca ctatacggac tggaccgtcg cgcacgttca tgcgggtgcg ttgggctggg
     4021 taggctttgt aaccatcggt tccgtctatt acatgattcc ccgtctgttc ggcaaagagc
     4081 agatgcacag caccaagctg gtagaggcgc atttctggat tgcgactatc ggtgtggttc
     4141 tgtatatcgc cgcgatgtgg attgcaggtg tgatgcaggg tttgatgtgg agttctctga
     4201 acgatgacgg tacgctgacc tactcgtttg tcgaatccgt aaaacgcacc atgccttact
     4261 acatgatccg ttttgcaggt ggtttattgt atctgagtgg catgtgcatt atggcgtaca
     4321 acgtgtaccg cacagccatc ggtggtaaag cagtcgatgc cgaaatccct gcggtttccc
     4381 aaacacagca ccactaaaat actaagaaag ataggctacc aaaatgaaat tacaacaatt
     4441 ggctgaagaa aaaatcggcg ttctgattgt gttcacgctg cttgtagtca gtgtcggtct
     4501 gttgattgaa gttgtgccct tggcctttac caaggcggca acacagccgg cgccgggcgt
     4561 gaagccttac aatgccctgc aggttgccgg acgcgatatt tacatccgtg agggctgtta
     4621 caactgccac tctcaaatga ttcgtccgtt ccgtgcggaa accgagcgtt acggtcatta
     4681 ctctgttgct ggagagtcgg tttacgacca tccgttccaa tggggttcca aacgtaccgg
     4741 tcctgatttg gcacgtgtgg gcggccgcta ttccgacgaa tggcaccgca tccacctgct
     4801 gaatccccgt gatgtcgtgc ctgagtccaa tatgccggca ttcccgtggc ttgcacgcaa
     4861 taaagtcgat gtcgatgcaa ccgttgccaa catgaaggct ttgcgtaaag taggtactcc
     4921 ttacagtgat gaggaaattg cgaaagcgcc tgaggctttg gcaaacaaat ccgagctgga
     4981 tgctgtagtc gcctatctgc aaggattggg tctggctttg aaaaacgtaa ggtaacatca
     5041 tggatattaa cggtattcgc gctcttttca cggtatggat ctttatctgt ttcctgttag
     5101 tactctatat cgtcttcaac aggcggaata agaaaaacta cgatgatgcc gcaaacagca
     5161 tttttgctga aaaccaagat gcgcaagata agaaaagcga aaaccgttaa tattgtgata
     5221 acggagcaaa acaatgaacg caacatccca atttaccagt aatttctgga atatatatat
     5281 tgcagttatt gtcttactga gctttatcgc tttggcttgg ctgctgctgt ctcaaaatgt
     5341 tgtcaaacgt ccgaagaagg gcgaagaagt acaaactacg ggtcacgagt gggacggcat
     5401 tgccgaatac gacaatccgc tgccccgctg gtggttttgg ctgtgtgttt tgacgtggct
     5461 gttcggtatc ggttatctgg ttatgtatcc gggtgtcggc gactacaaag gtctgctgaa
     5521 atggaccagc cataaccaat atgaaaaaga ggtcaaaaaa gccgatgagc aatacggcaa
     5581 actgtatgcc aagtttgcgg atatgccgat tgaaaaagtg gcaaaagacc cacaggccaa
     5641 gcaaatcgcc caaaacctgt ttaacactta ttgtatccag tgccacggct ctgatgccaa
     5701 aggttctaaa ggttttccga atctgaccga tagcgattgg ttgtggggcg gcgatcccga
     5761 taaaatccac gagaccatcg aaaaaggccg tgttgcgact atgcctgcct ggggtcctgc
     5821 tttgggcgaa gaaggcgtga aagacgttgc ccattatgtg atgtcccttt caaaacccaa
     5881 aggtcagtat gatgaggaac gtgccgcgcg cggacaagcc ttgttcagcg gtccgcctgc
     5941 caactgtttc acttgccacg gcgataaggg acaaggtatc caaggtttgg gtccgaacct
     6001 gactgatgac gtgtggttgt ggggcggtac gcaaaaatcc attatcgaaa ccattaccaa
     6061 cggtcgcagc agccaaatgc ccgcttgggg acatttcttg gataaagaca aactgcatat
     6121 catgactgct tatgtatggg gtctttccaa taaagacggt aaagctccgg tgaaaaaagc
     6181 cgagcctgca ccggcggcag aacccgcacc atctgctcct gcagaagcag cacaagccgc
     6241 ttctgaagcc aaacctgccg cagcagaacc taaagccgag gaaaaagccg cacctgccgc
     6301 caaagcggat ggcaaacagg tttatgaaac cgtttgtgcc gcctgccatg gcaatgcaat
     6361 tccaggtatt ccccatgtag gcaccaaagc cgactgggcc gaccgcatca aaaaaggtaa
     6421 ggacacgttg cacaaacacg cgatcgaagg ttttaatacg atgcccgcaa aaggaggtcg
     6481 cggcgatttg agcgatgatg aggtcaaagc tgcggttgac tatatggtca accagtcagg
     6541 cggtaagttc taaccgttgt tttccgactt tgtcggatgc agaaatccgg attcatatcg
     6601 aatccggatt ttttattttg aacggaaatc ctgtttttga tttatgccgt ctgaaagtgg
     6661 ggattttgat gcttaagcag tcagaccgac tgatattttt gtatggttta aagaatggtg
     6721 cagttgggtg tcggacagca ttgtttgatg ctttcagacg gcatataggt ttgtttcttc
     6781 aaaattgaat cttttttcat atgttgcaaa aaaattgatt ttagtcataa agaattagtc
     6841 tttattgttt ataatcgcgc atcatcacga tagccttaat ttcaaaagga cgattaatgg
     6901 atacacaaat caaaactgaa gccggtcagc agaataaccg gcattatctg agcgtttgga
     6961 ggtggcattt ttatgccggt ttattggtta tgcccttctt gaccctgctt gccgttacag
     7021 gtttgggtat gctgttgttt gccaatatta ccggtaaaga gggagagcgt attcacgttt
     7081 tccctcaggc agtggtgcaa cccctctctg ttcaggcaga agcggcacgc ggtgccatta
     7141 atccggagac ttcgtccgtc gtccaatata ttgcaccgcg tgccgatgat atggttgctg
     7201 tgttccgtgt caacaatgag ggtaaggcaa ccatggttgc ggtcgatcct tatacggcaa
     7261 aagtggtcaa caccatgccg cgcaatcagg gttggtatca cactatggat gaaatccacg
     7321 gcgatatgat gctcggtgcg gcaggcgatt atcttttgga aacggcagct tcactgacca
     7381 ttattatggt tgtcagcggc ttgtaccttt ggtgggcgaa acagcgcggc attaaagcga
     7441 tgctgctgcc gccaaaaggc agggcgcgtt cttggtggcg gaatctgcac ggcgcgtttg
     7501 gaacttgggt atcgttgatt ttactgttgt tctgcctgtc gggtattgct tgggcaggta
     7561 tttggggcgg caagttcgtg caggcttgga gtcagttccc ggccggcaaa tggggtgtcg
     7621 aaccgaaccc cgtttcagtc gtgccgaccc acggcgaggt attgaatgac ggcaaggtta
     7681 aggaagtgcc gtggattttg gagcttacgc ctatgcctgt ctcagggacg actgtgggtg
     7741 aaaacggcat taaccccagc gagccgatga cattggaaac cgtcgaccgt ttcgcgcggg
     7801 aaatcggttt caaagggcgt tatcagttga atttgcccaa aggcgaggac ggggtatgga
     7861 ctttgtcgca ggattctatg agttatgaca tgatcagccc gtttgccgac cgcacggtgc
     7921 atatcgacca gtacagcggc aagattcttg ccgacatccg ttttgacgat tacaacccgt
     7981 tcggcaaatt tatggcggca agcattgcgc tgcatatggg gactttgggc tggtggagcg
     8041 tgttggcgaa cgtcgtgttc tgccttgccg tgatttttat cggcatcagc ggctgcgtga
     8101 tgtggtggaa acgccgtccg tccggcgtgg cgggcattgt tcctccggcg caaaaaatca
     8161 aactgcccgt ctggtgggcg atggcattgc cgctgctgtt gattgcactg cttttcccga
     8221 ccgcgctgct tgccattgcc gtgatttggc tgttggatac cttgctgctg tcgcggattc
     8281 ctgtgttgag gaaatggttt aaatgacccg atgccgtctg aagcgttcag acggcatttt
     8341 gtttgcgggc ggcttgcccg agaagctata taattccgca tcactgtcat tttgaaaaag
     8401 caagccatgt tttacctgta ccaatccaac cgcctcgaat cgctcgctgc actgtttgcc
     8461 cgcattcaaa aagtcaaacc gctgaaatgt gccttgcagc ccgaacagat tgttgtgcag
     8521 agccagggga tgcgccgcta cctcaacacc tgcctcgccc gcgatttggg cgtggcggcg
     8581 aatttggcgt tcagcctgcc cgccggcctg acgtggaagt tgatgaaaaa actgattccc
     8641 ggtattccgg aactcagccc gtttgcaccc gaagtcatgc gctggcggct gctggatttg
     8701 ttccgcagcg cagaatttca aaacggagcg gaatttgaag atgtgaggaa tgtgctgcaa
     8761 gactatctgg gcagcggaga atcggcggat taccagcttg cgggacagct tgcagacata
     8821 ttcgaccaat acctcgtgta ccgtcctcag tggatagacg cttggcagca gggcaggata
     8881 ctcggtttgg gcgacgacga aatctggcag tccaaactgt ggcgttacct cgacgacggc
     8941 aggcagagcg cgccgcaccg tgtcgcgttg tgggaaaaac tgcttgccgc gttggacaag
     9001 gataagctgc ccgagcgtta tttcgtgttc ggcatttcca cgatggcgcc gatgtatttg
     9061 cagcttttgc acaagctgtc cgaacattgc gacgtgttcg tgttcgcact caatccgagc
     9121 gggatgcatt ggggcaacgt catcgaagcg gcgcaaatcc tcaaaggcgg cggcgatccc
     9181 gatctgacgc aggcagggca tccgctgctt gcctcattgg gcaagcaggg gcgcgacttt
     9241 ttcgactttt tgaacgaaat ggaaatagaa ggcgaaacgc cggtatttga agaaggcgga
     9301 cgcgatacgc ttttgcacgc cctgcaaacc gatattcaaa acctgaaaat gccgtctgaa
     9361 aatgtgggaa gcgtcaacac gggcgacggc tcgatacgca tcgtctccgc acacagccct
     9421 ttgcgcgaat tgcagatact caaagacaag ctgttgaaaa ttctgcatga acatcccgat
     9481 tggcagccgc atgatatcgc cgtattaacc ccgaacatcg aaccctatac gccttttatc
     9541 gaagccgtgt tcggacaggc gcagcccggc gcgcaggcat tgccgtattc cgtttcggac
     9601 gtgaaaatca gccgccggca accgtttttt tatgcgttgg agtgcgtgtc cgacttgctg
     9661 gaaagccgtt ttgaagtcgg caaagtgctc gcgcttttgg aaaccgcgcc cgtgttgcgc
     9721 cgtttcggac tgaccgggga cgatttaccg cttttgcacg acatggttgc cgatttgaac
     9781 gtccgctggg gtttggacgg agaaatgcgc ggcggcacgg atcagctgtt tacctggaag
     9841 caggcggcag accgtatgat attgggctgg atgctgcccg aaggcggcaa cccgatgtgg
     9901 caggatgtca gcgcgtggta tgccgacgtg aatcaaaccg ccatgttcgg acgttttgcc
     9961 gccttcctcg aaaccctgtc ggatattgcc cggatatggc ggcaacctgc gacggtcggc
    10021 gaatgggtgg cgcgttgccg ggatttgctt gaaacattgt ttcaagccgg gcccgatgac
    10081 caaaaggcag tccaaaacct cgaaaacgaa tgggtcaaat ggcaggaaga gagcactttg
    10141 gctgggtttt tcggacagtt gccgcaacaa accgtcatcc gccatatccg ccgcttcctc
    10201 gacagcgaaa gcgaggcagg ctttttacgc ggcggcatca ccttttgcag tatggtgccg
    10261 atgcggagcc tgccgttcaa agtcatctgc ctgttgggtt tgaacgacgg agattttccc
    10321 cgcaatacca aagccgccgt attcgacctg gttgccaaac atcccgccaa aggcgaccgc
    10381 gcccgccgcg acgacgaccg ctacctgttc ctcgaagccc tcatcagcgc gcgcgaaatc
    10441 ctgtatttgt cctacatcgg gcgcgacatc cgcaaagacg aagagcttgc cccgtcttcc
    10501 ctgttgggcg aactcatcga cacagttgcc gccatgaccg gcacaaacag ccgccaactt
    10561 gcacaaaatt ggatagaaca gcatccgctg caagccttct cgcgccgata tttccaagaa
    10621 ggcggacgtt cagacggcat attcggcacg cgtaccgact acgccgccgc gctcggacaa
    10681 acgcccgaac cgccgcgccc ttttttcgac caacccgtag aaaacgccga acccgttgcc
    10741 gaaatcggac aggacgaatt tatccgcttc tggcgcaacc ccgtcaaagt atggcttcag
    10801 cagcagcttg cgtggagcga accccatatc ggcgaagcct gggagcctgc cgaacccttc
    10861 gagccgcaac acgcggagca aatcgccgaa acctatatcg gggcgcgccg cgaaggacaa
    10921 gatttttccc aaaccgccgc ccgtatcgcg gcggaaagcc tgctgccttc cggagaattg
    10981 ggaaaacttt ggcagcagtc cttccaaacc gccgccaaac aaatcgacac ggcggtttta
    11041 aacagcccca aactgccccc gtttccatac gccataccgt cggacgggca aatcctgaaa
    11101 ggcagcttgg gcaatctgta ccgctgcggt caggtgtttt atgcctacgg caaacccaat
    11161 gcgccgcaac gtatcgcttt tttgttggaa cacctgatat tttgcgccgt tatgccgtct
    11221 gaagccgaaa cgcggcaaac ctttatcgtc aaatccggag aaaccgaagt attggcggaa
    11281 atcgcgcaag acagggcatt gcagctgttg tcggaatgga ttgtattttt caatatcggg
    11341 caaaaccgcc cgctgccgtt ttttgccaaa acctcgcttg ccgccgccga agcgtttgcc
    11401 caaaaacaag attgggaagc cgccctgaaa aaagcccaaa ccgcctatta cggcagcaaa
    11461 gtcagcaaag ggcagaaaga ctataccgaa gtcgccctcg tgttcggcaa cgcaagccaa
    11521 aacccgctcg aacagcccct gtttgaaaac ctcgcccgcc tgctcgccga cacacttgcc
    11581 gcagcggaaa agagggaagg gaccggagaa gcctgacggg atggaaaggc aaataccgtc
    11641 tgaaaacaga aaaaaggttt tcagacggta ttttgtttat cgtgtttaag gcaccggata
    11701 gaatgtgggt gcgccgggac cgacgggcag gcccaaaaca aatacccaaa tgcagaataa
    11761 ggcgatccat gcaattaaga agaaagcgga atacggcaac atcatagaaa tcagcgtgcc
    11821 tacgcccgca tcttttttgt atttgattac cgtcgccata atcagcccga aataactcat
    11881 catcggcgta ataatattgg taacggaatc accgatgcgg taagcggctt gaatgacttc
    11941 gggcgcgtag ccggccaaca tcagcatagg gacgaaaatc ggcgcagtta ccgcccattg
    12001 cgcggaagcg gagcctatca tcagattgat aaaagcacaa attaaaataa aaccgataaa
    12061 caacacactg ccgcccaagc cgacttcttt taagaacacc gcccctttaa cggcaatata
    12121 ttgcccaata ttcgtccaat taaaaaatgc gacaaactgt gcggcaaaaa agatgatgac
    12181 caaataaagc cccagagtac tcatcgattc ggccatcgca ttaacgactt cccgttcgcc
    12241 gcgcaaactt cgggttatcc ggccataaac aatgcccggc agcgcaaaca acaagaaaat
    12301 aaaaacaaca atcgatttta aaaacggcga accggcaacc aatcctgttt caggatgacg
    12361 caaaataccg tcggcaggga cgatgctcca agccaatagg gcggataagg caacaaacac
    12421 cacgcctgcc caaattaatc ctttatattc caaaggcgtg atttcattgg aatgccgaat
    12481 gtctttttct tcttgtgaca aatctgactg ataagggccc aattgcggtt cgacgatttt
    12541 ttcagtaaca aaataaccaa tcaaagcaat cacaaacgta ctggttacca taaaaaacca
    12601 gttggcttca gggcctacga cgtagtcggg atggatgatt tgcgccgcct gttgggtaat
    12661 gcctgccaag agcggatcga gtgtgcctaa gaacagattg gccgaataac cgccggaaac
    12721 gccggcgaaa gccgcagcca gaccggcgag aggatggcgg ccgagcgaat gaaagatgac
    12781 ggcggacaaa gggattagga cgacatagcc caattcagaa gccgtattgg ataaaatccc
    12841 tgtaaaaaca accataaaag tagtgagttt gcgtggggat tttgtgagca ataagcgcat
    12901 taatgcggaa atcaagcccg atttttccgc aatccccacg cccaataaag aaaccaacac
    12961 cgttcccaac ggcgcgaaac cggtgaaatt tttaacggta tgcgtcagga ttttgatcaa
    13021 accgtcggca tcgagcaggc tgacaacgtg aatcaaaccg tcatcggcac gtcctttcgc
    13081 cccaacagga cgcggatcgg ggacggatag tccgaaatac gcaccgacgg cagaggcaat
    13141 cagcaataac acaatgaaaa taataaaaag cgtaaccggg tgcggcaaca tattgcccag
    13201 ccattcgact gtgcgtaaaa atcgtccgct acgacgcgcg tcggtttgac tcatctgctt
    13261 ctccttaaaa aaatatattg agtgcattaa atttttgaat ttaacatgaa gtgttttgta
    13321 agcaaactaa a
//
LOCUS       DAWXHA010000064        13202 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.064, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000064 DAWXHA010000000
VERSION     DAWXHA010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13202
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.064"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(205..690)
                     /gene="purE"
                     /locus_tag="AABD07_001375"
     CDS             complement(205..690)
                     /gene="purE"
                     /locus_tag="AABD07_001375"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HFB2355889.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFEYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAISMLANENPELAQKLADFRAKQEQTVLNMELEQ
                     I"
     gene            complement(738..1451)
                     /locus_tag="AABD07_001376"
     CDS             complement(738..1451)
                     /locus_tag="AABD07_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFB2355890.1"
                     /translation="MKTKLPLFIIWLSVSASCASVSPVPEGSRTEMPTQENASDGIPY
                     PVPTLQDRLDYLEGKIVRLSNEVETLNGKVKALEHAKTHPSGRTYVQKLDDRKLKEHY
                     LNTEGGSASAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGDGGSIAQRSMYLL
                     LQSRARMGNCESVIEIGGRYANRFKDSPTAPEVIFKIGKCQYRLQQKDIARATWRSLI
                     QTYPGSPAAKRAAAAVRKR"
     gene            complement(1451..2119)
                     /locus_tag="AABD07_001377"
     CDS             complement(1451..2119)
                     /locus_tag="AABD07_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HFB2355891.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKAGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEIGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAAFDAPPSVKILKDFNQNLPNDTRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(2130..2315)
                     /locus_tag="AABD07_001378"
     CDS             complement(2130..2315)
                     /locus_tag="AABD07_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HFB2355892.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELAQERLKNRGLLWDVELNPEEQK
                     NFESAKVAKKPYTYYQD"
     gene            2459..4435
                     /gene="mutL"
                     /locus_tag="AABD07_001379"
     CDS             2459..4435
                     /gene="mutL"
                     /locus_tag="AABD07_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HFB2355893.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVD
                     VELEGGGIRLIRVGDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSGNSALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLELPPKAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTE
                     SVSNAGEVLHDITGVTPAPMPSENDSENLFDSASNHPTGNKPDTRNAFGSSGKTAPMP
                     YQAARAPQQHSLSLRESRAAMDTYAELYKKTDDIDLELSQFEQARFGNMPSETPAHKT
                     DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGNLQSQHLLIPVTFAASHEECAALADHAETLAGFGLELSDMGGNTLAVRAAPVML
                     GKSDVVSLARDVLGELAQVGSSQTIASHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDTLFLRGQ"
     gene            4530..6653
                     /gene="dnaX"
                     /locus_tag="AABD07_001380"
     CDS             4530..6653
                     /gene="dnaX"
                     /locus_tag="AABD07_001380"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HFB2355894.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYDPPALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAV
                     GFDNALGELAILLQQLALIQAVPSALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLGLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPEADAAQTPVQTASAAAMPSEGKTAGPVSHQENNDVPPWEDAPDKTETAAGTA
                     RTSAKSIQTASEAETPPENQVSKNKAADNETEASLSEVPSENPIQATPNDEAVETETF
                     AHEAPAEPFYGFPDNDCPPEDGVEIPPPDWANVLPADTAGGGTDEEAEAGGIGGNNTP
                     SAPPPEFSTENWAAIVRHFACKLGAAQMPAQHSAWTEYRSDTGLMVLAMTAEARATAD
                     KKRLDKIRDTLAQAYGLQLTLQTEDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADP
                     AAQKILQAFGAQWQPESLELAANRP"
     gene            6734..7069
                     /locus_tag="AABD07_001381"
     CDS             6734..7069
                     /locus_tag="AABD07_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HFB2355895.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQDL
                     PPGVGDFFR"
     gene            complement(7722..8768)
                     /gene="recA"
                     /locus_tag="AABD07_001382"
     CDS             complement(7722..8768)
                     /gene="recA"
                     /locus_tag="AABD07_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HFB2355896.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            8968..9732
                     /locus_tag="AABD07_001383"
     CDS             8968..9732
                     /locus_tag="AABD07_001383"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HFB2355897.1"
                     /translation="MHTSLTVKNTVIGSGRTKIAVPLVARDAADLSSVLSQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQAVRDALPDKPLLFTFRRHCEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSSEDVLTLLSATLEAKRLVAKPVITMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD"
     gene            9752..11767
                     /gene="rep"
                     /locus_tag="AABD07_001384"
     CDS             9752..11767
                     /gene="rep"
                     /locus_tag="AABD07_001384"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HFB2355898.1"
                     /translation="MMKLNAQQLEAVRYLGGPLFVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNVREQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFALMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTRYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNAYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGNYRAKAEIDEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVGEL
                     VSWFARKGERDGKNVIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRIDNLKKSGPAD"
     gene            complement(11837..12895)
                     /gene="dinB"
                     /locus_tag="AABD07_001385"
     CDS             complement(11837..12895)
                     /gene="dinB"
                     /locus_tag="AABD07_001385"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HFB2355899.1"
                     /translation="MSLRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATVKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGAGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLARGTDEHPVKAERERLQISTEITLPEDLPLGQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLI
                     GIGVGRLVPKNQQQDLWA"
BASE COUNT         3225 a         3836 c         3434 g         2707 t
ORIGIN      
        1 tgtactgtct gcggcttcgt cgccttgtcc tgattgaaat ttaatccact atatatttca
       61 gaaattgaaa cccgcacaga ttgttaaacc ccaaaacagg ggcgggcgaa attcttccgg
      121 caatgggttc atgcaaacaa aatgccacct gaaccccgaa aacagggttt cagacggcat
      181 ttgtgtattc gcggacggcg ggttttaaat ctgttccaat tccatgttta aaacggtttg
      241 ttcctgtttg gctcggaagt ctgccagttt ttgcgccagt tcggggtttt cgttggcgag
      301 catggagatg gcgaacaatg cggcatttgc cgcgcctgcc tcgccgatgg cgaatgtggc
      361 gacgggtacg cctttgggca tttgtacaat cgataaaagc gaatcttcgc cgcgcaggta
      421 tttgcttggg acgggtacgc ccaaaacggg gacggtggtc ttggcggcaa ccatgccggg
      481 taaatgcgcc gcgccgcccg cacccgcgat gatggctttg atgccgcgcg cccgtgcggt
      541 ttcggcgtat tcaaacatca aatccggagt gcggtgtgcg gaaacgacgc gcgcctcata
      601 ttctacgccg aactcttcaa gaaactgcgc tgcctgccgc ataacgggcc aatcgctgtt
      661 gctgcccatg atgatgccga tttgtatcat aaatccttct tggtgcggat ggggtaaaaa
      721 gcggaaaaat ggaaaaacta tcgtttgcgt acggctgcgg cggcgcgttt tgccgccggg
      781 ctgccgggat aggtctgtat caggctgcgc caagtcgccc ttgcaatgtc tttttgctga
      841 agcctgtatt ggcatttgcc gattttgaat atgacttcgg gcgcggttgg gctgtctttg
      901 aaacggttgg cgtaacgccc tccgatttcg atgacagatt cacagttccc catacgcgcc
      961 ctgctttgca gcaacaggta catactgcgt tgcgcgatgc tgccgccgtc tccgccgtcc
     1021 gcccccttca acaaggcggc tgcggcagaa aacctgccgt tttgatagtg tttgagtgcc
     1081 tgattgtaga ggttttgtgc ggtttcgacg gtatgtgcgg atgcgctgcc gccttcggta
     1141 ttgaggtaat gctctttcaa tttgcggtcg tcgagttttt ggacgtatgt cctgccggaa
     1201 gggtgtgttt ttgcgtgttc caatgctttg actttgccgt ttaaggtttc cacttcgttc
     1261 gacagccgga cgattttgcc ttccagatag tccaaacggt cttgcagagt gggaacggga
     1321 tagggaatgc cgtctgaagc attttcctgt gtcggcattt cggttcggct gccctccgga
     1381 acgggtgaaa cggaagcaca ggaggcagac acagacagcc aaatgataaa aagcggtaat
     1441 ttggtcttca ttattttttc agaagcaggg tcaaaccgtc gccgacgggc agggtgatgg
     1501 ggacgatgcg cgtatcgttc ggcaggtttt gattgaaatc tttgagaatt ttgacactgg
     1561 gcggcgcatc aaaagccgct tcgcgcatca cccttccgtt caacaaaata ttgtcgatgg
     1621 cgatgatgcc gccttgccgg acgagtttga ggcaacgctc gaaatattgc ggcgtgggcg
     1681 gtttgtctgc gtctatcagt gccaaatcgt agcttccggc ttcaccctgt gcaatcaaat
     1741 catccaatgt cagcaatgcg ggttgcaggt gcaggctgat tttatgcgcc acaccggcct
     1801 cgttccaaac ctgacgcgcc gtatcggtaa aggttacatt gatgtcgcag gcggtaatcc
     1861 gcccgtgttc gggcagcgcc aatgcaagcg cggtgctgct gtatccggta aatacgccga
     1921 tttccagata tttttccgcg cgaatcagct ttgccagcca aaccaaaacc gccgcctgtt
     1981 cgcgcgcaat cgccattttg cccatacggt gatgcccggc cttctcacgc agccgcgtca
     2041 aaacgggatg ttcgggttcg ccgatggcat tcaaatagtt ttgcaggtcc ggtgcgacat
     2101 tggacagatg ggtcgtcatt tcggcgggtt cagtcttggt aataggtata aggttttttc
     2161 gccacttttg ccgattcaaa gtttttttgc tcttcgggat tgagttcgac atcccacaaa
     2221 agccctcgat ttttcaaacg ttcttgcgcc aattcaggtt tttcttcgat caggcggttg
     2281 aggaattgtg tggcttcgga ttggtagtgg tacatctttg cgctccaatt ttacgggata
     2341 cggcgtgatt atactggtat tttccaaacg ggataaacgg cttttatcaa gaatacgggc
     2401 agaaagataa ggggttttat tatagaataa ggcgtttttt gcaacggaag accgccttat
     2461 gccacgcatt gccgccctgc ccgaccacct cgtcaaccaa attgccgccg gcgaagtggt
     2521 cgaacgccct gccaacgccc tgaaagaaat cgttgaaaac agcatagacg cgggcgcaac
     2581 ggcggttgat gtggaactgg aaggcggcgg catccgcctc atccgcgtcg gcgacaacgg
     2641 cggcggcatc caccccgacg acatcgaact cgcgctccac cgccacgcca ccagcaaaat
     2701 caaaaccctg aacgatttgg aacacgttgc cagcatgggc tttcgcggcg aaggcttggc
     2761 cagtatcgcc tccgtcagcc gcctgaccct gaccagccgc caagaagaca gttcgcatgc
     2821 gacccaagtc aaagccgaag acggcaaact cagcagcccc accgccgccg cccaccccgt
     2881 cggcaccacc atcgaagccg ccgaactctt cttcaacacc cccgcgcggc gcaagttcct
     2941 caaatccgaa aacaccgaat acgctcactg cgccaccatg ctcgaacgcc tcgcgctggc
     3001 gcatccgcac attgccttct cactcaaacg cgacggcaaa caagtgttca aacttcctgc
     3061 ccaaagcctg catgaacgta tcgccgccat tgtcggcgat gattttcaga cggcatcttt
     3121 ggaaattgac agcggcaata gcgcgctgcg gctctatggc gcgattgcca agccgacttt
     3181 cgccaaaggc aaaaccgata aacaatattg cttcgtcaac catcgttttg tccgcgacaa
     3241 agtcatgctc catgccgtca agcaggcata ccgcgacgta ttgcacaacg ccctcacccc
     3301 tgctttcgtc cttttcctcg agctgccgcc caaagccgtg gatgtcaacg tccacccgac
     3361 caaaaccgaa atccgcttcc gcgacagccg gcaagtacac caactcgtgt tccacacgct
     3421 caacaaagcc cttgccgaca cacgcgccaa cctgaccgaa agcgtcagca acgcaggcga
     3481 agtgttgcat gacattaccg gcgttacgcc tgccccaatg ccgtctgaaa acgacagcga
     3541 aaatctgttt gatagcgcat ccaaccaccc gacaggcaac aaacccgata cacgcaatgc
     3601 ctttggttca tcaggtaaaa ccgcgcccat gccttaccag gccgcgcgtg cgccgcaaca
     3661 acacagcctg tccctgcgcg aaagccgcgc ggcaatggac acctatgccg aactctacaa
     3721 aaaaaccgac gacatcgacc ttgagttgag ccaattcgaa caggcacgtt tcggcaatat
     3781 gccgtctgaa acgcctgctc acaaaacaga tacgccgctt tcagacggca tcccgtccca
     3841 atccgaactg ccgccgctcg gtttcgccat tgcccaatta cttggcatct acattcttgc
     3901 ccaagccgaa gacagcctgt tgctcatcga tatgcacgcc gctgccgaac gcgtcaacta
     3961 cgagaaaatg aaacgccaac gtcaggaaaa cggcaacctg caaagccagc acctgcttat
     4021 tcccgtaacc tttgccgcgt cccacgaaga atgcgccgcc ctcgccgatc atgccgaaac
     4081 gctggcaggc ttcggcctgg aactgtccga catgggcggc aacaccctcg ccgtccgcgc
     4141 cgcgcccgta atgttgggca aatccgatgt cgtctccctc gcacgcgacg tattgggcga
     4201 actcgcccaa gtcggcagca gccaaaccat cgcatcacac gaaaaccgca tcctcgccac
     4261 aatgtcctgc cacggctcaa tccgcgccgg ccgcaggctc accctgcccg aaatgaacgc
     4321 gctgctgcgc gatatggaaa atacgccgcg cagcaaccag tgcaaccacg gcaggccgac
     4381 gtgggtcaaa ctgactttga aagaattgga cacactgttc ttgcgcggac agtaagccga
     4441 aaatgctaga atacgccgcc cgaagccgcc gttcagacgg cattccgacg caccgacaga
     4501 aacatcacga ccgaaaccaa gagaaaaaca tggcctatca agttctcgcc cgaaaatggc
     4561 ggcccaaaac cttttccgac ttagtcggtc aggaacacgt cgtcaaagcc ctgcaaaatg
     4621 ccttggacga aggcaggctg caccacgcct acctgctgac cgggacgcgc ggcgtgggca
     4681 aaaccaccat cgcccgcatc cttgccaaaa gcctcaactg cgaaaatgcg caacacggcg
     4741 aaccttgcgg cgtgtgccaa agctgcaccc aaatcgatgc cggacgctat gtcgacctgc
     4801 tcgaaatcga cgccgcctcc aacacaggca tcgacaacat ccgcgaagtc ttggaaaacg
     4861 cccaatacgc gccgaccgcc ggcaaataca aagtctatat catcgacgaa gtgcatatgc
     4921 tttccaaaag cgcgttcaac gccatgctca aaacgctgga agagccgccc gaacacgtca
     4981 aattcatcct cgccaccacc gatccgcaca aagtccccgt taccgtatta agccgctgcc
     5041 tgcaattcgt cttacgcaat atgaccgcgc aacaggttgc cgaccacctt gcccacgtcc
     5101 tcgacagcga aaaaatcgcc tacgaccccc ccgccctgca acttttggga cgtgccgccg
     5161 ccggatcgat gcgcgatgcc ttaagcctgc tcgaccaagc catcgcccta ggttcgggca
     5221 aagttgccga aaacgatgtc cgccaaatga tcggcgcggt tgacaaacaa tacctgtacg
     5281 aactgctgac aggcatcgtc aaccaagacg gcgaagccct gctggcaaaa gcgcaggaaa
     5341 tggcggcgtg tgccgtcggc tttgacaacg ccttgggcga actggccata ctgctgcaac
     5401 aactcgccct gatacaggca gtcccctccg ccttggcgca cgacgacccc gattccgata
     5461 ttttgcaccg cctcgcccaa accataagcg gcgaacaaat ccagctttac taccaaatcg
     5521 ccgtccacgg caaacgcgac ctgggcctcg cccccgacga atacgccggc tttatgatga
     5581 ccctgctgcg tatgctggcg ttcgccccct tggcggcggc ttcgtgtgat gcaaacgccg
     5641 tgattgaaaa taccgaactt caatccccgt cggcacaaac cgccgaaaag gaaaccgccg
     5701 caaaaaagcc acaaccgcgc cctgaagcgg atgccgccca aacgcccgtt cagacggcat
     5761 ccgcagcagc aatgccgtct gaaggcaaaa ctgccggccc cgtttcccat caagaaaaca
     5821 acgatgttcc gccttgggaa gacgcgccgg acaaaaccga aaccgcagcc ggcacggcgc
     5881 gaacgtcggc aaaaagcatt cagacggcat ccgaagccga aacgccgccc gaaaatcaag
     5941 tttccaagaa caaggcagcc gacaacgaaa ccgaggcttc cttgtccgaa gtgccgtctg
     6001 aaaaccccat tcaggcaaca ccgaatgatg aagccgttga aacggaaaca tttgcacacg
     6061 aagcccctgc agaacctttc tacggttttc cggataatga ctgccccccg gaagacggcg
     6121 tggaaatccc gccgcccgat tgggcaaatg tcctccctgc cgataccgca ggcggaggga
     6181 cggacgaaga agcagaagcg ggcggcatcg gcggaaacaa cacgccgtcc gccccgccgc
     6241 ccgaattttc caccgaaaac tgggcagcca tcgtccggca cttcgcctgc aaactcggcg
     6301 cggcgcaaat gccggcgcaa cactccgcgt ggacggaata ccgttccgac accggactga
     6361 tggttttggc aatgaccgcc gaagcccgcg ccaccgccga caaaaagcgg ctcgacaaaa
     6421 tccgcgacac cctcgcccaa gcctacgggc tgcaactcac cctgcaaacc gaagactggc
     6481 gcgacgaagc cggccgggaa acccccgcga tgcaggacaa gcgtgtccaa gccgaagaca
     6541 ggcaaaaagc acaagcattg ctcgaagccg accccgccgc acaaaaaatc ctccaagcat
     6601 tcggcgcgca atggcagccc gaatcactgg aattggcggc aaaccggcca taaacagata
     6661 taatgccgcc cgaacccttc ggacggcatt gccgcttccc tcattcattc aaacacaaac
     6721 aggagtattc agtatgttcg gaaaagccgg attaggcggc ctgatgaaac aggcgcagca
     6781 aatgcaggaa aacatgaaaa aggcacaagc caaacttgcc gaaaccgaaa tcgaaggcga
     6841 agcaggcaac ggcttggtca aaatcacaat gacctgcgcg cacgaagtac gcaaaatcga
     6901 catcagcccc gatttgattc aagaagccgc cgatgacaaa gaaatgctcg aagacctcat
     6961 cctcgccgcc ctcaaatccg cccggggcaa agccgaagaa accgcaaaca aaacaatggg
     7021 cgcattcacc caagatctgc cccccggcgt gggcgacttc ttccgctgac cccgaccgtc
     7081 attcccgcga acgcgggaat ccggtaaccg aaaaaccaca ggaatctatc ggaaaaaaac
     7141 agaaaccccc gccgccgtca ttcccgcgca ggcgggaatc tagaacgtag aatctgaaaa
     7201 accgttttac tcgataaatt tccgtgccga caggtctgga ttcccgcctt cgcgggaatg
     7261 acggcatatt ttttgcattt gatataaagg gtcgtttgaa ttttgttcag caagtgcaaa
     7321 gtattgcaca taaaagggcg caggcttcat ccgtaaagtc ggcgcaggat agaggcaaag
     7381 cgggcgtagg tcgggctgta gcaactgtat ttttcacccc gtcgggtaaa aatatagtgg
     7441 attaacaaaa accggtacgg cgttgcctcg ccttagatca aagagaacga ttctctaaga
     7501 tgctgaagca ccaagtgaat cggttccgta ctatagtgga ttaaatttaa accagtacgg
     7561 cgttgcctcg ccttgccgta ctatttgtac tgtctgcggc tctccgcctt gtcctgattt
     7621 ttgttaatcc gctataccaa aactcaaatc aagccgtccg gaggcggctc aaaaaaaacg
     7681 gtacttcgca gcagaagtac cgtttatcgg gatttcaggt tttattcttc gggtcgttcg
     7741 ccgtcggttt cgtcctgcgt cccttcggtg atgtgcattt ctacgccgtt gagggcgcgg
     7801 atttttgcgt cgatttcgtc ggaaatttcg gggttttctt tcagccagac gcggacgttg
     7861 tctttgccct gaccgatttt cgcgccgttg tagctgtacc acgcgccgga tttgttgatg
     7921 atgtcgtttt tcacgccgat gtcgatcaat tcgccttccc aactgatgcc ttctccgtag
     7981 aggatgtcaa actctgcctg acggaacggg ggggcgactt tgtttttgat gactttgacg
     8041 cgggtttcgt tgcccaatac ttcttcgcct tttttgatgg atccggtgcg gcggatgtcg
     8101 aggcggacgg aagaatagaa tttcagcgcg ttgccgccgg tcgtggtctc ggggctgccg
     8161 aacattacgc cgatcttcat tcggatttgg ttgatgaaca caaccagcgt attggttttt
     8221 ttgatgtgtc cggtcagttt gcgcaaagcc tgactcatca ggcgcgcctg cagtccgacg
     8281 tggctgtccc ccatatcgcc ttcgatttcg gctttgggga cgagtgcggc tacggaatcg
     8341 acgactacca tatctatgcc gcccgaacgg acgagcgtgt cgcagatttc caaagcctgt
     8401 tcgccggtat cgggctggga caggtaaagc tcttcgactt ttacgccgag tttgcgggcg
     8461 taaacgggat cgaaggcgtg ttcggcatcg acaaaggcgc acacgccgcc gtttttctgg
     8521 cattgggcga cggcttcgag gcagagtgtg gttttgccgg aggattcggg gccgaagatt
     8581 tcgacgatgc gcccgcgcgg caggccgccg actccgaggg cgaggtctaa tccgagcgat
     8641 ccggtggaaa tgacttcgag gttttcttcc tgctggctgc cgtccatttt catgatggcg
     8701 cctttgccga aacttttttc gatttgcgcc agtgcggcgg caagggcttt gcttttgtcg
     8761 tctgacatgg gggttactcc ggaacaaatg cggtatgtgg gctgcggcgc aacacgggct
     8821 gcggcgcgga atatgaatcg gtcggtcatt atcgcatgtt tgcctttcgg gggctaccat
     8881 ccgcttcaga ccgaatgccg tctgaaacat tgtccctcct ttgctataat ggcgccctta
     8941 cttttcccgc cagccgcttg aaccgccatg cacaccagcc tgaccgtcaa aaataccgtt
     9001 atcggaagcg ggcgcaccaa aatcgccgtg ccgcttgtcg cccgagatgc cgccgattta
     9061 tcctccgtgc tgtcccaaat caaaaacctg cccttcgata tcgtcgagtt ccgcgccgac
     9121 tttttggaat gcgcgggcag catcggcgaa gtattgcgcc acacgcaggc cgtccgcgac
     9181 gcgctgcccg acaaaccgct gctgtttacg ttcagacggc attgcgaagg cggctcgttc
     9241 ccgtgttcgg acgattatta ttttgaactg ctcgacgcgc tgatcgaaag ccgcctgccc
     9301 gacattatcg atatcgagct gttttccggc gaaaccgccg tccgccgcgc cgtggcaaat
     9361 gctcaaaaaa acggcatcgc cgccctgctc tgcaatcatg agtttcaccg cacgccgccg
     9421 caagaagaaa tcgtatgccg tctgaaacag atggaggact gcggcgcgga catctgcaaa
     9481 attgcggtga tgccgcaaag ctcggaagat gtgctgactt tgctttccgc cacgctcgaa
     9541 gcgaaacggc ttgtcgccaa accggttatt acgatgtcga tggggcagac gggtgcggtc
     9601 agccggcttg ccggacaggt gttcggctca agcatcacgt tcggttcggg aacgcaaaac
     9661 tccgcgccgg ggcaaatcgg cgtatccgcc ctccgtgcgg cactcgactg cctcgaaagc
     9721 ggcgcagact gatttcagac ggcatcaaaa catgatgaaa ctcaatgccc aacagctcga
     9781 agccgtccgc tacctcggcg gccccctgtt cgtccttgcc ggcgcaggca gcggcaaaac
     9841 cggcgtgatt acgcaaaaaa tcaagcattt gattgtcaat gtcggctatc tgccgcatac
     9901 cgtcgccgcg attaccttta ccaacaaagc cgctgcggaa atgcaggagc gcgtcgccaa
     9961 aatgctgccc aaaccgcaaa cgcgcgggct gacgatttgc acgttccatt ctttgggcat
    10021 gaagattctg cgcgaagagg cgaaccatat cggttacaaa aaaaacttct ccattctcga
    10081 ctctaccgac agcgccaaaa tcatcggcga actcttaggc ggcacgggaa aagaagccgt
    10141 attcaaggcg cagcaccaga tttccctttg gaaaaacgat ttaaaaacgc ctgaagatgt
    10201 cgttcagacg gcctctaatg tgcgggaaca acaaaccgcg cgcgtgtatg caagttatca
    10261 ggaaaccctg caaagctatc aggcagtaga ttttgacgac ttaatccgcc tgcctgccgt
    10321 gctgttgcag caaaacagtg aagtgcgcaa caaatggcag cggcggctgc gttatctgtt
    10381 ggttgacgaa tgccaagata cgaatacctg ccaatttgcg ctgatgaaac tcttgacagg
    10441 cgcggaaggg atgtttaccg ccgtcggcga cgacgaccag tccatctacg catggcgcgg
    10501 cgcgaacatg gaaaacctgc gcaaaatgca ggaaaactat ccgcagatga aggtcatcaa
    10561 actggagcaa aactaccgct ccaccgcgcg gattctcaaa attgccaaca aagtcatcga
    10621 aaacaacccc aagctgttta ccaaaaaact ttggtcgcaa ttgggcgaag gcgagccggt
    10681 taaagtcgtt gcctgccaaa acgagcagca cgaagccgat tgggtcgtca gccaaatcgt
    10741 caaacaaaaa ctcatcggcg gcgacaaaac ccgatacgcc gattttgccg tgttataccg
    10801 cggcaagcat caggcacgga ttttcgagga agcattgcgc ggcgcgcgca tcccctaccg
    10861 tctctccggc ggacaaagct ttttcgacaa agccgaaatc aaagacgtgt tgtcttatgt
    10921 gcggctgctt gccaacccca acgacgatcc cgcctttctg cgcgccgtta ccacgccaaa
    10981 acgcggcatc ggcgatgtaa cgctgggcaa actcaacgcc tacgcgcacg agcacgaatg
    11041 cagcctgtat gaagccgcac aaaacgaaga agcccttgcc acactgaaca ataccaaccg
    11101 ccaacacctg caagccttta tggatatgtt cggcaactac cgcgccaaag ccgaaatcga
    11161 cgaagcgggc gagttcatca acagcctgct cgaagaaatc gactatgaaa accatttgat
    11221 gcaaaacgaa gaaggcaaag ccggcgaaat caaatggcgc aacgtcggcg agttggtatc
    11281 gtggttcgca cgaaaaggcg aacgggacgg caaaaacgtc atcgaactcg cccaaaccgt
    11341 cgccttgatg acgcttttgg aaggaaaaga cgaagaagaa accgatgccg tctcgctatc
    11401 cacgctgcac gccgccaaag gtttggagta tccgtatgtt ttccttgtcg gttgcgaaga
    11461 aggtgttttg ccgcacaacg acagcatcga agaaggcaac gtcgaagaag aacgccgcct
    11521 gatgtacgtc ggcatcaccc gtgccaaacg ccaactcacg ctgacccact gtgtcaaacg
    11581 caaaaaacaa ggcatatggc aattccccga acccagccga ttcatagacg aaatgccgca
    11641 ggaagatttg aaaatcctgg ggcgcaaagg cggcgaaccg attgtcagca aagaagaagg
    11701 cagacgtaac cttgccgata taatcggaag gatcgacaac ctaaaaaaaa gcggcccggc
    11761 ggattaaacc ggagccgcaa tgccgtctga aagacgttca gacggcatat tttttgaacg
    11821 gcgcgcgtca agcggtttac gcccacaaat cctgctgctg atttttcggt acaagcctgc
    11881 cgacaccgat accgatgagg cggaacgcgt cttccgtctg cggcgggacg cgcgccatca
    11941 acatttgcgc agcctgcagc agagctgcgc agtcgggcaa tacggaggaa taagtcagcg
    12001 tgcgcgtgat gatgcggaaa tcgtaggtct tcagcttgag cgttacgctt tgggcttcga
    12061 cgtttttgcg cgtgatttgc cgccacaggt cttcggcaag atggggcagg tgtccggcag
    12121 cctgcccgag cggcaggtct tcgggcaggg tgatttctgt ggaaatttgg aggcgttcgc
    12181 gttcggcttt gacggggtgt tcgtccgtac cgcgcgccaa atcataaagg cggtagccgt
    12241 agcgtccgaa atgatttaag agctcgccgc gctcgaaacg gcgcaaatcg cccgccgtcc
    12301 gcatacccag cgactgcatt tttttcagcg ttaccttgcc cgctccgggg attttgccca
    12361 aaggcagggt ttccaaaaat gccataactt tgtgcggcgg caacacaaac tgcccgttcg
    12421 gcttgcgcca gtcggaagca attttcgcca gaaatttgtt cggcgcgatg cctgcggatg
    12481 cggtcaaacc cgtttccgca aaaatggcgg cacggatttc tttggcaact tcgccggcgt
    12541 aagggatatt tttgaaatta cgggtaacgt caagataggc ttcgtccagc gacaagggtt
    12601 cgattaaatc ggtataacgc ctgaatacgg cgtgaatctg cgcggaaacc tgacggtaca
    12661 aatcgaaatg cggaggcaca tacaccgctt gcggacacag ccttttcacc gttgccaccg
    12721 acatcgcgga atgcagcccg aactgccgtg cctcatacga tgcggcgcaa atcaccgaac
    12781 gcgcgccctc ccacgcgacg accaccggcc gccctttcaa atgcggctgc tcgcgtagtt
    12841 ctaccgatgc gtagaacgcg tccatgtcga tgtggatgat tttgcgtaaa gacatcggct
    12901 ctgccgagga taaaagggat attttactgc gggcatcgga caaaatccaa atatactaac
    12961 aggttaaata caaaagagtt ggctggatta attttgaaac tcgataaaaa taatggtttt
    13021 tatcaagcag aaagaaacag taatggaaat tatgatatcg taagaaaaaa ttatctgaaa
    13081 aatattacca aaatacaatc aaatatattg atttacttag ataataccag taccggattt
    13141 aaaattcaac agaggagaaa acaaatcaga gcacaaattt cagccagaca atggagaaga
    13201 ta
//
LOCUS       DAWXHA010000065        13078 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.065, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000065 DAWXHA010000000
VERSION     DAWXHA010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13078
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.065"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(100..1227)
                     /locus_tag="AABD07_001386"
                     /pseudo
     CDS             complement(100..1227)
                     /locus_tag="AABD07_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            complement(1581..2806)
                     /locus_tag="AABD07_001387"
                     /pseudo
     CDS             complement(1581..2806)
                     /locus_tag="AABD07_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748037.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(3199..4446)
                     /gene="fabF"
                     /locus_tag="AABD07_001388"
     CDS             complement(3199..4446)
                     /gene="fabF"
                     /locus_tag="AABD07_001388"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HFB2355900.1"
                     /translation="MSQRRVVITGLGQVSPVGNTAAEAWDNLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEATGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHACKTVISST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(4602..4838)
                     /gene="acpP"
                     /locus_tag="AABD07_001389"
     CDS             complement(4602..4838)
                     /gene="acpP"
                     /locus_tag="AABD07_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HFB2355901.1"
                     /translation="MSNIEQQVKKIIAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            5070..6077
                     /locus_tag="AABD07_001390"
     CDS             5070..6077
                     /locus_tag="AABD07_001390"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HFB2355902.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNTVYKLGLIPVTDNRTKPI
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFLEIGTVTRNPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDAMIRNIEKSKYQGVLGINIGKNAVTPIQNAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGGELGALLEALKNKQAQLAAAHGKYIPLAVKIAPD
                     LDEAQIEDIARVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGFPVREKSNRVL
                     KKLAEHIDGALPIIGVGGIMEGGDAAEKIRLGTTAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            6274..6747
                     /locus_tag="AABD07_001391"
     CDS             6274..6747
                     /locus_tag="AABD07_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HFB2355903.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYENKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLTNKSNIFELKPVLEDLASETRGYSPKNWLYILLNDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSNHSYEENIARLYSHWEHYLNNGGGQG"
     gene            6761..7096
                     /locus_tag="AABD07_001392"
     CDS             6761..7096
                     /locus_tag="AABD07_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355904.1"
                     /translation="MPSEALSGVQTAFCFPTVYKLSLFLDRNNDLIYLKRLEDMIMGF
                     WGSVGKAAKAVGEGLIEAGNQHKALKMEYAEKSSEELHEIVKSDGFFKNSTREKGAAY
                     AVLKERGEV"
     gene            7290..9980
                     /gene="glnE"
                     /locus_tag="AABD07_001393"
     CDS             7290..9980
                     /gene="glnE"
                     /locus_tag="AABD07_001393"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HFB2355905.1"
                     /translation="MSDHRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKALTDEDFQ
                     AFADWDKIRAEESEEELARQLRELRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYQDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNGITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRNLHRQIRS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKIAEMGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPISPEQRQLLAESMGFDSYAAFSDGL
                     NVHRNKVNQLFNEILSEPEEQAQSNSEWQWAWQEKPDEEERLGRLKEHGFDAEAVTAR
                     LEQICHGHKYRRLSAHAQPRFDTIVPLFVQAAAEQNNPTDTLMRLLDFLENISLRSAY
                     LAFLNEHPQTLAQLAQIMSQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DGIEACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTVIAAAL
                     SCAWADMPKKHRDTPQFAVIGYGKLGGKELGYASDLDLVYLYDDPHPEAGDVYSRLAR
                     RLTNRLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFGKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEMLTAERDQTALAGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNIAADCGLIDKTLAGQSRTAYRLYRRQ
                     QHNTKLRDAAKTEVSDELLSHYGNVRKLWREVFGEEAATA"
     gene            10404..12611
                     /gene="uvrD"
                     /locus_tag="AABD07_001394"
     CDS             10404..12611
                     /gene="uvrD"
                     /locus_tag="AABD07_001394"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HFB2355906.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQSGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLGAPDPHTSRMIGCYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRRHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKVVAFVRLIEALRNQVGQMHLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIASRFVEEIPPEVLHYLSVKKPAFDSYGNTRQTTVQRDKIIDDFKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
BASE COUNT         3115 a         3627 c         3531 g         2805 t
ORIGIN      
        1 aacgaacctg gattcccgct ttcgcgggaa tgacggggtt tcgcgggaat ggcgggagtt
       61 tgtcagaaat caccgaaact caaaagccga ccaccttgtt tacgccttca aaatatcgag
      121 aaatttcaaa tcgacttttt cggcatcgaa tttatctttg gcaatcgcat aacttgcatt
      181 ccccatcagg cggacggcag ccctgttttc gataaaataa atcatttttt cggccaagat
      241 gcggggattc caaggttcga tcaggaagcc gttgaccttg tcggcaaccg tttccctgca
      301 tccggggaca tccgtcgtaa tcaccgccct gccgacggcc attgcctcct gggtgcttcg
      361 gggaacgcct tccctataat aagacggcaa tacgaatata tgatgttctt ttatcacttc
      421 ggaaacattg tttacaaaac cggggaaacg gataatatcg cgggcggcag gctgttccaa
      481 atccccgctc ccgcgtggtt tgtcgattgc gcccaaagcg gtaaaaaccg tatcggggta
      541 tttgccctta acctgttccg ccgcccgaat aaaatcatca atcccctttt ctttcagaaa
      601 tctgccgata aagaggaatt ttacgggttc tttttcatcg ggaatatccg cctcggaata
      661 aggatattgc cgcaaatcca gaccgattcc gcccaaaata tggatgtttt ttattttgat
      721 gccgtattga tgcagcaact cgtctttgtc gtcggggttt aatacaatca ggctttccaa
      781 catcggcagg gtaatgcggt acaaggcgat taaaatcccc tttatgattt ttgtttttaa
      841 cggtatgcct tccggctgcg gggtaaatgc gaatcccaaa ccttccagca tcccgacgat
      901 tctgggcacg cctgccaatt ttgcggcaaa agtgccgaaa atcacgggtt ttgcgaaata
      961 agggaaaacc aaatccggcg atattttttt gagtgcttta aatatgagga aggtggattt
     1021 tatatcggaa aacgggttta ccccgctgcg gtttgaccgg taggtaacgg gtgtaacccc
     1081 catttccctg ataatgtcca actcattgtc ggaaaactcc gatacaaagg catacaccta
     1141 atggtttttg ccgattaatt ttttaatgac gggggcgcgg aaaccgtaaa tgctggatgc
     1201 gactgttgtg ataaaaacga ttttcataag gcggacacct tgaatatagg attggaaatg
     1261 cggtctgcat tgatgaaatg ccggatacgg ggcgcggcgg gcaaaccttt gccaagcgcg
     1321 ccgcatccga cgcttcgccc gcccgggcag gggcggcttc agacggcatt ttatcctgaa
     1381 atccgctgca taacgcccag cgatatacag tatcgcgttt tgtgatgatt ttacacccga
     1441 agggaaaacg ggcttatttg aatggcggtt taatcgcggc ggttatttgc ggtttgataa
     1501 ggctgatttg cgtgccgtgc agtccggcaa cgggcggggt gtttggaaaa tgccgtctga
     1561 aggtttcaga cggcattctg tcatgcggcg gttcggggtt cgcggacggg caggacaagc
     1621 agggctgccg tgccggcgag tacggcatcg gcgtaccaca tccagccgta gtcaccgaat
     1681 tgtgtaatca cgatgccgcc gatgtacgag ccgaggaatc cgccgatttg gtgggtgagc
     1741 atcaccagtc cgaacagggt ggcgaggtag cgcgtgccga agagtttgcc ggtaacggcg
     1801 gcggtcgggg cgacggtggc gagccatgtg aatccgagtg cggcggcgaa aatgtaaaag
     1861 ttgaggtcgg ttttgggtga gaagatgtaa atcagcacca tggcgacgcg tgaggcgtag
     1921 agtccgaaca ggatgtgttt tcctttgaag cgtccggtgc atcagcctga gaacacgcaa
     1981 ccggcgatgt ttgccagtcc gatgatggcg atggatgtcg aggcgacggt ggcgggcagt
     2041 ccgcacaggg cgacttccgt gggtaggtgg gttacgagaa aggcgatgtg gaagccgcag
     2101 gcgaaaaagc tcaggtgcag caggatgtag cttggggttt tgaaggcggt tttgactgct
     2161 tctccgaggc tttgtccgtg tgtggcttgg gtgtgttggg tgtgggcggc gttgttgccg
     2221 ccggcaagcc accatgagac gggcagaatc agcagggcga ttgcgcccca aacgtaaaat
     2281 gtacccgtcc agccgacttc gggcaggacg acgagtcctt gagtccttga accagcggtg
     2341 cgaacaggaa ttgtcctgcc gaaccgcctg cgttgaccag tccggatgcc aagccgcgtt
     2401 tgtgtgtggg gacttgggcg gcgacctgtc ccataatgat ggaaaacccg ccggaaccgg
     2461 tgccgaatgc gagcagcagc ccgacggcaa tcatcagccc ccaataagtc gggatgttgg
     2521 aggcaatcag gcaggcgcag acgagcagga gggcaccgcc gcttaatacc ctgaacgcgc
     2581 cgaaacggtc ggcaagcgcg ccggacaatg gttgcaatac gccccacatc agttggaaaa
     2641 cggcgatgat gaggctgaac tgggcaatgt tcaattcggt ggtgttgacg acgggttgga
     2701 cgaacagtcc gagcgtcatc ctcatgccga tggtaatcag caggatgaat gcggcggcgg
     2761 caatgaccgc ccagagtttg ggtgttttcg atgcggtgtg cgtcataata tgtattttga
     2821 gtcggttaag tttgcgaatt ttaacaaacc ggatgattcg ggctaaataa ttcctgattc
     2881 tttggatata gccaacggta tgtctgccga tgccgtctga aagggcttga tgggcgtttg
     2941 cggttcgggt taatatttgt gccgtatttg ttaattccag ttagtatagt ggattaactt
     3001 taaaccggta cggcgttgcc ccgccttagc tcaaagagaa cgattctcta aggtgctgaa
     3061 gcaccgggcg aaccggttcc gtaccatttg taccgtctgc ggcccgccgc cttgtcctga
     3121 tttttgttaa tccactataa aaatgccgtc tgaaacggtt tcagacggca tttcgatgtc
     3181 ggcggcggct ttgcggaatc agcctttgaa gcgtttgaag accagcgtac cgttggtgcc
     3241 gccgaagccg aaggagttgg aaatggcaac gtcgatttcc gcgtcgcgcg cttcgttggc
     3301 gcagtagtcc aaatcgcagc cggcttcaac gtcttgttca aaaatgttga tggtcggcgg
     3361 gattttgccg tcgtgtatcg ccaaaatgct gtacacggcc tccacgccgc ccgccgcgcc
     3421 gagcaggtgg ccggtcatgg atttggtcga gctgatgacg gttttgcagg cgtgttcgcc
     3481 gaacgcgcgt ttgagggctt tggtttcgtt ggcatcgccc aagggggtgg acgtgccgtg
     3541 cgcgttgacg taatccacgt cttcgggatt gatgccggca tctttcagcg cgcgggtaac
     3601 ggcaagggcg gggccttctt cgttcggcgc ggtgatatgg taagcatcgg aactcatgcc
     3661 gaagccgacg atttcggcgt agattttcgc gccgcgtttt ttggcgtgtt ctaattcttc
     3721 caacaccaat atgcccgcgc cttcgccgat gacgaagccg tcgcgacctt tgtcccacgg
     3781 acgggaagcg gtggcggggt cgtcgttgcg ggtggagagg gctttcatcg cagcaaaacc
     3841 gcccacgccc aaggtgctga ttgcgccttc cgcgccgccg gcaaccatta tgtccgcgtc
     3901 gccgtatttg atcagtcggg cggaatcgcc gatggcgtgc gcgccggtgg tacaggcgga
     3961 aaccatgccg tagctcgggc cgcggtagcc tttgaggatg gtaacgtgtc cggaaatcag
     4021 gttgatcagc gaaccgggga taaagaaagg gttgattttg cgcgcgccgc cttcgattac
     4081 ggctttgccg gtggcctcga tgctgggcag tccgccgatg ccggaaccga tgttcacgcc
     4141 gatgcggtct ttgtcgaggt tttccacatc gtccaaaccc gaatcggcaa tcgcctgcaa
     4201 tgcggcggcg atgccgtagt ggatgaacac gtccatccgg cgcgcttctt tcgcgctgat
     4261 gtattgtccg atgtcgaaac cgcgcacttc gccggcgaca cggctgttga tgtcggatgc
     4321 gtcaaagcgg gtaatcgcgc cgatgccgct tttgccggcg agcaggttgt cccaagcctc
     4381 tgcggcagtg ttgccgacag gggaaacctg acctaagcct gtaatgacta ctcttctctg
     4441 actcatgata acctcgctgt tggttgtcgg aatgggggca tatgcggctg tcgtgcagat
     4501 gccgtctgta atttgcggca ggggttcaaa cagtttgcca tataagggaa aagcctctat
     4561 tgcgcggtgc agcagaggct gttgtgtcgg gcgacgaccg gttagccgtt gtgggcattg
     4621 atgtagtcga tagccagttg gacggtggtg attttttcgg catcttcgtc ggggatttcg
     4681 cagccgaagg cttcttccaa agccataacc agctccacgg tatccaaaga atccgcgccc
     4741 aagtcgtctt ggaaggaaga ttcgtttttc acgtcggctt cgtttacgcc cagttgttca
     4801 gcaataattt tcttaacttg ttgttcgatg tttgacatat cagtcgttcc tttatgcctt
     4861 gcggcaggtt gtttaaggga aataaatcgg tggtattgta ccgactttta atagagtttt
     4921 ctatctaatg cctattatat caatatttgc ggatttgtac atttttgggt gcggcgggtt
     4981 ttgtcgttca agtttgacct gtgtgccgta tgtttggcgg gatttcggtt aaaatggcgg
     5041 catttccatc tgaagcagaa agccctgtca tgtatccact tgcccgccgc atcctgtttg
     5101 cactcgatgc cgaaaaagcc caccacttca cgctcgacgc gctcaacacg gtttataaat
     5161 tgggcctgat tcccgtaacc gacaaccgta ccaaacctat aaaactgatg ggtatggatt
     5221 tgcccaaccc tgtcgggctt gccgcaggtc tcgacaaaaa cggtgaatac atcgacgctt
     5281 tgggcgcgct cggtttcggc ttcctcgaaa tcggcacggt tacgcgcaac ccgcagcccg
     5341 gcaacccgca gccgcgcctc ttccgcgttc ccgaacacca aggcatcatc aaccgaatgg
     5401 gttttaacaa ccacggcatc gacgcgatga tacgcaatat tgaaaaaagc aaatatcaag
     5461 gcgtattggg catcaacatc ggcaaaaacg cggttacgcc catccaaaac gccgccgatg
     5521 attatttaat ctgcctcgaa aaagcctacg cgcacgcaag ctacattacc gtcaacattt
     5581 cctcgcccaa caccaaaaac ctccgcgcgc tgcaaggcgg cggcgaattg ggcgcattgc
     5641 tcgaagccct gaaaaacaaa caggcgcagc ttgccgccgc ccacggcaaa tacatcccgc
     5701 tagccgtcaa aatcgccccc gatttggatg aagcacaaat cgaagacatc gcccgcgtcg
     5761 tcaaatccgt cgaaatggac ggcatcatcg ctaccaacac caccatcgac aaatcaagcc
     5821 tcggcagcca tccgctcgca ggcgagcagg gcggtttgag cggttttccc gtgcgcgaaa
     5881 aaagcaaccg ggtgctgaaa aaactggcgg aacacataga cggcgcattg ccgattatcg
     5941 gcgtaggcgg cattatggaa ggcggggacg cggcagagaa aatccgcttg ggcacgaccg
     6001 ccgtccaagt gtacagcgga ttgatataca aaggcccggc gttggtcaaa gaatgtttga
     6061 aggcattggc gcgatgacgc gccccaccca aaatgccgtc tgaacgcacg ttttgccgtt
     6121 cagacggcat tttcatagat tggtatccga ctgttgaaga ggcaatcagc cgtcatttgg
     6181 aagacttttc gtaacaggcg tcaatcgaaa ggggcggaat gacggggcag gcaaaccgat
     6241 gcgtgaacac ggggcaggca accggagtaa aaaatgaacc ttgatttaac cgcgcaaaaa
     6301 gtccgccttt cttggaagga tattctgtgg gggtatgaga ataaatactt gggttgggct
     6361 gatgtggcag cttatgcccg aaaaatgacg ctttcagatc atgatgaacg cgtgttcaag
     6421 ctatctttaa ccaacaaatc caatattttt gaattaaagc ctgttctgga agatttggct
     6481 tcggaaacga ggggttattc ccctaaaaat tggctgtaca tcctcctaaa tgacgtattc
     6541 catagaaaag aagaatttga ggatcctctg ggggaagttg aaaaaattta tgcggatttt
     6601 gattacccgg aagaaataga atcatttgtc aggtatatgc cgcccaaaga cggctatatc
     6661 ccttctaatc atagttatga agaaaatatt gcccggttat attctcactg ggaacactat
     6721 ttgaacaacg gcggcgggca gggttaaaac cggcaatccg atgccgtctg aagcgttatc
     6781 cggcgttcag acggcatttt gttttccgac agtttataaa ctgtcgttgt ttcttgacag
     6841 aaacaacgac cttatttatt tgaaacgatt ggaggacatg attatgggtt tttggggtag
     6901 tgtgggaaaa gcagcaaaag cagtaggcga gggattgatt gaagccggca atcagcataa
     6961 ggcgttgaaa atggaatatg cggagaaatc aagtgaggag ctgcatgaaa tcgtaaagag
     7021 tgatggtttt tttaaaaatt ccacacggga gaaaggtgcg gcttatgctg ttttaaaaga
     7081 gcgtggcgag gtttgaacgg gaaacggcgg catttgccgc tgttttttta tcggcaggca
     7141 tccgtccgaa tatcggggca aggtttcaga cggcatcgaa ggttgctatg atatagtggc
     7201 ttgactttaa accggtacgg ctccgccttg ccctgatttg aagttcatcc gctatcacat
     7261 tcccgccatc ctttcaaacg gaatccgaaa tgtccgacca ccgcctcgac accgcccgcc
     7321 gccattccct gttcctcgcc cgccagctcg acaacggcaa actcaagccc gaaattttcc
     7381 tgcccatgct ggacaaggcg ttgacggatg aggatttcca agcctttgcc gactgggaca
     7441 aaatccgcgc ggaagaaagc gaggaagaat tggcgcggca gttgcgcgag ttgcgccgtt
     7501 atgtggtgtc gcagattatc gtgcgcgata taaaccgcat cagcgatttg aacgaagtta
     7561 cccgcacgat tacgctgttt gccgattttg ccgtcaatac cgcgctggat ttcgcctacg
     7621 cctattatca ggacatgtac ggcacgccga tcgggcgtta taccaaatcg ccgcagcatt
     7681 tgagcgtggt ggcgatgggc aaggcgggcg gctatgagct gaacgtgtct tccgacatcg
     7741 atttgatttt cgtctatccc gaatcgggcg acaccgacgg caggcgcgaa cgggggaatc
     7801 aggagttttt taccaaagtc gggcagaaac tgattgcatt gttgaacggc attactgccg
     7861 acgggcaggt gttccgcgtc gatatgcggc tgcggccgga cggtgattcg ggcgcgctgg
     7921 tgttgagtga aaccgcgctg gagcaatatc tgattacgca ggggcgcgaa tgggaacgct
     7981 atgcgtggtg caaaggccgc gtagtcacgc cgtatccgaa cgacatcaaa tcgctggtgc
     8041 gccccttcgt gttccgcaaa tatctggatt acggcgcgta tgaggcgatg cgcaacctgc
     8101 accgccaaat ccgcagcgaa gtcagcaaaa aaggcatggc ggacaacatc aaactcggcg
     8161 cgggcggcat ccgcgaggtt gaatttatcg cccagatttt ccagatgata cgcggcggcc
     8221 aaatgcgcgc gctgcaactg aaaggcacgc aggaaacgct gaagaaaatt gccgagatgg
     8281 gcattatgcc gtctgaaaac gtcgaaaccc tgcttgccgc ctaccgcttc ctgcgcgatg
     8341 tcgaacaccg cctgcaatac tgggacgacc ggcaaaccca aaccctgccg atctcgcccg
     8401 aacagcggca actgctcgcc gaaagcatgg gtttcgacag ttatgccgct ttttcagacg
     8461 gcctcaatgt tcatcggaac aaagtcaatc agttgttcaa cgaaattttg agcgaacctg
     8521 aagaacaagc gcaaagcaat agcgaatggc aatgggcatg gcaggaaaaa cccgacgaag
     8581 aagaacggct aggccgtctg aaagaacacg ggttcgatgc cgaagccgtc accgcaaggc
     8641 tcgaacaaat ctgccacgga cataaatacc gccgcctttc cgcacacgcc cagccgcgct
     8701 ttgacaccat tgtgccgctg ttcgtacagg cggcggcaga gcaaaacaac ccgacagata
     8761 cgctgatgcg gctgttggat tttctcgaaa acatcagcct ccgctccgcc tatctcgcct
     8821 tcctcaacga acatccgcaa accttggcac aactggcgca gattatgagc caaagctcgt
     8881 gggtggcggc gtatctgaac aaatatccga ttttgttgga cgaactcatc agcgcgcagc
     8941 ttttggatac cgcgtttgat tggcaggcac tcgccgccgc cctttcagac ggcatcgaag
     9001 cctgcggcgg cgataccgaa gcgcaaatgg acacgctgcg ccatttccaa cacgcccaag
     9061 tcttccgcct cgccgtccaa gacctcgccg gattgtggac ggtagaatcc ctctctgacc
     9121 aactctccgc cctcgccgac accgtcattg ccgccgccct ttcgtgcgcg tgggcggata
     9181 tgcccaaaaa acaccgcgac accccgcaat tcgccgtcat cggctacggc aagctcggcg
     9241 gcaaagaact cggctacgcc tccgacctcg acttagtcta tctttacgac gatccccatc
     9301 ccgaagcagg cgacgtgtac agccgcctcg cccgccgcct gaccaaccgg ctttccgccg
     9361 ccaccggcgc gggcagcctc tacgaaaccg acctgcgcct gcgccctaat ggcgacgccg
     9421 gtttcctcgc gcacagcatc gccgcctttg gaaaatacca gcgtgaaaac gcatggacat
     9481 gggaacacca gtccctcacc cgcgcccgct tcatctgcgg cacacccgaa attcagacgg
     9541 cattcgaccg catccgcacc gaaatgctga ctgccgaacg cgaccaaacc gccttggcag
     9601 gcgaaatcat cgaaatgcgc gaaaaaatgt tccccaccca tccgcctgcc gacagcaacg
     9661 tcaaatacgc gcgcggcggc gtggtcgacg tcgaatttat cgtccaatat ctgatacttg
     9721 cccatgcccg ccagtatccg caactcttgg acaactacgg caacatcgcc ctattgaaca
     9781 tcgccgccga ctgcggtttg attgacaaaa ccctcgccgg acaaagccgc accgcctacc
     9841 gcctctaccg ccggcagcag cacaacacca aactgcgcga cgcggcaaaa accgaagtaa
     9901 gcgacgaatt gctgtcccat tacggcaatg tcaggaaatt gtggcgggaa gtgttcgggg
     9961 aggaagcggc aaccgcctga acaaaaaatg ccgtctgaag cctgacgatt cgggtttcag
    10021 acggcatttg tttttggctg tgtctgaaca atcggtacga tttcggttgt ttgcaaattg
    10081 aaaggcggtt attcctatgt tcaggcggca aaccgaaata ttttccccaa ccgatagggc
    10141 gatatcaaag cctattcgaa taccgccttt acggggaagg ggctttccga gcttgaccat
    10201 ggtcaggctc ggcaaatcag cccgcatcct gtcgatgcgt ccgtccaaat cggtttggaa
    10261 cgccgcaatg tgatatccgc ctatcaaggt tttgcgtgcg tgtgtcggcg agggctttgc
    10321 caaaaccgaa atcaaaatca agttgtcagg catccttccg tttctattaa aatagcgcat
    10381 tccatttttc agacggcatc cttatgtttc ccgaccaatc cgcccccaat ctgctgcaag
    10441 gcttgaaccc cgaacaactc tccgccgtaa cctggccgcc gcaatccgcc ctcgttttgg
    10501 caggcgcagg cagcggcaaa acgcgcgtgc tgaccacgcg tatcgcatgg cttttgcaaa
    10561 gcggacaagc cagcgtacac agcattatgg cggtaacgtt taccaacaag gccgccaaag
    10621 agatgcaaac ccgactcggc gcaatgattc ccatcaacgt ccgcgctatg tggctcggca
    10681 cgttccacgg tttgtgccac cgctttttgc gcctgcacca ccgcgacgca ggcctgccgt
    10741 cttcctttca aatcctcgac agcggcgacc agctttccct catcaaacgc ctgctcaaaa
    10801 gcctcaacat cgccgaagaa atcatcgcgc cgcgttcgct gcaaggcttt atcaacgcgc
    10861 aaaaagaatc cggtttgcgc gcttccgtct tgggcgcgcc cgatccgcac acaagccgca
    10921 tgattgggtg ctacgccgaa tacgacaaaa tctgccaacg cgaaggcgtg gtcgatttcg
    10981 ccgaactcat gctccgcagc tacgaaatgc tgcaaagtaa cgaaatcctg cgccggcact
    11041 accaaaaccg cttcaaccac attctggtcg acgagtttca agacaccaac aaactgcaat
    11101 acgcctggct caaactcatg gcgggcggta acgcagcggt atttgccgtc ggcgacgacg
    11161 accaaagcat ttaccgcttc cgcggcgcaa acgtcggcaa catgaccgca ctgatggaag
    11221 aattccacat cgacgcgccc gtcaaactcg aacaaaacta ccgctccgtc ggcaacatcc
    11281 tcgccgccgc caacgccgtt atcgaaaaca acgacgaacg tctcggcaaa aacctgcgca
    11341 ccgacgccga agcaggcgac aaaatccgct attactccgc ctttaccgac ctcgaagaag
    11401 cccggttcat cgtggacgaa accaaagccc tcgaacgcga aggctgggat ttggacgaaa
    11461 tcgccgtcct ctaccgcagc aacgcccaat cgcgcgtcat cgaacaaagc ctgttccgca
    11521 gcggcatccc ctacaaaatc tacggcggcc tgcgctttta cgaacgccaa gaaatcaaac
    11581 acgccctcgc ctacctgcgc ctcgccgtca atcccgacga cgacaacgcc ctcttgcgtg
    11641 tcatcaactt cccaccgcgc ggcatcggcg cgcgcaccgt cgaaaacctt cagacggcct
    11701 caaacgaaca aggcatcacc ctctggcagg cagcctgcaa cgccggcgcg aaagccgcca
    11761 aagtcgtcgc cttcgtccgc ctgattgaag ccctgcgcaa ccaagtcgga caaatgcacc
    11821 tgtccgaaat catcgtcggc atcctcaaag acagcggtct gaccgagcac taccgaaccc
    11881 aaaaaggcga caaccaagac cgcctcgaca accttgacga actcgtcaac gccgccatcg
    11941 agttcaaacc cgaagacagc aactttgaaa ccctgcccga aaacatttca gacgatcccg
    12001 ccttccccat cctcgccttc ttgagcaacg ccgccctcga atccggcgaa aaccaagcag
    12061 gggcaggcga aaaagccgtc caactgatga ccgtccacgc cgccaaaggc ttggaattca
    12121 acgccgtctt cctcaccggt atggaagagg ggcgtttccc cagcgaaatg agccttgccg
    12181 agcgcggcgg cctcgaagaa gaacgccgcc tcatgtacgt cgccatcacc cgcgcccgca
    12241 aacgcctcta catcaccatg gcacagcaac gcatgctgca cggacaaacc caattcggca
    12301 tcgcatcccg cttcgtcgaa gaaatcccgc cagaagtatt gcactacctg tccgtcaaaa
    12361 aacccgcctt cgacagctac ggcaacacgc gccaaaccac cgtacaacgg gacaaaatca
    12421 tcgatgactt caaacagccg caaacctacg caggcttccg catcggacaa aacgtccgtc
    12481 acgccaaatt cggcaccggc gtgattatcg atgccgcaga caaaggcgaa tccgcccgac
    12541 tgaccatcaa cttcggcaaa cagggcgtga aagagctgga taccaagttt gcgaaattgg
    12601 aagcgatgta aatttgaaat gcaggccgga tattcgtatc cgacaaaaaa acatttgacg
    12661 cgtttatcgt ttccgaaaaa ccgctgttgg aaatgtcgga ttcgagaatc cgacctacgg
    12721 caaaaaaccg tagcaaggac aaggcaaata gtcgtctgaa aacgggaagg gcaattttgc
    12781 cgcagccgcc gccgtcattc ccgcgaacct acattccgtc attcccacga aagtgggaat
    12841 ccggaacgca aaatctaaag aaaccgtttt atccgataag tttccgcacc gacaaaacca
    12901 gattcccgcc tgcgcgggaa tgacggcggc gggaatcggc ggattcggcg gagttggtgg
    12961 atttggcggg ctgaagcccg cccttgtata tcggaacttc cgtatcatag cgacaaaccg
    13021 cccggccgcc acccgcgccc gcccaaggca gacaaccgtt gcgcggctca gggagcgg
//
LOCUS       DAWXHA010000066        13071 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.066, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000066 DAWXHA010000000
VERSION     DAWXHA010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13071
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.066"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            198..1541
                     /locus_tag="AABD07_001395"
     CDS             198..1541
                     /locus_tag="AABD07_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HFB2355907.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYVGMRPSMK
                     IKEGEAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYVPEALAKLSSEKVRRNLIQSGLWTALRTRPFSKIPAIDAEPFAIFVNAMDTNPLA
                     ADPTVIIKEAAEDFKRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFVTGRLNTERVVALGGLQVNKPRLL
                     RTVLGAKVSQLTAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRGKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1544..2776
                     /locus_tag="AABD07_001396"
     CDS             1544..2776
                     /locus_tag="AABD07_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HFB2355908.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSPEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFASVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVANPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2769..3545
                     /locus_tag="AABD07_001397"
     CDS             2769..3545
                     /locus_tag="AABD07_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HFB2355909.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVKDAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIRPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGVQ"
     gene            3545..4171
                     /locus_tag="AABD07_001398"
     CDS             3545..4171
                     /locus_tag="AABD07_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HFB2355910.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4175..4768
                     /gene="nqrE"
                     /locus_tag="AABD07_001399"
     CDS             4175..4768
                     /gene="nqrE"
                     /locus_tag="AABD07_001399"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HFB2355911.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPANQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYDFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4782..5999
                     /gene="nqrF"
                     /locus_tag="AABD07_001400"
     CDS             4782..5999
                     /gene="nqrF"
                     /locus_tag="AABD07_001400"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HFB2355912.1"
                     /translation="MEIILGIVMFTVIVLALALMILFAKSKLVSEGDITIKVNDEKEL
                     TMPAGGKLLGALASQGIFVPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLHSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6515..7570
                     /locus_tag="AABD07_001401"
     CDS             6515..7570
                     /locus_tag="AABD07_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFB2355913.1"
                     /translation="MPSETRLPNLIRALIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAKIQKRIDDALKEVNRQMSTYQTDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILQQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNAHGEPWRIGIEQPNIIQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVSDSAMTADGLSTGLFVLGETEALRLAEQEKLAVFLIVRD
                     KDGYRTAMSSEFAKLLR"
     gene            7596..7811
                     /gene="nqrM"
                     /locus_tag="AABD07_001402"
     CDS             7596..7811
                     /gene="nqrM"
                     /locus_tag="AABD07_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HFB2355914.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRTIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(7935..8513)
                     /gene="grpE"
                     /locus_tag="AABD07_001403"
     CDS             complement(7935..8513)
                     /gene="grpE"
                     /locus_tag="AABD07_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HFB2355915.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIREINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            8696..9514
                     /gene="cysE"
                     /locus_tag="AABD07_001404"
     CDS             8696..9514
                     /gene="cysE"
                     /locus_tag="AABD07_001404"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HFB2355916.1"
                     /translation="MKKNHLNTTGFDLWHTIREETAAAAAAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQISKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARLGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFAEIDFMI"
     gene            complement(9718..11229)
                     /gene="ubiB"
                     /locus_tag="AABD07_001405"
     CDS             complement(9718..11229)
                     /gene="ubiB"
                     /locus_tag="AABD07_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HFB2355917.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCVSLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQPIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HVESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKINALVDEARRQEMRDAYIHLVKVQQRQSLWLAAIAVVLLLILLLK"
     gene            complement(11264..11473)
                     /locus_tag="AABD07_001406"
     CDS             complement(11264..11473)
                     /locus_tag="AABD07_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease III domain protein"
                     /protein_id="HFB2355918.1"
                     /translation="MELETVVPPEEGEGEGGGADGEMPEYLELHGGREDDISASSQPE
                     PPRNIKPLVFGLLIAFLGYLLGKIF"
     gene            complement(11881..12219)
                     /gene="erpA"
                     /locus_tag="AABD07_001407"
     CDS             complement(11881..12219)
                     /gene="erpA"
                     /locus_tag="AABD07_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HFB2355919.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            complement(12352..13038)
                     /locus_tag="AABD07_001408"
     CDS             complement(12352..13038)
                     /locus_tag="AABD07_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2355920.1"
                     /translation="METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVGHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTV"
BASE COUNT         3237 a         3665 c         3123 g         3046 t
ORIGIN      
        1 tatcaaatca atatccccct tccgacaatt aaaaacggct tccgcaagga aaaaagcggc
       61 aaatctgaca aacaggtaca attcctgata aaatctaaca ctttgctaca ttaatttatt
      121 caatgctttt gatgccacgc gacacggtat caaaaacacg ccgtttttac cttaaccatc
      181 acaagtaatg caaatctatg attaaaatca aaaaaggtct aaatctgccc atcgcgggca
      241 gaccggagca agtcatttat gacggcccgg ccattaccga agtcgcgttg cttggcgaag
      301 aatatgtcgg catgcgcccc tcgatgaaaa tcaaggaagg tgaagccgtc aaaaaaggcc
      361 aagtgctgtt tgaagacaaa aagaatccgg gcgtagtatt tactgcgccg gcttcaggca
      421 aaatcgccgc tattcaccgt ggcgaaaagc gcgtacttca gtcagtcgtg attgccgttg
      481 aaggcaacga cgaaatcgag ttcgaacgct acgtacctga agcgctggca aaattgagca
      541 gcgaaaaagt gcgccgcaac ctgattcaat caggcttatg gactgcgctt cgcacccgtc
      601 cgttcagcaa aatccctgcc atagatgccg agccgttcgc catcttcgtc aatgcgatgg
      661 acaccaatcc gctggctgcc gaccctacgg tcatcatcaa agaagccgcc gaagacttca
      721 aacgcggcct gttggtattg agccgcctga ccgaacgtaa aatccatgtg tgtaaagcag
      781 caggcgcaga cgtgccgtct gaaaatgctg ccaatatcga aacacatgaa tttggcggcc
      841 cgcatcctgc cggcttgagt ggcacgcaca ttcatttcat cgagccagtc ggcgcgaata
      901 aaaccgtgtg gaccatcaat tatcaagacg tgattgctat cggacgtttg ttcgtaacag
      961 gccgtctgaa taccgagcgc gtggttgcct tgggcggcct gcaagtcaac aaaccgcgcc
     1021 tcttgcgtac cgttttgggt gcgaaggtgt ctcaacttac cgccggcgaa ttggttgacg
     1081 cggacaaccg cgtgatttcc ggttcggtat tgaacggtgc gattgcacaa ggcgcgcatg
     1141 attatttggg acgctaccac aatcagattt ccgttatcga agaaggccgc ggcaaagagc
     1201 tgttcggctg ggttgcgccg cagccggaca aatactccat cacgcgcacc actctcggcc
     1261 atttcctaaa aaacaaactc ttcaagttca cgacagccgt caacggcggc gaccgcgcca
     1321 tggtaccgat cggcacttat gagcgcgtaa tgccgttgga catcctgcct accttgcttt
     1381 tgcgcgattt aatcgtcggc gataccgaca gcgcgcaggc tttgggttgc ttggaattgg
     1441 acgaagaaga cctcgctttg tgcagcttcg tctgcccggg caaatacgaa tacggcccgc
     1501 tgttgcgcaa agtgctggaa accattgaga aggaaggctg attatgggct taaaacattt
     1561 tctggaaaaa atcgaaccgc acttcctgcc gggcggcaaa catgaaaaat ggtatgccct
     1621 ctatgaagct gcggcgacga ttttctatac atccggcgcg gtaacgcgca aagcggcgca
     1681 cgtccgcgac gcgctcgact ccaaacgcat gatgattttg gtgtggctgg ctttgttccc
     1741 cgccatgttt tacggcatgt acaacgtcgg cgcacaggca ttcggtgcct taacgcccga
     1801 tttgctgcaa caaagcatcg ccaacgactg gcattacgcc cttgccaacg ctttgggcat
     1861 caatatgtcg cctgaagcgg gcgtgttggg caaaatgctg ttcggcgcga tttacttcct
     1921 gccgatttac gcgaccgtat ttattgtggg cggcttctgg gaagtcttgt tcgcatccgt
     1981 acgcaaacac gaaatcaacg aaggtttctt cgttacttcg attctgtttg ccttaatcgt
     2041 tccgcccacg ctgccgctgt ggcaggcggc tttgggtatt tctttcggcg ttgtggttgc
     2101 gaaagaagta ttcggcggta caggtaaaaa cttcatgaac cctgcgctgg caggccgcgc
     2161 cttcctgttc ttcgcctacc ccgccaactt gagcggcgat gcggtttgga cggcggttga
     2221 cggctattcc ggcgcaaccg cgctggcgca atgggcggca cacggtgcag acggcctgaa
     2281 aaacgccgta accggtcaaa ccatcacttg gatggacgcg tttatcggca aactgcccgg
     2341 ctccatcggc gaagtctcca ctttggcact cttaatcggc ggcgcgttta tcgtgtttgc
     2401 ccgcatcgct tcttggcgca ttattgccgg cgtgatgatc ggtatgattg cgatgtcttc
     2461 gctgtttaac ttcatcggtt ctgacaccaa cgctatgttt gctatgcctt ggtactggca
     2521 cttggtggtc ggcggcttcg ccatcggtat gctgtttatg gcgaccgacc ccgtttccgc
     2581 ttcctttacc aatgtcggca aatggtggta cggcgcgctt atcggcgtaa tgtgcgtgtt
     2641 aatccgcgtg gccaatccgg cttaccccga aggcatgatg ttggcgattc tgtttgccaa
     2701 cctgtttgcc ccgattttcg actatttcgt cgcacaagcg aacatcaaac gcagaaaggc
     2761 gcgcagcaat ggctaagaaa ttcgataaag acagcttcag cggcacgctg attgtcgtgt
     2821 tggcggtcag cctgatttgc tcggtcatcg ttgccggtgc ggtcgtcggc ttgaaaccca
     2881 tccaagaaaa acaaaaactc caagacaaac aaggctatat tttgagcgtg gccggtttga
     2941 tggataagga caccgacatc ggtaaaacct ttgccgagcg tatcgagcaa cgcgtggtcg
     3001 atttggcgac cggcgaatat gtgaaagacg cgccgaaaga cttcagcgcg cgcatcgcag
     3061 gcaaagaccc cgcgcaaagc atccgcatca aacctgaaga cgatttggca ggcatcaaaa
     3121 gccgcgccaa atacaccgag gtttatttgg taaaaggcga agacggcaaa atcgggcaaa
     3181 tcatcctgcc gatgcacggc aacggtttgt ggtcggtgat gtacggcttc gtcgccatcc
     3241 gacccgacgg caacaccatc aacggcatta cctactacga acaaggcgaa accccgggct
     3301 tgggcggcga aatcggcaat cctttgtggc agcaaaaatt cgtcggcaaa aaattgtttg
     3361 acggacaagg caaactcgcc ctgcacgtgg gcaaaggcgc gggttcggac aaagaacacg
     3421 gcgtagacgc cctctccggc gcgtcgctga cttccaaagg cgtgcaaggt tcgttcgcct
     3481 actggttcgg cgaaaacggc tatatcccct acctgaacaa attgaaatca gcaggagtgc
     3541 aataatggct gatatgaaac gcttgaaaca tttgatgttc tcacccttta tcgacaacaa
     3601 cccgattgcc ttgcaggttt tgggtatttg ttcggctttg gcggttacca ccaaacttca
     3661 gacggccatc gtaatgggta tttccgtagc tttggtaacc ggtttttcca gcttcttcat
     3721 ttcgctggtg cgcaactaca tccccaacag catccgcatc atcgtgcaaa tggcgattat
     3781 cgcgtcgctg gttacgctgg tcgaccaact gcttcaggca tttgcctacg aattgtccaa
     3841 gcagctttcc gtattcgtcg gcctgattat taccaactgt atagtgatgg gccgtgccga
     3901 agcatttgcg atgaaagagc cgccgctgga aagcctgatc gacggcatcg gcaacggtgc
     3961 gggctacggg atgatgctgc ttgtcgtcgc caccgtccgc gaactgatcg gctcaggcaa
     4021 acttttaggt tataccgtct ttcaaaccgt acaggacggc ggctggtatc agaccaacgg
     4081 cctcttccta ctcgccccca gcgcgttctt catcatcggc tttttgattt ggggactgcg
     4141 tacttggaaa cccgaacagg cggaggaata agctatggaa cactatttga gcctcttcat
     4201 caaatccgtc ttcattgaaa atatggcgct atccttcttt ttgggtatgt gtacgttttt
     4261 ggcggtatcc aaaaaagtat ccaccgcatt cggtttgggt gtggcggtaa ttttcgtact
     4321 cgggctgtcc gtccccgcca accaattggt ttactcgctg ctcaaagacg gcgcgattgt
     4381 cgaaggcgtg gatttgacct ttttgaaatt catcaccttt atcggcgtga ttgccgcttt
     4441 ggtgcagatt ttggaaatgt tcttggacaa attcgtcccc gccctctata acgcgctggg
     4501 catctacctg cctctgatta ccgtaaactg cgcgattttc ggcgccgtat cgtttatggc
     4561 gcaacgcgaa tacgacttcg gcgagtccgt cgtgtacggc ttcggcgcgg gtttgggctg
     4621 gatgttggcg attgtcgctt tggcgggcat taccgaaaaa atgaaatatt cggacgctcc
     4681 caaaggcctc aaaggcttgg gcattacctt tatcgccgcc ggcctgatgg caatggcgtt
     4741 tatgtcgttc tccggcatcc agttataaga aagggaccgg tatggagatt attttaggta
     4801 tcgtgatgtt taccgtcatc gtcttagctt tggcactgat gattctgttt gccaaatcca
     4861 agttggtcag cgaaggcgac atcaccatca aagtcaatga tgaaaaagaa ctgactatgc
     4921 ccgccggcgg caaactcttg ggcgcgcttg ccagccaagg catctttgtc ccctccgcct
     4981 gcggtggcgg cggttcgtgc ggacaatgcc gcgttgtcgt gaaaagcggc ggcggcgaca
     5041 ttctgccgac cgagctgtcc cacatcagca aacgcgaagc acgcgaaggc tgccgtttgt
     5101 cctgccaagt caatgtcaaa accgacatgg acatcgaagt acccgaagaa gtgttcggcg
     5161 tgaaaaaatg ggaatgcacc gtcatttcca acgacaacaa agcaacgttc attaaagaac
     5221 tcaagcttgc cattcccgaa ggcgaagaag ttcctttccg cgccggcggc tacattcaaa
     5281 tcgaagcccc gccgcacacc gttgcctaca aagacttcga cattcccaag gaatatcacg
     5341 aagactggga caaatacaat ctgtggcaat acgtttccaa agtggacgag ccgattttgc
     5401 gcgcctactc tatggcttcg tatcctgaag aaaaaggcat cattatgctg aacgtgcgta
     5461 tcgccacgcc tcccccgcgc gtacccgatg cgcctccggg acaaatgtcg tcctacatct
     5521 ggtcgctcaa acccggcgac aaagttacga tttccggccc gttcggcgaa tttttcgcca
     5581 aagacaccga tgccgaaatg gtatttatcg gcggcggtgc gggtatggcc ccgatgcgtt
     5641 cccacatttt cgaccagttg aaacgtttgc actccaaacg caaaatcacc ttctggtacg
     5701 gcgcacgctc caaacgcgaa atgttctatg tcgaagactt cgaccaactc gcggcagaat
     5761 tcccgaactt cacttggcac gtcgccctgt ccgacccatt gcctgaagac aactgggacg
     5821 gctacacggg cttcatccac aacgtggttt acgaaaacca cctgaaaaac cacgaagcac
     5881 cggaagactg cgaattttat atgtgcggcc cgccgattat gaaccagtcc gtcatcaaaa
     5941 tgctcaaaga cttgggcgtg gaagacgaaa acatcctctt ggacgatttc ggcggttaaa
     6001 tattcggctt caaacacaaa aggaagaaac cccggtttct tcctttttta tccgatgccg
     6061 tccgaacacc cttcagacgg catccgccca tacccgtatc aatatcgttt tttaccctgc
     6121 ggcggatgta cggttaaata ttttgacgaa aaaacaaaga agtatacttc tttttagtta
     6181 tggttgattc cataactaaa aaagtatcga taaacccatt ttgcgaggta cggataatgt
     6241 ctgacagctt tgaaaacagc cccgaatacg atgattggat tgaatcgggc ggtcgtgatg
     6301 aagattacga atactactac aacaaatggc aacgcaggac gcgctgacca ttaaaccctg
     6361 acaaaccggt ttgtaaaaca ccggtttgtt ttttattacc gccacccaaa cgacgggcga
     6421 tgccgcccga acgcccttca aacggcatcg gcatagaaac ataccggccg ttttgcgata
     6481 taattcaagc catttgccaa aaccgtcaaa cactatgccg tctgaaacac gcctgccgaa
     6541 ccttatccgc gccttgatat ttgccctggg tttcatcttc ctgaacgcct gttcggaaca
     6601 aaccgcgcaa accgttaccc tgcaaggcga aacgatgggt acgacctata ccgtcaaata
     6661 cctttcaaat aatcgggaca aactcccctc ccctgccaaa atacaaaagc gcattgatga
     6721 tgcgcttaaa gaagtcaacc ggcagatgtc cacctaccag accgattccg aaatcagccg
     6781 gttcaaccaa cacacagccg gcaagcccct ccgcatttca agcgatttcg cacacgttac
     6841 cgccgaagcc gtccgcctga accgcctgac tcacggcgca ctggacgtaa ccgtcggccc
     6901 tttggtcaac ctttgggggt tcggccccga caaatccgtt acccgtgaac cgtcgccgga
     6961 acaaatcaaa caggcggcat cttatacggg catagacaaa atcattttgc aacaaggcaa
     7021 agattacgct tccttgagca aaacccaccc caaagcctat ttggatttat cttcgattgc
     7081 caaaggcttc ggcgttgata aagttgcggg cgaactggaa aaatacggca ttcaaaatta
     7141 tctggtcgaa atcggcggcg agttgcacgg caaaggcaaa aatgcgcacg gcgaaccgtg
     7201 gcgcatcggt atagagcaac ccaatatcat ccaaggcggc aatacgcaga ttatcgtccc
     7261 gctgaacaac cgttcgcttg ccacttccgg cgattaccgt attttccacg tcgataaaaa
     7321 cggcaaacgc ctctcccaca tcatcaatcc caacaacaaa cgacccatca gccacaacct
     7381 cgcctccatc agcgtggtct cagacagtgc aatgacggcg gacggtttat ccacaggatt
     7441 atttgtttta ggcgaaaccg aagccttaag gctggcagaa caagaaaaac tcgctgtttt
     7501 cctaattgtc cgggataagg acggctaccg caccgccatg tcttccgaat ttgccaagct
     7561 gctccgctaa acatacaaac cgattaggaa acaccatgaa aaccctgctc ctcaccttcg
     7621 gcatcttcct gaccgtcatc atcggtatgg cggtcggcta tattttctcc aaacgcacca
     7681 tcaaaggcag ttgcggcggc attaccgctt taggtatgaa aaaaatgtgc gactgcgaca
     7741 caccttgcga caccctgcaa aaaaagctgg atgaagaaaa acaggcaggc ggcatacggg
     7801 ttgaccgtta acgccgaaac aaaatgccgc ctgaagcccg gccggcgggt tcagacggca
     7861 ttgccgcttt acttcgatcg gtttatacgc aaaacgcgct tcaggaaata aatcagatta
     7921 ttccccagac gccttcaggc ttccttctgt gccaccgtaa ccatagccgg gcgcaacaca
     7981 cggtcggaca gggtataacc cttcttcatc acaccaacca cggtattggg ttcctgctca
     8041 ctggccaccg cctgcatcgc ctgatggata ttcggatcga gcttatcgcc cgctttagga
     8101 ttgatttccc tgatttgcgt ggcatcaaac gccttctgca actcattcaa agtcatctgc
     8161 acacccattt tcagcgcatc gaaattaccg ctctgatcca aaagcgccat ttccagataa
     8221 tccttgaccg gcaacatttc cacggcaaac ttctgtccgg cgaacttgtg cgtatcggca
     8281 atttcctgct ggtggcggcg gcgcaggttt tgctcgtttg ccaaagcgcg cagttgttcg
     8341 tctttcaact gcgcttccaa ctcggcaatc cgcgcctgca aatcctcata agccggctcg
     8401 gcggcagcct gttcctgtac accgtccgca tttcctactg tctcgacggt ttccaccgcc
     8461 tccacatttt caaccgcttc ttcactgttt tgctgctgtg tctgttcgct catatcgtat
     8521 ccctcaaaac aaattggaaa tcaaaatccg gttattaccc gagcaagata aggacatttt
     8581 caagaaactt caagcaaagg caggaaattt cacatccgcc gccgaatacc ctaccgcaaa
     8641 aaccatataa acggtaagat accgccgacc ttatgctttt cagacggcat ccattatgaa
     8701 aaaaaaccat ttgaacacaa ccggtttcga cctctggcac accatccgcg aagaaaccgc
     8761 ggccgctgcc gccgccgaac cgatgctggc aagttttttg caccaaaccg tgttgcgcca
     8821 cgagtccctc ggctccgtcc ttgcctacca cctttccagc aaactcggca gcccgattat
     8881 ggacgtgcgc gcgctgtttg aaatttacca gcaggcattg ggcagcgaca cccaaatcag
     8941 caaatgtgtc gaagcagact taaaagccat ctacgaacgc gatcccgcct gcgacgaata
     9001 ttcgctgccg cttttatatt tcaaaggctt ccacgcgatt caggcacacc gcatcaacca
     9061 ccggctgtat ctcgacggac gcaaaacgct ggcgtatttc ctacaaaacc gtatgtccga
     9121 agtattcggc gtggacatcc atcccgccgc ccgtttagga tacgggctga tgctcgacca
     9181 cgccaccggc tttgttgccg gagaaaccgc cgtgttgggc aacaatattt cgattttgca
     9241 cggcgtaacg ctcggcggtt cgggcaaaga aggcggcgac cgccacccca aaatcggcga
     9301 cggcgtgatg atcggcgcaa acgcctcgat attgggcaat atccgcatcg gcagcaatgc
     9361 caaaatcggc gcgggcagcg tcgtggtttc agacgtgccg ccgtccatca cggttgtcgg
     9421 cgtacccgcc aaacccgtgg cgcgatcgct caaaaccccg tcggcggata tggatcaaaa
     9481 tatccagttt gccgaaatcg actttatgat ttgaatatcc gcaccaatgc cgtctgaaac
     9541 gccaaacggg cttcagacgg cattgcccgc ttcaagcctg cgccttaata tgccgccgat
     9601 gccggcactt atcagtcgga caaaatgcct tttattcgat acgcccgatt cccacgcaac
     9661 cggaaataac cggtttcctt gtaaacgggc ggagtcgggc gatgattcgg acaaagccta
     9721 tttcaaaagc aaaatcagca gcaaaacaac cgctatcgct gccagccaca ggctttgccg
     9781 ctgctgcact ttgaccaaat ggatataggc atcgcgcatt tcctgccggc gcgcctcatc
     9841 gaccaaggca ttgattttgc gcggcaggga agggatgatt tgcgcccagt cgggggcttc
     9901 gtttttgagg ttgcgccaaa gggctttggg accgacctgc ccgttcatcc atttcaccaa
     9961 aaacggtttg gcggttttcc acaagtccaa atcgggatcg agttggcggc ccaagccttc
    10021 gatgttgagc agcgtttttt gcagcaatac cagctgcggc tggatttcga cattgaagcg
    10081 gcggctgact tcaaacaggc gcatcagtac caagccgaag gaaatctgcg aaatcggttt
    10141 gttgaacaca ggctcgcaca cggcgcgaac cgccgcttcc aactcttccg cacgcgtgtc
    10201 ggcaggcacc cagcccgatt cgacgtgggc ggtggcgaca cgtcggtaat cgcggttgaa
    10261 aaaggcgagg aaattgatgg cgagatagcg tttgtcgtaa tcggtcagcg taccgacgat
    10321 gccgaaatca agggcgatat agcggttgtc ggcggcaacc aaaatattgc cggggtgcat
    10381 atccgcgtgg aaaaagccgt cgcggaaaac ttgcgtgaaa aagatttcca cgccgtaatc
    10441 ggcaagtttg tgcaaatcga tgccgtctgc tttgagtttg gcgatgtcgg aaaccggcgt
    10501 gccgtccatc cattcaatcg tcagcacgtc gcttgtgcag tagtcgtaaa acaccttggg
    10561 cacaatcagc atattgctgt tttggaaatt gcgcccgagt tgtcctgcat tggcggcttc
    10621 gcgcatcaaa tccaattcgt cgtgcaggta tttgtcgaac tccgccacca cttcgcgcgg
    10681 cttcagacgc ttgccgtctg aaaacaagcg ttcgacccaa gccgcgccga aacgcatcag
    10741 cgacaagtct tgttcgataa ggggcaagag gttggggcgc aaaactttga ccgccactcg
    10801 ttcgcccgaa tgcaggcggg ctttgtgtac ttgggcgatg gacgcgctgg cgacgggctc
    10861 ggtttcaaat tccgcataca gcttttcgat gggctgaccc agcgattttt cgatttgttc
    10921 acgcgaaagc cgcgcgtcaa aaggcggcac tttgtcttgc agctttgcca gttcgacggc
    10981 gtaatcgtgc ggaatcaaat cggggcgtgt ggacaaaacc tgcccgaact tgatgaaaat
    11041 cggccccagg ctttccaagg caaggcgcag acggacggca ggcggttcgt ttttcaattt
    11101 ggacgactgc ggcatcattt tcagcagagc gcatatccaa ccgctaccca tcagcgaaac
    11161 gcacagacct gccagccgat agcggtaaaa agtcccgaca atgaccgtca ggcgtttcaa
    11221 ccatttcata tataaaatcc cgaatacagc atttatcgga caatcaaaaa atcttaccga
    11281 gcagatagcc caaaaaggca atcagcaacc cgaaaaccag cggtttgata ttgcggggcg
    11341 gctcgggttg cgaagatgcg gaaatatcat cttcccgccc gccgtgaagt tcaagatatt
    11401 cgggcatttc cccatccgcg cctcctcctt cgccctcccc ctcctccggc ggcacgaccg
    11461 tttccaactc catatacggg taataatatc caaacccaaa tagctgaaat aatcatgcaa
    11521 ctcttcccgt ttcgcccaag tgcatttttc ctcaaccagc acttgcggtt tggaatcgag
    11581 cgattcgatc aatccttccg ccttttcttc gccgagattc tccttaaggc actcccggat
    11641 aagcccgcga tccacttggg gcgggtagga aacatataca tcgtacaaat cgtttcggta
    11701 atctttactc atctcaatca taagggaaca aatacgcctg ataccgttcc gcccgttcct
    11761 ttcgggaaac ccgattcatc ttcaagcaat cggattatat gtaaattcat cccgataata
    11821 tattttccaa aagtaaaaat gccgtccgaa cgttcagacg gcataacaca aaccagccgg
    11881 tcacacggaa aacgacgatc cgcaaccgca ggttgtttcc gcgttcggat tgcggatgac
    11941 gaactgcgaa ccctgcagac tttccgtata gtcgatttcc gcaccgacca gatattgata
    12001 gctcatcgga tcgaccaaaa agaccaaacc gtttttctca atttcaaaat cgtcgtcgtt
    12061 tttgatttcg tcaaaagtaa atccgtactg gaaacccgaa cagccgccgc cgttgacaaa
    12121 aacccgcaat ttcaaatcgg gattgttttc ttcggcaatc aaatcggcaa ctttggcaca
    12181 gcagctgtca gtaaaaataa tagggctttc gtccgacata gtgttattcc ttaatataat
    12241 attttctgca ttctctctca accccccttc aaaggcaagc agggcttcgc ctttgaaaaa
    12301 ggaattgtcc caatagataa gtttgaccgc ctgcaatttc aagccccaaa ctcaaaccgt
    12361 cctgccgaac cactcgacac gcccgataat ctccacatca tcggtcaagt cgttcaaatt
    12421 gatttcaaaa gcaggataag cctcgttggc ggaaatgaca ttgataatcc cgccggggac
    12481 gatttgcagg cgtttgacca acagattttc attaatccgc aacacataca gtccgtctct
    12541 cggcgtattt tccccatgat tgaccaaaat cgaatctccg tcattcaaaa ccccctccat
    12601 cgaatccccc ttgacggaaa ttacagacag gtttttcgta tctcgggtaa cataattctc
    12661 aatccaatgc cgtctgaacg ccattgtaaa taccggttcc tcatgaccga caaactgccc
    12721 gtatcccgca gccgcccgaa tatcatatct cggcacaaag acaaactcgt ccgtatcaac
    12781 ttcatttccc aaggtatcgt aagcaaggga tttttttggg gcttcatccg gaaacggatt
    12841 accctcccct gtcagcagcc aatcgatact acaccccttc aactgcttaa tttttttcaa
    12901 tgtttcagac ttcggcagac cgccttcatt ccatattctg ctgaagcccg caatcgtcat
    12961 ttcaatatcg gatgcgattt ttgcctgcct cgcttcactt ttccataaaa aaaccagtct
    13021 gtctttaaag gtttccataa atatccttcc gctccccttc attcaatcat c
//
LOCUS       DAWXHA010000067        12795 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.067, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000067 DAWXHA010000000
VERSION     DAWXHA010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12795
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.067"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(144..2180)
                     /locus_tag="AABD07_001409"
     CDS             complement(144..2180)
                     /locus_tag="AABD07_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HFB2355921.1"
                     /translation="MIDNALLHLGEEPRFNQIKTEDIKPAVQTAIAEARGQIAAVKAQ
                     THTGWANTVERLTGITERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFATLSPAQKTKLDHDLRDFVLSGAELPPERQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYAGNRELREQIYRAYVTRASELSNDGKFDNTANIDRTLENALKTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFAREHLGLADPQPWDLS
                     YAGEKLREAKYAFSETEVKKYFPVGKVLAGLFAQIKKLYGIGFAEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFADGTLQLPTAYLVCNFAPPVG
                     GKEARLSHDEILTLFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YDVLAQMSAHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSESDECR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFANSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
     gene            complement(2268..3140)
                     /locus_tag="AABD07_001410"
     CDS             complement(2268..3140)
                     /locus_tag="AABD07_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HFB2355922.1"
                     /translation="MEIWNMLNTWPDAVPIRAEAAESVAAVAALLLARALLLNIHFRR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RYLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNHPAGSETL"
     gene            3406..5796
                     /gene="gyrB"
                     /locus_tag="AABD07_001411"
     CDS             3406..5796
                     /gene="gyrB"
                     /locus_tag="AABD07_001411"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HFB2355923.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKI
                     VGDSDKKGTTVRFLAGTETFGNIEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVINQALTDFLEENPNEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVATLITALGAGIGKEEFNPEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEAALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGLVGEGAKLYKGENEYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            5895..7280
                     /locus_tag="AABD07_001412"
     CDS             5895..7280
                     /locus_tag="AABD07_001412"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HFB2355924.1"
                     /translation="MISIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQTARIAIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLGRIRTQHILRLNGQEIRFIP
                     DRDLNIRGNQVLPKHPNGLRFTAYASDGTVLKEQVYYSVGGGFVVTEEDFEWQSETEK
                     AVPYPYNSCAGLLARCRLNRLDISEVVLANEAALAGCGEAEIRRRVAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(7351..7449)
                     /locus_tag="AABD07_001413"
     CDS             complement(7351..7449)
                     /locus_tag="AABD07_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HFB2355925.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(7650..7985)
                     /locus_tag="AABD07_001414"
                     /pseudo
     CDS             complement(7650..7985)
                     /locus_tag="AABD07_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216298.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
     gene            complement(8021..8097)
                     /locus_tag="AABD07_001415"
     tRNA            complement(8021..8097)
                     /locus_tag="AABD07_001415"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8061..8063),aa:Asp,seq:gtc)
     gene            complement(8130..8205)
                     /locus_tag="AABD07_001416"
     tRNA            complement(8130..8205)
                     /locus_tag="AABD07_001416"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8170..8172),aa:Val,seq:tac)
     gene            complement(8245..8321)
                     /locus_tag="AABD07_001417"
     tRNA            complement(8245..8321)
                     /locus_tag="AABD07_001417"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8285..8287),aa:Asp,seq:gtc)
     gene            complement(8354..8429)
                     /locus_tag="AABD07_001418"
     tRNA            complement(8354..8429)
                     /locus_tag="AABD07_001418"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8394..8396),aa:Val,seq:tac)
     gene            complement(8499..10475)
                     /locus_tag="AABD07_001419"
     CDS             complement(8499..10475)
                     /locus_tag="AABD07_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HFB2355926.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPELEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVEAMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVVTLNNMHETQHVLDNVLSMHPNMPVYARATN
                     DDYVKTFTDMGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            10621..11460
                     /locus_tag="AABD07_001420"
     CDS             10621..11460
                     /locus_tag="AABD07_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HFB2355927.1"
                     /translation="MTATAADLDRLLPQTQCRECGYEGCLPYARAMLRGEAHNLCAPG
                     GATVVRDLAALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVITDECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSDDSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRQGYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            11659..12690
                     /gene="gap"
                     /locus_tag="AABD07_001421"
     CDS             11659..12690
                     /gene="gap"
                     /locus_tag="AABD07_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFB2355928.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSFQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMVKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
BASE COUNT         3065 a         3853 c         3358 g         2519 t
ORIGIN      
        1 gcaggcggga atccagactt gtcggcacag aaacttatcg ggtaaaacgg tttcttcaat
       61 tttatgttcc ggattcccgc ctgcgcgggg ataacgattc aggtatttct acatcgaatc
      121 cgctttttat atcaacctga ctatcaagcc gcgttgtcga agccgctgtg gcgcagcagt
      181 gcgtctatgc tcggttcgcg tccgcggaag gctttgaagg attccgccgc gctgcgggag
      241 ccgccgacgg cgaggatttc ttgccagaag cgtttgcctg tggcggcgac gtcgtcgctt
      301 tcttcaaagg cggcgtaggc gtcggcgctg aggacttcgg cccatgcgta gctgtaatag
      361 cctgcggaat agccgccggc gaagatgtgg ccgaagctgt tggcgaagcg gttgtattcg
      421 ggcggttgga tgacggcgac ttctttgcgc acgctgtcta aaacctgctg ccagtttttc
      481 agacggcatt cgtcgctttc actgtaaatc atcatatcga agagggcgaa ctccatttgc
      541 cggacgagga acataccgcg ctggaagttt ttggcggcga gcattttgtc gaagagttct
      601 ttcggcaggg gctcgccggt ttcttcgtgg gcggacattt gtgccaagac gtcgtattcc
      661 cagacgaagt tttccataaa ctggctgggc agctcgactg cgtcccattc gacgccgttg
      721 atgccggaca cgcccagttc gtccacttgg gtaagcaggt ggtgcagtcc gtggccggtt
      781 tcgtggaaga gggtgaggat ttcgtcgtgg cttaaacgcg cttctttgcc gccgacgggc
      841 ggggcgaagt tgcagacgag gtaggcggtg ggcagttgca gcgtgccgtc ggcaaagcgg
      901 cggcggcctt tgtagtcgtt catccacgcg ccgccgcgtt tgccttcgcg tgcgtacaaa
      961 tccatataaa cgccgccgat ggtttcgccg ttttgttgca attcaaaata gcgcacgtct
     1021 ttgtgccaga cgggaacggt tttttcggcg aatccgatgc cgtagagttt tttgatttgg
     1081 gcgaacaggc ctgccagaac tttgccgacg gggaagtatt ttttgacttc ggtttcgctg
     1141 aatgcgtatt tggcttcgcg cagtttttcg ccggcgtagc tcaagtccca cggctgcggg
     1201 tcggcgagac cgaggtgttc gcgggcgaag gctttgactt cggcgaggtc tttttcggcg
     1261 tagggtttgg cgcggcgggc gaggtcgtgc aggaagttta aaacctgttc gggcgtgtcc
     1321 gccattttgg ttgccagcga caattcggcg taatttttaa agccgagcag tttggcggtt
     1381 ttcaatgcgt tttcgagcgt gcggtcgatg ttggcggtgt tgtcgaattt gccgtcgttt
     1441 gaaagttcgc tggcacgggt aacgtaggcg cggtagattt gttcgcgcag ttcgcggttg
     1501 ccggcgtatt ggataacggc aaggtagtgc ggaatctgca agccgatttt gtaacctgtt
     1561 ttgccttcgc tttgcgcggc ggcggcaaac atcgcgagcg cgtcttcggg aatgccggca
     1621 agcggtgcgg catcgtcaaa gtaaatgccg aacgcgtcgg tcgcgtctag gacgttttgg
     1681 gagaatttgg cggaaagttg cgcgccttcg gtttgcagtt ttgccagttc tgcctgccgt
     1741 tcgggcggca gttccgcgcc gctcaatacg aaatcgcgca ggtcgtgatc gagcttggtt
     1801 ttttgtgcgg gggaaagcgt tgcaaattcg ggggaatttt tgatggtttt gaagcggttg
     1861 tacagttcga tgtcttgtcc gatttcggtg aagaagacgg tgatttcagg catcagttcg
     1921 ttatagacgg cgcgcagttc gggcgtgtcg acgacggagt tgagatggga cacgacgccc
     1981 caaatcctgc cgacgcgttc ggtgatgccg gtcagacgct cgacggtgtt cgcccagccg
     2041 gtgtgcgttt gcgctttgac ggcggcgatt tgtccgcgcg cttcggcgat ggcggtttgg
     2101 acggcgggtt tgatgtcttc ggttttgatt tgattaaaac ggggttcttc gcccaagtgg
     2161 agcagtgcgt tgtcaatcat aagatgggtt tcctttgcgt gttgtgcttc agacggcata
     2221 tcggcaatat gccgtctgaa gccagaaatg gggccggccg gggaaagtta aagtgtttcg
     2281 gagccggcgg gatgatttaa caggcggtat tgtacgcgca aaaattcgtc cataaccgcc
     2341 tgttggattt ccagccgctt tgaaacgggg gaggcgaagc ggacgatgat gcggtatgcc
     2401 ttgtcgtcgt acggtacgcg ggtaacgcgc ggcctggcgg cgggcgtgat aaacagtttt
     2461 tccgcctgca cgttttccaa ataccgctga atggcgggga tgtagggcgc gcacaagggc
     2521 tcgagtacgg ctttcagacg gcatacggct tcatccgaat ccaaatggat gggaacgggg
     2581 atttcgaccg tatggatgac atagtcgccc aaaatattgt cgcggcgcac ggggtggctc
     2641 aacaacaggc tgttggggaa agaaacggtg gttcccgcaa gctgtccgac caaggggttc
     2701 ggaccgacct gcatcatcag cgtgttcaac agattgatgt cgaccacgcg cccgcgcagg
     2761 ccgttgattt cgatatagtc gccgaccgag tattgctggg tggcagacct taaaatactg
     2821 cccgacagac acataatcag ttcttttgtc gccacgacga ccgccgccgc caccgcaaac
     2881 atcgacaacg ccagcgtttg aatttgcgcc gaccagataa atgccagcga aaacagcacc
     2941 aaaagcagcg ttatattgcg gctggcaacc aaaaaccgcc gcttgctttc gatgccgaaa
     3001 tccggatgcc gtctgaagtg gatattcaac agaagggcgc gcgccagcag caaagccgcg
     3061 accgccgcca cggattcggc cgcctccgcg cgtatcggga cggcatcggg ccaagtgttc
     3121 aacatattcc atatttccat ttccgcgccc ctgtccgaaa agtatagggt gtagatttta
     3181 gtggcaaaaa aacgcttttg ccactttgcc ggcaaattcc gcgcccgtac cggccgcaaa
     3241 tgcgccgcac gccctttcag acggcatccg gatgcggata acgctgaatc aggcggcgaa
     3301 atcggctata atacacaatt atatgcgccg tcccgcccgc tttttccaca aggtgcggac
     3361 tgttttggcg gcatcgcaaa atcttttcaa aatccggcaa aaaatatgac tgaacaaaaa
     3421 cacgaagaat acggcgccga cagcatccag gtgctcgaag gcttggaagc ggtacgcaaa
     3481 cgccccggca tgtacatcgg cgacacgcag gacggcagcg ggctgcacca tatggtgttt
     3541 gaagtattgg acaacgccat cgacgaagca ctcgccggac attgcgacaa aatcacggta
     3601 acgatacacg ccgaccattc cgtcagcgtc gccgacaacg ggcgcggtat gcccaccggc
     3661 atccacccga aagaagggcg ttccgccgcc gaagtcatca tgaccgtctt gcacgcgggc
     3721 ggcaaattcg acaacaacag ctacaaaatc tccggcggcc tgcacggcgt gggcgtatcc
     3781 gtcgtcaacg cgctgtccga ctgggtaacg ctgaccatct accgcgacgg caaagaacac
     3841 ttcgtccgct tcgtacgcgg cgaaaccgaa gagccgctga aaattgtcgg cgattccgac
     3901 aaaaaaggca cgaccgtgcg cttcctcgcc ggcacggaaa ccttcggcaa tatcgaatac
     3961 agcttcgaca tcctcgccaa acgtattcgc gaactttcgt tcctaaacaa cggcgtggac
     4021 atcgaattga ccgacgagcg cgacggcaag cacgaaagct tcgccctttc cggcggcgtg
     4081 gcgggcttcg tgcaatacat gaaccgcaaa aaaacgccct tgcacgaaaa aatcttctat
     4141 gcgttcggcg agaaagacgg catgagcgtc gaatgcgcaa tgcaatggaa cgacagctat
     4201 caggaaagcg tgcagtgctt caccaacaac atccctcagc gcgacggcgg tacgcacctg
     4261 accgcgctgc gccaagtgat gacgcgcacc atcaacagct acatcgaagc taacgaagtc
     4321 gccaaaaaag ccaaagtgga aaccgccggc gacgatatgc gcgaaggttt gacctgcgtg
     4381 ttgtccgtca aactgcccga ccccaaattc tcatcccaaa ccaaagacaa actggtttcc
     4441 ggcgaaatcg gccccgttgt caacgaagtc atcaaccaag cactaaccga cttcctcgaa
     4501 gaaaatccga acgaagccaa aatcatcacc ggcaaaatcg tcgatgccgc ccgcgcacgc
     4561 gaagccgccc gcaaagcccg cgaaatcacc cgccgcaaag gcgtgatgga cggcttggga
     4621 ctgcccggca aactcgccga ctgccaagaa aaagaccctg ccctgtctga actctacctc
     4681 gtcgagggcg actccgcagg cggttccgcc atgcagggcc gcgaccgcaa attccaagcg
     4741 attttgccgc tcaaaggtaa aattttgaac gtcgaaaaag cacgttttga aaaaatgctc
     4801 gccagccaag aggtcgccac cctgattacc gcgctgggtg caggcatcgg caaagaagag
     4861 ttcaaccctg aaaaactacg ctaccaccgc atcatcatca tgaccgatgc cgacgtggac
     4921 ggtgcgcaca tccgcaccct gctcctgacc ttcttctacc gccaaatgcc cgaactggtc
     4981 gagcgcggct acatttacat cgcccagccg ccgctctaca aagccaaata cggcaagcag
     5041 gagcgttacc tcaaagacga actggaaaaa gaccaatggc tgctcggcct tgccttggaa
     5101 aaagccaaaa tcgtttcaga cggccgcacc atcgaaggcg cagaacttgc cgacaccgcc
     5161 aaacaattct tgttggcgaa aaccgtcatc gaacaggaaa gccgcttcgt ggacgaactc
     5221 gtcctgcgtg ccatgctgca cgcgtcgccc attgatttga cgtcgtctga aaacgccgat
     5281 aaagccgttg ccgaactttc cggtttgctt gacgaaaaag aagccgccct cgaacgcatc
     5341 gaaggtcatg aaggacaccg gttcatcaaa atcacgcgca agctgcacgg caacgtcatg
     5401 gtcagctaca tcgaacccaa gttcctcaac agcaaagcct accaaaccct cacccaaacc
     5461 gccgccgcgc tcaaaggctt ggtcggcgag ggcgccaagc tctacaaagg cgagaacgag
     5521 tacgacgcgg acagctttga aaccgctttg gacatcttga tgagcgttgc ccaaaaaggt
     5581 atgtccatcc aacgatacaa aggtttgggc gagatgaacc ccgagcagct ttgggaaacc
     5641 acgatggatc ccgccgtgcg ccgcctgttg aaagtgcgca tcgaagatgc cattgccgcc
     5701 gacgaagtgt tcgttaccct gatgggcgac gaggtcgaac cgcgccgcgc ctttatcgaa
     5761 aacaatgcgc tgattgcgca aaatatcgac gcataagtgc cgttttaaaa aaggagacgg
     5821 gcagcttgcc gcgtctcctt ttggtttgtc aaacggaagc catgccgtct gaaaccgcct
     5881 ttcggagcaa aaccatgatc agcatttttg atattttcaa aatcggtatc ggcccttcca
     5941 gttcgcatac ggtcggcccg atgaaggccg ccgccgcctt tgccgcaggc ttggacgcgc
     6001 aaaccgcccg catcgccatc gacatttacg gctcgcttgc cctgaccgga tacggacacg
     6061 gcacatttga cgcgctgatg ctcggtttgg aaggcagcct gccgcacgac atcccgcttg
     6121 ccggcattcc cgaacgcctc ggacgcatcc gcacgcagca catcctccgg ctcaacgggc
     6181 aagaaatccg cttcatcccc gaccgcgacc tgaacatacg cggcaatcaa gtgctgccca
     6241 aacaccccaa cggcctgcga tttaccgcct atgcttcaga cggcacggta ttgaaggaac
     6301 aggtttatta ttcggtcggc ggcggctttg tcgttaccga agaagacttc gagtggcagt
     6361 cggaaacgga aaaagccgtt ccttatcctt acaacagttg tgccgggctg cttgcccgat
     6421 gccgtctgaa ccggctcgac atctccgaag tcgtgttggc aaacgaagcc gcgcttgccg
     6481 gatgcggcga agccgaaatc cgccgccgcg tcgctgccgt tgccgaggtt atggaaggct
     6541 gcatcaaacg cggcttgggt gcggacggcg aactgcccgg cggattgaac gtccgccgcc
     6601 gcgccccgca gcttgccgcc aaactcaaag tcctgcgcga aaccgaaatc gtcaacaccc
     6661 agctctggcc gatggtgtac gccatggcgg tcaacgaaga aaacgccgcc ggcggacgcg
     6721 tcgttaccgc cccgaccaac ggcgcggcag gcatcattcc cgccgtattg cattatttcc
     6781 gcaagttcaa cccccacgcc acacaggaac gtgtcgaaaa cttcctgctc accgcaggcg
     6841 caatcggcat cctctacaaa accaacgcct ccatttccgg cgcggatgtc ggttgtcagg
     6901 gcgaagtcgg cgtagcgtgt tcaatggcgg cgggtgcata cgccgaagtc atcggcggca
     6961 cgcccaaaca agtggaaaac gccgccgaaa tggcaatgga acaccatttg ggcttaactt
     7021 gcgaccccgt cggcgggttg gtgcaaatcc cctgcatcga acgcaacggc atcgccgccg
     7081 aaaaagccct caaactcggc acgctcgcgc tcttggaaga cggcacggac aaaaaagtct
     7141 cgctcgacga agtcatccga accatgctgc aaaccggccg ggacatgaag gcgacctaca
     7201 aagaaacctc gcttgccgga ctcgccgcca cgctccggaa aaaagccgtc cccgtatccg
     7261 tgcgcgtggt cgagtgctga ggatggacag aaacgaaaat gccgtctgaa aacagttttt
     7321 cagacggcat ttcatttatt ttttgcgggt ttaccgcttc aacgccaacg tcaacacgcc
     7381 cgccgtaacc agccccaagc ctatccattc ctgcgtgttc gggcgttcgt ccaagaaaac
     7441 caccgccatc aggaatgcaa accggcgttg tttgcagcat ccggcaagaa tttttatagt
     7501 ggattaacaa aaatcaggac aaggcgacga agccgcaggc agtacaaata gtacggaacc
     7561 gattcacttg gtgcttcagc accttagaga atcgttctct ttgagctaag gcgaggcaac
     7621 gccgtaccgg tttttgttaa tccactataa aaggtctttt ctaaaatatg cagatattcg
     7681 aatgtcgaat ttgccttatg attacggttt tctgtcttat ccgccttaaa acgccggtat
     7741 tccgtttgaa ccaaattata tttgccgaaa cactcaaaaa tctcccttac ctgcccgaca
     7801 gacatcaaga cttcgttgtt gtaactgaga aaaatatatt gaaagtccgc atccctaatc
     7861 aaagcctcaa ataccggaac cacatccgat tttgatcaag tccgcgctaa aacacatcgt
     7921 acagcgcaaa accggatggg aatggcaaaa tccggaaaca aacatttttc aaagcgtaca
     7981 aacaaaaaat accaaccgga ggttggtatt tcttaacttt tggcgcggcg gacggggctc
     8041 gaacccgcga ccaccggcgt gacaggccgg tactctaacc aactgagcta ccaccgcgca
     8101 tccattgttt gcaccaatga aaggaaactt ggtgggtgat gacggagtcg aaccgccgac
     8161 attctgcttg taaggcagac gctctaccaa ctgagctaat cacccgtgta taaaaaatac
     8221 cgacagagtc agtattttga aacttggcgc ggcggacggg gctcgaaccc gcgaccaccg
     8281 gcgtgacagg ccggtactct aaccaactga gctaccaccg cgcatccatt gtttgcaaca
     8341 atgaaaggaa acttggtggg tgatgacgga gtcgaaccgc cgacattctg cttgtaaggc
     8401 agacgctcta ccaactgagc taatcaccct tgcgatttgc gaaaacgcta ttagaccaaa
     8461 taaccgggaa tggcgcaagc cttatttcgg catttcattt atattccctg caagctccag
     8521 ttttcaaaag agataatttc ttcttttttg cctgcgacca ccaacacgtc accgccttcc
     8581 aatgtaaacg aggcatccgg gttttcaatc cggccggtgc ggcggcggac gaacaagagt
     8641 ttgatgccgt aagccgccat cggaagcgtg ccgactgttt tgccgacggc gtatgcttct
     8701 gcagccaaag gaaaggcgtg gcggacggtt tcgccatttt cgccgaatcc tgcctcatca
     8761 tcactaccga caaacagtcc ctccaacgcg gcataacggc tgtggcggat atttgccatc
     8821 gtctgataga cgtgccggta cgacgcgccg ttgcccaaca tcgcatagcc tgccagcacg
     8881 agtccggttt ctttggtgtc cgacacggct tcttccgcac ccatatcggt aaacgttttc
     8941 acataatcgt cattggtggc gcgcgcatat acgggcatat tgggatgcat ggacagcaca
     9001 ttgtctaaaa cgtgttgcgt ttcgtgcata ttgttgagcg taaccaccac cattttcgcc
     9061 cgtcccagac cggcggcttc caatacttcc ctgcgtttcg catcgccgaa cgacaccggc
     9121 tcgcctgcac ttctggctac ctgcacgcgt gcgatgtcca agtcgagcgc gaaatacgga
     9181 atatcctctt gggcgaggac gcgtccgacc gtctgcccgc ccctgccgaa gccgacaatc
     9241 agcacatgat cagacttgct catcgcttcc accaacatgc tgtgcagatc gagcgacttc
     9301 atgtcccagc ttgacttgac caagcgcccg accagcgcat cgctgccgcc caagaggaag
     9361 ggcgcgataa tcatcgacag cagaaccgcc gccgtcgccg cctgttccaa ttctggcgaa
     9421 accatatcaa gctgcccggc aatggccagc atcacgaagc cgaactcgcc gccttgcgcg
     9481 agatacaaag ccgttttgag gctgtcgccg accgaatgct tcattttgaa tgcaatggca
     9541 aacacaacca atgccttcaa caccagcagc attgccaaca gcatcaatac ctgccgccag
     9601 ccgccgatca atgcctgaat gtccagcttc atgccgaccg tgataaagaa gaagccgagc
     9661 aaaatatcgc ggaacgggcg aatgtcgtct tcgacttgga aacggtattc cgtttccgaa
     9721 agcaacatgc cggcaacgaa tgcgcccaac gccatagaca aaccttccag ctcagtcaga
     9781 taagccacac ccaaggttac cagcagcaca ttgatcataa agagttcgga cgatttgcgt
     9841 tttgccacca tcctgaacca tcgcgacata attttgctgc cgacgaaaaa cagcagcccc
     9901 agcgtcagca gcatttttgc aaacgccaaa cccaaggccg cccaaatatt tccgtcccct
     9961 ccgccagcca gcgcgggaat cagaatcatc agcggcacga cggcgatgtc ctgcatcagc
    10021 agcacgccca tcgccatctg accgtgcggc tgccccaact ccgtcttttc cgacaaaatc
    10081 cggctcacaa tcgccgtgga cgacatcgcc aacgcgcccg atacggcaaa cgcccaattg
    10141 aacggcacgc ccgtcagcat cagtatgccc attaccgaca gcatcgtaac gccgacctgc
    10201 aaaccgccca gaccgaacac cagccgcctc atcgccctca gcttgggcaa tgaaaactcc
    10261 aaaccgatgc tgaacatcag gaacacaatc ccgatttcgc ccaaataatc cgtcgcatgg
    10321 cttttcggaa tcaggctgag cataccgggc cccgccaaaa agcccaccag caggtagccc
    10381 agcatggagg gaatgttgaa cttgcggcac aggatcaccg taatgaccga caccagcaga
    10441 acaaccacaa taggggcaag cgaaaattcg ttcatggacc gtccgaacag gaaaatacag
    10501 aaaaatgccg tctgaaacgg catacgccgc cgtattataa caaaacaccg cgcaccatcc
    10561 gaaacgggtg cggcatacaa ttctgataaa atacgccctt ttgacccgca ccaccgcaca
    10621 atgaccgcca ccgccgccga tttagaccga ctcctccccc aaacccaatg ccgcgaatgc
    10681 ggctatgaag gctgcctgcc ctacgcccgc gcgatgctgc ggggcgaggc gcacaacctc
    10741 tgcgccccgg gcggcgcaac cgtcgtccgc gaccttgccg ccctgctcgg caaacccctt
    10801 gtcgcacctg ccaaaaccca agccaaagca ctcgcccgga tagacgaaac cgcctgtatc
    10861 ggctgcaccg cctgcatccg cgcctgccct gccgatgcca ttatgggcgc gggcaaactt
    10921 atgcacaccg tcatcaccga cgaatgcacc ggctgcggac tctgcgtcgc cccctgcccc
    10981 gtggactgca tccatatgca gcccgttgcc gacaccgtcc tgccgcgcgc gcgccgtttc
    11041 agcctgtccg acgacagccg ttttgccgcc gccgaacacg cgcgtgcgcg ctacctcaaa
    11101 cgcaacgaac gcaaacagcg cgaagccgac gaacgcaagg ccatgcttgc cgaacgcgaa
    11161 gccgccgtcc gcaacgcgcg tccgcaaacg cccgacacac cgaaaaaacc ggcgttcaac
    11221 cccgccgacc tcatcgccaa agccatggca aaagcgcaaa cccaacagga tcgcctcgcc
    11281 gccgccgaca accgccaagg ctatcaggca aaacagatag ccgaagcccg cgaacgcgcc
    11341 gagttgcgcc gcgcccaacg cgatatgaaa tacggcagcg acagcgaaaa agccgccgcc
    11401 ctcgaatacc tcaaacaata caaagccaaa caggaagccg cacagaatac cgcctcctga
    11461 cccttacccg acatgccgtc tgaagccgct tcagacggca ttttatcaag ctctccgtcc
    11521 gccgtacccg tgccgtccgt atcttaccgc ccacccttcc ggccgtgccg ttttcaataa
    11581 aatattaatt acacgccact acaaatttgc tataatccgc cccgaaaatc tacccaaccc
    11641 tcaacaaagg aacaaaccat gggcatcaaa gtcgccatca acggctacgg acgcatcggc
    11701 cgccaggttt tgcgcgccat ctacgactat cagattcaag accaactcca aatcgtcgcc
    11761 gtcaacgcca gcggcagcct tgaaaccaac gcccatctga ccaaattcga caccgtacac
    11821 ggacgctttg aagccgacgt atcccacgac ggcggcaacc tcatcgtcaa cggcgacaaa
    11881 atccccttct tctcgacccg caaccctgcc gaactgccgt ggaaagaact cggtgtcgat
    11941 ttggtcatgg aatgcaccgg cgcgttcacc agcaaagaaa aagccaaaat ccacctcgaa
    12001 agcggcgcga aaaaagtcct catttccgca ccgggcggcg acgatgtcga tgcaaccgtc
    12061 gtgtacggcg tgaacgacag cgtcctgacc gccgacatga ccgtcgtttc caacgcttcc
    12121 tgcaccacca actgcctctc gccggttgcc aaagtgttga gcgaaagcgt cggcatcgtc
    12181 aaaggcgcaa tgaccaccat ccacgcactg accaacgacc aaaccgttac cgacgtgcgc
    12241 cacaaagacc tgcgccgcgc ccgcagcggc gtggaaaaca tgattccgac caaaaccggc
    12301 gcggcaaaag ccgtcggttt ggtcttgccc gaattgaaag gcagactcga cgggcttgcc
    12361 atccgcgtgc cgaccgtcaa cgtatccttg gtagatttga gcttccaagc cgcgcgcgac
    12421 accacagtcg aagaaatcaa cgcactgatg aaagccgcct cggaagcagg cgcgctcaaa
    12481 ggcgttttgg gctacaacac cctgccattg gtttccatgg acttcaacca caccaccgaa
    12541 gccagccact tcgacgcaac gctgaccaaa gtcgtcgacg gcaacatggt caaagtgttc
    12601 gcgtggtatg acaacgaatg gggcttcagc tgccaaatgc tgaacaccgc acgccgtatg
    12661 ttcggacttg aagtgcgccc gctcaaataa gcgacaaacc gtcaaacaaa atgccgtctg
    12721 aaacccgatg ttttcaagtt tcagacggca cttttcattt ttgaccgcga ttttacccgg
    12781 ctgtcgtcat ttcca
//
LOCUS       DAWXHA010000068        12632 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.068, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000068 DAWXHA010000000
VERSION     DAWXHA010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12632
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.068"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            64..1207
                     /locus_tag="AABD07_001422"
                     /pseudo
     CDS             64..1207
                     /locus_tag="AABD07_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980936.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
     gene            1770..1952
                     /locus_tag="AABD07_001423"
     CDS             1770..1952
                     /locus_tag="AABD07_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355929.1"
                     /translation="MFWYVIGFCAFVVALLSLWVNAGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPKAGEKRQ"
     gene            complement(2013..3014)
                     /locus_tag="AABD07_001424"
     CDS             complement(2013..3014)
                     /locus_tag="AABD07_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HFB2355930.1"
                     /translation="MIDGQTTEPKQKTRIIPAPMRGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAD
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTGKMRLGYEDKS
                     PALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIHDTVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSTWIGQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEMDV"
     gene            complement(3091..6924)
                     /locus_tag="AABD07_001425"
     CDS             complement(3091..6924)
                     /locus_tag="AABD07_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HFB2355931.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWHILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     QQADVLIAAAEKGVELFDGSFDETRQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAVPLDANSAVIN
                     TEKLDKHRSVEYVELAGLYGRHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWNMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGINIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTAATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVAAVKARWDWLLAHLDAPLADYKSRYGTA
                     VHAAPEAKDDESCFTAFRDFRLRVSVKADVMKPLAEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLTDEDLQPFWNYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIHNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYSDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            complement(7106..7360)
                     /locus_tag="AABD07_001426"
     CDS             complement(7106..7360)
                     /locus_tag="AABD07_001426"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355932.1"
                     /translation="MPSERLSDGIGAIRERRNIEAPAFQIGRRTKPPALAHRSGLLAS
                     APDPVFRFAMRGDPPRRNGIITGFLKNSTVLIRSYAGNTA"
     gene            7185..7281
                     /gene="ffs"
                     /locus_tag="AABD07_001427"
     ncRNA           7185..7281
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="AABD07_001427"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            7505..7924
                     /locus_tag="AABD07_001428"
     CDS             7505..7924
                     /locus_tag="AABD07_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355933.1"
                     /translation="MKKLLMITLTGMLAACSTGVNVGRLMVEMPQGERSVVVQVPATN
                     NPLSDAVAVGMIKTSGSPSASNMIEMLGADNINVGVAGGSQMFNKATALYSLNHAKKV
                     GNNVSVYMTGDSESDKADLENAANAKNIKLHYFFNQK"
     gene            8021..9712
                     /gene="dld"
                     /locus_tag="AABD07_001429"
     CDS             8021..9712
                     /gene="dld"
                     /locus_tag="AABD07_001429"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HFB2355934.1"
                     /translation="MNASQLISSLTQITGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQKKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKVSFLPKHFSDKAMQFVSKFLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFSHHGGAFFECNAEETQAAMLHRFAVASAAIRYRSVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNGCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGIGKTSKKKNWAE"
     gene            9897..10268
                     /locus_tag="AABD07_001430"
     CDS             9897..10268
                     /locus_tag="AABD07_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HFB2355935.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     MTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGG"
     gene            10408..10956
                     /locus_tag="AABD07_001431"
     CDS             10408..10956
                     /locus_tag="AABD07_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFB2355936.1"
                     /translation="MARLTVHTLETAPEAAKPRVEAVLKNNGFIPNLIGVLANAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIRIIAARTNQCGFCVAGHTKLATLKKLLSEQSLNAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNRQQAVEVVMGVALA
                     TLCNYANNLAQTEINPKLQAYA"
     gene            11092..12174
                     /locus_tag="AABD07_001432"
     CDS             11092..12174
                     /locus_tag="AABD07_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HFB2355937.1"
                     /translation="MNAQTLLANVAELVKTKLKPLVDDIDRKGYYPEAFMRELGAIGA
                     VGIEAEGGNGLGLATRIAVLREIGKECGATSFSAWCQAACAWYLHQTPNRVVKEKYLA
                     DILQGKVLAGTGMSNTVKHLAGIEKHNLQAECVEGGYTVNGALPWVSNIGEDHIWANT
                     AQIGGGYVMFITGGQREGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPEQFA
                     GYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANIVNAEVNSYLDDGYDSLKARLDGAW
                     AETERLAGLAWDNTPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQRRVG
                     EAMFVAIVTPAIKHLCKEIAAIEAAK"
     gene            12307..12477
                     /locus_tag="AABD07_001433"
     CDS             12307..12477
                     /locus_tag="AABD07_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HFB2355938.1"
                     /translation="MAQYMCGPCGWIYDEELGDPEHGIAPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2925 a         3418 c         3461 g         2828 t
ORIGIN      
        1 gtaattggag actgattggg tgtttgcccg atgtttttag caaatttaca aaaggaagcc
       61 gatatgcgaa aaaaacttac cgccctcgta ttgtccgcac tgccgtttgc ggcagttgcc
      121 gatgtcagcc tgtacggcga agtcaaagct ggtgtggaag gcaggaacat ccggctgcag
      181 ttgaccgagc caccctcaga aggtcaaacg ggcaatacag ttactaaggc caaaagccgc
      241 atcaggacga aagtcagtga tttcggctcg tttatcggct ttaagggggt ggggatttgg
      301 gcggcgggct gaaggctgtt tggcagctcg agcaagacgt atccgttgcc ggcggcggcg
      361 cgacccgttg gggtaacagg gaatccttta tcggcttggc aggcgaattc ggcacggcgc
      421 tcgccggtcg cgttgcgaat ccgtttggcg atgccagcaa agccattgat ccttgggaca
      481 gcaataataa tgtggcttcg caattgggta ttttcaaacg ccacgacggt atgccggttt
      541 ccgtgcgtta cgactccccc ggattttccg gtttcagcgg cagcattcaa tttgttccga
      601 gtcaaaacag caagtccgcc tatacgcctg ctactttcac gctggaaagt aatcagatga
      661 aaccagttcc ggctgttgtc ggcaagccgg ggtcggatgt gtattatgcc ggtctgaatt
      721 acaaaaatgg cggctttttc ggaaattatg cccttaaata tgcgaaacac gccaatgagg
      781 ggcatgatgc tttctttttg ttcttgctcg gcagagcgag tgataccgat ccattgaaaa
      841 accatcaggt acaccgcctg acgggcggct atgaggaagc ggcttgaatc tcgccttggc
      901 ggctcagttg gatttgtctg aaaatgccga caaaaccaaa aacagtacga ccgaaattgc
      961 cgccactgct tcctaccgct tcggtaatac agtcccgcgc atcagctatg cccatggttt
     1021 cgactttgtc gaacgcagtc agaaacgcga acataccagc tatgatcaaa tcatcgccgg
     1081 tgtcgattac gatttttcca agcgcacttc cgccatcatg tctgccgctt ggctgaaacg
     1141 aaataccggc atcggcaact acactcaaat taatgccgcc tccgttggtc tgcgccacaa
     1201 attctaaata tcggggcggt gaagcggata gctttgtttt tgatggcttg ccttcattct
     1261 tcgattgcaa tctgactgcc aatctgcttc agccccaaac aaaaatccgg atacggaaga
     1321 aaagcggcaa taaagatagc aaatcccgtc tgaagccctg attgggcttc agacgggatt
     1381 tcgcatacgg cttccctttt cagattcgga ttaaacatgc tatattaatg aatctttcaa
     1441 accgttttcc aaatgaggta aggaaatgag cgaaaccgcg aaaatcaaac tcaacgaccg
     1501 gcccgaaaat gcagaaaaac caaacgaaaa agtcgaactg cccattgtcg ataacgacaa
     1561 aaaaggcgga cacggcgaag gcggttgctg cggctgatac gtttttcggc aaagcagggc
     1621 atctgaaaag tttcgcaaaa ttttcaggtg cccttttttg ttttcaaggt aaatgaatga
     1681 aatactgcgg tcagaagatt tatttgctcg tgcgcttgtg ataaattcgg cactgtattt
     1741 gatatgattt taacaaattt ggaggggcaa tgttttggta tgtaatcggc ttttgcgcct
     1801 ttgtcgtcgc gctgctgtcg ctgtgggtca atgccggcgc gttcggtatg caggaagacg
     1861 ataccccgca atcggattat gaaaaacgtt tgggtttggg ggcgaaactg aaaaacaaaa
     1921 atacaccgaa agcaggggaa aaacggcaat aaagataaca aatgccgtct gaaaggtttt
     1981 cagacggcat ttgctttgaa gcgcgggaga catcaaacat ccatctcatg ctcaaatgcg
     2041 ttcaggattc ggcgcacttc atccgcatct ttaaccgttc ggacgcggtc gaacagcgtt
     2101 tgcgccgggt cgaacgtttt tttcatcatg cccagccatt gcttaagacg ggcgatcggg
     2161 tatttgttgt ttgcctcttt tgtcaggcac agctcgaaaa actgccctat ccatgtggaa
     2221 acttcggcaa aatccgtgtc tttgaccggt ccgccgttct cgtattgctt gatttggcgc
     2281 gccaaatcgg ggcggatgac cgcaccgcga ccgagcatca cgctgttgca gccgctgatt
     2341 gttttgatgc cgatatagtc ctgcaggctg aaaacgtcgc cgttggcggt aacgggaata
     2401 ttgacggtat cgtggatttt ccttatccat tcccaatgcg ccgggggttc gtagccctcg
     2461 gctttggtgc gcgcgtgcac ggtcagtccg cacgcgcccc cttcggcaat cgcacaggcg
     2521 cattccaaag cagggctttt gtcttcatag cctagccgca ttttccccgt cagcggaata
     2581 tgtgcaggca aacgtccgcg cagcgttttg acgatgtgga atatcagttc cggctctttc
     2641 agaagaattg cgccgccttt gtgtttgttg acggtgggcg cggggcagcc gaagttcaaa
     2701 tcgattttgt ccgcgccgaa tcggacggct tccaatgcgt ttgccgccat attgtccgca
     2761 tcgctgccca gaagttggac ggtgcagggc gtgccggaaa acgttttgtt tccgttggcg
     2821 atttcgggga catattttaa ccatatggat cgtgaatgca cggtatgggt aatgcgtaca
     2881 aattcgctga cgcattcgtc gtagccgccg atacgtgtca gcaggtcgcg catcacatcg
     2941 tctaccagcc cccgcatggg ggctggtatg attctggttt tttgtttggg ttcggttgtt
     3001 tgtccgtcaa tcatgattcg ggtaggtatt tgattcaaac aatgccgtct gaaggctttc
     3061 ggcgttcaga cggcatttcc gtgtccgttg ttatagcaac actttctcta cgccgccgtt
     3121 gttggctttt tttacaaact catccagcca gttttcgccg aggatgtgtt tcgccatttc
     3181 aatgacgatg tagtcggcag gcatattgtt gtcgtcggaa tagcggctca gtccttgcag
     3241 gcaggcgggg caggaggtca gcattttgac gggttcgccc tgcggcagct ctttgaggtt
     3301 tttctcgatt tcctcttgtt tgcggaactt gacctgtgtg gcgatgtcgg ggcgtttgac
     3361 ggcgaacata ccggattcgc cgcagcagcg gtcgcttaaa acgactttct gccccatcag
     3421 gctgctggcc atttgggtgg cgttcatggt tttaatcggg gtgtggcagg ggtcgtggta
     3481 gaggtattgc tgacctttca cgccgtcgag tttcacgcct ttttcgagca ggtattcgtg
     3541 gatgtcgatg atgcggcagc cggggaagat ttcctcgaag cggtattttt caagctggtc
     3601 gtaacaagtg ccgcaactga cgacgacggt tttgatgtcg aggtagttga gggtgttcgc
     3661 catacggtgg aaggcgacgc ggttgttggt gctcatttct tcggcttttg ccttgttgcc
     3721 gccagcgtct tgcggatagc cgcaacacat atagccgggc ggcaggacgg tttgtacgcc
     3781 gacgtgccag agcatggctt ggacggcgag tccgatttgg ctgaacaaac gctccgaacc
     3841 gcagccgggg aagtagaaca cggcttcggc atcttcgggc gcggcggggt tgtggatgat
     3901 ggggatgctt ttgccgtctt cgatgcccaa taaggagcgc ggtgttttgg cgggtacgct
     3961 tttgggcagt gggcggttga tgaaatggat aacctgttct ttaatcgggg ctttgccgac
     4021 ggttgccttg ggttcggctt tttgcttttt cgtgccgatc ggaagaagct tgccgatttt
     4081 gtaggcaaag ttctgcgcgg ggaagccggt ctgtatcatc gcggcgcgca gggctttgat
     4141 ggttttcgga ccggtggcgt tcaaaaacgc catacccatt gaagccgcag gcgcaaagcg
     4201 tttgtggccg gaatcggcaa ggtagttgcg gacggctacg gtaacgtcgc cgaagtcgat
     4261 gttgacgggg cagggtttga cgcagcggtg gcacacggtg cagtggtcgc cgatgtccat
     4321 cagttcttca aaatgtttga cggaaacgcc gcgccgggtt tgttcttcgt ataagaaggc
     4381 ctcggtcagc aaacccacgc cgaggatttt gttgcgcggg ctgtacagca ggttggcgcg
     4441 cggaacgtgg gtggagcaga cgggtttaca tttgccgcag cgcaggcagt ctttgacgga
     4501 atcggcaatc gtgccgaggt ctgatttttc cataatcagc gattccgcgc ccaacagctc
     4561 gaaagacggc gtgtaggcgt tgcgtaagtc cgaacctttc atcagtttgt ggcggttgaa
     4621 ggtgtgcttg gggtcgactt ggtttttgta gttccaaaac ggttgcaaat cttcatcggt
     4681 gaggaattcg agcttggtga tgccgatgcc gtgttcgccg gaaatcacgc cgccgagcga
     4741 acgggcgatt ttcataatgc gttccacaga acggtaggcc gtctgaagca tttcggcatc
     4801 gtctgagttg accggaatat tggtgtggac gttaccgtcg ccggcatgca tatgcagggc
     4861 gacaaagacg cggctgcgta cggttttggc gtggattttg cccaagcctt ggataatttt
     4921 ggtatcggtt ttgccgctga agatttcggc aagcggcttc attacgtctg ctttgacaga
     4981 cacgcgcagg cggaaatcgc ggaaggcggt gaagcagctt tcatcgtctt tggcttcggg
     5041 cgcggcgtgg acggctgtac cgtagcgtga tttgtagtcg gcaagcggcg catccaaatg
     5101 ggcgagcagc cagtcccaac gcgctttgac ggcggcaacg tgggcgaggg cgtgtttgcc
     5161 gcgttcgccc aacagttcgg cggtcggcag gtcggtgccc attttgtcga tggggagttt
     5221 gcccgaaaga tattgctcca aagcggcaca gagtttgagt ttgttttgga tggaaagctc
     5281 gatgttgatg cgttcgatgc cgtccgaata ctcgcccagc cgctccagcg gaatcaccac
     5341 gtcttcgttg attttaaagg cgttggtgtg tttggcgatg gcggcggtgc ggctgcggtc
     5401 gagccaaaag gttttgcgcg cttcgggcga tacggcgata aagccttcgc cgtcacgggc
     5461 gcgggcaagt tcgcagatgt gttcggcggc tgcctctacg gcggcttcgt cgtctgaaac
     5521 cacgtccgcc agcaagacca ttttcggtcg tcctttgccc gccgctttgg tggcgtagcc
     5581 gacggcgcgg acataacgcc agtccaaatg ctccaaaccc gccagccgca cgctgtcgtg
     5641 tgcgagcaga aaatcgcgga tttcgacgat agaaggcgtg gcggtggcgg ccgtgccgaa
     5701 aaactccata cacacggtgc gcgtgtattt cggcattttg tgcaatacga aggcaacgcc
     5761 ggtaatgatg ccgtccgtac cttctttctg cacgccgggc agtccgctca aaaatttgtc
     5821 ggtaacgtct ttgcccaaac cgactttgcg gaatttgtgt ccggggattt ccaagcgttc
     5881 ggttttaacg atgttgatgc cgtctgaatc cagcgtgtgc acgtcgaaca cggcagtttc
     5941 ttcgtcgtgg attttgccga aattgtggcg cacgcgttcg atacgcagcc attcgccttg
     6001 agggttaacc atgttccagt aggcgaggtt gtccaaggca gtaccccaca atacggcttt
     6061 tttaccgccc gcattcatcg ccacattacc acccacgcag gacgcgtcgg cggaagtcgg
     6121 atcgacggcg aacaccaagc ccgcctgatg cgcggtttct tccacccgcc gcgtaaccac
     6181 gcccgcgccg caccggataa tcggatgtct gccgtacaag cctgccagct caacgtattc
     6241 gacgctgcga tgcttgtcga gtttttcggt attgatgact gcgctgtttg cgtccaaagg
     6301 taccgcgccg ccggtataac ccgtaccgcc gccgcgcggg ataataacta agtccagctc
     6361 gattaaggcg cgcaccaaag gcgcgacttc cgcctccgtg tcgggattga cgacgacaaa
     6421 cggatattcg acgcgccagt cggtcgcatc ggtaacgtgt gttacccgcg ccagcccgtc
     6481 aaacataata ttgtgcggct tggtgatttt gctcaaacgc tccaaaatct gccgccgctt
     6541 ttggcgcgtt tcgtcaaagc tgccgtcaaa aagctccact cccttttccg ccgccgcaat
     6601 caacacatcc gcttgctgat tatcgtcgcg gcgtttgcgg atttcgttca acctgtggcg
     6661 catttcccgc accagcgcgg cgcggcgttt cggatgctcc agcaaatcat cgaccagata
     6721 cggattgcgt acgaccaccc aaatatcgcc caacacttca aacagcatcc gtgccgaacg
     6781 cccggttttg cgctgtccgc gcaagtcctg tagaatgtgc cacgcctcgt cgcccagcag
     6841 gcggatgacg atttcgcggt cggtgtagga agtatagttg taggggattt cccgaatacg
     6901 ctgcggggcg gtagtcgtgg tcatagtgtg tccgtgtttg gcagttttta tttgaatgcc
     6961 gtttgaaaag tcggtttcag ccgggtttga aaaggcgata atgtagttca atttttgata
     7021 tttttcaatg ccgaaacagg caataccctt atagaaacaa aataacgctt tgagaaattg
     7081 ttgacaatat tatcaaatat aaattttagg cggtgtttcc ggcgtatgac cgtatcaaaa
     7141 cggttgagtt tttcagaaaa cccgttataa tgccgtttct ccgaggcggg tctccccgca
     7201 tggcaaatcg gaacaccggg tcaggggcgg aagccagcag cccactccga tgcgccagtg
     7261 ccgggggttt ggtccgccgc cctatttgaa acgccggagc ttcgatgttc cggcgttccc
     7321 gtatcgcacc gatgccgtct gaaagccgtt cagacggcat ttcctttact ttgccataac
     7381 gcatcattac aatgtatcca tacaggccaa tgaagaaccg gcttcataaa aatggaagta
     7441 tggttcaatt tcaagttatt atgacgaaca gggcggtttg attaaagact aaaggagtag
     7501 gcaaatgaaa aaacttctaa tgataaccct caccggtatg cttgcagctt gttcaacagg
     7561 tgtcaatgtc ggccggttga tggttgaaat gccgcaggga gaacgctctg ttgtcgtgca
     7621 ggttcccgcg acgaataacc cgctttccga tgcggtggct gtcggaatga ttaaaacatc
     7681 cggatcgcct tcggcatcaa atatgattga aatgctcggc gcggacaata tcaacgtcgg
     7741 cgtggcggga ggcagccaaa tgtttaataa ggcgaccgca ctttattcct taaaccatgc
     7801 aaagaaagtc ggaaataatg tcagtgtcta tatgacgggc gatagcgaaa gcgacaaggc
     7861 cgatttggaa aacgcggcaa atgccaaaaa tattaaatta cattatttct ttaaccaaaa
     7921 ataatttgca gcgtgcaact tgccgcacca aaatatccaa attgaacata cggcggcgta
     7981 ccgggatttg cgccgccgct tatcccgata ggagagtgtt atgaacgcct cgcaattaat
     8041 cagcagcctg acccaaatca caggcgaaaa atacatcatt accgaccccg cgaaaaccga
     8101 acaataccgc caaggctacc gtttcggcga aggcaaggcg ttggcggtgg tgcgcccggg
     8161 aagcattttg gaaatgtgga aaattctgca ggcctgcgtc gaagcggacg tgattgtgat
     8221 tacgcaggcg gcgaataccg gactgaccgg cggctcgacc cccgacggca acgattacga
     8281 ccgcgacatc gtgattgtga acaccatgcg gatgaacatc atccaaacca tcaacaacaa
     8341 cgaacaagtc gtctgcctgc ccggctcgac cctgaaccag cttgaactgc tgctgaaacc
     8401 tttgggacga gaaccgcatt cggtcatcgg ctcttcttgc atcggcgcgt ccgttttagg
     8461 cggcgtgtgc aacaactccg gcggcgcgtt ggtacagcgc ggcccggcct acaccgaaat
     8521 ggcgttgttc gcccaaatca acgaagaggg caggttggaa ctggtcaacc acttgggcat
     8581 agacttgggc gacacgcccg aagaaatcct gaccaacctg caaggtcatc attatcagaa
     8641 aaaagacatc aaacaagacg cgggcaaagg acatgaccac gcctattgcg aacacgtccg
     8701 ccaagtggac gaaccgaccg ccgcgcgttt caatgccgac cccgcccgcc attacgaagc
     8761 ctcgggctgc gcgggcaagc tgatggtttt tgccgtccgt ttggacacct tcccgcaaga
     8821 aaaacaaacc gccgtgttct acatcggcac gaacgacatc aacgagctga ccgacatccg
     8881 ccgcgccgcc ttgggcgaat ttgaaagcct gcccgtttcc ggcgaataca tccaccgcca
     8941 cgctttcgac attgccgacg tgtacggcaa agacacgttc tacgtcatca aaaaattcgg
     9001 tacgcaccaa ctgccgaaat tatttgactt gaaggcgcgc gtggacaggt tcggcaaaaa
     9061 agtcagcttc ctgcccaaac atttttccga caaggcaatg cagttcgtca gcaaattcct
     9121 gcccgaccac ctgcccaaat ccatgcgcga ttaccgcgac aaatacgaac accacctgat
     9181 tctgaaaatg ggcggaaaag gcgtggatga ggcgcgcgcg ttcttaaaag aatatttttc
     9241 acaccacggc ggcgcgtttt tcgaatgcaa cgccgaagaa acccaagccg ccatgctgca
     9301 ccgtttcgcc gtcgcctccg ccgccatccg ctaccgttcc gtgcacgacg acgaagtgga
     9361 ggacttggtc gcgctggata tcgccctgcg ccgcgacgac cgcgactggt ttgaaaaact
     9421 gccgccggaa atcgacaata aaatcatcca taaattgtat tacgggcatt ttatgtgcca
     9481 cgttttccat caggattaca tcatcaaaaa aggcaacggc tgtatggcgt tggaacacga
     9541 aatgctgcat ctcttagacc aacgcggcgc gcaatatccc gccgaacaca acgtcggcca
     9601 tttgtatgaa gccaagcccg cgcttaaaca gttttaccgc aaactcgacc cgaccaacag
     9661 cttcaacccg ggtatcggca aaaccagcaa aaagaaaaac tgggcggaat aagcgcgtcc
     9721 gctttgaagg caggcaatgc cgtctgaagg caaaacaccg ttcagacggc attgtcggat
     9781 ctgtcttccc cgacgggcat gttcaagccg tatgtctgca cacgggcgcg cgtctcacaa
     9841 ataaagtctg atcctaccgc cccaaagggc ggggtttcaa ccgaaaagga aacacgatga
     9901 aaccatacaa aatctacacc catcccgccc tgccgcccca agccgtcaaa caaggctggt
     9961 catggccggg tcttttgttc ggcacgctgt gggcgtgttt caaaagaatg tggggtttgg
    10021 ggctggggat gacgggcgcg atattcgtgt tggcggtgtt tgcccaactg gtttacggcg
    10081 acacgcccgc cacagactcg gcgtttaacg tattgggctt ggcggtttcc gtctggttcg
    10141 gcgcaaaggg caacagcctt tatgcacgcc accttttatc gcgcggctat accgaattgc
    10201 ccgaaacagt cgaagccgcc aacccccaag ccgcattggc gcaatatttc ggacgcgggg
    10261 gcgggtaggc gtgtttcccg gcaatgccgt ctgaaaggct tcaggcggca tttcttataa
    10321 ctttttgttt gtggcacagt ctttcctatt ccgttccgaa atgcgtacca tgcgcccgtc
    10381 cccaatattt gcgaacaagg aaagaaaatg gcacgtttaa ccgtacacac cctcgaaacc
    10441 gcccccgaag ccgccaaacc gcgcgtagag gccgtactca aaaacaacgg ctttatcccc
    10501 aacctcatcg gcgtattggc aaacgccccc gaagccttgg cgttttacca agaagtcggc
    10561 aagctcaacg ccgccaacag cctgaccgcc ggcgaagtcg aagtgatccg gatcattgcc
    10621 gcacgcacca accaatgcgg cttctgcgtg gcagggcaca ccaaactcgc aaccctgaaa
    10681 aaactcctgt ccgagcaatc cctcaatgcc gcccgcgctt tggcggcagg tgaatttgac
    10741 gatgccaaac tcggcgcgct tgccgccttt acccaagccg taatggcgaa aaaaggcgca
    10801 gtatccgacg acgaactcaa agcatttttc gatgcgggct acaaccggca gcaggcagtc
    10861 gaagtcgtaa tgggcgtagc cttggcaact ttgtgcaact acgccaacaa cctcgcccaa
    10921 accgaaatca accccaaatt gcaggcatac gcctaagcaa acaaaaccgc ctgaatgcag
    10981 gcggtttttc aaaaacaccc cctcaaacaa aaacaagccg cccaagcggc gggaaaagca
    11041 gccgcgcatc aggcgcgccc ccgattcccc cgtaaacctt aaggaacaaa gatgaacgcc
    11101 caaaccctgc ttgccaacgt tgccgaactc gtcaaaacca agctcaaacc cctcgtcgac
    11161 gacatcgacc gcaaaggata ctaccccgaa gcatttatgc gcgaactcgg cgcaatcggc
    11221 gcagtcggta tagaagccga aggcggcaac ggcttaggct tggcaacacg aatcgccgtc
    11281 ttgcgcgaaa tcggcaaaga atgcggcgcg acctccttca gcgcgtggtg tcaggcggct
    11341 tgcgcgtggt atctgcacca aacgcccaac cgggtcgtca aagaaaaata cctcgccgac
    11401 atcctgcaag gcaaagtatt ggcgggcacc ggaatgtcca ataccgtcaa acaccttgcc
    11461 ggcattgaaa aacacaacct tcaagccgag tgcgtggagg gcggttatac agtcaacggt
    11521 gcgctgccgt gggtgtccaa catcggcgaa gaccacattt gggcgaatac cgcccaaatc
    11581 ggcggcggct acgtcatgtt catcacaggc gggcaaaggg aaggcgtaag cctgcaaaac
    11641 tgccccgaat tttgcgccct cgaaggcacg cgcaccttca gcctgaactt caaagacgta
    11701 tttatccccg acgaagacat catcgccgcg cccgaacagt ttgccggcta catccaaagc
    11761 atcaaagcag gctttatcct cctgcaaatc ggcatcggcg cgggcgtgat agacggcagc
    11821 ctcggcatca tccgcctcgc caacatcgtc aatgcagaag tcaacagcta tctcgacgac
    11881 ggctacgaca gcctcaaagc aaggctggac ggcgcgtggg cagaaaccga acggctcgcc
    11941 ggattggcgt gggacaacac gcccgacaac ctcgccaccc tcaagctgcg cgaagccgcc
    12001 gccgtactgg cccttgccgc tgcgcaatcc gccgccctgc attccggcgc gaaaggctac
    12061 ctgatgcgga gtcccgccca aaggcgcgtc ggcgaagcga tgtttgtcgc catcgtaacc
    12121 cccgcaatca aacacctctg caaagaaata gcagcaatcg aagccgcaaa ataaacaggc
    12181 ggaaaatgcc gtctgaagca caaaccgccc aaggcgggac agatgcggcg gcacgcttca
    12241 gacggcatcc gaaccaaacc ccggcggccc gctgcaaaaa agcacggtac aaacaaggaa
    12301 acacaaatgg ctcaatatat gtgcggcccc tgcggctgga tttacgatga agaactcggc
    12361 gacccggaac acggcatcgc ccccgggaca aagtttgaag acatccccga cgactggaaa
    12421 tgccccgaat gcggcgtggg caaagaagat ttctacctgt tggatttcgt gatatagcgg
    12481 cagccgcacc ccttggaaaa tccctcggcg tgttccgcag ataagcgccg gtatcttttc
    12541 ccacttatcc gcgctttcgc catttgccct ttcaggctgc gggcataggg gcggaacagg
    12601 cggcggtcga atcctgtttc atccggacaa ac
//
LOCUS       DAWXHA010000069        12152 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.069, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000069 DAWXHA010000000
VERSION     DAWXHA010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12152)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12152)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12152
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.069"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            35..1255
                     /locus_tag="AABD07_001434"
     CDS             35..1255
                     /locus_tag="AABD07_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFB2355939.1"
                     /translation="MSGNPINLHKLTFIMLLPSPEARQSSLNLQTLIAEEIGKHGNWI
                     PFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTPLFAQTLARQLQELLPQTAG
                     NIYEFGAGTGQLAADLLGSVSDSINCYYIIEISPELAARQKNLIQARAPEASQKVVHL
                     TALPEAFDGIIIGNELLDAIPVEIVRKNEGGLLEHIGVCTDNGRFAYSARPLHDPSLS
                     TSASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQYYHPQRNQG
                     TLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYLPQSHFLLNLGI
                     TELLAQTGKTDSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGIDWAGFRFGDICH
                     KLQPSCRLNPLQTA"
     gene            1351..1427
                     /locus_tag="AABD07_001435"
     tRNA            1351..1427
                     /locus_tag="AABD07_001435"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1385..1387,aa:Met,seq:cat)
     gene            1435..1510
                     /locus_tag="AABD07_001436"
     tRNA            1435..1510
                     /locus_tag="AABD07_001436"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1468..1470,aa:Ala,seq:ggc)
     gene            complement(1696..2517)
                     /locus_tag="AABD07_001437"
     CDS             complement(1696..2517)
                     /locus_tag="AABD07_001437"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HFB2355940.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFDK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTVMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(2550..3194)
                     /locus_tag="AABD07_001438"
     CDS             complement(2550..3194)
                     /locus_tag="AABD07_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFB2355941.1"
                     /translation="MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEHVVWRPEMLGLARMAAAVKLSGL
                     KYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAVVALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(3197..4066)
                     /gene="ftsN"
                     /locus_tag="AABD07_001439"
     CDS             complement(3197..4066)
                     /gene="ftsN"
                     /locus_tag="AABD07_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFB2355942.1"
                     /translation="MFMNKFSQSGKGLSGFFFGLILATVIIAGILLYLNQGGQNAFKI
                     PAPSKQPAETEILKLKNQPKEGIQPEPADQNALSEPDVAKEAEQSDAEKAADKQPVAD
                     KADEVEEKAGEPEREEPDGQAVRKKALTEEREQTVREKARKKDAETVKKQAVKPSKET
                     EKKASKEEKKAAKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTFGKAEATHYLQ
                     MGAYADRRSAEGQRAKLAILGISSEVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKK
                     HGVASLIRAIEGK"
     gene            complement(4166..5662)
                     /locus_tag="AABD07_001440"
     CDS             complement(4166..5662)
                     /locus_tag="AABD07_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HFB2355943.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECSVPQMPSEHGGQPDLCDVKGQHSARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLAEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARGKQYARQGKVNAALSVSELDSQACIQKEAQEAL
                     GSLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(5676..5996)
                     /locus_tag="AABD07_001441"
     CDS             complement(5676..5996)
                     /locus_tag="AABD07_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HFB2355944.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            6482..8008
                     /gene="putP"
                     /locus_tag="AABD07_001442"
     CDS             6482..8008
                     /gene="putP"
                     /locus_tag="AABD07_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003773641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HFB2355945.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGASTVVVWAEWV
                     KKPARAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSREIQERFEKADADYRAAR
                     "
     gene            8260..11865
                     /gene="putA"
                     /locus_tag="AABD07_001443"
     CDS             8260..11865
                     /gene="putA"
                     /locus_tag="AABD07_001443"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003747536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HFB2355946.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDKQMSSALGRLIGKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDRLIKSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHGDVVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLILGAGD
                     TGAALTNDASIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKAAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALIHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWVHG
                     GSLLQAFCALTELAAAGIRTVVEPGSPLASYSADLDGLLQISGKPENTGVNHVAALSP
                     LDSSRKQELANRDGALIRILPSGQGLDILQVFEEISCSVNTTAAGGNAGLMAVAD"
BASE COUNT         2850 a         3540 c         2983 g         2779 t
ORIGIN      
        1 taaagccatg acagcacccg taccaacgtg taatatgtcg ggaaatccaa taaatttaca
       61 caagctaaca tttatcatgc tcctcccctc ccccgaagca cggcaatcct cgctcaatct
      121 gcaaaccctc attgccgaag aaatcggcaa acacggcaat tggattccat tttcacgttt
      181 tatggaattg gttttatacg ctccgcaata cggctactac accggcggca gccataaaat
      241 cggcaatacc ggggatttta ttaccgcacc gaccctcacc cctctgtttg cacagacact
      301 ggcacgccaa cttcaagaac tcctgcccca aacggcgggc aatatctatg aattcggcgc
      361 gggaaccgga cagcttgccg ccgatttgtt gggcagcgtt tcagacagca tcaactgtta
      421 ctatattatt gaaatatcgc cggagctggc agcacgtcag aaaaacctga ttcaagcccg
      481 tgcaccggaa gcatctcaaa aagttgtcca cttgaccgca cttcccgaag cgtttgacgg
      541 catcatcatc ggcaacgaat tactcgatgc catacctgtc gaaatcgtcc gtaaaaatga
      601 aggaggatta ctcgagcaca tcggcgtttg cacggataac ggccgtttcg cctattctgc
      661 aagacccttg cacgacccgt cgctttccac ctcggcttcc ctctattttc ctcaaacaga
      721 ttatccctat accagcgaac tgcacccgca acaatatgcc tttatccgca cccttgcctc
      781 aaggcttgaa cgcgggggta tgatattcat cgactacggt tttgatgcgg cgcagtatta
      841 ccacccgcaa cgcaatcaag gcacattgat cggacactac cgacaccacg ttatccacaa
      901 tcctttcgac ttcatcgggt tggcagatct gaccgcccac gtcaacttta ccgacattgc
      961 ccaagccggt acggatgcag gactggattt gacaggctat ctgccccagt cccattttct
     1021 gctgaatctg ggcataaccg aactgttggc acagacgggt aaaacagatt cggcagccta
     1081 tatccgtgaa gccgccgctg ttcaaaaact gattgaccag catgaaatgg gcgaactgtt
     1141 taaagtcatc gcattcggaa aaaatatcgg catcgactgg gcaggattcc gcttcggcga
     1201 catctgccac aaactccaac cctcgtgccg tctgaatccg cttcagacgg cataaacttt
     1261 ttaacattta aaaacaagaa actaattcaa aattagaaaa tacggcttgt caaaaaaaca
     1321 aaaaaacata taatagctaa ttcacgaaac ggcgaattag ctcagtcggt tagagcagag
     1381 gaatcataat ccttgtgtcc ggggttcgag tccctgattc gctaccagat tttcgggggt
     1441 atagctcagt tggtagagcg cttgcatggc atgcaagagg tcagcggttc gatcccgctt
     1501 acctccacca gataaaaaag cacagaccgt aaaaggtatg tgctttttta ttgcctgatt
     1561 gccggaaaat aaagaataaa ccactgcctt caaaacaggc aatcgacttt aaacctattg
     1621 ccccgcctgt cctgatttta tcagcccgcc agacaaaccc gacctgaata atgtcttcag
     1681 gtcgggttta tggtttcatt cccaacttat ccagcccgac aaccacaata ttatgatgac
     1741 aatgccgaaa acaatgcggt aataggcaaa cgggatatag tttttcttgg aaacaaactt
     1801 cagcagtgct ttaaccgcta ccaaaccgga aacaaaagcg gcaataaagc ctatcaaaat
     1861 caaaccgaca tcatgcaggg tgaaaaatcg gtaatgtttc aggacatcat aagccgttgc
     1921 tgcaaccatc atcggaacgg ccaagaaaaa tgaaaactcc gttgccgttt tccgctcgat
     1981 tccccaaagc atcccgccca taaccgtact gcccgaacgg gacgtacccg gaaccagtgc
     2041 aaacacttgg gcaacaccga tcatcaacgc atcaatcgga cgcaatgcat caacatcggc
     2101 aattttaggc tctgctcggc tttggcgttt ctccacccac aaaataaaaa aaccgcccaa
     2161 aaccagcatg actgcaacac tcaaggggtt aaacagatac tctttgattt gtttgtcgaa
     2221 caacagcccc atcacggcgg caggtataaa agcaatggca agattgagga cgaaacggtt
     2281 ggctttccgg tcttttccca cgccatgcaa cacattgctg aaacgctgcc ggtattcaaa
     2341 cactaccgcc aaaaccgcac cgagctggat ggcaatttca aaaaccttgt gattgctgtg
     2401 aaaaccaatc agattgccga acacaatcaa atgtccggtg ctggaaatcg gtaaaaattc
     2461 ggtaaaacct tctaccaagc ccatcatcag ggctttcagg acaatcagaa aatccattgc
     2521 ttgcgcttct ttcggatacg ggagttcggc tatttctgta cagcaggggt ctgacgcttg
     2581 cgttcttccc tgactttggc aaccaattct ttaatcgtat gaacgccgcc atcaaagcca
     2641 ttattgaaga taacgcggta ttttccgccg acaataacgg tcggcgtgct gtcaataccg
     2701 tattgttccg tcagtttctg catttttaat gcgacgacgg cagcttcggg ggaatcatag
     2761 gcgcgcatca gttttttgcc gtcaaaacct ttttgagata aagcccattt tccggcaaca
     2821 gccctgtttt ccaaacggat tttttgttcg taaactgctt taaacacagc agagtttgcc
     2881 tgatatttca aacccgacag cttgaccgca gcagccattc ttgccagacc gagcatttca
     2941 ggccgccaga ccacgtgctc cgtccgcaga taagtatcag acggcaatgc cttgcccagt
     3001 ttcaataaca aaggatcgaa atgatggcaa tgtacgcaaa aatagccgaa aaattccaaa
     3061 acctcaattt ttcccggctg ttcttgagga atgggtttat ccaacacaag atagtcttcc
     3121 ccttccgtca gggcatatgc ctgcgcggac aacactgccg acagcagcag cggcaacaga
     3181 tgtttaaact tcataattat ttgccttcaa tcgcacggat caggctggca accccatgct
     3241 ttttcaactc gtcctgcatt tttttcaccg catcggcaga catattgccg ctttgcacgc
     3301 ggtaaagcgt tttatgtccc gcctgatagc cgaccacttc ggaagatatg cccaagattg
     3361 ccagtttggc acgctgccct tccgcgctcc ggcggtcggc atacgcgccc atttgcagat
     3421 aatgcgttgc ttccgccttg ccaaacgttt tcattttctg cacttctttg gcagcggcac
     3481 tgcgcgcttt ttcgatgctg ccgctgttga ggatttgttc cggggtcggt ttgggtgcaa
     3541 ctttttcctt cgccgccttt ttctcttctt ttgaagcttt tttctctgtt tctttagacg
     3601 gttttaccgc ttgtttttta accgtttcgg catctttctt ccgcgctttt tccctgacgg
     3661 tttgttcacg ctcttccgtc agtgctttct tgcgcactgc ctgtccgtcc ggctcttccc
     3721 gttccggctc gcccgccttt tcttcaacct cgtcggcttt gtcggcaacg ggctgcttgt
     3781 cggcagcttt ttccgcatcc gactgctctg cctctttcgc aacatccggt tcggacaagg
     3841 cgttttgatc ggccggttca ggttggatgc cttccttagg ctggtttttc agtttcagga
     3901 tttccgtttc tgcaggctgc ttcgacggag ccgggatttt gaacgcattt tgaccgccct
     3961 ggttcagata aagcaaaata ccggcaataa tgaccgttgc cagtatcaaa ccgaagaaga
     4021 aaccggacag accttttccg gattgggaaa atttgttcat aaacatacct taatgtgttt
     4081 cagacggcat taacgccgtt tgcttacggg cggatattct aacaatatcg ccatatttgg
     4141 gcaaaacctg cttccattcc cgttcctata aagcacgacg gaagcctatg gctttcatga
     4201 cgtggcttct gccgacttct tcatcgcccg ccaaatccgc caatgtacgc gccacgcgca
     4261 taatgcggtg gaagctgcgg gcggaaagag acaatttttc cagcaggcta cccaaggctt
     4321 cctgcgcttc tttttggatg caggcttggg aatcgagttc gctgacgctc aaagcggcgt
     4381 tgactttgcc ctgccgtgcg tattgtttgc cgcgggcggc gatgacgcgt tccaaaacgg
     4441 acgcactgct ttcgcccgct tcctgctgca tcagttcggc ggcggacagg ctggggactt
     4501 cgatggtcaa atcgatgcgg tcgagcagcg gaccggaaat tttgcttcgg taacgcgcga
     4561 cactttcggg cgtgcagcgg cagggtttga cgggatgccc gagataaccg cacggacacg
     4621 ggttcatggc agcgacaagc tggaatttgg cgggatagac ggcttggcgc gccgcgcggg
     4681 aaatgtggat ttcgccgttt tccaacggtt cgcgcaaaac ctccaaaact ttgcggtcga
     4741 actcgggcaa ttcgtccaaa aataaaacgc cgtgatgcgc caatgaaatc tcgcccggac
     4801 gcggatccga gccgccgccg accatagccg ccgcgctggc gctgtgatgc ggactgcgga
     4861 aaggacggtt gctgtcgagt tgttgttggt ggttgggcag gagcgaacgc aatgcccaaa
     4921 cttctaccaa ttcgtcttcg gccagcggcg gcaggatgcc gggcagccgt tgggagagca
     4981 tagacttgcc tgttcccggc gggcccatca tcaagaggct gtgtccgcct gcggcggcga
     5041 tttccaaagc aaggcgggca gagtgctgac ctttcacatc acacaaatca ggttgtccgc
     5101 catgttcaga cggcatttgc ggtacggaac attcggtttg cgccaaaggt tcgataccgt
     5161 tcaaatgagc ggcgacttcg cccaaagagc gcgcgccgta aacggtaatg ccgcgcatca
     5221 cggcggcttg tcctgcgttt tcttcaggca aaacaaatgc acgttttgcc tgcataccct
     5281 gccacgccat cgccaacgcg ccgcgcacgg ggcgcaacaa ccccgacagt gccaattccc
     5341 ccgcaaactc gtattccgcc agcttttcgg gtgcaacctg ccccgatgcg gcaaggatgc
     5401 cgattgcaat cggcaaatcg aaacgccccg actctttggg caggtcggca ggggcgaggt
     5461 tgacggtgat ttttttggcg gggaattcaa aaccgctttg aataatggcg gcacggacgc
     5521 ggtcgcggct ttcctttact tccgtatcgg gcagtccgac gatgttgaaa tgcggcagac
     5581 cgttggcaag gtgggcttcc acttcgacca acggcgcatt cataccgctc aaggcgcggc
     5641 tgtaaaccaa ggcaagcgac atatttcaga cggccttatt cgccggcttc ggtttgctgc
     5701 ctgatttcgg cgacggcttc ttcggcagcg gcttcagccg cttccaatgc tgcccgttcg
     5761 ggattttgcg cggcttcgag tttcgccaga cgtgcttcca aagccgccag tttggtacgg
     5821 gttttaatca aaacctgctg ctggatgtcg aattcttcgc gcgtaaccaa atccatacgg
     5881 ttgaacgcgc cgcccagcat cgccttaata tttttttcca catctttggc agggctgttg
     5941 gcgatggttt cgctgatttt cgagccgact tcttcaaaaa gctgcttgcc gaacataatc
     6001 tgcatccttc ctgaacatca aattcaagcg gctattgtat aaggaaaaat gccgtctgaa
     6061 aacgggcggc ggataatcgt caaaacatac cgcgccccct ttgcggttgc taaaattaca
     6121 cttcgagaca cctgccgcct gaaaacggat ttcatattcc gcgcaacgcc cgattacatt
     6181 acaagacact acaaaacaat atgctgtttt aaatgatttt tccgatgcgc atcgtttcaa
     6241 actcggcttt ttaagccatt aagtgctttg caaacaacag aaattgggtt atgctgaaac
     6301 ggattattta caatttcata tagtttcatt acatatctta ttgtaattga agataattta
     6361 tccgaatccc ctttcgggta tccggatttt ccgttgtact ttcattagaa aaacatttca
     6421 ggcgcaagtt gcttgcaatt tcaaagcctg taattctgaa gttttagacg aggaatagca
     6481 catgaatccc atgtacatca cttttgcaat ctatttggtt gcagtccttc tcatcgggct
     6541 tgccgcttat ttttccacgc gcaatttcga tgattatatt ttgggcgggc gcagcctggg
     6601 tccgtttgtt acggcgatgt cggcaggcgc gtccgatatg tccggctggc ttttgatggg
     6661 tctgccgggc gcgatttatt tgagcggttt gaatgaggct tggattgcca tcggcctctt
     6721 ggtcggcgcg tatttcaact ggctcttggt ggcgggccgc ctgcgcgtgc ataccgaata
     6781 tgccaacaat gcgctgacgc tgccggatta tttcttccac cgcttcggcg cgggcggaca
     6841 cttgatgaaa gtggtttccg cactgattat cctgtttttc ttcacgattt attgcgcctc
     6901 gggcattgtg gcgggcgcaa ccctgttcca aagcctgttt gaaggtatga cttacaatca
     6961 ggcaatgtgg ctgggcgcgg gcgcgaccat cgcctatacc ttcttgggcg gcttcttggc
     7021 ggtcagctgg acggatacgc tgcaggcttc tttgatgatt ttcgccctga ttttaacgcc
     7081 ggtgatggtc tatctgggct tgggcggcgc ggaacagatg tctgccgcga ttcaaagcgt
     7141 cgccgcaggc acgggcaaag aatacggcag cctgtttgcc ggtacgaccg tcatcggcat
     7201 catttccacc gccgcctggg gcttgggcta tttcggacag ccgcacattt tggcgcgctt
     7261 tatggccgcc gaaagcgcga aatcgctggt atccgcacgc cgcatcggca tgacttggat
     7321 ggcgttgtgc cttgcgggcg cggtagcggt cggttatttc ggcattgcgt atttcggtgc
     7381 aaaccccgac aaagtttctt ctatgagcgg caaccacgaa cgcatcttca tcgcgctttc
     7441 caccctgctg ttcaaccctt ggatcgccgg catcattttg agcgcgattt tggcggcggt
     7501 gatgtccacc ctgtcctgcc agcttttggt ttgctccagc gcgattaccg aagacttcta
     7561 caaaggcttt ttgcgtaaaa acgcgcaaca gtcggaattg gtatgggtcg gccgcctgat
     7621 ggtattggcg attgccgtga tttccatcct gattgcttcc gatccgaaca gcaaagtatt
     7681 gggactggtg tcttacgcgt gggcaggttt cggtgcggca ttcggcccga ttgtgattct
     7741 gtccgtattg tggaaacgca tcactgccta cggcgcgttg tcaggcatgg ttgcaggtgc
     7801 gtcaaccgtt gttgtgtggg cggaatgggt aaaaaaaccg gctcgagcgg caggcgaaag
     7861 cggcttgttg acgatgtacg aaatcgtccc gggctttatt gtttgcttga tcgttgccgt
     7921 gttggtttcc ctgttcaaca aagaaccttc gcgcgaaatc caagaacgct ttgaaaaagc
     7981 cgacgcagat taccgcgccg cccgataaac ccctttcaga cggcacggca tcccggttcg
     8041 tgccgtctga acccgcttcc gggccaaaca caaataaacc ttgcctgcat acaggcctta
     8101 tttgtgtttt acccgtttca ttttcaaaga aacggaagca ccgattctgc ccgcatttga
     8161 agccttgtat ttcatctgcg gatttattac gatattaccg tattcaggcc gcaccgatgc
     8221 cgtctgaacc ccccgaaaaa actttggagg atccaaaaaa tgtttcattt tgcatttccg
     8281 gcacaaactg ccctgcgcca agcgataacc gatgcctacc gccgtaatga aatcgaagcc
     8341 gtacaggata tgttgcaacg tgcacagatg agtgacgaag agcgcaacgc cgcctccgag
     8401 cttgcccgcc gtttggttac ccaagtccgc gccggccgca ccaaagccgg cggcgtggat
     8461 gcgctgatgc acgagttttc actctccagc gaagaaggca tcgcgctgat gtgtctggca
     8521 gaagccctgc tgcgtatccc cgacaacgcc acgcgcgacc gcctgattgc cgacaagatt
     8581 tcagacggca actggaaaag ccatttgaac aacagccctt ccctcttcgt caatgctgcc
     8641 gcctggggtc tgctgattac cggcaagctg accgccacaa acgacaaaca aatgagttcc
     8701 gcactcggcc gcctgatcgg caaaggcggc gcaccgctca tccgccaagg cgtaaattac
     8761 gccatgcggc ttctgggcaa acagttcgtc accggacaga ccattgaaga agccctgcaa
     8821 aacggcaaag aacgcgaaaa aatgggctac cgcttctcct tcgatatgtt gggcgaagcc
     8881 gcctacaccc aagccgatgc cgaccgctac taccgcgact atgtcgaagc catccacgcc
     8941 atcggcaaag atgcggcagg acaaggcgtt tacgaaggca acggcatttc cgtcaaactc
     9001 tccgccatcc atccgcgcta ctcgcgcgcc caacacggcc gcgtgatggg cgaactgttg
     9061 cctcgcctga aagaattgtt ccttttgggt aaaaaatacg atatcggtat caacatcgat
     9121 gccgaagaag ccaaccgtct ggagctgtct ttggatttga tggaggcact cgtttccgac
     9181 cccgatttgg ccggctacaa aggcatcggt ttcgttgttc aagcctacca aaaacgctgc
     9241 ccgttcgtca tcgactatct gattgacctg gcccgccgca acaaccaaaa actgatgatc
     9301 cgcctcgtca aaggcgcgta ttgggacagc gaaatcaaat gggcgcaagt ggacggcttg
     9361 aacggctatc cgacctacac ccgcaaagtg cataccgaca tctcctacct cgcctgcgcg
     9421 cgcaaactgc tttccgcgca agacgcggta ttcccgcaat tcgccaccca caacgcctac
     9481 accttgggcg caatctacca aatgggcaaa ggcaaagatt ttgaacacca atgcctgcac
     9541 ggtatgggcg aaaccttgta cgaccaagtc gtcggtccgc aaaacttagg ccgccgcgtg
     9601 cgcgtgtacg ccccggtcgg cacacacgaa accctgctcg cctacttggt gcgccgcctg
     9661 ttggaaaacg gcgcgaactc gtctttcgtc aaccaaatcg ttgatgaaaa catcagcatc
     9721 gaccgcctga ttaagagccc gttcgacacc atcgccgaac aaggcatcca cctgcacaac
     9781 gccctgccgc tgccgcgcga tttgtacggc aaatgccgtc tgaactcgca aggcgtggac
     9841 ttgagcaacg aaaacgtatt gcagcagctt caagaacaga tgaacaaagc cgccgcacaa
     9901 gacttccacg ccgcatccat cgtcaacggc aaagcccgcg atgtcggcga agcgcaaccg
     9961 attaaaaacc ctgccgacca cggcgatgtt gtcggtacgg tcagctttgc cgatgccgcg
    10021 cttgcccaag aagcggttgg cgcagccgtt gccgcgttcc ccgaatggag tgcgacacct
    10081 gccgccgaac gcgccgcctg cctgcgccgt ttcgccgacc tgctcgaaca gcacaccccc
    10141 gcgctgatga tgcttgccgt gcgcgaagcg ggcaaaacgc tgaacaacgc cattgccgaa
    10201 gtgcgcgaag ccgtcgattt ctgccgctac tacgcaaacg aagccgaaca caccctgcct
    10261 caagacgcaa aagccgtcgg cgcgattgtc gccatcagcc cgtggaactt cccgctcgcc
    10321 atctttaccg gcgaagtcgt gtccgccctg gcggcaggca acaccgtcat cgccaaacct
    10381 gccgaacaaa ccagcctgat tgccggttat gccgtttccc tcatgcacga agccggcatc
    10441 ccgacttccg ccctgcaact catcctcggc gcaggcgaca cgggtgcggc attgaccaac
    10501 gatgccagca tcggcggcgt gattttcaca ggctcgaccg aagtggcgcg cctgatcaac
    10561 aaagcccttg ccaaacgcgg cgacaatccc gtcctgattg ccgaaaccgg cggacaaaac
    10621 gccatgattg tcgattccac cgcacttgcc gaacaagtct gcgccgacgt attgaactcc
    10681 gccttcgaca gcgcgggaca acgctgctcc gccctgcgta tcttatgcgt ccaagaagac
    10741 gttgccgacc gtatgctcga catgatcaaa ggcgcgatgg acgaactcgt cgtcggcaaa
    10801 ccgattcagc tcactaccga tgtcggcccc gtcatcgatg ccgaagcgca gcaaaacctg
    10861 ttgaaccaca tcaacaaaat gaaaggcgtt gccaagtctt accacgaagt caaagccgcc
    10921 gccgatgtcg attccgaaaa atccacgttc gttcgcccca tcctgtttga attgaacaac
    10981 ctcaacgaac tgcaacgcga agtcttcggc cccgtcctgc acgtcgtccg ctaccgcgcc
    11041 gacgaactcg acagcgtcat cgaccaaatc aacagcaaag gctacgccct gacccacggc
    11101 gtacacagcc gcatcgaagg cacggtacgc cacatccgca gccgcatcga agccggcaac
    11161 gtttacgtca accgcaacat cgtcggtgca gtcgtcggcg tacagccctt cggcggacac
    11221 ggtctgtccg gcacaggccc caaagcagga ggttcgttct acctgcaaaa actgacccgc
    11281 atccccgaat gggttgcccc gaccctgagc caaatcggac aggcagacga agccgcgctc
    11341 aaacgcctcg aagccctgat tcacaaactg ccgttcaacg ccgaagagaa aaaagccgca
    11401 gcggccgctt tgggacacgc ccgcatccgc accctgcgcc gtgccgaaac cgtccttacc
    11461 ggcccgaccg gcgagcgcaa cagcatctca tggcacgcgc caaaacgcgt ctgggtacac
    11521 ggcggcagcc tcctgcaggc cttctgcgcc ctgaccgaac ttgccgccgc cggcatccga
    11581 accgtcgtcg aacccggcag cccgttggct tcctactcgg ccgacttgga cggtttgctg
    11641 caaatcagcg gcaaacccga aaacaccggt gtgaaccacg tcgccgccct aagcccactg
    11701 gacagcagcc gcaagcagga actggcaaac cgcgacggcg cactcatccg catcctcccg
    11761 tccggacaag gcttggacat cctgcaagtg tttgaagaaa tttcttgcag cgtcaacacc
    11821 acagccgccg gcggcaacgc cggcctgatg gcggttgccg actgattttg ccaaaccgcc
    11881 cgggcgcggc ccgtgaacaa atgccgtctg aaaacctttc aggcggcatt ttatagtgga
    11941 ttaacaaaaa tcaggacaag gcggcgagcc gcagacagta caaatagtac ggcaaggcgg
    12001 gccaacgctg tactggttta aattcaattc actatatgtg ttggcacatc gctccaaacc
    12061 tgatataatc cgcctttcaa catcagtgaa aatctttttt taaccggtca aaccgatata
    12121 aggagccaaa aatgaatcca gcccgcaaaa aa
//
LOCUS       DAWXHA010000070        12052 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.070, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000070 DAWXHA010000000
VERSION     DAWXHA010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12052
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.070"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            58..603
                     /gene="def"
                     /locus_tag="AABD07_001444"
     CDS             58..603
                     /gene="def"
                     /locus_tag="AABD07_001444"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HFB2355947.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LVADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDAVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            691..1617
                     /locus_tag="AABD07_001445"
     CDS             691..1617
                     /locus_tag="AABD07_001445"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HFB2355948.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     ADIIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGES
                     ALKITELQPAGGRRMNIAAFAAGRSIEAGAKL"
     gene            1696..2955
                     /gene="rsmB"
                     /locus_tag="AABD07_001446"
     CDS             1696..2955
                     /gene="rsmB"
                     /locus_tag="AABD07_001446"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HFB2355949.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAHIRAAHPQLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLREREKLAASCKKDDVAKYNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLAVEGIAAKALDEYAVTLEEAVPVNRL
                     PGFAEGLVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAVLADMPCTASGVARRNPD
                     VKWLRRPTDAAKTARRQEALLDALWQVLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            2921..3520
                     /locus_tag="AABD07_001447"
     CDS             2921..3520
                     /locus_tag="AABD07_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HFB2355950.1"
                     /translation="MAFITRLFKSIKQWLVLLPILSVLPDAAAEGIAATRAEARITDG
                     GRLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPTIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            3520..5640
                     /locus_tag="AABD07_001448"
     CDS             3520..5640
                     /locus_tag="AABD07_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HFB2355951.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVSFSAMLL
                     LVLSAVLACYVILLLKDRRNGVFGSQIAKRLSGMFTLVAVLPGLFLFGISAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALDLAADNAVSNAVPVQIDLIGTASLSGNMGSVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHQFDQPLPDKEHWEQIQQTGSVRSLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPIPENVAQDAVLIEKARAKYAELSYSKKGLQTFFLVTL
                     LIASLLSIFLALVMALYFARRFVEPILSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLDGLTTGVVVFDEKGRLKTFNKAAE
                     QILGMPLAPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVQVEYAAPDDAKIL
                     LGKATVLPEDNGNGVVMVIDDITVLIRAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDDQDAQILTRSTDTIIKQVAALKEMVEAFRNYARAPSLKLENQDLNALI
                     GDVLALYEAGPCRFEAELAGEPLMMAADTTAMRQVLHNIFKNAAEAAEEADMPEVRVK
                     SETGQDGRIVLTVCDNGKGFGKEMLHNAFEPYVTDKPAGTGLGLPVVKKIIGEHGGRI
                     SLSNQDAGGACVRIILPKTVETYA"
     gene            5633..6910
                     /locus_tag="AABD07_001449"
     CDS             5633..6910
                     /locus_tag="AABD07_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HFB2355952.1"
                     /translation="MRSSDILIVDDEVGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVVMSGHASIDTAVEATKIGAIDF
                     LEKPISLQKLLSAVENALKHGAAQIETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQTGITFIIGKAERCRVRVIASCSYAAGSDGISCEEKLAGLFSESVVRIPPLSMQHE
                     DIPFLIQGIACNVAESQKITPTAFSDDALAVLSRYDWPGNFEQLQNVVTTLLLEADGQ
                     EIGIGAASSALGRGVPADGTGHMACGFDFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            7001..8188
                     /gene="dprA"
                     /locus_tag="AABD07_001450"
     CDS             7001..8188
                     /gene="dprA"
                     /locus_tag="AABD07_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HFB2355953.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQV
                     APAVRHKHALEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPANKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPVHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            8214..8675
                     /locus_tag="AABD07_001451"
     CDS             8214..8675
                     /locus_tag="AABD07_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HFB2355954.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPAGSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            8747..11053
                     /gene="topA"
                     /locus_tag="AABD07_001452"
     CDS             8747..11053
                     /gene="topA"
                     /locus_tag="AABD07_001452"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HFB2355955.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAAAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPDEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEESEDGKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRRWIPVMDKFWKPFIKQVE
                     EKEGIERAKFTTQELNETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLAYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKT
                     TKRRGVEKVCPQKECGWKEQIEPPAPQE"
     gene            11301..11936
                     /locus_tag="AABD07_001453"
                     /pseudo
     CDS             11301..11936
                     /locus_tag="AABD07_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         2972 a         3313 c         3421 g         2346 t
ORIGIN      
        1 cgtgataaca aatgttccgc attttaacat cgaattatcc gtaccatcac ggtaattatg
       61 aaaaacaggc ggcgtatccg ccgaaggaaa gagaaaatta tggctttact gaatatcttg
      121 caatatcccg acgagcgtct gcacacggtg gcaaagcctg tcgaacaagt tgacgagcgc
      181 atccggaagc tggttgccga tatgtttgaa acgatgtacg aatcgcgcgg catcgggctg
      241 gcggcgacgc aggtcgatgt gcacgaacgc gtggtcgtga tggatttgac cgaagaccgc
      301 agcgaaccgc gcgtgttcat caaccccgtc atcgttgaaa aagacggcga aaccacttac
      361 gaagagggct gcctgtccgt accgggcatt tacgacgccg ttacccgcgc cgaacgcgtc
      421 aaggtcgagg ctttgaacga aaaaggcgaa aaattcacgc tggaggcgga cgggctgctg
      481 gcgatttgcg tgcagcacga gttagatcac ctgatgggca tcgtgtttgt cgaacgcctt
      541 tcccaactca agcaggggcg gattaagacc aaactgaaaa aacgtcagaa acatacgatt
      601 tgattcgctt cgtcatgccg tctgaacgct gcaaggcttt cagacggcac agccttgtcc
      661 gacaacttta cgcacacgca ggaacacgct atgaaagtca tctttgccgg cacgcccgat
      721 tttgccgccg ccgccttaaa agccgttgcc gccgccggtt ttgaaatccc gctggtgctg
      781 acccagcccg accgtccgaa agggcgcggt atgcaactga ccgccccgcc tgtcaaacaa
      841 gccgcgctgg aactcggttt gcgcgtggca cagcccgaaa aactgcgcaa caacgccgaa
      901 gccctgcaaa tgctcaaaga ggtcgaggcg gacgtaatgg tggttgccgc gtacggcttg
      961 attctgccgc aggacgtgtt ggatacgccg aaacacggct gcctcaatat ccatgcttcg
     1021 ctgctgcccc gttggcgcgg cgcggcgccg attcagcgcg cgattgaggc cggcgatgcc
     1081 gaaaccggcg tgtgcattat gcagatggac atcggtttgg acaccggcga tgtggtcagc
     1141 gaacaccgct acgccatcca acctaccgat actgccaacg aagtccacga cgcgctgatg
     1201 gaaatcggtg cggcggcggt tgttgccgat ttgcaacagc ttcaaagcaa aggccgtctg
     1261 aacgcggtca aacagcccga agaaggcgta acttacgccc aaaaactaag caaagaagaa
     1321 gcgcgtatcg attggagcga aagcgcggac attatcgaac gcaaaatccg cgccttcaac
     1381 cccgtgcctg ccgcgtgggt cgaatatcag ggcaagccga tgaaaatccg gcgtgccgaa
     1441 gtggtggcgc aacaaggtac ggcaggcgaa gtgttgtcct gttcggcgga cggtttggtc
     1501 gttgcctgcg gcgaaagcgc gctgaagatt accgaattgc agcctgccgg cggcaggcgt
     1561 atgaatattg cggcgtttgc ggcgggacgg tctattgaag caggggcgaa gctgtaaatc
     1621 ccttcagacg gcattccgat ccgcaaacgg gaatgccgtc tgaaaccatc agttgaagaa
     1681 agcgaatcac ataatatgag tatggcactt gcccaaaaac ttgccgccga cagcattgcg
     1741 gcggttgccg aagggcgcaa ccttcaggac gtgttggcgc acatccgcgc ggcgcatccg
     1801 cagctgacgg cgcaggaaaa cggcgcattg caggatatcg cctacggctg ccagcgttat
     1861 ttgggcagtt tgaaacatat gctcgcgcag atgctgaaaa agcccatcga caatccgcag
     1921 ctcgaaagcc tgcttttggc ggcgttgtac caactgcatt acacgcgcaa cgcgccccac
     1981 gccgtggtca acgaagctgt tgaaagcata gccaaaatcg ggcgcgggca gtaccgttcg
     2041 tttgccaacg cggttttgcg ccgctttttg cgcgaacgtg aaaaattggc ggcttcctgc
     2101 aaaaaagacg atgtggcgaa atacaacctg ccgctgtggt gggttgccta cctgaaaaac
     2161 cattatccga aacactggca caacatcgcc gccgcgctgc aatcccatcc gccgatgacg
     2221 ttgcgcgtca accgccggca cggcaacgcc gaaagctatt tggaaaaact ggctgtggaa
     2281 ggtatcgcgg ctaaggcgtt ggacgaatat gcggttacgt tggaagaagc cgtgccggta
     2341 aaccgtctgc ccggttttgc cgaaggactg gtgtcggtac aggacttcgg cgcgcagcag
     2401 gcggcgtatc tccttaaccc gaaagacggc gaacggattt tggacgcgtg cgccgcgccg
     2461 ggcggcaaga cggggcatat tttggaactg gcggactgcc gcgttaccgc cttggacatc
     2521 gatgcaggcc gtctgaagcg tgtggaggac aatatcgccc gtttgggctt tcagacggca
     2581 tcggcggcgt gtgccgatgc gcgggatttg gcggcgtggt atgatgggaa accgtttgat
     2641 gccgtccttg ccgacatgcc gtgcaccgct tccggcgtgg cgcggcgcaa tcccgacgtg
     2701 aaatggctgc gccgcccgac cgatgccgcc aaaaccgccc gccggcagga agccctgctg
     2761 gacgcattgt ggcaggtgct gaaacagggc ggcagaatgc tgcttgccac ctgttccgtg
     2821 ttcgtcgaag aaaacgacgg gcaactgcaa aaattcctca accgccatgc cgatgccgaa
     2881 ccgatcgaat cgcgggtgct tttaccgaac aaacaccaag atggctttta ttacgcgctt
     2941 attcaaaagc attaaacaat ggcttgtgct gctgccgata ctctccgttt tgccggacgc
     3001 ggcggcggag ggcattgccg cgacccgcgc cgaagcgagg ataaccgacg gcgggcggct
     3061 ttccatcagc agccgcttcc aaaccgagct gcccgaccag ctccaacagg cgttgcgccg
     3121 gggcgtaccg ctcaacttta ccttaagctg gcagctttcc gccccgacaa tcgcttctta
     3181 tcggtttaaa ttggggcaac tgattggcga tgacgacaat attgactaca aactgagttt
     3241 ccatccgctg accaaccgct accgcgttac cgtcggcgca ttttccaccg attacgacac
     3301 tttggatgcg gcattgcgcg cgaccggcgc ggttgccaac tggaaagtcc tgaacaaagg
     3361 cgcgttgtcc ggtgcggaag caggggaaac caaggcggaa atccgcctga cgctgtccac
     3421 ttcaaaactg cccaagcctt tccaaatcaa tgcattgact tctcaaaact ggcatttgga
     3481 ttcgggttgg aaacctctaa acatcatcgg gaacaaataa tgcgccgctt cctaccgatc
     3541 gcagccatat gcgccgtcgt cctgctgtac ggattgacgg cggcgaccgg cagcaccagt
     3601 tcgctggcgg attatttctg gtggatagtc tcgttcagcg caatgctgct gctggtgttg
     3661 tccgccgttt tggcatgtta tgtcatattg ctgttgaaag acaggcgcaa cggcgtgttc
     3721 ggttcgcaga ttgccaaacg cctttccggg atgttcacgc tggtcgccgt actgcccggc
     3781 ttgttcctgt tcggcatttc cgcgcagttt atcaacggca cgattaattc gtggttcggc
     3841 aacgacaccc acgaagccct cgaacgcagc cttaatttga gcaagtccgc actggatttg
     3901 gcggcagaca atgccgtcag caacgccgtt cccgtacaga tagacctcat cggcaccgcc
     3961 tccctgtcgg gcaatatggg cagtgtgctg gaacactacg ccggcagcgg ttttgcccag
     4021 cttgccctgt acaatgccgc aagcgggaaa atcgaaaaaa gcatcaatcc gcaccaattc
     4081 gaccagccgc ttcccgacaa agaacattgg gaacagattc agcagaccgg ttcggttcgg
     4141 agtttggaaa gcataggcgg cgtattgtac gcgcagggat ggttgtcggc aggtacgcac
     4201 aacgggcgcg attacgcgct gttcttccgc cagccgattc ccgaaaatgt ggcacaggat
     4261 gccgttctga ttgaaaaggc gcgggcgaaa tatgccgaat tgagttacag caaaaaaggt
     4321 ttgcagacct tttttctggt aaccctgctg attgcctcgc tgctgtcgat ttttcttgcg
     4381 ctggtcatgg cactgtattt tgcccgccgt ttcgtcgaac ccattctgtc gcttgccgag
     4441 ggcgcaaagg cggtggcgca gggtgatttc agccagacgc gccccgtatt gcgcaacgac
     4501 gagttcggac gtttgaccaa gctgttcaac catatgaccg agcagctttc catcgccaaa
     4561 gaagcagacg aacgcaaccg ccggcgcgag gaagccgccc gccactacct cgagtgcgtg
     4621 ttggatgggt tgactaccgg tgtggtggtg tttgacgaaa aaggccgttt gaaaaccttc
     4681 aacaaggcgg cggaacagat tttggggatg ccgctcgccc ccctgtgggg cagcagccgg
     4741 cacggttggc acggcgtttc ggcacagcag tccctgcttg ccgaagtgtt tgccgccatc
     4801 ggtgcggcgg caggtacgga caaaccggtc caggtggaat atgccgcgcc ggacgatgcc
     4861 aaaatcctgc tgggcaaggc gacggtattg cccgaagaca acggcaacgg cgtggtgatg
     4921 gtgattgacg acatcaccgt gctgatacgc gcgcaaaaag aagccgcgtg gggtgaagtg
     4981 gcgaagcggc tggcacacga aatccgcaat ccgctcacgc ccatccagct ttccgccgaa
     5041 cggctggcgt ggaaattggg cgggaagctg gacgatcagg acgcgcaaat cctgacgcgt
     5101 tcgaccgaca ccatcatcaa acaggtggcg gcgttaaaag aaatggtcga ggcattccgc
     5161 aattacgcgc gcgccccttc gctcaaactg gaaaatcagg atttgaacgc cttaatcggc
     5221 gatgttttgg ccctgtacga agccggcccg tgccggtttg aggcggaact tgccggcgaa
     5281 ccgctgatga tggcggcgga tacgaccgcc atgcggcagg tgctgcacaa tattttcaaa
     5341 aatgccgccg aagcggcgga agaagccgat atgcccgaag tcagggtaaa atcggaaacg
     5401 gggcaggacg gacggattgt cctgacggtt tgcgacaacg gcaagggatt cggcaaggaa
     5461 atgctgcaca atgctttcga gccgtatgtg acggataagc cggcgggaac gggactgggt
     5521 ctgcctgtag tgaaaaaaat cattggagaa cacggcggcc gcatcagcct gagcaatcag
     5581 gatgcgggtg gggcgtgtgt cagaatcatc ttgccaaaaa cggtagaaac ttatgcgtag
     5641 cagcgatatt ttaattgtag acgacgaagt cggcatccgc gacctgctgt cggaaatcct
     5701 gcaggacgaa ggctattcgg tcgcgttggc ggaaaatgcc gaagaggcgc gcaagctgcg
     5761 ccatcaggcg cgcccggcaa tggtgctgct ggatatttgg atgcccgatt gcgacggtat
     5821 cacccttttg aaggagtggg cgaaaaacgg gcagctcaat atgccggtgg tggtgatgag
     5881 cgggcatgcc agcatcgata ccgccgtaga agcgaccaaa atcggcgcga tcgatttttt
     5941 ggaaaaaccg atttccctgc aaaagctgct gtctgcggtc gaaaacgcgt tgaaacacgg
     6001 tgcggcgcaa atcgaaacgg gaccggtgtt cgacaaactg ggcaacagtg ccgcgattca
     6061 agagatgaac cgcgaagtcg aagcggcggc aaagcgcacg tcccctgtat ttttgacggg
     6121 cgaggcgggt tcgccgtttg aaaccgtggc gcgctatttc cataaaaacg gtacgccgtg
     6181 ggtcagtccg gcaagggtcg aatatctgat cgatatgccg atggaactgt tgcagaaggc
     6241 ggagggcggc gttttgtatg tcggcgacat cgcccaatac agccgcaata tccaaaccgg
     6301 cattaccttt atcatcggca aggcagaacg ctgccgtgtc agggtgattg cttcgtgcag
     6361 ctacgcggca ggttcagacg gcatttcatg tgaagaaaaa ttggccgggc ttttttcgga
     6421 atcggtcgtc cgtattccgc ccctgagtat gcagcatgaa gacattccct tcctgataca
     6481 ggggattgcc tgcaatgtgg cggaaagcca aaaaatcacg cctaccgcat tcagtgacga
     6541 tgcgcttgcc gtattgtccc gttacgactg gccggggaat ttcgagcagt tgcaaaacgt
     6601 cgtgacaacg ctgctgctgg aggcggacgg gcaggaaatc ggtatcggcg cggcttcttc
     6661 ggcactgggg cgcggtgtgc ctgccgacgg aacggggcat atggcgtgcg ggttcgactt
     6721 taacctgccg ctgcgcgaat taagggagga ggtggagcgg cgttatttcg agtaccacat
     6781 cgcccaagaa ggtcagaata tgagcaaagt ggcgcagaag gtcggtttgg aacgcacgca
     6841 cctttaccgc aaactcaaac agctcggcat cggcgtttcg cgccgggcgg gggaaaaaac
     6901 cgaagaatag gcccggacgg ccggtttccc ggctgcgggc ttttgttttc agacggcatt
     6961 tggagaaaat gccgtctgga atcgtaaggg gatggatttt atgacagagg acgaacgttt
     7021 cgcgtggctg caattggcgt ttacgcccta tatcggcgcg gaaagtttcc tgctgctgat
     7081 gcgcagtttc ggcagcgcgc aaaatgcctt gtccgcaccg gcggaacagg ttgccccggc
     7141 ggtgcggcat aagcacgcgc ttgaggcttg gcgcaatgcg gaaaaacgcg ctttggcgcg
     7201 gcaggcggca gaagcggcgt tggaatggga aatgcgggac ggatgccgcc tgatgctgct
     7261 tcaggatgaa gatttccccg aaatgctgac gcaggggctg accgcgccgc cggttttgtt
     7321 tttgcgcggc aacgtgcggc tgctgcacaa gccttccgcc gccatcgtcg gcagccgcca
     7381 tgccacgccg caggcgatgc ggattgccaa agatttcggc agggcgttgg gtgggaaagg
     7441 cattcctacc gtgtcgggta tggcttcggg catcgacacc gccgcccatc agggcgcact
     7501 ggaggcagaa ggcggcacca tcgccgtgtg ggggacgggc atagaccgca tttatccgcc
     7561 ggccaacaaa aaccttgcct atgaaatcgc cgaaaaaggg ctgattgtca gcgagttccc
     7621 catcggcacg cggccgtatg ccggcaactt tccgcgccgc aaccgcctga ttgccgcgct
     7681 gtcgcaggtt acgctggtgg tcgaggccgc cttggaatcc ggttcgctga ttaccgccgg
     7741 cctggcggca gaaatggggc gcgaagtgat ggcggtaccc ggttcgatag acaaccccca
     7801 cagcaaaggc tgccacaaac tgattaaaga cggagcgaaa ctgacggaat gtttggacga
     7861 catcctgaac gaatgcccgg ggctattgca aaatacgggt gcttcgtcat attctataaa
     7921 taaggatacg cccgacacgg gccgccgcgc cgttcagacg gcatacgccc cgccgcctgc
     7981 tgcaaaaatg ccgtctgaag gggcggcagg cggcacagcc gtcggcggca tactggataa
     8041 aatgggtttc gacccggttc atcccgacgt gcttgccgga cagttggcta tgcctgccgc
     8101 agatttgtat gccgcactgt tggaattgga attggacggc agcgttgccg caatgcccgg
     8161 cggcagatac cagcgtatcc gaacttgaac gcactttata ttaaggaaca cgaatgaccg
     8221 aagtcatcgc ctacctcatc gaacatttcc aagatttcga tacctgcccg ccgcccgaag
     8281 acttgggtat gctgcttgaa gaagcgggtt tcgatacgat ggaaatcggc aacaccctga
     8341 tgatgatgga agtattgctc aacagctccg aattttccgc cgaacccgcc ggcagcggcg
     8401 cattgcgcgt gtacagcaaa gaagaaaccg acaacctgcc gcaggaagtg atggggctga
     8461 tgcagtatct gattgaagaa aaagccgtca gctgcgaaca gcgggaaatc atcatccacg
     8521 cgctcatgca catccccggc gacgaaatta ccgtagatac cgccaaagtg ctgaccctgc
     8581 tgcttttatg ggcaaacaag agcgagctgc ccgtgttggt cggcgacgag ctgatgagcg
     8641 cgcttttact cgacaacaaa cccacgatga actgaagcgg cttcagacgg cccgcccgag
     8701 gccgtctgaa acgccggcat caaaaccacc atccagagaa cgacaaatgg cgaaaaacct
     8761 attaatcgtc gaatccccgt ccaaagccaa aaccctgaaa aaatatttgg gcggcgattt
     8821 tgaaatcctt gcatcctacg gacacgtccg cgacctcgtc cccaaaagcg gcgcggtcga
     8881 tcccgacaac ggctttgcga tgaaatacca actcatcagc cgcaacggca aacatgtcga
     8941 tgcgattgtt gccgctgcca aagaagccga aaacatctac ctcgcaaccg acccggacag
     9001 ggaaggcgaa gccatttcct ggcatctttt ggaaatcctc aaatccaaac gcggcctgaa
     9061 aaacatcaag ccgcagcgcg tcgtgttcca cgaaatcacc aaaaacgccg tgctcgatgc
     9121 ggttgcccat cctcgcgaaa tcgaaatgga tttggtcgat gcgcaacaag cccgtcgcgc
     9181 tctggactat ctggtcggtt tcaacctctc gccgttgctg tggaaaaaaa tccgacgcgg
     9241 tttgagcgcg ggccgcgtgc aaagccctgc tttgcgcctg atttgcgaac gcgaaaacga
     9301 aatccgcgcg tttgaagcgc aggaatattg gacggtacat ctagacagcc acaaaggccg
     9361 cagcaagttc accgccaaac tcgcccaata caacggcgcg aaactcgaac aattcgacct
     9421 gccggacgaa gccgctcaag ccgacgtgtt gaaagaactc gaaggcaaag aggctgtcgt
     9481 tactgccatt gaaaagaaaa agcgcagccg caaccccgcc gcgccgttca ccacatccac
     9541 catgcagcag gatgccgtgc gcaaactcgg cttcaccacc gaccgcacca tgcgtaccgc
     9601 ccagcagctt tacgaaggta tagacgtagg gcagggcgcc atcggtctga ttacctatat
     9661 gcgtaccgac agcgtgaatt tggctgacga agcgttaacc gaaatccgcc attacattga
     9721 aaacaaaatc ggcaaagaat atctgccgag tgccgccaaa caatacaaaa ccaaatccaa
     9781 aaacgcccaa gaagcccatg aagcgatccg cccgacttcc gtgtaccgca cgcccgaaag
     9841 cgtcaaaccc ttcctgagtg cagaccagtt caaactctat caaatgattt ggcagcgtac
     9901 cgttgcctgt cagatgacgc ccgccaaatt cgaccaaacc accgtcgata ttaccgtcgg
     9961 caaaggcgtg ttccgagtaa ccggacaagt gcaaaccttc gcaggcttcc tcagcgttta
    10021 cgaagaaagc agcgacgatg aagagagcga agacggcaaa aaactgcccg aaatgagcga
    10081 aggcgacaaa ttgccggtcg acaaactcta cggcgaacaa cacttcacca ccccgccgcc
    10141 gcgctacaac gaagccacac tggttaaagc ccttgaagaa tacggcatcg gccgcccctc
    10201 gacctacgcc agcatcatct ccacgctcaa agaccgcgaa tacgttaccc ttgagcaaaa
    10261 acgcttcatg cccaccgaca caggcgacat cgtcaataaa ttcctgaccg aacacttcgc
    10321 ccaatacgtc gattaccatt tcaccgccaa actcgaagac cagcttgacg aaatcgccga
    10381 cggcaaacgc cgctggattc ccgtgatgga caaattctgg aaaccgttca tcaaacaagt
    10441 ggaagaaaaa gagggcatcg aacgcgccaa atttaccacg caggaactta acgaaacctg
    10501 cccgaaatgc ggcgaacaca aactgcaaat caagttcggc aaaatgggcc gtttcgttgc
    10561 gtgtgccggt tatcccgagt gcagttacac ccgcaacgtc aacgaaaccg ccgaagaagc
    10621 cgccgagcgc atcgccaaag ccgaggctga acaagccgaa ctcgacggac gcgaatgccc
    10681 caaatgcggc ggtcggttag cgtataaata cagccgtacc ggcagcaaat tcatcggctg
    10741 cgccaactac cccaaatgca aacacgtcga gccgctggaa aaaccgaaag acaccggcgt
    10801 ccaatgcccg caatgcaaaa aaggcaacct cgtcgagcgc aaatcccgct acggcaaact
    10861 gttttacagt tgcagcacct atcccgactg caactacgcc acttggaacc cgcccgtcgc
    10921 tgaagaatgc ccgaactgcc attggccggt cttgaccatc aaaaccacca aacgccgggg
    10981 cgtggaaaaa gtctgcccgc aaaaagaatg cggctggaaa gaacaaatcg aaccgcctgc
    11041 accgcaagag tgaagcggtt gggattaaga tgaaagaaaa tgccgtctga aaggggtttc
    11101 agacggcatt tgtaaattag aaggggctgt cccagatggc tggggaaatt taaattaagt
    11161 cagaattatc cctatgagaa aagccgtcca agccggtaca aacaaaagaa acccatcgga
    11221 ctgtttgccg caggcgtaac tgcaagaacg gcagcagggt tggcagcagt taatcaaaac
    11281 acggcagcct gttattttct atggcgaaat agtgtttggc acatcatcgg gaaaacttcc
    11341 tttacacgca tttggacgaa atctgcgaaa ttatggaggc atacgacata tcgtttacga
    11401 ttacttatcc gtcaaaacag tccgcatttg gaaatgtatg acggcgaagc aggggcgggt
    11461 gaaagttatt tccgtaaagg cagacgcggc cgcagtgccg ccggcaaagc cgccgtattc
    11521 gggcttttga agcgcaacgg caaggtttgt acggttactg tcggacactc gaaccgctat
    11581 tttattgcct attatccgcg gacgggtgaa acccggcagc attgtttata cggattgttc
    11641 gtagttacga tgtatcagat tgtaagcgga tttggccgtt tccgtatcaa tcgcggcaca
    11701 cattttgccg aacggcaaaa ccatatcaac gcaattggga acttttggaa tcgggcaaac
    11761 gtcatttgcg caagtttgac ggcattccca aagagcattt cgggctgtat ttgaaggagt
    11821 gcggacggcg ttttgacaac agtggggtaa aagttcgaat ttccatttta aaacaattgg
    11881 taaagcagga tttatcccgg ttggccggga ttttaaaaaa taaatacatt ctttaacaaa
    11941 acaaatcata tcccggcaag acaaatctga taaaatgctt ggcgtttatt aacaatcttt
    12001 ttaataattt aatcttagat attcggagtt gatatgcata cggccgacaa aa
//
LOCUS       DAWXHA010000071        11700 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.071, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000071 DAWXHA010000000
VERSION     DAWXHA010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11700
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.071"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            320..1624
                     /locus_tag="AABD07_001454"
     CDS             320..1624
                     /locus_tag="AABD07_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HFB2355956.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAARMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFIMA
                     AYSGLMSWAILKAVGKICGGLRVGKDVEREGLDLNIHGEHVE"
     gene            complement(1718..3013)
                     /locus_tag="AABD07_001455"
     CDS             complement(1718..3013)
                     /locus_tag="AABD07_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HFB2355957.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKAETCIIGGGLSG
                     LCTALPLAEHGHEAVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGVASAAAEAGAQIFEQSPMTRIEP
                     YQNGWLVYTPEGSVECKNVVYAVNTYVGLNPIFRPLERKAIAVSTFIIATEPLGARTK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     ADVRIEYSWGGECDITANLVPHFGRLTSNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFEQLCQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(3140..4027)
                     /locus_tag="AABD07_001456"
     CDS             complement(3140..4027)
                     /locus_tag="AABD07_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFB2355958.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     NREAAEAYRQEKLAAEKAN"
     gene            complement(4027..4992)
                     /locus_tag="AABD07_001457"
     CDS             complement(4027..4992)
                     /locus_tag="AABD07_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFB2355959.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISSA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIINNLLIKMGIIREPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDSRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(5008..6132)
                     /gene="potA"
                     /locus_tag="AABD07_001458"
     CDS             complement(5008..6132)
                     /gene="potA"
                     /locus_tag="AABD07_001458"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HFB2355960.1"
                     /translation="MTATTASSAKPYLQIQGLVKKFGDNYAVDNIDLDIYQNEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIDARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIENHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(6410..6679)
                     /gene="rpsO"
                     /locus_tag="AABD07_001459"
     CDS             complement(6410..6679)
                     /gene="rpsO"
                     /locus_tag="AABD07_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HFB2355961.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(6884..7819)
                     /gene="secF"
                     /locus_tag="AABD07_001460"
     CDS             complement(6884..7819)
                     /gene="secF"
                     /locus_tag="AABD07_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HFB2355962.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVARGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKMGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVNNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHTVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIAKEAKQKEEIVV"
     gene            complement(7823..9676)
                     /gene="secD"
                     /locus_tag="AABD07_001461"
     CDS             complement(7823..9676)
                     /gene="secD"
                     /locus_tag="AABD07_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HFB2355963.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAENSLTVPLQDAGDVQKALPQLLKLFPEATLNSEGSNIVLALSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPIIQQSGLDRIVVQLPGVQDTAKAKDIIGRTAT
                     LEVRMVEDDPAKLREALEGNVPSGYELLSSGGEHPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(9887..10153)
                     /gene="yajC"
                     /locus_tag="AABD07_001462"
     CDS             complement(9887..10153)
                     /gene="yajC"
                     /locus_tag="AABD07_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HFB2355964.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKAGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            10284..11402
                     /locus_tag="AABD07_001463"
     CDS             10284..11402
                     /locus_tag="AABD07_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HFB2355965.1"
                     /translation="MPLTRLFLKLYALLRLFLGKNAQTAWIFHPACTGHDPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTVEAEEISDTRLALVRSSKYLNRLESCLPEDGKICRL
                     DDDTVISKNSLSAARFSAGSAVQAVDMVMKRKAWHAFCAARPPEHHAKSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NGMPDGGNMVHLPLPSGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASSCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLNPTKKRFAKPKTGQVRQPTQSDRYDINAV"
     gene            11546..>11700
                     /locus_tag="AABD07_001464"
     CDS             11546..>11700
                     /locus_tag="AABD07_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFB2355966.1"
                     /translation="MSTFFRQTAQAMTAKHIGRFPLSELDQVIDWQPIEQYLNRQKTR
                     YLRDRRGR"
BASE COUNT         2900 a         3103 c         2983 g         2714 t
ORIGIN      
        1 attaatttta taaaataaaa atattgtcaa caatcttttg acttatcgcc caaacctctg
       61 tatattttcc tacagtaaat tgttgacaat ccatacgccc gcatatgcgc cgcctaagga
      121 taaatcctcc cgccggacaa cgggggcaag ggatgggatg cgatatttcc atattcaaac
      181 aagggatttg tttcacgcac agggcggcac atcggcaaaa tccccgcgcc ggtccggcag
      241 ggcttgcgcc catcccggac aagccccgac cccgcctttc cgaaagacgg gcccaaccat
      301 taaggaaact ttaatcaaaa tgaaaaaaca catatgggcg gcatctttgc tgccggcatc
      361 cctatcggca gaacctttaa actggtggaa accttattcc gccgtcaatt cgggcgatac
      421 cgcctgggtg atgactgcgg ctgccttggt actgttgatg acgcttcccg ggctggcttt
      481 attctacggc ggtatggtgc ggaaaaaaaa cctgctctcg acgatgatgc acagcttttc
      541 catcgcgaca ttggtgggca tcctttgggt cgccgtcggc tattctttgg cgttcacgcc
      601 gggaaatgcc tttatcggcg gtttggggcg cgtattttta agcgggatgc agatagacgc
      661 tgccgcacgg atgctgaccg tgtcgcccaa tgcgccgact gttcccgaac cggtatttat
      721 gttttttcag atgacgtttg ccattatttc gactgccatt attaccggcg cgtttgccga
      781 acgaatgaaa tattcggcaa tgatgctgtt ttcgggcata tggtttttat tggtttatgt
      841 gccgggcgcg cattgggtgt ggggcggcgg ctttatgagc aagggcggcg tattggatta
      901 tgccggcggt acggtggtgc acatcaatgc cggtatcgcg ggactcgtcg ccgccttggt
      961 tttgggcagg cgcataggct acgggcgcga ggcgatgcct ccgcacaata tggcgatgac
     1021 gctgattggc gcggcaatgt tgtggttcgg ctggttcggc tttaacgctg gttcggcgct
     1081 tgcggcagac gcggcggcgg ggatggcgat ggcggtaacg caggtgtcgg ccgtattcgg
     1141 cgcggcaggc tggcttgcct gcgagaaaat agcgggacac aaaccttctg ctttggggct
     1201 ggcttccggc gcagtttccg ggctggtcgg catcacccct gccgccggct ttaccggtcc
     1261 gtcgggcgcg gccgccatcg gtatattgac tgccgccgcg tgctttgtgt ccgtcaccgt
     1321 cgtcaaacac aaattgcgtt acgatgattc tttggacgct ttcggcatac acggattcgg
     1381 cgggctggta ggcggaatat tgaccggcat ctttttcgac aaccgcattt tcggtgggga
     1441 tgcggcagtt tggcagcagt tgtggataca ggtaaaagac gggttcatta tggcggcata
     1501 cagcgggctg atgagttggg cgattttgaa ggctgtgggg aaaatctgcg gcggtctgcg
     1561 cgtcggcaag gatgtcgaac gcgaaggttt ggatctgaat atccacggcg aacacgtgga
     1621 ataaggacgg ctatgccgtc tgaagcctga aaatcgggtt tcagacggca tttttcacgt
     1681 ttgccgccga tggggataaa catactgcct gcgacgctta acggctgtct ttccactgat
     1741 aatatttcga gccgaggaaa gaaccgagtt tgcgcaaaaa cggttgcagg ataatattcg
     1801 gctggcacaa ctgttcaaac ggtttcagac ggcattcgtc ccctaaaatt gcttcggcaa
     1861 ccgccaggcc tgcaatgccc gttatcgcca tcccgtgccc ggaataacct tgcgtataaa
     1921 aaacattcga ggtcaaacgt ccgaaatgcg ggacaaggtt ggcggtaata tcgcactccc
     1981 cgccccacga atattcgatt ctaacatcgg caagctgcgg aaaaacttta agcatatctt
     2041 ggcggacaag ctcggtcata cgcgcaggat tgtcgataaa ttcgttatcc ttaccgccga
     2101 aaagcagcct gccgtccgcg ctgaggcggt aataatccaa aatatggcgg ttgtcgcata
     2161 ctgccatatt gttgcggata agcccttttg tgcgcgcgcc caagggttcg gtggcaataa
     2221 taaaggtgct gacggcaatc gccttgcgtt ccaaaggccg gaatatcggg ttcaaaccga
     2281 cataagtatt gacggcatag accacatttt tacactcgac gctgccttcg ggcgtgtaaa
     2341 ccagccaacc gttttgatac ggttcgatgc gcgtcatcgg ggattgctcg aaaatctgcg
     2401 cgccggcttc ggcagcggcg ctggcaacac ccaacgtgta attgagcgga tgaagatgcc
     2461 cggacaaggg atcgaactgt gcgccttggt acatatcgct gtcaagctgc tgtttcaact
     2521 cggctttatc ccaaagttga taatgactcg caccgtaatg ccgttgggcg tgttcatgcc
     2581 actgctgcaa ctcttcccaa tgctgcggac ggacggcaac cgtggcataa ccgcgctgcc
     2641 aatcgcaatc gatggcatgt ttgcggacgc gttcgtccac cagttcgacc gcctgcaaag
     2701 actgttgcca aaaccattgc gcctgctcca agccgacctg tttttcaatt tcccccatac
     2761 cgcaggcgta gtcgctgata acctgcccgc cactcctgcc ggacgcgccg aagccgatac
     2821 gtgcggcttc caaaacgacg gcttcatgtc cgtgttccgc cagcggcaat gcggtacaca
     2881 aaccgctcaa accgccgccg ataatgcagg tttcggcttt cagacggcat tggagtttcg
     2941 gataaacagt atgcggatta accgaactaa aataataaga aggcagatat tcttgaaaat
     3001 cagggcgaat cattgtgttt gctttatcgg gtatattttc ggacggaatg atacaggctg
     3061 tcgggccata tcgtccaaac agaaaatcgg ttgaaaaaaa acaggctgac ccagtcatgc
     3121 ggtcagcctg ccttattaat taatttgctt tctcggcagc caatttttct tggcggtagg
     3181 cttctgccgc ttctcggttg cgcttggttg cctgcctcat catccaataa ttgacgatga
     3241 tgaccaatgt tccgatgatg ccgatcagga tggttgccaa gacattcatc tgaggatcga
     3301 gacccaactt gatcttggag aaaataacct gcggcaatgt ggatgaaccg gggccggaga
     3361 ggaatgaggt aattaccaaa tcatccaaag acaaggtaat gccgagtagg aagcctgaag
     3421 caatggcagg ggcaatcaaa ggcaaagtga tgacaaaaaa gattttcagc ggacgcgcgc
     3481 ccaagtccat tgcggcttct tcgagcgact ggtcaagctc gaccagccgc gaacggatga
     3541 caacggtaat gtatgccatg cacagcgtcg tatgtccgag gaagatggtg aaaaagccgc
     3601 gatcgaagta gagatgttgc aaccattcgc tgccctgcaa aaatatctgc acctgaataa
     3661 tcagcagcag catagacaga ccggtaatca cgtcgggcat gaccatgggc gcggaaatca
     3721 taccggcaaa cagcgtgctg ccgcgaaagc gtttgatacg cgccatcgca tagcccgcca
     3781 gcgtgcccaa aacgacggcg gcaagcgaag acacaacggc aatccgcagc gacagccaag
     3841 cggcttccaa aatggtgtcg ttttccagca atgcgccgta ccacttggtc gaaaagccgc
     3901 cccaaacggt aacaagtttg gattcgttga acgaatagat gaccaaaaca accagcggga
     3961 tatacagaaa cgccagcgat agtgccaaca tcagtttcaa gaaccaagat aatttggatt
     4021 tctgcattat ttggctcctt cttccaattc gcggttttca tagtgctgga acagggcaat
     4081 cggtacaacc agtagcgcga ccatcacgac ggcgacggca gaagccaacg gccagttgtt
     4141 ttgatcaaag aatgcctgcc acaatacttt accgatcatc aggttttccg aaccgccgac
     4201 cagctcggga atgacgaact caccgacagc ggggacgaaa accagcatcg aacctgcaat
     4261 aatgccggtt ttcgacaaag gcagggtaat cgtcaagaac gatttgaccg gtcccgcgcc
     4321 caagtcggaa gccgcttcga gcaggcggct gtccagtttc accagctgcg tgtaaagcgg
     4381 cagaatcata aacggcagat aggcataaac cattaccaaa tttaacgaaa acgcattata
     4441 gaacaaatct aatggttctc tgataatacc catcttaatc aataagttgt ttatgatgcc
     4501 gttatgcccg agcaaaccca tccacgcata gacacgcagc aggaacgatg tccaaaaagg
     4561 taacatgatg gcaagcagca aaccattgcg gacggaagga ttggcacggg aaatcgcata
     4621 ggcggtcggg taaccgacca acaggcaaat caccgtcgtc gtcagcgcag tcttaattga
     4681 agaccaataa gtcatcagat agatattact gttttcactg tcgccgaagg ggttaagggt
     4741 atgccaaaaa ttttggaaaa tatcggcata gttttgatag ctgacggcga tgttcaggcg
     4801 acccaagtcc tcatctatcg tcgttaaagg agtaaacggt ggaatggcga tttcttgttc
     4861 ggcagagctg attttcagca cgatggcgaa cggaatcaga aacagcacca aaagccaaat
     4921 atacggtacg gcaatcaccg cacgctgccc cggacggcgg aacagtttgt ttttcagttt
     4981 attaaggttc atctcactcc ccttaaatca acggaacaac ggagtcggtt ggttttccgg
     5041 ccagctgata tagacggttt catcccaagt cggcggcgtg atgttacgca cataccagta
     5101 aggtgcagga acttggcttt tgacgacgcg cccgttggcg agtttgatat ggtatatggc
     5161 gaagctgccc aaataggcaa tttcttttac cgtgcctttc gcccagttgt agtcgcccaa
     5221 atattcgggt ttttctttat ataaatcaat atcctctggt cgaatactaa cccaaagatc
     5281 ctgctcgctc gggccaccca aaccatggtc gatacggacg tggttttcca aaccttcgca
     5341 ttcgataacg gcatagtcgg catgattttc aatcaccaca ccgtcaaaga tgttggtttc
     5401 gccgataaac tcggcagtga agcggctgtt gggatagtcg tacacgtcgc tgggcgtgcc
     5461 gacctgctgc aactgaccgt cggacataat ggcgatgcgg gtcgccatcg tcatcgcctc
     5521 ttcttggtcg tgcgtaacca taatgcaggt tacgccgact tgttccagcg tattgaccaa
     5581 ctcgagctgg gtttgctggc gcaatttctt atccaacgcc cccaaaggtt cgtcaagcaa
     5641 caggattttc ggacgttttg ccaaactgcg cgccaaggcg atacgttgct gctgaccacc
     5701 ggacaattgg tgcggtttgc gtttggcaaa tttggtcatc tgaaccagac gcagcatttc
     5761 ttcgacgcgc gcatcgattt cgcctttagg cattttgtcc tgtttcagac cgaaggcaat
     5821 gttttgctcc accgtcatat gcggaaaaag cgcgtaactt tggaacatca tattgatggg
     5881 gcggtcatag ggtgcaagtt tggtaatatc ttgaccatca aggatgattt ttccctgatt
     5941 gggactttcc atacccgcca gcatacgcag cagcgtagat tttccgctgc cggaactgcc
     6001 caaaagggcg aaaatttcgt tttgataaat gtccaagtcg atgttatcga cagcgtaatt
     6061 gtcaccaaac tttttcacca aaccttggat ttgcagataa ggtttggctg aagacgctgt
     6121 ggttgcggtc ataatggcaa tactccaata aaaagacgag taccggcaaa acggattttc
     6181 gaatgggtga taaaaagctg tttgattgct ggcgggagtc gcaacgtctg atgccgtctg
     6241 aaactcttgt gaagcgcacg ggcagcatga aataaaaagg ggttctaaag aaccccgcat
     6301 tatattagtt tataaggttt ttagggtaat aaatatgggt ttgagcttgt cggaaagcaa
     6361 cagaaaagaa aacaccgccc atttttctgg gcggtgtcgg aaagcgcaat tatttacgca
     6421 gacccaagcg ggtaatcaac gcgcgatacg tatcgggctg ggtacggcgc aaataggcca
     6481 acaggcggcg gcgttggctg accattttca acaggccgcg acggctgtgg tggtctttgg
     6541 ggttggcttt gaagtggggg gtcagatcgt tgatgcggaa agtcaacagg gcaacttgta
     6601 cttcagaaga gccggtgtcg ccttctttac gttggaaatc tttaacgatt tgtgcttttt
     6661 gttctacggt cagtgccata atggaaaaac tccgaaaaat aaaaagaacc ccaaatggga
     6721 ttcggacaag tttgccaagc ctcgacaacg gcaaactccc tattcctgaa acaggaacag
     6781 cgcattatca cacaattttt gctgttctgc acgatatttt gcgatgtcgg cgaaatgccg
     6841 tctgaaaacg gagacatctt ccggtttcag acggcatttg acatcagacc acaatttctt
     6901 ccttctgttt cgcttccttg gcgatattgt cgcggctcaa accgaacatc agcaagagcg
     6961 ggctggcaac caatacggaa gagtagatgc cgaacacgat accgatggtc agtgccatag
     7021 aaaagccgtg caaggctgca ccgccgaaca ccagcataga aacaaccatc gcctcggtcg
     7081 aaccgtgggt aatgatggtg cggctcatcg ttgcggtaat cgcgttgtca atgacttccg
     7141 gcacggtatg tccgcgcatc gccggcttgc ggaaattttc acggatacgg tcgaagacga
     7201 cgacggattc gttcacagaa tagcccaata cggcaaggat acctgccaag acggtcagcg
     7261 aaaattccca ttggaagaag gcaaagcagc cgagaataat cacgatgtcg tgcatattgg
     7321 cgataatggc agatacggca aaacgccatt cgaaacgcat cgacaggtaa ataatgatgc
     7381 cgataacgac aaaacctaaa gccatcaatc cattatttac caattcctca ccgacttgcg
     7441 ggccgataaa ttcgacttgg cgcaaagtaa cgtcgggact gtcttttttc agcaaatcca
     7501 taacctgatt ggacaactgt gcggaagtaa caccttcttt gttcggcagg cggatcatga
     7561 tgtgtttgtt cgtacccaat gcctgaacct gtacatcacc cattttcagc gtatcgaggc
     7621 gttcgcgcat cttattgaca tccgcaccct gctgatattg gacttccatt accgtaccgc
     7681 cggtaaattc gacagagaaa ttcaggcctc tggcaaccaa aaagaatacg gcggcaataa
     7741 aggtaaccaa cgaaatgaag gttgtcagtt tgccgtagct cataaacgga atatcgcgtt
     7801 tgattttaaa gagttccata gcttactcct tacctgccgc agtttcggct tcaggtttcc
     7861 ataccgcacc gatggaaata ttctgcaatt tgcggcggcg gccgtaccac agattgacca
     7921 acgcacggaa tacgacgacg gacgaataca tcgaagtcag aatacccaag cagtgtacga
     7981 cggcaaaacc tcttaccggt ccggaaccga ataccaaaag cgcgataccg gcaatcagcg
     8041 aagtcaggtt cgaatcaaca atggtcgccc atgcgtgttg gaaaccgaga ttgattgcct
     8101 gctgcggcgg cacgccggca cgcaattcct ctcggatacg ttcgttaatc aagacgttgg
     8161 agtcgattgc catacccaaa gtcaacgcca gcgcggccat acccggtaac gtcaacgttg
     8221 cctgcatggc agacaaaata ccgattagaa acagtatgtt ggcactcaat gcaatagtag
     8281 aaaagaaacc catcaggcgg taataaacca ccatgaatgc agcaacgatg gcaaaacccc
     8341 ataaagtcga atggaagcct ttttcgatgt tctccttacc caaagacgga ccgatggtac
     8401 gttcttcgac aatctgcatc ggtgcggcaa gagaaccggc acgcaacagc aaagacgtat
     8461 cgttggcttc ggctgtcgtc atgcttccgg aaatttccac gcgtccgccg gtaatggcag
     8521 tacggataac cggtgcggtt acaacctcgg attttccttg gtcgatcaaa accatcgcca
     8581 tgcgtttgcc gacatttgcg gcagtcagtt cgccgaaaat gctgccgccc gcgctgtcca
     8641 agctcagact gacggcaggt gcgcccattt ggtcgaaact cggttgcgca tcgttgatgt
     8701 tgtcgccggt cagctcgacc tgtttgctga tcagcagagt ttcgggatgc tccccgccgc
     8761 ttgaaagcag ctcataaccg ctcggcacgt tgccttccaa tgcctcgcgc aacttggcag
     8821 gatcgtcctc caccatgcgg acttccaaag tcgcggtacg gccgatgatg tcttttgcct
     8881 tggcagtatc ttgcacgccg ggaagctgta cgacaatgcg gtccaaacct gactgttgga
     8941 taatcggctc tgccacaccc aattcgttta cacggttatg cagtgtagtg atgttttgct
     9001 tcaccgcatc tgatcgtact ttattcaccg cctcttccga aagcgccaat acaatattgc
     9061 tgccttctga atttaacgtt gcctcaggaa acagcttgag taactgaggc agtgcctttt
     9121 gcacatcgcc ggcatcctgc aaagggacgg tcaggctgtt ttcagcctga cgcaccgtgc
     9181 cgctgcggat tttttcacgg cgcagttcgc ggcggatgtc gcccgaataa cgctcaaacg
     9241 ttttctgcat cgcggctttc atatcgacct gcatggtgaa atgcacgccg ccgcgcaggt
     9301 ccaaacccaa aaacatcgga ttggctttga ttttcgccat ccattcgggg ctgtccgcca
     9361 acaggttgag cgcggtaata tacccttcgc ccaaagtgtt ttcgataacg tcgcgcgctt
     9421 taagctgcgt ttctgtgtct ttgaaacgca ctttcagtga attatccaca acaaacatcc
     9481 cgtcggtctg aatgcccgcg tttttcagcg cagcatccac tttggattga gtctgttcgt
     9541 tgatgatgat ggcttgtcgg ttggtcgata cctgcacggc gggcgtttcg ccgaataggt
     9601 tgggcagcga atacactgcg gcaaccgcaa tcgtgaacac aatcagcaga tatttccata
     9661 aaggataacg gttcatcatt gttccttaat ggttggaacc ccaccctttc ggtggtgtcg
     9721 gaatcgggct atttcagaag aggcaaaacc cctccctgcc aggcaagacc gaaaggcagc
     9781 atcttgaata tgccgccctg cgtgtcggaa catggtcaag ccttcggttg gaattcaaaa
     9841 caaagtgccg cattcgggct ttcccgatgc ggcttgtcgg cacaaatcaa tcgacttttg
     9901 cggcaatcgc attgcgttcc acttcgacct cgatttttgt accctgtccg atatccacgg
     9961 taaaaaactg ttcgccgact ctggttacct tacccttgaa acctgccgcc aagaccactt
    10021 tgtcgccggc tttcaaggcg gcaagcattg cctgatgcgc tttgaatttc ttttgttggg
    10081 ggcgcatgat caggaagtag aacaccacca taatcaacac caaaggagca aattgtgcaa
    10141 cagcttgatt cataatttat ccgttctttc taaatatgat tgaaaatcga gcggggtata
    10201 taatagcata agaccgtaaa caatatatcg ggtttgccgc ccatacccaa ccgtatgccg
    10261 tctgcacccc ctttcccgaa cccatgccgc tgacccgcct gttcctgaaa ctctacgccc
    10321 tgttgcgcct ttttttgggc aaaaacgccc agaccgcctg gattttccac cccgcctgca
    10381 ccgggcacga ccccggggca aaccatcccg attcgcccga ccgcatcctc tgcatcgagc
    10441 aggcattgcg ccgcgccggt atttggcagc acctccaaac cgtagaggcg gaagaaatca
    10501 gcgatacgcg ccttgcactt gtccgctcga gcaaatatct gaaccgtttg gaatcttgcc
    10561 tacccgaaga cggcaagatt tgccgtttgg acgacgacac cgttatcagc aaaaactccc
    10621 tgtccgccgc ccgtttttcc gccggttcgg cagttcaggc agtcgatatg gtcatgaaac
    10681 gcaaagcgtg gcacgccttt tgcgccgccc gcccgccgga gcatcacgcg aaaagcggca
    10741 aagccggcgg attctgcctg ctgaacaacg ttgccgccgg cgtcatgcat gccattgccg
    10801 aataccgcct gaaacgcatt gccgtcatcg atttcgatgt ccactacggc gacggtacgg
    10861 cagaaatatt caaagacgat ccgcgtatcc tgtttttcaa cctgtttgaa accgaccttt
    10921 tccccttccc cgaaaacaac ggtatgcccg acggcggcaa tatggtgcac ctgcccttgc
    10981 cgtcgggaac gggcagccgc acattccgcg aagccgtccg cagacagtgg ctgccccggc
    11041 ttgccgcatt caaacccgaa ctggtgctgc tgtcggcagg attcgacgca caccgtctgg
    11101 acgaatcggg caggctcaac ctgcacgagg cggattttgc ctggctgaca cacaaaatca
    11161 ttcagacggc atccagctgc cccggcaaaa tcgtatccgt actcgaaggc ggctacaccc
    11221 ttgaacctct ggcacaatct gctgccgagc atatccgcgt actggcgggg ctgggcaaat
    11281 ccgatgccgc aaccgcctat cagaaaacac tgaacccaac aaaaaaacgg tttgccaaac
    11341 cgaaaaccgg acaggtgcgc caacctaccc aatccgaccg ttacgatata aatgccgtct
    11401 gaagccgatt cggttttcag acggcatcat tatttgacct gacgcaaaca gaaagccttc
    11461 cgcgtgctta aacacatctc ttgagacctt tgcaaaaatc cccaaaatcc cctaaattcc
    11521 caccaaggca tttaggggat ttcccatgag caccttcttc cggcaaaccg cacaagccat
    11581 gactgccaaa cacatcggcc gcttcccgct atcggagttg gaccaggtga ttgattggca
    11641 gccgatcgaa caatacctga accgtcaaaa aacccgttac ctccgagacc gccgcggccg
//
LOCUS       DAWXHA010000072        11665 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.072, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000072 DAWXHA010000000
VERSION     DAWXHA010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11665
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.072"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            293..1147
                     /locus_tag="AABD07_001465"
     CDS             293..1147
                     /locus_tag="AABD07_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355967.1"
                     /translation="MSNGARWTVTNDSMLKELDLSEDAQVEFSDNNKFVKVSVSKLKG
                     DGGVFKMYGDIVKGESDKLITRKGSEGTHIIEYMDDAKAKTTGREYLKLVENKGNQED
                     NKASNKASYKLNVRCTEQGGWCFALGESGASKKVNISTDGKRDFYLYPDTLTPGASSS
                     VLFGEALYQLNAVSDETLVQRMGEIHADGTPQEDNNVWIKRVGGKFSGSRSDYRVGGY
                     GNRYWGFAGGFNRTGFGDKWIHYKGLMLRHLQSSYASEDYVGSGKILRQGGRCLFRLA
                     QPGKQGLL"
     gene            1237..1695
                     /locus_tag="AABD07_001466"
     CDS             1237..1695
                     /locus_tag="AABD07_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFB2355968.1"
                     /translation="MPICFPPKPVGGWKNKTAAKTYRWQPEVQLSYWFTRGYGFPLSN
                     GLSAETDNFRSLMGRFGFRAGVDGLDGGRLNIYGKLMYKREFIGTIRHRFNGSAVEEF
                     KHRGGWLEYGLGVVRRNAGNGRQLYFEAQRSSMHTMRQNWQVNMGVRSMF"
     gene            complement(2178..3590)
                     /gene="trkA"
                     /locus_tag="AABD07_001467"
     CDS             complement(2178..3590)
                     /gene="trkA"
                     /locus_tag="AABD07_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HFB2355969.1"
                     /translation="MKILILGNGQVGSTVAQNLAAITNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(3688..5211)
                     /locus_tag="AABD07_001468"
     CDS             complement(3688..5211)
                     /locus_tag="AABD07_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HFB2355970.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVNMLDKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLKQTGLLGMIGKSERGAATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAVYEFEVKDMPVTVAVDSKGESIHATAPRKWQAKIGIIPVES"
     gene            complement(5518..6324)
                     /locus_tag="AABD07_001469"
     CDS             complement(5518..6324)
                     /locus_tag="AABD07_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HFB2355971.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK"
     gene            complement(6376..6627)
                     /locus_tag="AABD07_001470"
     CDS             complement(6376..6627)
                     /locus_tag="AABD07_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355972.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPADTAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            6729..7499
                     /locus_tag="AABD07_001471"
     CDS             6729..7499
                     /locus_tag="AABD07_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355973.1"
                     /translation="MDTNNQDKEPNWEKRLENLRQTRRMNTAPAYVPLTKPSEVGKEE
                     PIPKLDDANRDRVLKAYLKKWQEEHNSAVADCGEEVETDPMIVLQENWLNAQASLQMP
                     VSEKHIESRRRIRFDAKKDSAEFETAQIEGGENADAAESGTAADGVAENGEGGAEEAL
                     MPVQINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGMIRTAVQKQMALFT
                     YQLQQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            7645..8814
                     /gene="metZ"
                     /locus_tag="AABD07_001472"
     CDS             7645..8814
                     /gene="metZ"
                     /locus_tag="AABD07_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HFB2355974.1"
                     /translation="MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTIAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGGH
                     VVSSRSLFGTTVGFINNIVTKFGIGVSRVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALRIAQWLQE
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITNPWTTTHGRMQPEEKLAAGIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            8909..9115
                     /locus_tag="AABD07_001473"
     CDS             8909..9115
                     /locus_tag="AABD07_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HFB2355975.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAVLF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            9511..9735
                     /locus_tag="AABD07_001474"
     CDS             9511..9735
                     /locus_tag="AABD07_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355976.1"
                     /translation="MFIFYTVNPEHVYFPKAYIMKVFKDKGYESQCITTVSFYICNPT
                     LKQKTENEAYEYGRLFVKELMHKECNRESL"
     gene            10020..11051
                     /locus_tag="AABD07_001475"
     CDS             10020..11051
                     /locus_tag="AABD07_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor family protein"
                     /protein_id="HFB2355977.1"
                     /translation="MTKVTGKGLVSDTEFVVRYSELLEEILGFGITKKLPFKGKFFYQ
                     SCYQFGPDNVEYGKVHYGGQCETMLVELNGTGCMAALPGWENRLYEFLSKCVRPKITR
                     IDVAHDFFNGEYTPDQAMLDHDNGHYDVHNMRPKSECRGTAWRNEDGSGKTFYIGKRG
                     NSKFTRVYEKGRQLGDVDSPWVRFEGDIEIPLDVLLYSGSYLGGAYPICKEIFKTEAK
                     RMEVKVKNVNLIFDVKLFHARNQVGKMVNFLRDIGWDDSRIVDELVKGVEGYPKGLQP
                     EQYDCKNQTQKFQYIHEEQKAINALNIETLFDDLIEEREYAFPQDREWQHIKDIEYEE
                     RQISDFLNN"
     gene            11065..11376
                     /locus_tag="AABD07_001476"
     CDS             11065..11376
                     /locus_tag="AABD07_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355978.1"
                     /translation="MFETSQVTTYTATLLGAKKFKGEIDGNKIDSCTVLVASPMPSNG
                     NAVGFTSESMKFGDSHNFEKLKNLKFPCAVDLTVAMESTGKGLVQKLLDFQVKGAAPK
                     A"
     gene            11390..11593
                     /locus_tag="AABD07_001477"
     CDS             11390..11593
                     /locus_tag="AABD07_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355979.1"
                     /translation="MSRYQQKFIVQELENHEFIYPDSFGDIGFTSNIKSAGKYDSYED
                     AFSSALEEIGGEFVIFGFYEKED"
BASE COUNT         2883 a         2756 c         3273 g         2753 t
ORIGIN      
        1 aatgttaagc agaaacgatt gtctcaaaaa aagcaacttt ggataaatac aatcaagaat
       61 tggctgaact aggtgaaaat gaaaagaaaa aagaagaact agaaaaaaag taaaacagca
      121 agaaaacaaa attcagatca gaaaaaggca catagaacgt ctaaaagaag acatagaaaa
      181 ggttgcggta ctcgaagaag aaatcaaaag atctgaaaag ttcttcgatg aaaacggttg
      241 gcttaaagac agcattatcg acgacaaaac aaaaaacgcc gtcaacctca aaatgagcaa
      301 cggcgcgcgt tggacggtta ccaatgattc aatgctgaaa gagttggatt tgtcggaaga
      361 cgcgcaggtc gaatttagcg acaacaataa attcgtcaaa gtgtccgtga gcaagctcaa
      421 gggcgatggc ggcgtgttca aaatgtatgg cgacatcgtc aaaggagaat cggacaagct
      481 gattacccga aaaggcagcg aagggacgca catcatcgaa tatatggacg atgccaaggc
      541 aaaaacgacg ggaagggaat atctgaaact ggtcgaaaac aagggcaatc aagaagacaa
      601 taaagcatca aataaagcat catacaaatt gaatgtccgc tgtacggaac agggagggtg
      661 gtgttttgcc ttgggtgagt cgggtgcttc caaaaaggtc aatatttcca cagacggtaa
      721 gcgggacttc tacctctacc cggataccct gacgccgggc gcatcgagca gcgtcctttt
      781 cggcgaggcg ttgtatcagt tgaacgcggt ttccgatgaa acgctggtgc agcgtatggg
      841 cgaaatccac gccgacggaa cgccgcagga agacaacaac gtttggatca aacgcgtcgg
      901 cggaaaattc tccggcagcc gcagcgatta ccgcgtgggc ggttacggca accgctattg
      961 gggctttgcc ggcggcttca acaggacggg gttcggcgat aaatggattc attacaaagg
     1021 gctgatgctc cgccacctcc aatcgtccta cgcttccgaa gactacgtcg gcagcggcaa
     1081 aatcttacgg cagggcggca ggtgtttatt ccgcctggct caaccgggaa agcagggctt
     1141 attatgattt ggtcgccaac atcgcccgat ataacggcag ctacgggctg accaattacg
     1201 ccggcaaacg ggtcgaatcg gacgaggcgc gcctgaatgc ctatatgctt tccgccgaag
     1261 ccggtaggcg gatggaaaaa caagacggcg gcaaaaacct atcggtggca gccggaagtg
     1321 cagttgtctt actggtttac gcgcggctac ggctttccgc tgtcaaacgg gctgtctgcc
     1381 gagacggaca acttccgcag cctgatgggg cggttcggct ttcgggcggg cgtggacggt
     1441 ttggacggcg gcaggctgaa catctacggc aagctgatgt acaaacgcga gtttatcggc
     1501 acgatccgcc acaggttcaa cggctctgcc gtggaggaat tcaaacaccg gggcggctgg
     1561 ttggaatacg gcttgggcgt ggtgcgccgc aatgccggaa acggacggca gctttatttt
     1621 gaggcgcaaa ggtcttcgat gcacacgatg cgccagaatt ggcaggtcaa tatgggcgtg
     1681 cgcagtatgt tctgatgcgc ggatacgcct gaaaacaatc cggaacggtc agacgcgttc
     1741 cggattgttt ttttgtcggg gcggtttgct gccatatcaa aacaggcggg cgatgccgtc
     1801 tgaaacttcg tcattcccgc gaaagcggga atctagaacc tcaaactttc agataatctt
     1861 tgaatattgc tgttgctcaa tggtttggat tcccgcaacc tttcgtcatt cccgtgaaaa
     1921 cgggaatcta gaatctctaa agcttcagct aacctttgaa tattgccgct ttccaatggt
     1981 ctagattccc gcctgcacgg gaatgacgat ttggaaatta cccgaaaccc aaaaacaact
     2041 gaaaccgaac aggccggatt cccgctacgc gggaatgacg gggggcggat gccgtctgaa
     2101 gcggtgggct gaagcccact ctactattat ttttgcttcc ataccgcttg gcggcaatgt
     2161 gtccggaatg gagcggttta tccgaaaaag cccattttga cttggatgag tttctccagt
     2221 tcgttcagga tgcgccggcg cgagacgaaa aagatgatgt ggtcaccgtc ttggatgacg
     2281 gtttcggtat ggtgtcccat aatggtttcg ccggttccgg cgcggacgac ggcggcaatg
     2341 tggcagcctt cgggccattt gatgccgctg atgcgcctgc cgatgatggc ggaagttttt
     2401 ttgtcgccgt gcgcgacgac ttcgatggct tccgccgtgc cgcgccggat ggggtggacg
     2461 gcaacgatgt cgccgcgccg gatgtgggcg agtatcgagc cgatggtgat gaggtggggg
     2521 gagacgacga tgtcgatttt gttgccttcg agcaaatcga cgtagcttga gcggttgacg
     2581 atgccgatga cgcgcttcgc gccgaggttt ttcgccaaaa gggcggacat aatgttgctt
     2641 tcgtcgtcgt tggtcagggc gcagaatacg tcgatttcgt cgatgtattc gttgtcgagc
     2701 agggtttcgt cggttgccga accttgcagg acgagggtgt tgtcgaggtt ttcggctatc
     2761 cattcggcac ggcgcggccg gcattcgatg attttgacgt tgtatgcgtg ttcgagctgc
     2821 ttggcgaggc ggtagccgat gttgccgccg ccggcaatca tgatgcggcg ggtgctggtt
     2881 tctttggggc gcaattcggg tatgaccgcc ccgatgtttt cggcggcggc ggcaaacagg
     2941 atttcgtcgc cttcgatgat gacggtttgc ggcgcgggga cgatgaggcg gttgttgcgg
     3001 taaacggcgc agatttggca gtcggccccg tcgggcaaat cttgggcgat gtcggcaatg
     3061 ctgcgtccga caagcagccc gccgcgccgc gcctgtatga tgaccatccg cacgcggtcg
     3121 tctgcaaaac gtaaaacctg caatgcgccc gggcagtcta tcaggccggc aagctgttcg
     3181 gtaacgagct gttcggggct gatggtttcg gttatgccga atatggaaag gctgccgttt
     3241 tcgttgtttt cgagcttggg gctgaggtat tcgaggtatt cgctggaacg gacgcgcgcg
     3301 atgcggccgg ggatgttgaa caggtcggcg gcaactttgc aggcgacgat gttggtttcg
     3361 tcgctgcggg agagcgcgag cagcaagtcg gcatcttccg cgccggcgcg ttctaatgtg
     3421 aagggggatg cgccgttgcc gaaaacggtt tggacatcga ggcggctgcc tgtttcctgc
     3481 aatgcttttt cgtcgatgtc gataacggtt acgtcgttgt tggtgatggc ggcaaggttt
     3541 tgcgcgacgg tagaacctac ctgcccgttg cctaaaatga ggattttcac ggtatgggtc
     3601 gccgggtgat gaaatggtgg attgtaccgc aaccggcggc ggaaatgccg tctgaaggca
     3661 gattttgcgt tcagacggca ttgcgcttca agactcgacg gggatgatgc cgattttcgc
     3721 ctgccatttg cgcggggcgg tggcgtggat ggattcgcct ttgctgtcca cggcgacggt
     3781 tacgggcata tctttgactt caaattcgta aacggcttcc atacccaatt cggggaacgc
     3841 caagactttg gaagatttga tggcttttgc cacgaggtat gccgcgccgc cgactgccat
     3901 gaggtacacg gccttgttgt cggcgatggc ttcgcaggtg gccgcgccgc gctcggattt
     3961 gccgatcatg cccaagaggc cggtttgttt gagcatttgg cgggtaaatt tgtccatgcg
     4021 ggtggctgtg gtcggacctg cgggaccgac gacttcatcg ccgaccggat cgacggggcc
     4081 gacgtagtaa atcaggcggt tggtgaaatc gacgggcaac tcctcgcctt tgtcgagcat
     4141 attgacgagg cgtttgtgcg cggcatcgcg gccggtgagg attttgccgt tcaacagcaa
     4201 tacgtcgccg gttttccagc ttgccacttc ttctttggtc agcttatcga catcgacgcg
     4261 tttgccgttg tcggggctgt aagtcagatc gggccagtct tcgacgcgcg gcggcgtgag
     4321 ttcgacagga cctgagccgt ccaattcaaa ttcgacgtgg cgggtggcgg cacagttggg
     4381 aatcatggca atcggtttgg aggcggcatg ggtcgggtaa tcgaggattt tcacgtccaa
     4441 cacggtggtc agaccgccca agccttgcgc gccgatgccc agcgcgttga ccttttcaaa
     4501 gagttcgagg cgcagggctt cggtggtgga caattccgcg ccggacgcgg ctttttcctg
     4561 caattcttgg atgtcgatgt ggctcatcag ggattctttc gccatcaaca cggctttttc
     4621 gggcgtgccg ccgatgccga tgcccaagat gccgggagga caccagcccg cgcccatcgt
     4681 cgggatggtt ttcaataccc aatcgacgat gttgtcggaa gggttgagca tagcgagttt
     4741 ggatttgttt tcagagccgc cgccttttgc cgcgcaggtt acttcgactt taccgcccgg
     4801 cacgatgctc atgtggatga cggcgggggt gttgtctttg gtgttttggc gtttgccggc
     4861 cggatcggcg aggacggaag cgcgcagggt gttgccttcc caagtgtagg cgcggcgtac
     4921 gccttcgtta accatctctt ccacgctcat gtccgcatcc cattgcacat ccataccgac
     4981 tttgaggaag acggttgcga tacctgtgtc ttggcagatg gggcggttgt tttcggcaca
     5041 catacggctg ttgaccaaaa tctgcgtcat cgcgtctttg gcggcgggat tttcttcctt
     5101 ctgccacgcc ttataaagcg cgtcgatgta gtcttttgga tggtagtagc tgatgaattg
     5161 gaaggcatcg cagatacttt gaataaagtc ttcttgcttg ataacggtca tgattgtgtt
     5221 ccttttcaag gttgtggcgg taagtgtctg ctgctgtttt aaacaacctt tttgaaggct
     5281 gttttttatc aggttgaaat agtgccagcg tttgtacggt gaagacaata cataattcta
     5341 atctcttgat tatcaatttg ttttaataaa atactgtttt attcggattt tgatatttgt
     5401 aatctttgcc tgttgctttg cggtagggag aaatcagcag gcagttcatt gtggaccggt
     5461 tgatgaacaa tgccgtctga aagggcttca gacggcattt tgttcggacg ggcgggctta
     5521 tttcgcagcc tgtccgccct ctttggcaaa atatttggcg tagatcttgt cgtattcgcc
     5581 gctttcgcgt actttttcca acgcatcgtt cagcattttg acggttgctt cgtcgccttt
     5641 gcgtaccgcg atgccgtagt gttcggtggt gaagtcgggc agggtaacga agtccattcc
     5701 tttggccggg ttgtttttca cataattggc gatgaccgcg ctgtcgctga ccacggaatc
     5761 caagccgccg ttttccagtt ctttgataat cagggggacg ttttcaaagc gcgcgatttt
     5821 cggattgtcg ttgcccaaga gtttggaaac ggagaaatcg cccgtgtggc cggtaaccac
     5881 gccgactttg ttcatctttt tcaaatcttc ggaagaagat acttttttgc ctttcggaac
     5941 gaggacgact tgggtgattt caaaatacgg gtcgctgaaa tccatagact gtttgcggtc
     6001 gtcggtaatg gttacgcccg acatcacaac gtccgcatcg ccgttgttca aggcggggaa
     6061 aaggctgtcc cacggctggt gtttgaattc gattttaaaa ttgcccgcct tcgccatcgc
     6121 gttcatcaaa tccacgtcga aaccttcgac attgcctttc gagtctaaag attcaaaggg
     6181 ggcaaactcg gcgttggaag ccacgcggta cactttgccg gggttggcgg caggcgcggc
     6241 ggcatctttg ccctggccgc cgcaggcaga cagcgcgagt gcggaacagg caagggcggc
     6301 ggcaatccat tttttcatat tcatcaaaat tcctttcggt aatcaaaaag cctaaaaaat
     6361 cagtttaaca taaaattaac gttccttttc acggaaaaac gcataagtaa cgtcgtggaa
     6421 caaatccgta tgcgggctgt cctcatagct caattctgcc aaggcgtcct caaaagcaag
     6481 ctgaatcgac tcgaccgcga tttcggcggt gtctgcggga agggcgcgga ttaaggcttt
     6541 gaaggcggtg gacaggacgt ggttctgcat acgcagcacg tcgtttgcct cttccagata
     6601 ttccaaacgc tgttcgatgc tgcccatgat gtatcctcgc gaatctgtta aaatgcgcca
     6661 ttatatcaaa ctgcgctttg ggcgcgggtt tgcccgcctg caaagattaa gaaccggaag
     6721 ccgaaaaaat ggatacaaac aatcaggata aagagccgaa ttgggaaaaa cgcctggaaa
     6781 acctgcgtca gacgcgccgt atgaataccg cgcctgccta tgtgccgctg accaaacctt
     6841 ctgaagtcgg aaaggaagag cccataccga aattggacga tgcaaaccga gaccgtgtgt
     6901 taaaggcgta tctgaagaaa tggcaggaag aacacaacag cgccgttgcc gattgcggcg
     6961 aggaagtcga aaccgacccg atgatcgtcc ttcaggaaaa ctggctcaac gcgcaggctt
     7021 ccctgcaaat gccggtttcg gaaaaacaca tcgaatcgcg gcggagaatc cggttcgatg
     7081 ccaaaaaaga cagtgccgaa tttgaaaccg cacagattga gggcggggaa aacgccgatg
     7141 cggcagaatc cggtacggcg gcagacgggg ttgcggaaaa cggcgaaggc ggtgcggaag
     7201 aggcgttgat gcccgtccaa atcaatatcc tgaacccgaa agccgtcaac cggcgcgaag
     7261 tgttctgcct gtccgaacag gagctgaccg aacggttgat caaacgcctg cgcccgcatc
     7321 tgaccgatac cgtcaacggc atgatccgta cggcggtgca gaagcagatg gcgctcttta
     7381 cttatcagct ccagcaaatg ctgcacgagc aggcgggtgc ggtagtcgaa gacgtgttgg
     7441 aacacgatgt ccgtaaaatc ctcaacgaca tcaagtacga attaaaatac aaacgctgat
     7501 tgccatgccg tctgaaagcc gtgttcagac ggcattttcc tgcccgtccg acttgaaagc
     7561 ctcatggaac aggcgcaaaa tattaataaa ttaaacaacg ggtgcacgcc ccgttgccga
     7621 acggacaaaa ccgaggaatc accgatgagc aaaaaacttc atccgcaaac gctcgccata
     7681 cgcggcggca aagaacaaac cggataccgc gaacacaatc aggcattgtt cctgaccagc
     7741 agcttcatgt gggacaacgc ccaacacgct gccgatttgt tttcaaaaaa aatcaaaggc
     7801 ttcacttata cccgtaccgc caacccgacc atcgcggcct ttgaaaaacg catagccgct
     7861 ttggaaggcg cggaacgcgc ggtcgccact tcgaccggca tgtccgcgat tcaggcggcg
     7921 tttttcacct tcctgcaggc gggcggccat gtggtttcca gccgcagcct gttcggcacg
     7981 accgtcggct ttatcaataa catcgttacc aaattcggca tcggagtgag ccgcgtgtcg
     8041 ccgactgata taaatgaatg gaaagccgcc gtcaaagcca acaccaaact gctgtttttg
     8101 gaaacgccgt ccaacccctt gggcgaagtg gccgacttgg aagccttggc ggaattggcg
     8161 cacggcatcg gcgcgctctt ggtggtggac aacagcctgc tgtcgcccgt cggctcgcag
     8221 cctttgaaac acggcgcgga tatttccgtt tcctccgcca ccaaagccat agacggacac
     8281 gggcgcgtga tgggcggcgt gttggcgggt tcggaagaac tgatggcgca ggtcgccgtt
     8341 tactgcaact cttgcggttt ggcgatgtcg ccgtttaacg cgtggcagtt gttgagcggc
     8401 gtggaaaccc tgtcgctgcg tatggaaaaa cagtttgaca acgccttgag aatcgcgcaa
     8461 tggctgcaag agcagccgca ggttcaagca gtgtactaca ccggattgcc cgaccatccg
     8521 caggcggagc ttatccgcaa acagcaaaac ggcggcggca tcgtcatcgg ttttgaagtc
     8581 gccgaccaag cagccgcgtg gaaagtcgtg gacggcgtgg aactcttttc ccgtaccgcc
     8641 aacctcggcg acgtgcgctc gaccatcacc aatccgtgga caaccacgca cggcaggatg
     8701 cagcccgaag aaaaactcgc cgccggtatc cgccccggac tggtgcgcct gtcggtcggt
     8761 ttggaatatg ttggcgattt gattgacgat ttgaaacagg cactcgcgcg ctgattgcgt
     8821 gtttcagacg gcatcggcgg aaaaatgcgg cagatgccgt ctgaaaccct tattgcgtat
     8881 ggcatacaca tcaacaatag gaaaaaatat ggatgaagcg gtttttgccg attgggcgtt
     8941 gaaaatctgc ctgaccggtt tgattatttt tttgggtttt atcgtttgga atttgggcaa
     9001 ggagtccaaa gcgggcaaat tcggcatcgc cgttttgttt ttggttttgg gcttgggtgt
     9061 gttcggtttt gtgttcaaag agttattgat taagtttttg gtattgccca aataggtttg
     9121 ccgtctgtcg aaatgccgtc tgaaatcata aaaagtaatc tgcaccctaa aagtttgatt
     9181 taaccgccaa ctgattaagg tgcgggtttt tatgacaaaa taaaaatcat ctttccgcaa
     9241 tcattcccac ggatgcgaaa gcctgtcttt ttgaatcccg gataatttta catcgtcatt
     9301 cccgcgcagg cgggaatcta gtccgttcgg tttcagtcat ttacgataaa ttcctgttgc
     9361 ctttcatttc cggattccca ctttcgcggg aatgacggag gagcggataa attctcgcaa
     9421 tctaaaacct tatatattgc gctccataag gggcgcatat ttttaatcct tgtaaagccc
     9481 cttaactcta gtcagtgaag gggcttaatc atgtttattt tctatactgt caatcccgaa
     9541 cacgtatatt tccccaaagc atacatcatg aaagtgttca aggataaagg ctacgaatcc
     9601 caatgcatca caacagtttc tttttatatc tgcaatccga ctttgaagca aaagaccgaa
     9661 aacgaagcgt atgaatacgg cagattgttt gttaaagaac tgatgcataa ggaatgcaac
     9721 cgtgaaagcc tttgaagata aagccttggc ggtgtccgcg gacatggcgg acgcgttagc
     9781 ggacggcggg gctgcggcaa ccgccgtagg ctgcccccct aggctaatag gggggggagc
     9841 aaaataaaac cccaaatccg aagggtgcgg aaaaaacaga aaaccaagaa tttcaattcg
     9901 agtatttcag tcattttgta tcggacggca aaggcagatt tatagaaata ccgttaaggc
     9961 gtggcaggga tgacggagcg ttcatagacc aaatcacttt cacgatacat gaaaattcca
    10021 tgacgaaagt aaccggaaag ggattggtat cagatacgga attcgttgtc cggtatagcg
    10081 agctgcttga agaaatcttg ggattcggca ttaccaaaaa attaccgttt aaaggaaagt
    10141 ttttctatca aagctgttat caattcgggc ccgataacgt cgaatacgga aaggttcatt
    10201 acggcggcca atgtgaaacg atgttggttg aattgaacgg tacaggctgc atggctgctt
    10261 tacccggttg ggaaaaccga ttgtatgaat ttttaagtaa atgcgtccga cccaaaataa
    10321 cccgtatcga tgtcgcccat gattttttca acggagagta cacacccgat caggcaatgt
    10381 tagaccacga taacggacat tacgacgtac acaatatgcg gccaaaaagc gaatgtcgcg
    10441 gcacggcatg gcgcaatgaa gacggcagtg gaaaaacctt ttacatcggc aagcgcggaa
    10501 attcaaaatt tacccgtgtt tacgagaaag gcagacagct tggagatgtt gatagccctt
    10561 gggtcaggtt tgagggggat atagaaatac ccttggatgt cctactttat tcggggtcgt
    10621 atctaggcgg cgcatatccg atttgcaagg agatttttaa gacagaagcc aagcgcatgg
    10681 aagtaaaagt taaaaacgtt aatctgatat tcgacgttaa gctttttcat gcaaggaatc
    10741 aagtcggcaa gatggttaat ttcctccgcg atatagggtg ggacgatagc aggatagttg
    10801 atgagctggt gaaaggcgtt gaaggttatc caaaaggttt acagcctgag caatacgatt
    10861 gcaaaaacca aacgcagaaa ttccagtata tccacgaaga acagaaagcc attaacgcat
    10921 tgaacattga aacactgttt gatgatttga ttgaagagag agaatacgca tttcctcaag
    10981 acagggaatg gcaacacatc aaggatattg agtacgagga acgtcaaata tccgattttt
    11041 taaacaactg aaggaaattg aaaaatgttt gaaacaagcc aagtaaccac atataccgcc
    11101 actttgttgg gcgcaaaaaa attcaaaggc gaaatcgacg gtaacaaaat cgattcatgc
    11161 accgtcttgg tagccagccc catgccgtca aacggcaatg ccgtgggctt tacctcggaa
    11221 agcatgaagt ttggtgacag ccataatttt gaaaaattga aaaaccttaa attcccctgt
    11281 gcggttgatc taaccgttgc catggaatca acaggaaaag gcttagtgca gaaattgttg
    11341 gatttccaag taaagggcgc agcacctaaa gcctaagaaa ggctgaatca tgagcagata
    11401 ccaacagaaa tttatcgtac aagaattgga aaatcacgaa ttcatctatc ccgattcgtt
    11461 tggcgatatt ggatttacgt cgaacatcaa atcagccggt aaatatgaca gctatgaaga
    11521 cgcattcagc tcggcattgg aagagatagg cggggaattt gtaattttcg gattctacga
    11581 aaaagaagat taagtttaag aggctcggca ggcggtctct aaaaccttca caaagcccgc
    11641 aaacacattt ttttaaaaat ttcgt
//
LOCUS       DAWXHA010000073        11564 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.073, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000073 DAWXHA010000000
VERSION     DAWXHA010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11564
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.073"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            158..874
                     /locus_tag="AABD07_001478"
     CDS             158..874
                     /locus_tag="AABD07_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HFB2355980.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILAGLPDLETRLKPLYAMIRCEEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREKKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            1023..1925
                     /locus_tag="AABD07_001479"
     CDS             1023..1925
                     /locus_tag="AABD07_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HFB2355981.1"
                     /translation="MSSLMTLFSVLVPMFAGFFIRVPKPYLPASDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLGDMALTVLWLFVCTVGANLLALAVLGKLSPWRIGGKGKGVSVG
                     VSGSVRQLGCVLIGFVSGKLMCDIWMPSENAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     LNRRGIRLSVWFILSSLSGGLLFAASADGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSTLG"
     gene            1968..2742
                     /locus_tag="AABD07_001480"
                     /pseudo
     CDS             1968..2742
                     /locus_tag="AABD07_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
     gene            2854..4542
                     /locus_tag="AABD07_001481"
     CDS             2854..4542
                     /locus_tag="AABD07_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HFB2355982.1"
                     /translation="MLNKDQFADNHFIRTIIEDDLKSGKHEAVQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     DYFDRLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMAAGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGVRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFQAGKTQSRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCGEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPGAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRQDHGKDTPVFNRTVTLKDSWQPK"
     gene            4634..5590
                     /gene="gshB"
                     /locus_tag="AABD07_001482"
     CDS             4634..5590
                     /gene="gshB"
                     /locus_tag="AABD07_001482"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HFB2355983.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     NGGLVTAQASAFEFSGAKNDDDHEWFKAADKVQTALKEFDAVIMRTDPPFDMQYLYST
                     QLLTLAEQQGAKVFNSGRAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IVKPLDGMGGMGIFRLTEKDPNIGSILETLMRFDSRTIMAQRYIPEIVHGDKRILIIG
                     GKVVPYALARIPQNGETRGNLAAGGRGVAQELDGRDREIAETLAPELKRSGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKSFDVAAMFADAVAAWSVR"
     gene            5749..6132
                     /locus_tag="AABD07_001483"
     CDS             5749..6132
                     /locus_tag="AABD07_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HFB2355984.1"
                     /translation="MEPSSYAAEKKGKSGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNALLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLVAMLMLAAVWLSALFG"
     gene            6264..6737
                     /locus_tag="AABD07_001484"
     CDS             6264..6737
                     /locus_tag="AABD07_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HFB2355985.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKMGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            6862..7965
                     /gene="mnmA"
                     /locus_tag="AABD07_001485"
     CDS             6862..7965
                     /gene="mnmA"
                     /locus_tag="AABD07_001485"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HFB2355986.1"
                     /translation="MNTTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEN
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTIGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELCYLDDETAELVFDEPQW
                     AVTPGQSAVLYDVDICLGGGIIQTTDKPVIITR"
     gene            8036..9706
                     /locus_tag="AABD07_001486"
     CDS             8036..9706
                     /locus_tag="AABD07_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HFB2355987.1"
                     /translation="MEKIWLESYEKGVSAEIDITQYNSVSDVFRQSVEKFARLPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVARGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIVLIANPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVPSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDACGFLETGDIAVMDEKGRLK
                     LVDRKKDLVVVSGFNVYPNEIEEFIAHHEKVMEVACIGVPNEKTGEALKVFVVKKDPS
                     LTKEELTAFCRTGLTAYKVPKDIEFRDELPKSNVGKILRRELRQSAGK"
     gene            9818..11452
                     /locus_tag="AABD07_001487"
     CDS             9818..11452
                     /locus_tag="AABD07_001487"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HFB2355988.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRKMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAVKNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NKGDVSVLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAVKIYGSGHIRERHRHRYEVNNNYVSALEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
BASE COUNT         2818 a         3147 c         3098 g         2501 t
ORIGIN      
        1 tcgccttgcc gtactatttt tgtactgtct gcggcttcgt cgccttgtac tgatttaaat
       61 ttaatccact atactttaat ttctcctaca cgatttgaaa cacagccgtc ttaaaacatc
      121 ttaaaaaatt tgaaagcgta aaaatacgga aaacatcatg aactttgaaa acgacgacat
      181 tatccatgcg ccgaccacgt cttccctgat tctcgaagag cggcacgatt cggagctgtt
      241 ccgtgtttac gccctgattt tggacggcat taccgatcag gtgctgctgc ccggcaaaaa
      301 gctgaccgaa tccgaacttt gccgtcagat ggtgtgttcg cgcaacaccg tccgcggcgc
      361 gctgtcgctt ttggcgcacg acaagattgt cgatttgcaa cccaacaggg gcgcgttcgt
      421 ccacgttccc gatttgaaag aaatgcagga tgtgttcaat gcgcgcatcg aaatggagac
      481 gatgattttg aacatcctcg ccggcctgcc ggatttggaa acgcgcctca agccgcttta
      541 tgcgatgata aggtgcgaag aagaggcctc cggcaggggc gaccgcgtcg gctggaaccg
      601 cctgtccaat gccttccacg tcgaactggc gcgcctggtg ggcaacgatg tgctgttcga
      661 cattatgaac acgctgtgcg cgcggtcttc cctgattgtc gccgtggcgg gcgtgcatcg
      721 cgagaaaaaa cacgccatca atacgcatac gcattccgaa caccgcgaaa tcctcgacct
      781 gctgctggcg ggcaggcgca accgcgtggt caaaatcctg cgccgccatt tgggcaactg
      841 tatggagcgt ttggaaaaga ctttggaaga ttgaatgccg gagcggataa gccgcctgaa
      901 ccttcaggcg gttttttaat ggcgaacctg atgccgtctg aaatatggat gcgggtatct
      961 gcaattttca gacggcaatt tttaagccgc acatatcatg cggcaataaa ggagggtagg
     1021 ggatgagcag cctgatgacg ttgttttcgg tattggtacc gatgtttgcc ggatttttta
     1081 tccgtgttcc caagccttac ctgcccgctt cggacaaggt gctgtcggtt ttggtgtatg
     1141 ccgtgctgct gctgatcggc gtatcgttgt cgcgcgtgga ggatttgggt tcgcggttgg
     1201 gcgatatggc gttgacggtt ctgtggctgt ttgtttgtac ggtaggggcg aacctgcttg
     1261 ccttggcagt gttgggaaag ttgtccccgt ggcggatagg gggaaaaggg aagggcgttt
     1321 cggtcggcgt gtcgggcagt gtgaggcagc tcggatgcgt actgatcggt tttgtgtccg
     1381 gcaaattgat gtgcgatatt tggatgccgt ctgaaaacgc gggtatgtac tgcctgatgc
     1441 tgctggtgtt cctcatcggc gtacagctca aaagtagcgg cgtatcgttg cggcaggttt
     1501 tgcttaaccg gcggggcatc cggctgtcgg tttggtttat attgtcatct ctttcaggcg
     1561 ggctgctgtt tgccgcatcg gcagatggtg tgtcgtggac gaaaggtttg gcgatggctt
     1621 ccggcttcgg ttggtattcc ctctcgggtt tggtaatgac cgaggcttac ggggcggtat
     1681 ggggcagcat catgctgctg aacgatttgg cacgagagct gtttgcactg gcatttattc
     1741 cgctgctgat gaagcgtttt ccggatgcgg cggtgggggt cggcggcgcg accagtatgg
     1801 atttcacatt gcccgtgatt cagggtgcgg gcggtttgga agtcgtgccg gtagcggtca
     1861 gcttcggcgt ggtggtcaat atcgccgccc cgtttctgat ggtggtgttt tccacgctgg
     1921 gctgaacgcg gtaaaatcgg catcccgatg caaggaagca gaaaacgatg aaaccgaaaa
     1981 tccaaaggca tggagagatt ttaagccttg tccgccggca tcagtttatg tcggtggacg
     2041 agcttgccgc cgcattggac gttaccccgc agacgatacg ttgcgacatc cgcgagttgg
     2101 aggagggcgg cagcctgaaa cgccatcacg gcggcgcatc ttcgggcgga aacttgccgg
     2161 agggtctgcc cgccgaccgc caaacccggt gtcaaaacga aaaaaacgcc attgcccggc
     2221 tgattgcgga acacatcccc gacggttcgt cgctgttcgt cagtatcggt acgaccatgg
     2281 aagccgcggc atcagagctg gtgaagcggc gcagcagcct gcggattatt accaacaata
     2341 tccacgtcgc ctccgtcgtt tcggcacgta cggattacac ggtcatcatc acatccggcg
     2401 tcgtccgccc tttggacggc ggtattaccg gcgtggcgac cgtcgacttt atcaaccagt
     2461 tcaaagtcga ttatgccgtg atgagcacgc acggcgtgga aagcgacggt tcgcttttgg
     2521 attacgatta caaggaagtc agcgtcatgc aggcgatgat tgccaacgcg cgcgtccgtt
     2581 ttctcggcgt ggatcacagc aaattccgca gcaacgcgct ggtcaggctc ggcggcatta
     2641 ccggcgtttg acaaagtatt taccgacagg ttgcctgata ccgcgatgca gaagatgctg
     2701 aaagaggcgg gggtggaatg cctgattgcc gatgccgtct gaacgctatg tcaaagcgcg
     2761 caagtcgggt acaataaaca catcatcaaa ccgcttcaga cggcatacgg aacctcccca
     2821 atgccgtctg aagccatctg tttaaagaaa accatgctca ataaagacca attcgcggac
     2881 aaccatttca tccgcaccat catcgaagac gacctcaaaa gcggcaaaca cgaagccgtc
     2941 caaacccgtt ttccgcccga acccaacggc tatttgcata tcggacacgc caaatccatc
     3001 tgcctgaact tcggtttggc gtatatttac gacggtttgt gcaacctgcg tttcgacgac
     3061 accaacccgg aaaaagaaaa cgacgaatac gtcaacgcca tcaaagaaga cgtcgagtgg
     3121 ctcggtttcc attgggcggg cgaaccgcgt ttcgcttccg actatttcga ccggctttat
     3181 gactacgccg tcggtttaat caaagacggc aaagcgtatg tcgatgattt gacgcccgaa
     3241 gaaatgcgag aataccgcgg tacgctgacc gaagcgggta aaaacagccc ttaccgcgac
     3301 cgcagtatcg aagaaaacct cgacctgttc acgcgtatga aaaacggcga gttccccgac
     3361 ggcagcaaaa ccctgcgcct gaaaatcgac atggcggcag gcaacatcaa tatgcgcgat
     3421 cccgtcatct accgcatccg ccgcgcccat caccacaaca ccggtgacaa atggtgcatc
     3481 tacccgatgt acgattacac gcattgcatt tccgatgcca tcgaaggcat cacgcattcc
     3541 ttgtgcacgc tcgaatttga agcgcaccgt ccgctttacg actgggtgtt ggacaacatc
     3601 cccgcgccgc acgccacccg tccgcgccaa tacgagtttt cccgtttgga gcttttgtac
     3661 accattacct ccaaacggaa attgaatcag ttggttgtgg aaaaacacgt ttccggctgg
     3721 gatgatccgc gtatgccgac catttccggt atgcgccgcc gcggctacac gcccgaaggg
     3781 gtgcgcctgt ttgccaaacg cgccggtatt tccaaatctg aaaacatcgt cgacatgagc
     3841 gtgttggagg gtgcgattcg cgaagagctg gaaaactccg ccccgcgcct gatggcggtt
     3901 ttgaacccgc tcaaagtgac cctgaccaac tttcaagccg gcaaaaccca aagccgccgt
     3961 gccgcgttcc atccgaacca cgaagaaatg ggcgatcgcg aagtacctgt ttcacaaacc
     4021 atctacatcg aagccgacga ctttgccgaa aatccgccca aaggcttcaa gcgtctgatt
     4081 cccggcggcg aagtacgctt gcgccacggc tatgtcatca agtgcggtga agtcgtcaaa
     4141 gacgaagcag gcaatgtggt tgaactcaaa tgcagcatcg accacgacac cttgggcaaa
     4201 aatccagaag gccgcaaagt taaaggcgtg attcactggg tttccgccga acacgccgcc
     4261 gaaatcaaag tccgtctgta cgaccgcctc tttaccgtcg agcgtcccgg tgccgtgcgc
     4321 ggcgaagacg gcgaatacct gccgtttacc gatttcctca atccggaatc cgttaaggaa
     4381 atcactgctt acgccgaacc tgccgcgaaa gatttgccgg cggaaagccg ttggcagttc
     4441 gagcgcatcg gctattttgt gaccgaccgc caagaccacg gcaaagacac gccggtgttt
     4501 aaccgcacgg tgacgttgaa agattcttgg cagcctaagt aaaccccatc cttgccgtct
     4561 gaatattgtt cgggcggcat ttctccttta cccgcgaaat gcggcacatt cggcacaccg
     4621 gaaaggaaat atgatgaaag tcctctttat cgccgacccg atggcaagtt tcaaaaccta
     4681 caaagacacc acctacgcga tgatgcggga aatggcaaaa cgcggctggc ggctgtttca
     4741 taccttgagc ggggaattgt ctgtaaacgg cggtttggta acggcacagg catcggcatt
     4801 tgaattttcg ggtgcaaaaa acgatgatga ccatgaatgg tttaaagcgg cggacaaagt
     4861 tcagacggca ttaaaagaat ttgatgccgt gattatgcgt accgatccgc cgttcgatat
     4921 gcaatacctt tactccaccc aattactgac gctggcggaa cagcagggcg cgaaagtgtt
     4981 caacagcgga cgggcgatgc gcgactttaa cgaaaaactg gcgattttga atttcagccg
     5041 ctttaccgcg cccacgctgg taacgacccg ttccgccgat gtccgcgcat ttttgaaaga
     5101 acacggcgac atcatcgtca aaccgctcga cggcatgggc ggcatgggca tcttccgcct
     5161 gaccgaaaaa gaccccaaca tcggcagcat cctcgaaacc ctgatgcggt ttgattcccg
     5221 caccattatg gcgcaacgct acattcccga aatcgtacac ggtgacaaac gcatcttgat
     5281 tatcggcggc aaagtcgtcc cctatgcttt ggcgcgtatc ccgcaaaacg gcgaaacacg
     5341 cggcaatctg gcggcaggcg ggcgcggtgt ggcgcaggaa ttggacggac gcgaccggga
     5401 aattgcagag actctggctc ccgagcttaa acggagcggc atcctgctgg ccggtttgga
     5461 cgttatcggc agcaacctga ccgaagtcaa cgtaaccagc ccgaccggat tccaagaaat
     5521 tatgaaacaa aaaagtttcg acgtggcggc aatgtttgcc gatgccgttg ccgcgtggtc
     5581 ggtacgttaa accgatgccg tctgaaaggc ttttgcttcg taaccgcttg gtttgttcgg
     5641 gcaggcaggg ttttccctcg gccggcaggg atgcgcttaa tgccgtacgg acacccctcc
     5701 gccccgtttt cagacggcat atattgagga cattttgaaa ggataccgat ggaaccttcc
     5761 tcctacgcgg cagaaaaaaa aggcaaaagc ggcatcaggc gcgtcatcaa cgcattcggc
     5821 tattcgatag acggcatcgc cgccgcctac cgttacgaag cggcattccg tcaggttttg
     5881 tggctgaacg cgctgctggt gtgcgcggca tttttttggg tttccgaaac cgccgtccgc
     5941 ctgccgttga ttatcgcgtc ttttgtgtcg gtcattgtcg aactgttcaa caccgccgtc
     6001 gaagccgccg tcgatcatac ttcgaccgaa aaacacgagc tggccaaacg cgccaaagat
     6061 gcaggttctg ccgcacaact ggttgccatg ctgatgttgg cggcggtttg gctgtccgcc
     6121 ctgttcgggt aaaacgcttg cagcaggatt tgtaatcctt taggattagt atttattatt
     6181 cacttaatct acatcaaatt tccgagcagt atttgtatgt aagattaagc acattccccg
     6241 tctgatatta aaggagcagg aagatgaaaa aattattggc agccgtgatg atggcaggtt
     6301 tggcaggcgc ggtttccgcc gccggagtcc atgtcgagga cggctgggcg cgcaccactg
     6361 tcgaaggtat gaaaatgggc ggcgcgttca tgaaaatcca caacgacgaa gccaaacaag
     6421 actttttgct cggcggaagc agccccgttg ccgaccgcgt cgaagtgcat acccacatca
     6481 acgacaacgg cgtgatgcgt atgcgcgaag tcaaaggcgg cgtgcctttg gaggcgaaat
     6541 ccgttaccga actcaaaccc ggcagctatc acgtgatgtt tatgggtttg aaaaaacaac
     6601 tgaaagaggg cgacaagatt cccgttaccc tgaaatttaa aaacgccaaa gcgcaaaccg
     6661 tccaactgga agtcaaaacc gcgccgatgc cggcaatgaa ccacggtcat caccacggcg
     6721 aagcgcatca gcactaatct gctggaaata tttgaaatgc cgtctgaaaa agcccgggct
     6781 ttcagacggc atttttatgc ccgcctttaa aatgtgttaa aatccgcctt taaaaaccgc
     6841 cgtttccaag ccatcctgcg tatgaatacg acatcaaaca cttccaatat catcgtcggg
     6901 ctttccggcg gtgtcgattc ttccgtaacc gccgccctgc tcaagcagca gggttatcaa
     6961 gtgcgcggtg tgttcatgca gaactgggaa aacgacgaca acgacgaata ttgcagcatc
     7021 aaacaggatt cgttcgatgc catcgccgtt gccgatattg tcggcatcga catcgacatc
     7081 gttaatttcg ccgcgcaata taaagacaaa gtttttgctt attttcttca ggaatacagt
     7141 gcggggcgca cgccgaatcc ggatgtgttg tgcaatgccg aaatcaaatt caaatgcttt
     7201 ttggactacg ccgtagggca gggcgcggat accattgcca ccggacacta tgcgcgcaaa
     7261 gaagtccgca acggcgtgca ttacctgctc aaaggtttgg atcgaaacaa agaccaaagc
     7321 tattttctct accgcctcaa gcctttccaa ctcgaacgcg cgatttttcc gttgggcggt
     7381 ttggaaaaac ccgaagtgcg ccgccttgcc gccgaattta atttgccgac tgccgctaaa
     7441 aaagacagta ccggcatctg tttcatcggc gagcgtccgt tccgcgagtt tctgcagaaa
     7501 tacttgccga ccgacaacgg caaaatggtg acgcccgaag ggaaaaccat cggcgaacac
     7561 gtcgggctga tgttttacac attgggtcag cgcaaaggat tgggcatcgg cggcgcgggc
     7621 gaaccgtggt ttgttgcggc taaagatttg acgaaaaacg aactcatcgt cgtacaagga
     7681 cacgaccatc cgctgctcta tacccgcagc cttgtgatga acgatttgag tttcacgctg
     7741 cccgaacgtc cgaaggcagg acgctatacc tgcaaaacgc gttaccgtat ggcggacgcg
     7801 ccttgcgaat tgtgctattt ggatgatgaa accgccgagc tggtgtttga cgaaccgcaa
     7861 tgggcggtta cgccgggtca gtccgccgtg ctgtacgacg tcgacatctg tttgggcggc
     7921 ggcatcatcc aaacgaccga caaacccgtc atcatcacgc gataaaggta atgccgtctg
     7981 aaacggtttt cagacggcat tgttccgctc aattccactt taaagaccga tacctatgga
     8041 aaaaatctgg ttagaaagct acgagaaggg cgtcagtgcc gaaatcgaca tcacgcaata
     8101 caattccgtc agcgacgtat tccgccaaag cgtggaaaaa tttgcccgtc tgcccgcttt
     8161 tcaaaatatg ggcaaaacgc tcacttatgc cgaaaccggc aaactggcga ccgatttcgc
     8221 ctcttatctg caaaacgtcc tcaagctgcc gcgcggcgaa cgtgttgcca ttatgatgcc
     8281 gaacgtattg caatatccga ttgccctttt cggtattttg caggcaggtt tggtggcggt
     8341 gaacaccaat ccgctctata cgccgcgcga gttggagcat cagctgaaag acagcggtgc
     8401 gaccgccatc atcgttttgg aaaatttcgc caacacgctg gagctggtgc tgccgcgcac
     8461 gcagatcaaa cacgtcatcg tcgcctccgt cggcgaaatg ttcgggctgc ttaaaggttc
     8521 gctgatcaat ttcatcatcc gaaaaatcaa gaaaatggtt cccgaatacc gtattcggga
     8581 aaccgtttcc tttcagacgg cattgaaaga gggggcgaag cacgttttcc aacctgtcgc
     8641 attaaaccgc gaagataccg cattgttgca atacacgggc ggcacgacag gcgttgccag
     8701 aggcgcggtg ctgagccacg gcaacatctg cgccaatatg cttcaggcaa aagaatggat
     8761 taaaaaccaa ttgcgcgagg gaaaagaaac cgttatcgcc gccctgccgc tgtaccacat
     8821 cttcgccctg acagtgaatc tgatgatttt tgccaatgcc ggctcgaaaa ttgtcctgat
     8881 tgccaacccg cgcgatatga aaggctttat cggcgaactg aaaaagcagc gggttaacgt
     8941 atttatcggc gtgaacacgc tgtttaacgc gatggtcaac cggcccgatt tcgccgaagt
     9001 cgatttttca ggattgcggc tgactttggg cggcggtatg gcgacccaaa aagccgttgc
     9061 cgaaaaatgg aaaaaaatca ccggcacgcc catcgtcgaa gcctacggtt tgaccgaagc
     9121 cagccccggc gtgtgctgca accccttaaa catcgaatca tacagcggca gcatcggttt
     9181 gcccgtcccg tccaccgaag tcgaactgcg cgacgcaaac ggcaaagaag tccccgttgg
     9241 gcagccgggc gaattgtggg taaaaggccc gcaagtgatg caaggctact ggaaccgccc
     9301 cgaagaaacc gccaaagcca tagacgcgtg cggctttttg gaaaccggcg atattgccgt
     9361 gatggacgaa aaaggccgtc tgaagctggt cgatcgcaaa aaagacctcg tcgtcgtttc
     9421 cggattcaat gtttatccga acgaaatcga ggaattcatc gcgcaccacg aaaaagttat
     9481 ggaagttgcg tgtatcggcg ttccgaacga aaaaaccggc gaggcactca aagtgttcgt
     9541 cgtcaaaaaa gacccgtctt tgaccaaaga agaactcacc gctttctgcc gtaccggtct
     9601 gaccgcatac aaagtgccga aagacatcga attccgcgac gagttgccca agtccaatgt
     9661 cggcaaaatc ctgcgccgcg agttgcgcca aagtgccggg aaataaagaa aagataccgt
     9721 ctgaaaacag ccgtccaccg ttcagacggc atccgtccgt ttgccagaac cgcgcgcttc
     9781 acgttaaaat cacgcattcc aacatgggta ttccatcatg accaaattca ttttcgtaac
     9841 cggcggcgtt gtctcctcac tgggtaaagg tatcgccgcc gcttctattg ccgccatcct
     9901 cgaatcgcgc ggcttgaacg ttaccatgct caagcttgat ccttatatca acgtcgatcc
     9961 cggcacgatg agcccgttcc aacacggcga agtgttcgta accgacgacg gcgcggaaac
    10021 cgacctcgac ttgggacact acgaacgttt catcgattcc acgatgaccc gccgcaacag
    10081 cttcagcacg ggtcaggtgt acgaaaacgt tatcgccaaa gaacgccgcg gcgactatct
    10141 cggcggtacg gttcaagtca tcccgcacat taccgacgaa atcaaacgac gcatccacga
    10201 aggcgcggcg ggttacgatg tggcgattgt cgaaatcggc ggtacggtcg gcgacatcga
    10261 atcgctgccg tttttggaag ccatccgcca gatgcgaagc cagttgggac gcaacaacac
    10321 cctgttcgcc cacttgagct acgttcccta catcgccgcc gcaggcgaaa tcaaaaccaa
    10381 gccgacccag cacaccgtga aagaaatgtt gagcatcggc ttgcaacccg acatcctgat
    10441 ttgccgtatg gacaggaaaa tgccggcaga cgaacgccgc aaaatcgcct tgttctgcaa
    10501 cgtggaagag cgcgcgattg tcggcagcta cgatgtggac agcatctacg aatgccccga
    10561 aatgctgcac gaccaaggca tcgacaacat cattaccgag cagttgcagc ttaacgtgca
    10621 gcaggcggat ttgaccgcgt ggaaaaaaat cgtccacgcc gtcaaaaacc cgaaacacac
    10681 cgtcaaaatc gcgatggtcg gcaaatacgt tgatttgacc gaatcctaca aatcattgat
    10741 tgaagccttg aaacacgcgg gcatccatac cgaaaccgat gtgcagatta ccttcgttga
    10801 cagcgaaagc atcgagaaaa acaagggcga cgtttccgta ctcaaagata tggatgccat
    10861 cctcgttccc ggcggcttcg gttcgcgcgg cgtggaaggc aaaatcgccg ccgtgcgcta
    10921 cgcccgtgaa aacaacgtgc catacttggg catctgcctc ggtatgcaga ttgcgctgat
    10981 tgaatacgcc cgcgacgtgg caggtttgaa aggtgcgaat tccactgagt ttgacttgaa
    11041 atgcgctgcc cccgtcgtcg ccctgattga cgaatggcaa accgccgacg gcagcgtcga
    11101 aacccgtgac gaatccgccg atttgggcgg cacgatgcgt ttgggcgcgc aagaagtcga
    11161 attgaaagca ggcagcctcg ccgtcaaaat ctacggcagc ggacacattc gcgaacgcca
    11221 ccgccaccgc tacgaagtca acaacaacta cgtttccgcg ctggaacagg caggtttggt
    11281 catcggcggc gtatccgccg gacgcgaacg cttggtcgaa accatcgaac tgccgaacca
    11341 tccttggttc ttcgcctgcc agttccatcc cgagttcacg tccaacccgc gcaaagggca
    11401 tcctttgttc accgcgtttg tcaaagccgc gttgaacaat aaaaaagcct gataaagcgt
    11461 tacttgatga tcaaaatgcc gtctgaaagc ctgacaaaga ctttcagacg gcattttcgc
    11521 aaatcgggga tcataaaagc catcaattta atttgggtct gtac
//
LOCUS       DAWXHA010000074        11496 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.074, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000074 DAWXHA010000000
VERSION     DAWXHA010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11496
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.074"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(77..1156)
                     /gene="apbC"
                     /locus_tag="AABD07_001488"
     CDS             complement(77..1156)
                     /gene="apbC"
                     /locus_tag="AABD07_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HFB2355989.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVGQRSDGIHIALHF
                     GFPVAHIAAALADAVQETLMPETGGAHIHLSMDTEIGTHKVRPGVATIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVHDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTGQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPARLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
     gene            1375..1450
                     /locus_tag="AABD07_001489"
     tRNA            1375..1450
                     /locus_tag="AABD07_001489"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1408..1410,aa:Lys,seq:ttt)
     gene            1523..2032
                     /locus_tag="AABD07_001490"
     CDS             1523..2032
                     /locus_tag="AABD07_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HFB2355990.1"
                     /translation="MKKKLLSGIKFAVRTALVFLLVSLFLDWVRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDRTVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVSDEDGGLARSWRIVATPAVVLVKNGKMVRYTTGISSYWGLRA
                     RIFQADFFG"
     gene            2373..2813
                     /gene="nadR"
                     /locus_tag="AABD07_001491"
     CDS             2373..2813
                     /gene="nadR"
                     /locus_tag="AABD07_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HpaR family adhesin repressor NadR"
                     /protein_id="HFB2355991.1"
                     /translation="MPTQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVYLKLTSEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            2928..3428
                     /gene="hpaC"
                     /locus_tag="AABD07_001492"
     CDS             2928..3428
                     /gene="hpaC"
                     /locus_tag="AABD07_001492"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HFB2355992.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINMLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRPLD"
     gene            3444..4139
                     /locus_tag="AABD07_001493"
     CDS             3444..4139
                     /locus_tag="AABD07_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HFB2355993.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIENALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVANGDVLTDIDFTAAFQTASSLPGHISAHLWLVGNPPHNPDGDFSLLPDGSVRPEVS
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLLNEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAAAWK"
     gene            complement(4193..4603)
                     /locus_tag="AABD07_001494"
     CDS             complement(4193..4603)
                     /locus_tag="AABD07_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFB2355994.1"
                     /translation="MGSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFAAFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGRNRTFLVLSGLATGASWLAYFKALQLGNAPQVAPVD
                     KFSLVLVALMAVIFLDERPNTQEWIDLGLVTAAC"
     gene            4778..6454
                     /locus_tag="AABD07_001495"
     CDS             4778..6454
                     /locus_tag="AABD07_001495"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HFB2355995.1"
                     /translation="MSFKTDAETAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RFGNILVAYAKDGSPVYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIDNQPNNFGFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            6568..7659
                     /gene="ychF"
                     /locus_tag="AABD07_001496"
     CDS             6568..7659
                     /gene="ychF"
                     /locus_tag="AABD07_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HFB2355996.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNRFLANIRETDAIVN
                     VVRCFDDDNIVHVSGKVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERALLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            7697..7936
                     /locus_tag="AABD07_001497"
     CDS             7697..7936
                     /locus_tag="AABD07_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2355997.1"
                     /translation="MPSEAGFGGFRRSHTAGMQPHQNKIPPAFPICPPRFLQNKPPAL
                     PLREAVRYSEYPEPRYKMTFQTAFAQPAAFQVKTL"
     gene            7933..9807
                     /locus_tag="AABD07_001498"
     CDS             7933..9807
                     /locus_tag="AABD07_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HFB2355998.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKDWLPGGFLGVDIFFV
                     ISGFLMTAILLREMSGGRFFLKTFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFFL
                     LWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVAR
                     KSLRVQFGFLAALCALSLAASFMPSALDKYYLPHLRACEMLVGSLTAVRMRYRQQRNP
                     AVGKRYAAVGALFSACILSACLFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLK
                     KFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAIVLTLAFSLISYH
                     CIEKPFKKWKGSFAQSVLWIYALPMLVLGAGSFFAMRLPFMAQYDRLGLTRSNTSCHN
                     NTGKQCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYA
                     SRVFQNWAACRAVYRYAEEHLPRYPKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRML
                     HKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGCRQTLRPDDESTLKANARIRELA
                     AKYPNVYIIDAAAYIPADFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRHNH
                     "
     gene            9869..11164
                     /gene="tyrS"
                     /locus_tag="AABD07_001499"
     CDS             9869..11164
                     /gene="tyrS"
                     /locus_tag="AABD07_001499"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HFB2355999.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIR
                     SQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIGVVEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSRLTES
                     DFEQLALDGLPAFEVSDGINAVEALVKTGLAASNKEARGFVNAKAVLLNGKPAEANNP
                     NHAAERPDDAYLLIGEYKRFGKYTILRRGKRNHALLVWK"
BASE COUNT         2553 a         3133 c         3208 g         2602 t
ORIGIN      
        1 gggagagagg actatgaagc ccgccggcag gcgcggggct tcagacggca ttgctgttgc
       61 ggtttcgggc gcggctttat tcgacgacaa ttttagggaa ccggctgctg aagtctttgc
      121 ctttgtcggc aatgcccagg gcgatttgga atgcggcatc ggtgtagatt cgggcgatgg
      181 cggggtgttc gtcgaacagt cgcgccggtg tgccgccgtc catggcttcg cgtacgggca
      241 ggcttagggg aagctgtccg agcaggggga cgttgaggcg tgccgccaaa tctttgccgc
      301 cgtccgtgcc gaacagtgct tcgctatgcc cgcagttgga gcagatatgg acggacatgt
      361 tttccaatac gcccaaaatg ggaatgttga ccttgcggaa catatccacg gctttgcgcg
      421 cgtctatcag cgcgatgtcc tgcggcgtgg ttacgatgac ggacccggtt acggggatgc
      481 gttgggacag cgtgagttgg atgtcgcccg tgccgggggg caggtcgatg aaaagatagt
      541 ccacttcgtc ccactcgctt tggaacatca gctgctgcaa ggcttggctg accatcggcc
      601 cgcgccagac gacggcttgg ccggtatcga cgagaaagcc gatggacatg acctgtatgc
      661 cgtctgaaga ttcgacggga atgagttttt ggtttttctg atcgggtttg cggtcgtgta
      721 cgcccagcat cgtgggctgg ctcgggccgt aaaggtcggc atcgagcacg ccgacgcgcg
      781 cgcccatgcg cgccattgcg gcggcaaggt tggcggtggt tgttgatttg cccacgccgc
      841 cttttcccga tgcgacggca atgatgtttt tcacgccttt gatggtggcg acgccgggcc
      901 ggactttgtg tgtgccgatt tcggtgtcca tggacagatg gatgtgcgcg ccgcctgttt
      961 cgggcatcag ggtttcttgt acggcatcgg cgagggcggc ggcgatgtgc gcgacaggga
     1021 aaccgaaatg cagggcgatg tggatgccgt ctgaacgctg tccgaccgaa cggacggcct
     1081 tttcgccgcc gagcgtgcgt gccgtattcg gaacggcgac ggtgtcgagg agggtgcgga
     1141 tgttttgtat attcatgatg tgtgcctctg ttcgcaagtc gtgtgagggg aagatagacg
     1201 gaaagtgtac atgattttgg gcagtttgct tttttcttgt gcgaactttt acacggtatg
     1261 cggcggattg tgaaaatccg ttgccaaaat atcccgtgca aacagcagtc tgcaattaag
     1321 cctgtaaaat ttgcttgacg gcggggaacg gggctgtata atgcacggct tatcgggtcg
     1381 ttagctcagc cggtagagca gcggactttt aatccgttgg tcgagcgttc gaatcgctca
     1441 cgacccacca gataaccgga agccaagttt cgagacttgg cttttttgtt tgcctgccgg
     1501 ggcgtaccgt ttgcgggggt gtatgaaaaa gaaactgctt tcgggcatca aatttgccgt
     1561 tcggacggca ttggtgtttt tgctggtgtc gctgtttttg gattgggtac gcaagcccga
     1621 cgaacctgcc ggggcggcag ggcggccttt gaccctgctg tcggggcagc ggctgacttt
     1681 gggacagttt agccgggata ggacggtgct ggtgtatttt tggggaagct ggtgcggcgt
     1741 gtgccgttat cagtcgccga taatcgatga tttggcggcg gacggcgtgc cggtcgtcgg
     1801 tgtggcggta cgttccggca gcgcgtccga agtggcggca tatatggcaa aacggggctt
     1861 gggctttccg actgtcagcg atgaggacgg gggtttggca aggtcttggc ggattgtcgc
     1921 aacgcctgcc gtcgttttgg tcaaaaatgg gaaaatggtc cgctatacga cgggaatcag
     1981 cagttattgg ggcttgcgcg cacgaatttt tcaggcggat tttttcggtt aacttttgtt
     2041 tttgtcaaac tttccgctat gtagagaatc aaacggcata tgccttgcgc ggcggatgcg
     2101 gcggcttttg ttttttggga aagagccggc gcgcctgccg atgtaatccc ttgttgtgat
     2161 tgtgggaaaa atagattaaa atataactat taaaatattt tcagatagga ttatcggaat
     2221 taaagtcttt tatacccggt cgtccgatga ggtttatagc gtattgttgc tatatgttcg
     2281 ttttgttata taacggttgc atcaaaaatt acgcccacag gctttcccga cggtttgaaa
     2341 gtttgatttt cgataacttg gagacttaaa caatgcctac ccaatcaaaa catgcgtcta
     2401 tcaatatcgg tctgatacag gcaagggaag ccctgatgac ccaattcagg cctattctga
     2461 atcaggcgaa tattaccgat cagcaatggc ggattatccg tcttttggcg gaaaacggca
     2521 cattggattt tcaggatttg gcgaatcagg cgtgcatttt gcgccccagc ctgaccggta
     2581 tcctgacccg ccttgaaaaa gcggggttgg tcgtccgcct gaaaccttcc aacgaccaac
     2641 ggcgcgttta tctgaagctg acttccgagg gcgagaagct gtatgaggaa atcggcgaag
     2701 aagtggacga gcgttacgac gctatcgagg aagtgctggg ccgcgagaaa atgctgctgc
     2761 ttaaagacct gttggcagaa cttgccaaaa tcgaggatgc gttgaactcg taatacgccg
     2821 taatgcgcgg aaacgtccga ccgacggctt tttgaatcag aactgctgca catgggggat
     2881 gccttgtgtg cagcattctt atatagggga cggtttaaag gggaaaaatg gcggatttgc
     2941 agaaaacttt tcaaacttcg ttccgtgatg cgatggcatc ctgtgcggca ggcgttcatg
     3001 tcatcacgac agacggtgcg gcagggcgtt acggcattac aatgacggcg gttgcgccgg
     3061 ttaccgacga gccgccgacc gtgatgctgt gcataaaccg gagtgcgcga atcattccga
     3121 tcctgtcgga aaacggcagc ctctgcatca atatgctggc ggacgaacat caggatgttg
     3181 ccgaacattt tgccgggctg accggcctgt cgcccgaaga gcggtttgcc taccatattt
     3241 ggcatcgcgg caaaacggga caacttgaaa tagaaggcgc gttggcgcac ctgcacgggc
     3301 atattgtcgg caaacatgaa atcggcacgc attttgtgtt ttacgtcagg ctcgacgaaa
     3361 tcaaaaactg cgggtgcaaa cgccccgcgc tgctgtattt cagacggcag tttaggcctt
     3421 tagactgata ttcggacaga tatatgaaag cgatgatact ggcggcagga cgcggcgagc
     3481 gtatgcgccc tttgaccgac accactccga agccgctgct cgatgtggcg ggtaagcctc
     3541 taatcggttg gcacttgtgc cgtctgaagc aggcggggtt taccgaaatc gtcatcaacc
     3601 acgcttggct gggtcggcag atagaaaatg ctttgggcga cggctcggct tatggcgtga
     3661 acatcgccta ttcgcccgaa cccgcaggcg gtttggaaac ggcaggcggc atcgcgcagg
     3721 cattgccgct gttgggtggg cagccgtttt tggtggccaa cggcgacgtg ctgaccgaca
     3781 tcgattttac cgccgcgttt cagacggcat cgtccctgcc cgggcacatt tccgcacatt
     3841 tgtggctggt gggaaatccc ccgcacaacc ccgacggcga tttttccctg ctgcccgacg
     3901 gcagcgtgcg gccggaagta tccggcggca acggactgac attcagcggc gtgggtattt
     3961 accgtcctga aatgtttgac ggaatcgaag cgggcagtgt ggcaaaactc gcgcccgtat
     4021 tgctgaacga aatgcggcaa aaccgcgtga gcggtcagaa gcatacgggc ctgtggctgg
     4081 atgtcggcac ggtatgccgt ctgaaggaag cgcaagccct tgcagcggct tggaagtgaa
     4141 aactcggttt caggcggtat ggcggattcg gtttaacgtt tcagtgccaa cgtcaacacg
     4201 ccgccgtaac cagccccaag tctatccatt cctgcgtgtt cgggcgttcg tctaagaaaa
     4261 tcaccgccat cagcgcgacc aagaccaggc tgaatttgtc gacgggcgcg acttgcgggg
     4321 cgttgcccag ttgcagggct ttgaagtagg cgagccaaga tgcgccggtg gcgagtccgg
     4381 acaaaaccag aaacgtccgg ttgcgccccg tgaagccgtt tacgccctgc catttgccgg
     4441 tgtaggtcaa aaacaatacc aaggcggcga ggatgaccaa ggtgcggata aaggcggcga
     4501 aatccgaatc tatgccctgc aagcccattt tggcgaaaac ggcggtcaat gaggcgaagc
     4561 ctgccgatgc caatgcccaa aacagccatg cgttgctgcc catgttttct cctttgattg
     4621 tgaacaatat gaacggtatt tttgttgctg cgtcaaaaat ttcactgcgg gtttggtgcg
     4681 gataacgtta taatatgcct gatattattt tcaatccacc tgtttgtcgc ctgatgcttt
     4741 cagacggcat gtccctcctc atttctaaag gaaaatcatg agcttcaaaa ccgatgccga
     4801 aaccgcccaa tcctccacca tgcgcccgat tggcgaaatt gccgccaagc tgggtttgaa
     4861 cgttgacaac attgagcctt acggtcatta caaagccaaa atcaatcctg ccgaagcgtt
     4921 caagctgccg caaaaacaag gcaggctgat tttggttacc gccatcaacc cgactccggc
     4981 gggcgaaggc aaaaccaccg taaccatcgg tttggcggac gcattgcgcc atatcggcaa
     5041 agactctgtg attgctttgc gcgagccttc tttgggtccg gtgttcggcg tgaaaggcgg
     5101 cgcggcaggc ggcggctacg cgcaagtttt gccgatggaa gacatcaacc tgcacttcac
     5161 cggcgacttc cacgccatcg gtgcggcgaa taacctcctc gccgccatgc tcgacaacca
     5221 tatctaccaa ggtaacgagt tgaacatcga ccccaaacgc gtgctgtggc ggcgcgtggt
     5281 cgatatgaac gaccgccagt tgcgcaacat catcgacggt atgggcaagc ctgttgacgg
     5341 cgtgatgcgt cccgacggct tcgacatcac cgtcgcctcc gaagtgatgg cggtattctg
     5401 ccttgccaaa gacatcagcg atttgaaaga gcgttttggc aatattctcg tcgcctacgc
     5461 caaagacggc agccccgttt acgccaaaga tttgaaggca cacggcgcga tggcggcatt
     5521 gctaaaagat gcgattaagc ccaatttggt gcaaaccatc gaaggcactc cggcctttgt
     5581 acacggcggc ccgttcgcca acatcgccca cggctgcaac tccgttaccg caacccgtct
     5641 ggcgaaacac cttgccgatt acgccgtaac cgaagcaggc ttcggcgcgg acttgggtgc
     5701 ggaaaaattc tgcgacatca aatgccgcct tgccggtttg aaacctgatg cggcagtcgt
     5761 cgtggcgact gtccgcgccc tgaaatacaa cggcggcgtg gaacgcgcca accttggtga
     5821 agaaaacctc gaagccttgg caaaaggttt gcccaacctg ttgaaacaca tttccaacct
     5881 gaaaaacgta ttcggactgc ccgtcgtcgt tgcgctcaac cgcttcgtgt ccgactccga
     5941 tgccgagttg gcgatgattg aaaaagcctg tgccgaacac ggcgttgaag tttccctgac
     6001 cgaagtgtgg ggcaaaggcg gcgcgggcgg cgcggatttg gcgcgcaaag tcgtcaatgc
     6061 catcgacaac caacctaata acttcggttt cgcctacgat gtcgagttgg gcatcaaaga
     6121 caaaatccgt gcgattgccc aaaaagtgta cggcgcggaa gatgtcgatt tcagcgcgga
     6181 agcgtctgcc gaaatcgcct cgctggaaaa actgggcttg gacaaaatgc cgatctgcat
     6241 ggcgaaaacc caatattcat tgagcgacaa cgccaaactc ttgggctgcc ccgaaggctt
     6301 ccgcatcacc gtacgcggta tcactgtttc cgccggcgcg ggcttcatcg ttgcgttgtg
     6361 cggcaatatg atgaaaatgc cgggcctgcc gaaagttccg gctgccgaga aaatcgatgt
     6421 ggacgaacac ggcgtgattc acggcttgtt ctgaacggtt tttgaaaccg gatgccgtct
     6481 gaagccgttt cagacggcat tttttcggaa cgcgggcggc ggtatgctat aatccgccgt
     6541 taaatttctc tattttcagg aaaaaccatg agtttgaaat gcggcatcgt cggtttgccc
     6601 aacgtcggca aatccaccct ttttaacgcg ctgacccaat cgggcatcga agcggcaaac
     6661 tatcccttct gcaccatcga acccaacgtc ggcatcgtcg aagtgcccga cccgcgtatg
     6721 gcggagctgg cgaaaatcgt caatccgcaa aaaatgcagc ccgccatcgt cgagtttgtc
     6781 gatattgccg gcttggttgc gggcgcgagc aaaggcgaag gcttgggcaa ccggttcctt
     6841 gccaacatcc gtgaaaccga tgccatcgtc aacgtcgtgc gctgctttga cgacgacaac
     6901 atcgtccacg tttccggcaa agtcgatccg attgccgaca tcgaaaccat cggcaccgaa
     6961 ttggcgcttg ccgacttggc aagtgtggaa aaagccatcg tccgcgaaga aaaacgcgcc
     7021 cgatcaggcg acaaagacgc gcaaaaacta gtcgatttgt gcaaaaaact gctgccgcat
     7081 ctggacgaag gcaaacccgt gcgttccttc ggtttggacg cggaagaacg cgcgctgctg
     7141 aagccgctgt tcctgctgac cgccaaacct gcgatgtatg tgggaaacgt tgccgaagac
     7201 ggttttgaaa acaacccgca cctcgaccgc ctgaaagaat tggcggcaaa agaaaacgcc
     7261 cccgtcgttg ccgtctgcgc cgcgatggag agcgaaatcg ccgaattgga agacggtgaa
     7321 aaagccgaat ttctcgccga aatgggcttg gaagaaccgg gcttgaaccg cctcatccgc
     7381 gcgggttacg accttttggg actgcaaacc tacttcaccg ccggcgtgaa agaagtccgc
     7441 gcgtggacga tacacaaagg cgacaccgcg ccgcaagccg ccggcgtgat ccatacggat
     7501 tttgaacgcg gcttcatccg cgcccaagtg attgcctacg atgattttgt ctcgctcggc
     7561 ggcgaagcca aagccaaaga agccggcaaa atgcgcgtgg aaggcaagga atacgtcgtg
     7621 caggacggcg acgtgatgca ctttttgttt aacgtgtaac ccaaatgcgg caggttttca
     7681 gacggctttg ccggaaatgc cgtctgaagc cggttttggt ggttttcgac gttcccatac
     7741 cgccggaatg cagccgcatc aaaataaaat cccgcccgca tttccgattt gccctccccg
     7801 attcctgcaa aacaaaccgc ctgccctgcc gttacgggaa gccgtccggt attccgaata
     7861 tcccgaaccc cgatacaaaa tgacctttca gacggcattt gcacagcccg ccgcgtttca
     7921 agtaaaaaca ttatgagcca agccttaccc taccgcccgg acatcgacac attgcgcgcc
     7981 gccgccgtct tgtccgtcat cgtgttccat atcgaaaagg attggctgcc gggcgggttt
     8041 ctcggtgtcg atatattctt tgtgatttca ggctttttga tgacggcgat cctccttcgc
     8101 gaaatgtccg gggggcgttt cttcctcaag acattttata tccgccgcat caaacggatt
     8161 ttgcccgcat ttttcgccgt attggcggca acgctggcag gcggcttctt tttattcacc
     8221 aaagatgatt tctttctttt gtggaaatcc gcgctgaccg ccttgggttt cgcctccaac
     8281 ctgtattttg caagggggaa ggattatttc gatcccgcgc aggaagaaaa gcccctgctg
     8341 cacatctggt ctttgtcggt cgaagaacaa ttttactttg tctttccgat attgctgttg
     8401 cttgtcgccc gcaaaagcct gcgcgtacag ttcggcttcc tcgccgcatt gtgcgcctta
     8461 agccttgccg cttcctttat gccttccgcg ctcgataaat attacctgcc ccacctgcgc
     8521 gcctgcgaaa tgctggtcgg atcgctgacc gccgtgcgga tgcggtaccg gcaacagcgg
     8581 aatcccgccg tcgggaaacg gtatgccgcc gtcggcgcat tgttttccgc gtgcatactg
     8641 tccgcctgcc tgtttgccta ttcggaacaa accgcctatt tcccgggccc cgccgccctg
     8701 attccctgtc tggctgttgc cgcgctgatt tatttcaacc attacgaaca cccgcttaaa
     8761 aaatttttcc aatggaaaat cactgttgcc gccggtttga tttcctattc gctttatctg
     8821 tggcattggc cgatattggc ctttatgcgc tatatcggcc cggacaacct gccgccttat
     8881 tcgccggcgg cagcgatcgt cctgaccctg gcgttttccc tgatttctta tcactgcatc
     8941 gaaaagccgt ttaaaaaatg gaaaggctcg ttcgcacaat ccgttttatg gatttatgcc
     9001 ttgcctatgc tcgttttggg ggcgggctcg tttttcgcga tgaggctgcc gtttatggcg
     9061 caatacgacc gcttggggct gacgcgttcc aacacctcct gccacaacaa taccggcaaa
     9121 caatgcctgt ggggggatac ggaaaaacag ccggaactgc tggttttggg cgactcccac
     9181 gccgaccatt acaaaacatt cttcgatgcc gtgggcaaaa aagaaaaatg gtccgccact
     9241 atggtttccg ccgacgcctg cgcctatgtg gaaggctacg cgtcccgtgt gttccaaaac
     9301 tgggccgcct gccgcgccgt ttaccgctat gccgaagaac acctgccccg gtatccgaaa
     9361 gtggttttgg cgatgcgctg gggcagccag atgcccgaaa acagccgctc ccttgcctac
     9421 gatgccggtt ttttccaaaa attcgaccgt atgctgcaca aactctcatc cgaaaaacaa
     9481 gccgtttacc tgatggcgga caacttggct tcgtcttaca acgtccagcg cgcctatatc
     9541 ttgtcttcac gcataccggg ttgccgccaa acactgcgcc cggacgacga aagcaccctg
     9601 aaagccaatg cccgcatcag ggaattggca gccaaatacc ccaacgtcta tattattgat
     9661 gccgccgcct atatccccgc agatttccaa atcggcggat tgccggttta ctcggacaaa
     9721 gaccacatca acccttacgg cggcacagaa ttggcgaagc gtttttccga aaaacaaagg
     9781 tttctcgata cgcgccataa ccattgattc gcttaaattt gttacaatcg gcggtttgca
     9841 aaaccgctaa tttttttgaa agagaccgat gagcgtcatc caagacctgc aatcgcgcgg
     9901 ccttatcgcg caaaccaccg acatcgaagc cttagacgct ttgctgaacg aacaaaaaat
     9961 cgccctttac tgcggtttcg acccgacagc cgacagcctg cacatcggac acctgctgcc
    10021 cgtattggca ttgcgccgct tccaacaggc ggggcatacg ccgattgcac tggtgggcgg
    10081 cgcgaccggt atgatcggcg accccagctt caaagccgcc gaacgcagct tgaattccgc
    10141 cgaaaccgtt gccggctggg taggaagcat acgcagccaa ttaacccctt tcttgagctt
    10201 tgaaggcgga aacgccgcca ttatggcgaa caatgccgac tggttcggca gcatgaactg
    10261 cctcgacttc ctgcgcgaca tcggcaagca tttctccgtc aacgccatgc tgaacaaaga
    10321 atccgtcaaa cagcgcatcg accgcgacgg cgcaggcatt tcctttaccg agttcgccta
    10381 ttccctgctg caaggctacg acttcgccga gttgaacaaa cgccacggcg cggttttgga
    10441 aatcggcggt tccgaccagt ggggcaacat caccgccggt atcgacctga cccgccgcct
    10501 gaaccaaaaa caagtgttcg gtctgaccct gcctttggtt accaaatccg acggtaccaa
    10561 attcggcaaa accgaaggcg gcgcggtgtg gctgaacgcg aaaaaaacct cgccgtacca
    10621 gttctaccag ttctggctga aagtcgccga tgccgatgtg tataaattcc tgaaatactt
    10681 taccttcctg tccatcgaag aaatcggtgt cgtcgaagcc aaagacaagg caagcggcag
    10741 caagcccgaa gcgcaacgca tcctcgccga agaaatgacc cgcctgattc acggcgaaga
    10801 agcccttgcc gccgcgcaac gcatttccga aagcctgttt gccgaagacc aaagccggct
    10861 taccgaaagc gacttcgagc agctcgccct cgacggcctg cctgcatttg aagtttcaga
    10921 cggcatcaac gccgtcgaag ccttggtcaa aaccggcttg gcagcgtcca acaaagaagc
    10981 gcgcggcttt gtcaatgcca aagcggttct gctcaacggc aaaccggctg aagccaacaa
    11041 ccccaaccac gccgccgaac gccccgacga tgcctatctg ttgataggcg aatacaaacg
    11101 tttcggcaaa tacaccatcc tccggcgcgg caaacgcaac cacgcgcttt tggtttggaa
    11161 ataatccgat tgccgcagaa atgccgtctg aagctttcag acggcatttt tatcaaatgc
    11221 aaaacaccct gcgcctgccg atatgtcgtc atttccatgc aggcgggaat tcaaacttgt
    11281 ccgcacggaa acttatcggg caaaacggtt tcttcagttc tacgttctag atgcccgctt
    11341 tcgtgggaat gacggttcag ttgctacggt tactgtcagg tttcggttat gttggaattt
    11401 cgggaaactt atgaattgtc attcccgcga aagtgggaat ccaggactga aaatctcaag
    11461 aaaccgtttt gcccgataag ttcctgcact gacaga
//
LOCUS       DAWXHA010000075        11130 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.075, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000075 DAWXHA010000000
VERSION     DAWXHA010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11130
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.075"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(174..1202)
                     /gene="trpD"
                     /locus_tag="AABD07_001500"
     CDS             complement(174..1202)
                     /gene="trpD"
                     /locus_tag="AABD07_001500"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HFB2356000.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMCEFASKVPLEDADGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVMEQMGANLNLTPEQIAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRNIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLDGKEGAARDIVLLNTAAALYAGNIAASLSDGISAAREGIDSGRAKAKKEEF
                     VGFTRQFA"
     gene            complement(1266..1856)
                     /locus_tag="AABD07_001501"
     CDS             complement(1266..1856)
                     /locus_tag="AABD07_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HFB2356001.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVEAMRHFAGRLPIMGVCLGHQTIGEAFGGDVVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIERGTLPDCLEITAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTERGHDMLNNFLVEFQNFKPQKI"
     gene            2267..4543
                     /locus_tag="AABD07_001502"
     CDS             2267..4543
                     /locus_tag="AABD07_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFB2356002.1"
                     /translation="MAQITLKPIVLSILLINTPLLAQAHETEQSVGLETVSVVGKSRP
                     RATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGAAYSDRRDRYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDGDGAHAHTHNGKPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSAIPETVQQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNQPLPDLGAHRQTARSFALSGNWYFTPHHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLAAYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDPYGKRPFIAQDDQNAPRIPAARLGFHLKTSLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            complement(5083..5862)
                     /locus_tag="AABD07_001503"
     CDS             complement(5083..5862)
                     /locus_tag="AABD07_001503"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HFB2356003.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVKTVLARLPLTDS
                     QADPVSQAASVETAANPSAEQQQIEAAAAKIQAAVQDVLKD"
     gene            6016..8865
                     /gene="uvrA"
                     /locus_tag="AABD07_001504"
     CDS             6016..8865
                     /gene="uvrA"
                     /locus_tag="AABD07_001504"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HFB2356004.1"
                     /translation="MCNHHPRHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILGPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLA
                     HHYKFDVNVAWETLPEKVKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVGGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCEKSVTGQYLGGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDGGGKVIAKGSPEEVAKVKGSYTGKYLKVVLK"
     gene            8955..9524
                     /locus_tag="AABD07_001505"
     CDS             8955..9524
                     /locus_tag="AABD07_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco29kI family restriction endonuclease"
                     /protein_id="HFB2356005.1"
                     /translation="MRFFHGTPVHTLPPPKQFKGAGVYAIYYIGNNPLYKQYADWNRL
                     SYNAPIYVGKAVPKGWRQARNSDNALNQSTELFHRLKEHSRSIAAVSDLDPSDFMCRF
                     VIFEGAGSDMIGTIEAALIKLHKPLWNSCVDGFGNHDPGKGRYEQAKSDWDVLHSGRV
                     WADRLNGIPNSYESILENINTHLEIIKRK"
     gene            9528..10661
                     /gene="dcm"
                     /locus_tag="AABD07_001506"
     CDS             9528..10661
                     /gene="dcm"
                     /locus_tag="AABD07_001506"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HFB2356006.1"
                     /translation="MKSLEIFSGAGGLAKGLELAGFQHASFIELNKDACNSLRSNFNP
                     KLVYQGDVADFDLSSQEGIEVIAGGPPCQPFSLGGKHLAHEDRRDMFPHAVRYVEYYR
                     PKAFIFENVKGLLRKSFADYFEYILLRLTYPNLGILQNEDWKGHLTRLKEIEFNLYKG
                     IKYKVSYQLLNAADYGVPQKRERVVIVGIRADLDIDWKFPKRTHSEDRLNWEKYVTGE
                     YWEKHNEPKRFNKDIAEKLQKKYGIFEPEKKPWQTVRDTLSDIPHPLGNHKITGHEYR
                     DGARIYPGHTGSGIDEPSKTIKAGGHGVPGGENMIRYDDGTVRYFTSYEAKLLQTFPE
                     EFVISGAWGEAMRQIGNAVPVKLSEILGKHLMGVLSEKSSLHN"
     gene            10969..>11130
                     /locus_tag="AABD07_001507"
     CDS             10969..>11130
                     /locus_tag="AABD07_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFB2356007.1"
                     /translation="MDVQKQYPFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPHTKN"
BASE COUNT         2936 a         3111 c         2598 g         2485 t
ORIGIN      
        1 attaagggga tattcgggta aaattaggag gtatttgggg cgaaaacagc cgaaaacctg
       61 tgtttgggtt tcggatgtcg aaggaagggc ttttttgcaa aggcctcatg ccgtctgaaa
      121 cgccaattcc gccgttcaga cggcatttgt tgctttatat caagtttgcc ggcttaggcg
      181 aattgccgtg taaaaccgac aaactcctct tttttcgcct tcgccctacc tgaatcgatg
      241 ccttcccgtg cggcagatat gccgtctgaa agcgaagcag cgatatttcc ggcatataag
      301 gcggcggcgg tattaagcaa tacgatatcg cgcgccgccc cttctttccc gtccagtacc
      361 tcgttcattt tcaacaaaga ttcctgagta ttggcaactt tgatttcatc caaattgcgg
      421 cgggtttcga taccgaaatc ttctgggcgg atgtcgtatt cgctgatttt tccgtctttg
      481 agttcggcaa cgcgcgtttt gcccgtcagt gtaatttcat ccaaaccgcc ctccccgcaa
      541 acgaccaaaa cgtgttttga gccgagttgt tgcaagaccc gcgacaaaat gccgcacaaa
      601 tcggtgtgga acacgcccaa aagctggttc ggcgcgcccg caggattggt taacggaccc
      661 aatatgttga aaatgtttcg gaaaccgagc gaacggcgca ccggggcgac atggcgcatg
      721 gcactgtggt gattgggtgc gaacataaac cctataccgg tctgcctgat actttgggca
      781 atctgttcgg gagtcaggtt gaggtttgcg cccatttgct ccatcacgtc agccgcaccg
      841 ctggaggaag agaccgaccg gcctccgtgt ttggcaacct ttgcgcctgc cgctgcagca
      901 acaaacatcg aagtcgtcga aatattgaag gttttcgcgc catccccgcc cgtaccgacg
      961 atatcgacca gcccgtccgc atcctccagc ggcacttttg acgcaaactc gcacatcacg
     1021 gcggcggcgg cggtgatttc ggaaacggtt tcaaccttga tacgcaagcc ggtcaaaatc
     1081 gccgcaattt gttcgggcgg cacttttccg ctcatcattt ggcgcatcaa gtcggtcatt
     1141 tcatcgtaaa acaactcgtt attgctgatt aatcgttcga tagcctgttg cggtgtaatc
     1201 attttttgtc ctccgttcaa tattcggacg aaaatgccgc ccgaagggct tcagacggca
     1261 tcacgtcaga ttttttgcgg tttgaagttt tgaaattcaa ctaaaaaatt gttcaacata
     1321 tcatgtccgc gttcggtcaa gagggcttcg gggtggaact gcacgccctc gacggcatat
     1381 tccttatggc gcacgcccat aatttcgccg tcttccgtcc acgccgtgat ttccaagcaa
     1441 tccggcagcg tgccgcgttc gataacgagg ctgtgataac gcgtacaggt aaccggattg
     1501 ggcaaaccct taaacatacc cttgcccgaa tgggacacgg gcgacacctt accgtgcatc
     1561 aaggtttttg cccgtaccac atctccaccg aacgcttcgc ctatcgtctg atgcccgagg
     1621 cacacgccca taatcggcag ccggccggca aaatggcgca tggcttctac tgaaataccc
     1681 gcctccttag gggaacacgg tccgggaccg ataacgagat attgcggatt caatgcctcg
     1741 atttcctcca acgtaatatc atcgttgcgg cgcacggcga cttcctgccc caattctgcg
     1801 aaatactgga cgatgttgta agtaaaactg tcgtaattgt cgataaacaa aagcattttg
     1861 tgattaacct attgatttat aatttgttta ttattaactg catttccgat acccccatcc
     1921 ataccccctt atatcttagc gtgcccgatg cgccctcgtg aatctggcgc agagcctcgc
     1981 gttctgacaa gtacgccatt ttgccacctt ttcgaccgtt cgggaacgta ccgtttttat
     2041 gccctcataa attttggtta tccgatagct aacatatagc ggcgttcgtg ttcacatcat
     2101 taacttccct aaaattaggg ttaatacaaa ttaacgccat taaatatcac aaccgtgtca
     2161 tttgaaaaac ttttgcctat gccctctgag tattctcaaa atcttatgat ataaaaaatg
     2221 caatgttata taataacaaa cttttgaaat gcgacgagaa gccaaaatgg cacaaatcac
     2281 actcaaaccc attgttttat caattctttt aatcaacaca cccctcctcg cccaagcgca
     2341 tgaaactgag caatcggtgg gcttggaaac ggtcagcgtc gtcggcaaaa gccgtccgcg
     2401 cgcgacttcg gggctgctgc acacttcgac cgcctccgac aaaatcatct ccggcgatac
     2461 tttgcgccaa aaagccgtca acttgggcga cgctttggac ggcgtaccgg gcattcatgc
     2521 ctcgcaatac ggcggcggcg catccgctcc cgttattcgc ggtcaaacgg gcagacggat
     2581 taaagtattg aaccatcacg gcgaaacggg cgatatggcg gacttttctc ccgatcacgc
     2641 cattatggta gataccgcct tgtcgcaaca ggttgaaatc ctgcgcgggc cggttacgct
     2701 cttgtacagc tcgggcaatg tggcggggct ggtcgatgtt gccgatggaa aaatccccga
     2761 aaaaatgcct gaaaacggcg tatcgggcga agccggattg cgtttgagca gcggcaattt
     2821 agaaaaactg acatccgcag gcatcaatat cggactgggc aaaaacttcg tgctgcatac
     2881 cgaaggcttg taccgcaaat cgggcgatta cgccgtaccg cgttaccgca atctgaaacg
     2941 cctgcccgac agccatgccg attcgcaaac gggcagcatc gggctgtctt gggtaggcga
     3001 aaaaggcttt atcggcgcag catacagcga ccgtcgcgac cgctacggcc tgcctgccca
     3061 cagccacgaa tacgatgatt gccacgccga catcatctgg caaaagagtt tgatcaacaa
     3121 acgctatttg cagctttatc cgcacttgtt gaccgaagaa gacatcgatt acgacaatcc
     3181 gggcttgagc tgcggcttcc acgacggcga cggtgcacac gcacacaccc acaacggcaa
     3241 accgtggata gacctgcgca acaaacgcta cgaactccgc gccgaatgga agcagccatt
     3301 ccccggtttt gaagccctgc gcgtacatct gaaccgcaat gactaccacc acgacgaaaa
     3361 agcaggcgat gcagtagaaa acttcttcaa caacaaaaca cacaacgccc gtatcgagtt
     3421 gcgccaccaa cccataggcc gtctgaaagg cagctggggc gtgcaatatt tgggacaaaa
     3481 atccagcgcg ctttccgcca ttcccgaaac cgtccaacaa ccgatgttga ttgacaacaa
     3541 tgtccgccat tacagctttt tcggtgtaga acaggcaaat tgggacaact tcacgcttga
     3601 aggcggcgta cgcgtggaaa aacaaaaagc ctccatccgg tacgacaaag cattgattga
     3661 tcgagaaaac tactacaacc agcccctgcc cgacctcggc gcgcaccgcc aaaccgcccg
     3721 ctcgttcgca ctttcgggca actggtattt cacgccacac cacaaactca gcctgaccgc
     3781 ctcccatcag gaacgcctgc cgtcaacgca agaactgtac gcacacggca agcacgtcgc
     3841 caccaacacc tttgaagtcg gcaacaaaca cctcaacaaa gagcgttcca acaatatcga
     3901 actcgcgctg ggctacgaag gcgaccgctg gcaatacaat ctggcagcct accgcaaccg
     3961 attcggcaac tacatttacg cccaaacctt aaacgacgga cgcggcccca aatccatcga
     4021 agacgacagc gaaatgaagc tcgtgcgcta caaccaatcc ggtgccgact tctacggcgc
     4081 ggaaggcgaa atctacttca aaccgacacc gcgctaccgc atcggcgttt ccggcgacta
     4141 tgtacgaggc cgtctgaaaa acctgccgtc cctacccggc agggaagatc cctacggcaa
     4201 acgtcccttc atcgcgcagg acgaccaaaa cgccccccgc attccggctg cgcgcctcgg
     4261 cttccacctg aaaacctcgc taaccgaccg tatcgatgcc aatttggact actaccgcgt
     4321 gttcgcccaa aacaaactcg cccgctacga aacgcgtacg cccggacacc atatgctcaa
     4381 cctcggtgca aactaccgcc gcaatacgcg ctatggcgag tggaattggt acgtcaaagc
     4441 cgacaacctg ctcaaccaat ccgtttacgc ccacagcagc ttcctctctg atacgccgca
     4501 aatgggccgc agctttaccg gcggcgtaaa cgtgaagttt taaaatcgga caggcaaaca
     4561 aaaaaggttt tcagacggca ttctgaaaac ctttttttct ttttaatcaa cttgttagga
     4621 aatatggcaa agacaaggaa caaaccactg tgccatcatt cccattttct ttgtttcatc
     4681 attcttgctt tcacgccgtc attctcgcaa aagcagaaaa atcaaaagca aaaacccaag
     4741 atcccatcat tcctgcgcag gcgggaatcc aattcattcg gtttcagccg tttccgataa
     4801 attaccgtaa cgttaagttc ccggattccc actttcgtgg gaatgacggc gtaaaggttt
     4861 ctgtttttta agttttaggt aactaatgag tcgtcattcc cgcgcaggcg ggaatccaat
     4921 tcgttcggtt tctgttattt ctgataaatc accgtaacgt taagttcccg gattcccatt
     4981 ttcgtgaaca taacggtgtg aacattagca aaaattcaaa aaaccaaact tcctcattcg
     5041 tgtgaatgat ggtactgata ttttctattt cagttcgcaa aattaatctt tcaacacatc
     5101 ttgcacagcc gcctgaatct tagccgccgc cgcttcgatt tgctgctgtt cggcagatgg
     5161 gtttgccgct gtttcaaccg aagcagcttg tgaaacagga tcggcttgag aatcagtcag
     5221 cggcaaacgc gccaatacgg tttttacgcc ggttacttta tcaccaatcg ccacttgcgc
     5281 ctgcgcatcg acaggcagat acatatccac gcgcgaaccg aagcggataa agccatagcg
     5341 ttcgccgcgg gacagtttcg cacctgcttg ggtgtaacac aaaatacggc gtgccaccag
     5401 accggccact tgaacaaaag taatttcacg accggaagcc gtagtcgcca aaaccgcgtt
     5461 gcgttcgttt tccgtgctgg ctttgtccaa atccgcattc acgaatttgc ctttgttata
     5521 gaccactttc gttaccgtac aatcggcagg cgatttttgc gaatgcacgt tgaacacgtt
     5581 cataaaaata ctgattttca aagcatcgac atcacgatac ggatcgcgtg cgcgctcgac
     5641 caccacgata cggccgtcaa ccggactcaa caccgcttca ggattttgcg gaatttcacg
     5701 cgcagggtcg cggaaaaact gcaatgcaaa tacggtaaac acccaaaacg gcaaagacca
     5761 ccagccgcag cacatcgaca ccagcaggct caaagccaaa ccgccgccga taatcggcca
     5821 gccctcacgg gcgataatcg ggtggggata aagacggttc atttgtcatc cttttattca
     5881 aatatattaa atagcgacat tataacggaa tccgccgcgt tccgccgaca aatgccgtct
     5941 gaacgcggct tcagacggca tccgagaaag tgctacaata tcggttttcc tttatttttt
     6001 caggcggcat ccattatgtg caaccatcat ccccgacatt cgcacgacaa cgacaccatc
     6061 cgcattcgcg gcgcgcgcac gcataatttg aaaaacatcg atttggacat tccccgccac
     6121 aagctcgtgg tggtaacagg attgtcaggc agcggcaaat catcgctggc gtttgatact
     6181 ttatatgccg aagggcagcg gcgttatgtc gagagcctgt ctgcctatgc gcggcagttt
     6241 ttgcagatga tggacaaacc cgatgtcgat ttgattgaag gcctgtcgcc tgcgatttcc
     6301 atcgagcaga aatccaccag ccacaatccg cgttccaccg tcggcacggt aacggaaatc
     6361 cacgactacc tgcgcctttt atacgcccgt gtcggcacgc cgtattgccc cgaacacaag
     6421 ctgccgctat ccagccaaac cgtatctcaa atggtcgatg ccgtattaaa actgccggaa
     6481 gatacgcgcg tgatgattct ggggccggcg gtgcgcgagc gtaaaggcga atttgtcgat
     6541 ttctttgccg acttgcaggc gcaaggcttt gcccgtgtgc gcgtggacgg cgaagtctat
     6601 cagcttgacg aagtaccgaa gctggaaaaa aacatcaaac acaatatcga cgtcgtcatc
     6661 gaccgcgtga aagtgaaagc cgacatcaaa caacgactgg cggaaagttt tgaaaccgcg
     6721 ctgcgccacg gcaacgagcg cgcgctggcg atggaaatgg acagcggcga agaacattgg
     6781 ttttccgcgc gttttgcctg ccccgtgtgt tcgtacagcc tgcccgaatt ggaaccgcgc
     6841 ctcttttcgt tcaacaaccc gatgggttcc tgcccgactt gcgacggctt gggcaacacc
     6901 aatttcttcg accccgaaaa agtagtcgcc catcccgaat tgtcgctggc aaccggcgcg
     6961 attgacggtt gggacaaacg caaccaattc tatttccaaa tgattcaatc gctggcgcat
     7021 cattataaat ttgatgtcaa cgtcgcttgg gaaactttgc ctgaaaaagt caaaaaagtc
     7081 gtgttgcacg gctcgggcaa agaagtcatt gatttcacct acctgtccga acgcggcacc
     7141 accttcaacc gcagccacgc cttcgagggc atcatcccca atctcgaacg ccgctaccgc
     7201 gaaaccgaca gcgaaaccgt gcgcgaaaaa ctgcgcgagt accaaaatca ccgtgcctgc
     7261 ccgagctgcg gcggcgcacg tttgcgcaaa gaagcacgct acgtttacgt cggcggcgaa
     7321 ccgttgcacg aagtctccgc ctggccgctg accaaaaccc accgattctt cgaaacgctg
     7381 gatttggacg gcaacaaaaa acagatcgcc gaaaaaatcc tcaaagaaat caccgagcgg
     7441 ctcggcttct tgattaacgt cgggctggat tacctgaatt taagccgttc cgccgaaacc
     7501 ctttccggcg gcgaagccca gcgcatccgc ctcgccagcc aaatcggcag cggcctgacc
     7561 ggcgtgatgt acgttttgga cgaaccctcc atcggcctgc accagcgcga caacgaccgc
     7621 ctgctcgcca ccctcaaacg cctgcgcgat ttgggcaaca gcgtaattgt ggtcgaacac
     7681 gacgaagacg ccatccgcga agccgatttc gtcgtcgata tgggccccgg cgcgggcgaa
     7741 cacggcggca acgtactgat tgccgacacg cccgaaaatg tcgccaaatg cgaaaaatcc
     7801 gttaccggac aatacctcgg cggcaaaaaa tccattgccg tgccgtctga acgcacgccc
     7861 gtcaatcccg accgaatgct cgtcctcaaa ggtgcgcgcg gcaacaacct caaaaacgtc
     7921 accctcgagt tgccgctcgg tttgattacc tgcatcaccg gcgtatccgg cagcggcaaa
     7981 tccaccctga ttaacgacac cctcgccaaa atcaccgccc gcgaactcaa ccgcgcccaa
     8041 gaagaacccg ccccatacga cgacatccgc ggcctcgaac acctcgacaa agtcatcaac
     8101 gtcgaccaat cccccatcgg ccgcaccccg cgctccaacc ccgccaccta caccggcctg
     8161 tttaccccca tccgcgaact cttcgccggc gtacccctct cgcgcgaacg cggctacaac
     8221 gtcggcagat tctccttcaa cgtcaaaggc ggccgctgcg aagcctgcca aggcgacggc
     8281 gtaatcaaag tcgaaatgca cttcctgccc gacgtgtacg tcccctgcga agtctgccac
     8341 ggcaaacgct acaaccgcga aaccctcgaa atccaataca aaggcaaaaa catcagccaa
     8401 gtcctcgaca tgacggtcga agaagcccgc gaatttttcg acgccgtccc caccgtatcg
     8461 cgcaaactgc aaaccctgat ggacgtaggt ctcggctaca tccgcctcgg ccaatccgcc
     8521 accaccctct ccggcggcga agcccagcgc gtcaaactcg ccttggaact ctccaaacgc
     8581 gacaccggca gaacgctcta catcctcgac gaacccacca ccggcctgca cttcgccgac
     8641 atcgccctgc tgctggaagt cataggccgt ctgaaaggca aaggcaactc gattgtgatt
     8701 atcgagcata atctggatgt aattaaaacc gcggattgga ttgtggactt agggccggaa
     8761 ggcggcgatg gtgggggtaa ggttatcgcg aaaggtagcc ctgaggaagt ggcgaaggtt
     8821 aaggggagtt ataccgggaa gtatttgaaa gtggttttga agtaaacgaa cggatataga
     8881 aaatgaacaa taattttgac cgcagcaagc atatctatca taacgaagct tttgtagaac
     8941 tggttaaaga tgccatacgc ttttttcatg gtacgcctgt tcatacactt cctccaccca
     9001 aacagttcaa aggtgcaggg gtttatgcga tttactatat cggtaacaat cctttgtaca
     9061 aacaatatgc ggactggaac agattatcct acaatgcgcc aatttatgtt ggcaaggccg
     9121 tccccaaagg ctggcggcaa gcaagaaatt ctgataatgc gctaaaccaa tcaaccgaac
     9181 tgttccaccg gttgaaagaa cacagcagga gtattgccgc tgtttctgat ttagatcctt
     9241 ccgatttcat gtgcagattc gttatctttg aaggtgccgg ttctgacatg ataggcacaa
     9301 tcgaagctgc cctgattaaa ttacacaaac ctctatggaa ctcttgtgtc gatggtttcg
     9361 gaaaccacga ccccggaaaa ggccgttacg aacaagccaa atcggattgg gatgtccttc
     9421 atagcgggcg ggtttgggca gataggctaa acggcatacc gaatagctat gagtccatac
     9481 ttgaaaatat caacacacat ttagagataa taaagagaaa ataacctatg aagtctttgg
     9541 aaattttttc cggcgcgggc gggttggcaa aaggccttga acttgcagga ttccaacatg
     9601 catcttttat tgaactcaat aaagatgcat gcaattcttt aagaagcaac tttaacccca
     9661 agcttgttta tcagggagat gtggcagatt ttgatctttc cagtcaagaa ggcatagaag
     9721 tcattgcagg cggtcctcct tgccagccct tttcattggg cgggaaacac cttgcccatg
     9781 aagacagaag ggatatgttt cctcatgcgg tcagatatgt ggagtattac cgccccaaag
     9841 cttttatctt tgagaatgta aaaggacttt taagaaaatc attcgctgat tattttgaat
     9901 atatcctact tcggcttact tatccgaatc ttggtatttt gcagaatgaa gattggaaag
     9961 gccatctgac acggctgaaa gaaattgaat tcaatttata taaaggaatc aaatataagg
    10021 tttcatatca attgttgaat gcagctgatt acggagtgcc gcaaaaacgc gaacgcgtgg
    10081 ttatcgtagg tatccgggcc gatttggata ttgattggaa attcccaaaa agaacacatt
    10141 ccgaagacag gttgaattgg gaaaagtatg taacggggga atactgggaa aaacacaacg
    10201 aacccaaaag attcaataaa gatattgctg aaaagttaca aaaaaaatac ggtatattcg
    10261 aaccagaaaa aaaaccttgg caaacggtaa gggatacctt gtccgacatc ccgcatcctt
    10321 tggggaatca taaaattaca ggacatgaat atagggatgg cgcaagaatt tatcccggac
    10381 acacaggaag cgggatagac gaaccgtcca aaaccattaa agcaggtggg catggcgttc
    10441 ccggcggaga aaatatgatt cgttatgatg atggaacagt cagatacttt accagctatg
    10501 aagcaaaact tcttcaaaca ttccctgaag aatttgtcat ttctggagct tggggagaag
    10561 caatgcgaca aattggcaat gcggttcctg tcaaattgtc ggaaatttta ggcaaacatc
    10621 tgatgggggt gttgtcggag aaaagcagcc tgcacaacta acccgcccac tgcgtgtgtg
    10681 cggtacgcac gcggttgctt gattgacggt ttgccgtttc aacttttaac ttcgttgaag
    10741 ctagtgcttt cagacggcct ccaatgtcgt ttggaaacat caggtccaac aaagttaaac
    10801 cttaaacaac aaaccattcc ttctccaaca cccaaaccac aaacaaaaat cctatggcgc
    10861 gttatcgcag aaacttcatt gccggcggca cattcttttt caccgtcaaa cccgccgccc
    10921 cgaaatcgcg tctgcttgtc ggacatatcg gcttcgcgtg cggcttatat ggatgtgcaa
    10981 aaacaatatc cctttgaaac cgtcgccgta tgcgtgctgc cgaaccatat tcacgccatt
    11041 tggacgctgc cgcccgacga tgcggattat tccctactcc ggcggctgat taaaaccaaa
    11101 ttctccgcat attcccctca tactaaaaac
//
LOCUS       DAWXHA010000076        10783 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.076, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000076 DAWXHA010000000
VERSION     DAWXHA010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10783
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.076"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            230..442
                     /locus_tag="AABD07_001508"
     CDS             230..442
                     /locus_tag="AABD07_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356008.1"
                     /translation="MKNEIQKIMDKYDPWHEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENIHAMIGEIKNAI"
     gene            complement(535..1167)
                     /gene="mtrR"
                     /locus_tag="AABD07_001509"
     CDS             complement(535..1167)
                     /gene="mtrR"
                     /locus_tag="AABD07_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HFB2356009.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAADAEGGSWTVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSGESFDLGKTAPRIIGIMMDNLENHPCLRRK"
     gene            1417..2655
                     /gene="mtrC"
                     /locus_tag="AABD07_001510"
     CDS             1417..2655
                     /gene="mtrC"
                     /locus_tag="AABD07_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HFB2356010.1"
                     /translation="MAFYASKAMRAAALAAAVALALSSCGKGRDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVSADAISKQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGAIAVGIKFDDGTVYPEKGRLLFADPTVDE
                     STGQITLRAAVSNDQNILMPGLYVRVLMDQVAADNAFIVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGMTGAKKVTPKEWAPSENQA
                     AAPQAGVQTASEAKPASEAK"
     gene            2667..5870
                     /gene="mtrD"
                     /locus_tag="AABD07_001511"
     CDS             2667..5870
                     /gene="mtrD"
                     /locus_tag="AABD07_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HFB2356011.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHAIYPGASAQVMEGSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNV
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADVGSALSAQNIQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNIYLKDVAKVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERLAVLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMTLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGAAGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFDSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATKERTDATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTASGSDAVAVAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAAGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVRHASKAGITGSDDKQY"
     gene            5923..7326
                     /gene="mtrE"
                     /locus_tag="AABD07_001512"
     CDS             5923..7326
                     /gene="mtrE"
                     /locus_tag="AABD07_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HFB2356012.1"
                     /translation="MNTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFQNDTSV
                     SSIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSSSEAALQGYFASVANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINRPIPEDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVGTGSVELGGLFKSGTGVWA
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERISYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTGK"
     gene            complement(7527..7682)
                     /locus_tag="AABD07_001513"
     CDS             complement(7527..7682)
                     /locus_tag="AABD07_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tonB dependent receptor family protein"
                     /protein_id="HFB2356013.1"
                     /translation="MDLTAHYKIGKSTRIGLDFENVFNKRCRTMPDIHVYGTPRSLTA
                     TVKHIVD"
     gene            complement(7704..8003)
                     /locus_tag="AABD07_001514"
     CDS             complement(7704..8003)
                     /locus_tag="AABD07_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate permease"
                     /protein_id="HFB2356014.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFFFAALTVLKLKGYQAGLYTLLIALAVAVFGFGMPTGMAVSSLSPQPD"
     gene            8281..9060
                     /locus_tag="AABD07_001515"
     CDS             8281..9060
                     /locus_tag="AABD07_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HFB2356015.1"
                     /translation="MKLVRPQKISDQVLSVLEGRIVEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNILVARQILEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIRFWLEKFEEACGSGNLEHQGEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSILKDREYQSRNRHADTLAQNDLKRVQDWEV"
     gene            complement(9299..10633)
                     /gene="gdhA"
                     /locus_tag="AABD07_001516"
     CDS             complement(9299..10633)
                     /gene="gdhA"
                     /locus_tag="AABD07_001516"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HFB2356016.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFTSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSDGFVLFPDIGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDSRLFGIMQSIHESCLKYGKVGDKVNYVNGANIAGFVKVADAMLAQGF"
BASE COUNT         2451 a         2664 c         3042 g         2626 t
ORIGIN      
        1 atagattaaa acggaaaatg cccacatcgt tattctcata aaggcggtaa tccgaaaact
       61 tgacgttaaa gccttatcag gaatgactgg aactcaaaaa aacgaattcc cgcctgcgcg
      121 ggaatgacgg gattttcggt ttttgtttgc aagaatgccg gagaaaaatg cagtttacat
      181 tcgaatggta ttgttattaa ttgtaaataa atattggaag gtaaatgata tgaaaaatga
      241 aattcaaaaa atcatggata aatatgatcc atggcatgaa gatgattttg agtcgtatga
      301 agacattgcc aaagatgtat cgttgatgac agataaaacg ttcattgaac attatttgtt
      361 agaagtttat tcagaagaaa acggacattt tgaccaagag aatatccatg cgatgatagg
      421 ggaaattaaa aatgcaattt agtgaatatg tatttttaga agaatgcttt gtgtcatttt
      481 gatgccgttt gaaagggttt gttcgtttca gacggcattg ttaccaaggc ttgattattt
      541 ccggcgcagg cagggatggt tttccaagtt gtccatcatt atcccgatga tgcgcggggc
      601 ggttttgccc aaatcgaaac tttcgccgga agagaaccaa cgccaaatca gcccgtccaa
      661 cgtcgatttg atgaagatga ccgccgtttc cttgtccaaa tcgtcagcca aatcctgatt
      721 ttccaccgct tcggtcaaaa cggcggtaat tttctcgcgc cagattgcct gatgcttgcg
      781 ggcaatggcg ataacggcgg cgttttgctc cgtgtgttcg cattttaaaa acaggatgtt
      841 gtggaatttg tagtagatgt cgttgctttg cagccgctcg aaaaagtgca gcagcgtgtg
      901 gcggaatacc gtccaagaac ctccttcggc atctgcggca tcttgcgcga tgcagttttc
      961 gatgtcgtcg cagatacgtt ggaacaacgc gtcaaacaag tcttccttat ttttgaaatg
     1021 ccaatagagc gcgccgcgcg ttacgccggc ggcttgggcg atttcgttga gcgaggtgcg
     1081 ggcaatccct ttgcggtaaa aggtttccaa ggcggcaagc atcaggtgtt ctttggtttt
     1141 caaggcttcg gttttggttt ttctcataat ggcgttttcg tttcgggtcg gtttgacgag
     1201 ggcggattat aaaaaagact tttatccgtg caatcgtgta tgtataatga aacccataaa
     1261 attgagactg catctcaact ttgaaaacag gtataacctg ctttgcaacc cgttcgaaca
     1321 ttcgggtatc aaagcaggcg gtttttatat cctgaaataa gaatgcctgt tgattggcaa
     1381 aaccctttac atcaaaccag acagatagga taaataatgg ctttttatgc ttctaaggcg
     1441 atgcgtgcgg ccgcgttggc tgccgccgtt gcattggcac tgtcgtcttg cggtaaaggc
     1501 agagacgcgg cgcagggcgg gcagcctgcg ggtcgggaag cccccgcgcc cgtcgtcggc
     1561 gtcgtaaccg tccatccgca aaccgtcgca ttgaccgtcg agttgccggg gcgtttggaa
     1621 tcgctgcgta ccgccgatgt ccgcgcccaa gtcggcggca tcatccaaaa acgcctgttc
     1681 caagaaggca gttatgtccg cgccgggcag ccgctgtatc agatcgacag ttccacttat
     1741 gaagcaggtc tggaaagcgc gcgcgcgcaa ctggcaacgg cacaggcaac gcttgccaaa
     1801 gcggatgcgg atttggcgcg ttacaaaccg ctggtttccg ccgatgccat cagtaaacaa
     1861 gagtacgatg ctgcggtaac ggcgaaacgt tctgccgagg cgggcgttaa agcggcgcag
     1921 gcggcgatca aatccgccgg catcaatctg aaccgttcgc gcattaccgc gccgatttcg
     1981 ggctttatcg gtcagtccaa agtttccgaa ggtacgctgt tgaatgcggg cgatacaact
     2041 gttttagcca ccatccgcca aaccaatccg atgtatgtga acgttaccca gtctgcatcc
     2101 gaagtgatga aactgcgccg gcagatagcc gaaggcaagc tgctggcggc ggatggtgcg
     2161 attgcggtcg gcatcaaatt tgacgacggt acggtttatc ctgaaaaagg ccgcctgctg
     2221 tttgctgatc cgaccgttga cgaatcgacc ggtcagatta ccttgcgcgc cgccgtatcg
     2281 aacgatcaga atatcctgat gcccggcctg tatgtgcgtg tgctgatgga tcaggtggcg
     2341 gcggataatg cattcatcgt tccacagcag gcggtaacgc gcggtgcgaa agataccgtg
     2401 atgattgtga atgcccaggg cggtatggaa ccccgcgagg taacggtcgc gcaacagcag
     2461 ggtacgaatt ggattgttac gtcgggtctg aaggacgggg acaaggtggt tgtggaaggc
     2521 atcagtatcg ccggtatgac gggggcgaaa aaggtaacgc ctaaagaatg ggcgccgtct
     2581 gaaaatcaag ctgccgcccc tcaagccggc gttcagacgg catctgaagc caaacctgct
     2641 tctgaagcga aataaggaag gcatcgatgg ctaaattctt tatcgaccgc cccattttcg
     2701 cgtgggttat ttcgattttc attattgcgg caggtatttt cggcattaaa agcctgccgg
     2761 tttcgcaata tccgtccgtt gccgccccga ccattacttt gcacgccatt tatccgggtg
     2821 cgtccgcaca agtgatggaa ggcagcgtac tttccgtgat cgaacggaat atgaacggcg
     2881 tggaaggttt ggactatatg tccacttccg ccgattcgag cggcagcggc agcgtgagcc
     2941 tgacctttac gcccgatacc gacgagaatc tggcgcaggt ggaagtgcag aacaagcttt
     3001 ccgaagtatt gagcacgctg ccggcaaccg tccagcaata cggcgtaacc gtatccaagg
     3061 cgcgttccaa tttcctgatg attgtgatgc tttcgtcgga tgtgcagtca accgaagaga
     3121 tgaacgacta cgcgcagcgc aacgtcgttc ccgaattgca gcgtatcgaa ggcgtggggc
     3181 aggtccgcct gttcggcgcg caacgcgcga tgcggatttg ggtcgatcct aagaaactgc
     3241 aaaactacaa tttgtcgttt gccgatgtcg gcagcgcgtt gtcggcgcag aatatccaaa
     3301 tttccgcagg ttccatcggt tcgcttcccg ctgtgcgcgg acagacggtt acggctaccg
     3361 taacggcgca agggcagttg ggtacggcag aagaattcgg caacgtcatc ctccgcgcca
     3421 ataccgacgg ttctaatatt tacctgaagg atgtggcgaa agtcggattg ggtatggaag
     3481 actattcttc ctcaacccgc ctgaacgggg taaataccac cggtatggcg gtaatgttgt
     3541 ccaacagcgg caatgcgatg gcgacggcaa aggcggtaaa agaacgcttg gcggtgctgg
     3601 aaaaatactt tccgcagggt atgagttgga aaacccctta cgatacttcc aaattcgttg
     3661 aaatttcgat tgaaaaagtg attcacactt taatcgaagc gatggtgctg gtgtttgtcg
     3721 taatgtacct cttcctgcaa aacatccgtt atacgctgat tccgaccatc gtcgtaccga
     3781 tttccctgtt gggcggtttc gccttcatct cttatatggg gatgtcgatt aacgtattga
     3841 cgatgtttgc gatgacattg gtcatcggca tcgtggtcga tgacgcgatt gtggtggttg
     3901 aaaacgtcga gcgcattatg gcgggtgaag gcctgccgcc caaagaagcg accaaaaaag
     3961 cgatgggtca gatttcgggc gcggtcatcg gtattaccgc cgttctgatt tccgtgttcg
     4021 tgcctctggc gatgttcagc ggggcggccg gcaatattta caaacagttt gccctgacga
     4081 tggcgtcatc aatcgcattc tccgccttcc ttgcgctgac ccttacccct gctttgtgtg
     4141 ccacaatgtt gaagacaatc ccgaaagggc atcacgaaga gaaaaaaggt ttcttcggct
     4201 ggttcaacaa gaaattcgac agttggacgc acggctacga aggccgggtt gccaaagtgc
     4261 tgcgtaagac tttccgcatg atggttgtct atatcggctt ggcggttgtg ggcgtgttcc
     4321 tgtttatgcg cctgccgact tcgttcctgc cgaccgaaga ccaaggcttc gttatggtca
     4381 gcgtgcaact gcctgcgggt gcgaccaaag agcgcaccga tgcgacgcta gcacaagtta
     4441 cccaactggc gaaaagcatt cccgaaattg aaaacatcat taccgtttcc ggcttcagct
     4501 tttcgggcag cggtcagaat atggcgatgg gttttgccat attgaaagat tggaacgaac
     4561 gtaccgcctc cggcagcgat gccgttgcgg ttgccggcaa gctgacgggt atgatgatgg
     4621 ggacgcttaa agacggtttc ggcatcgccg tcgtcccgcc tccgattctg gagttgggca
     4681 acggttcggg cctgagcatc aacctgcaag accgcaacaa taccggccat accgcattgc
     4741 tggcgaagcg caacgagctg attcagaaaa tgcgtgccag cggtttgttt gaccccagca
     4801 ccgtccgtgc cggcggtttg gaagactcgc cgcagttgaa aatcgacatc aaccgtgccg
     4861 cagcggcggc gcaaggcatt tcgtttgccg acatccgcac cgcattggca agcgcgctga
     4921 gttcgtctta tgtcagcgac ttcccgaacc aaggccgtct gcaacgcgtg atggtgcagg
     4981 ccgacgagga tgcccgtatg cagcctgccg atattttgaa cctgaccgtg ccgaacaaat
     5041 ccggcgtcgc cgtaccgctt tccaccattg ctactgtttc ttgggaaaac ggtacggaac
     5101 agagcgtacg cttcaacggt tatccctcga tgaagctgtc cgcttcgcct gcaaccggcg
     5161 tttccaccgg gcaggctatg gcggcggttc aaaaaatggt tgacgaattg ggcggcggtt
     5221 acagcttcga atggggcgga cagtcgcgcg aagaggcaaa aggcggctcg caaaccctga
     5281 ttttgtacgg tttggcggtt gcagccgtat ttttggtact tgccgcgctt tatgaaagct
     5341 ggtcgattcc gctggcggtc atccttgtga ttccgttggg tttgatcggt gcggctgcgg
     5401 gcgtaaccgg gcgcaacctg tttgaaggac tgttgggcag cgttccctcg tttgccaacg
     5461 acatctactt ccaagtcggt ttcgttactg tgatgggttt gagtgcgaaa aacgcgattc
     5521 tgattatcga atttgccaaa gaccttcaag cgcaagggaa aagcgcggtc gaagccgctt
     5581 tggaggcagc ccgcctgcgt ttccgtccga ttatcatgac ctcgtttgcc tttattttgg
     5641 gcgtggttcc cctgtatatt gccgctggtg cgagttctgc cagccagcgc gccatcggca
     5701 cgaccgtatt ctgggggatg ctcatcggca cgctcttgtc cgtgttcctt gttccgcttt
     5761 tctatgtggt ggtgcgcaaa ttcttcaaag aaactgcaca cgagcatgaa atggcggtca
     5821 gacatgcatc aaaagcgggt ataaccggtt cggacgataa acaatattaa gcaaaatacc
     5881 gtctgagaac cgccggtttt cagacggcat caggactttt ttatgaatac tacattgaaa
     5941 actaccttga cctctgttgc agcagccttt gcattgtctg cctgcaccat gattcctcaa
     6001 tacgagcagc ccaaagtcga agttgcggaa accttccaaa acgacacatc ggtttcttcc
     6061 atccgcgcgg ttgatttggg ttggcatgac tattttgccg acccgcgcct gcaaaagctg
     6121 atcgacatcg cactcgagcg caataccagt ttgcgtacag ccgtattgaa cagcgaaatc
     6181 taccgcaaac aatacatgat cgagcgcaac aacctcctgc ccacgcttgc cgccaatgcg
     6241 aacggctcgc gccaaggcag cttgagcggc ggcaatgtca gcagcagcta caatgtcgga
     6301 ctgggtgcgg catcttacga actcgatctg ttcgggcgcg tgcgcagcag cagcgaagca
     6361 gcactgcaag gctattttgc cagcgttgcc aaccgcgatg cggcacattt gagcctgatt
     6421 gccaccgttg ccaaagccta tttcaacgag cgttatgccg aagaagcgat gtctttggcg
     6481 cagcgtgtct tgaaaacgcg cgaggaaacc tacaagctgt ccgaattgcg gtacaaggca
     6541 ggcgtgattt ccgccgtcgc cctgcgccag caggaagcct tgattgaatc tgccaaagcc
     6601 gattatgccc atgccgcgcg cagccgcgaa caggcgcgca atgccttggc aaccttgatt
     6661 aaccgtccga tacccgaaga cctgcccgcc ggtttgccgt tggacaagca gttttttgtt
     6721 gaaaaactgc ctgccggttt gagttccgaa gtattgctcg accgtcccga catccgcgcc
     6781 gccgaacacg cgctcaaaca ggcaaacgcc aatatcggtg cggcgcgcgc cgcctttttc
     6841 ccgtccatcc gcctgaccgg aagcgtcggt acgggttctg tcgaattggg cgggctgttc
     6901 aaaagcggca cgggcgtttg ggcgttcgcg ccgtctatta ccctgccgat ttttacttgg
     6961 ggaacgaaca aggcgaacct tgatgtggca aaactgcgcc aacaggcaca aattgttgcc
     7021 tatgaatccg ccgtccaatc cgcctttcaa gacgtggcaa acgcattggc ggcgcgcgag
     7081 cagctggata aagcctatga cgctttaagc aaacaaagcc gcgcctctaa agaagcgttg
     7141 cgcttggtcg gactgcgtta caaacacggc gtatccggcg cgctcgattt gctcgatgcg
     7201 gaacgcatca gctattcggc ggaaggtgcg gctttgtcgg cacaactgac ccgcgccgaa
     7261 aaccttgccg atttgtacaa ggcgctcggc ggcggattga aacgggatac ccaaaccggc
     7321 aaataaccgc ccgggcaaac aaatgccgtc tgaaacgata aggtttcaga cggcatttct
     7381 ttctttatag tggattaaca aaaaccagta cggcgttgcc ccgccttagc tcaaagagaa
     7441 cgattcccta aggcgcccaa gcaccgggcg aaccggttcc gtactatttg tactgtctgc
     7501 ggcccgccgc cttgtcctga tttttgttaa tccactatat gtttgacggt tgcggtcagg
     7561 ctgcgcggcg tgccgtaaac gtgaatgtcg ggcatcgtgc ggcagcgttt gttaaagacg
     7621 ttttcaaagt ccaaaccgat gcgggtggat ttgccgattt tgtaatgcgc ggtcaagtcc
     7681 agtgtagcgt atggggcgtt gggtcaatcc ggctgcggcg acagggaaga aaccgccata
     7741 cccgtcggca tcccgaagcc gaatacggca acggcaagcg caatcagcag cgtataaagc
     7801 cccgcctgat agcctttcag cttcaggacg gtcagcgcgg caaagaaaaa gacgatgggt
     7861 aagagtgcgg cggcggcagt cagatacagg ctgccgccga ttgccgtgta gttttgaacc
     7921 caagtttcca taattgaaca tctccgaaaa tatttttcta atcgtcggca atagtggtca
     7981 aaccaattaa agcaacgttg cattacttta cgaaacttta atattcaggt caatatattt
     8041 ttgggcggtt cggcagattt gaatcggagc tttcatttaa atcccgttaa aacaaatatt
     8101 tgcatgaaca aaaattgtag tttggtgtag ttttttcctg tgtttcgggg gcggtgcgag
     8161 gtaagtgccg ttgacggcgg gaacggcgtg tcattagaat ccgccctgat tggccagtcc
     8221 aatttgatgt ttgatgtatt tcggaagggt tctgcaggga atctttataa aggaggagtg
     8281 atgaaactgg taaggcctca gaaaatcagc gatcaggtat tgtcggtatt ggaaggccgc
     8341 atcgtggaag gggtttacgc ggaagggggc aagattccgc ccgaacgcgt tttggcggaa
     8401 gagttcggcg tttcgcgtcc gtcggtccgg tcggcattga atattttggt tgcccgtcag
     8461 attttggaag cgaggcaggg cgatggttat tatgtttcgg tcaagccgca gcaggatttt
     8521 ttgcaaagtt ggcaggagct tttgggcaaa cattccaatt gggaacagga tgtttttgat
     8581 ttcagctgcc acatcgaggg ctgtatggcg gcattggcgg cagaacgccg gacggatgcc
     8641 gatttgaagc ggattcggtt ttggcttgaa aagtttgagg aagcgtgcgg aagcggcaat
     8701 ctggaacatc agggcgaagc cgatgtcagc ttccatcaga cgattgcgga tgcggcgcac
     8761 aatttgttgt tcagccattt gtcgggcggt ttgttgaaaa tgctgtaccg gcagacgcgc
     8821 agcagcctta tttatctgaa tcaggaagaa gatccgcgtc cgaaactgat ggcgcagcac
     8881 cgcgtgctgt atgaggcgat atcgaaccgc cggccgggcg aggcttcgga ggcggcaaag
     8941 gctcatttga attatgtggc gagcagcata ttgaaagaca gggaatatca gagccgtaac
     9001 cgccacgcgg atactttggc gcaaaacgat ttgaagcgcg tgcaggattg ggaggtatga
     9061 ataccgttca gacggtctgg catattcgga tgtatcggta tagtgaacta aatttaaacc
     9121 agtacggcgt tgcctcgcct tgccgtacta tttgtactgt ctgcggctcg ccgccttgtc
     9181 ctgatttaaa tttaattcac tatagtatta cccgattcga acgggcggat aatgaaatgc
     9241 cgtctgaaca gcatttgcgg ttcggacggc attttgtttg cggggcggag gcgtttgctt
     9301 agaagccttg cgccagcatc gcatcggcaa ctttgacgaa gccggcgatg ttcgcaccgt
     9361 tgacgtagtt cactttgtcg ccgactttgc cgtatttcag gcaggactcg tggatgcttt
     9421 gcatgatgcc gaacagtcgg ctgtccactt cttcgcgcgt ccaagacagg cggatggcgt
     9481 tttggctcat ttccaagccc gaagttgcca cgccgccggc gttggaggct ttgcccggag
     9541 cgtagaggat gccggctttg ataaattgct cgaccgcgcc caaagtcgac ggcatattcg
     9601 cgccttcggc aacgacgtag cagccgtttg ccaacagggt tttggcggct tcttcgtcca
     9661 attcgttctg ggtcgcgcag ggcagggcga tttcggcggc aacgccccac ggtttttggt
     9721 tttcaaagta ttgcaaacct tgctctttgg cgtaggtggc aacgcgttcg cggcggactt
     9781 ctttcaattc gatcaaggcg gcgagttgcg cttcggtcat accgatgtcg gggaagagga
     9841 cgaagccgtc ggagtcggag acggtcagca ctttcgcacc cagttggatg gctttttcag
     9901 cggcgtattg cgccacgttg ccggaaccgg aaatcagaac gcgtttgcct tcaaaactat
     9961 cgttgcgggt ttgcagcatc gcttgggcga aatagacgca gccgtagccg gtcgcctcgg
    10021 ggcggatgag gctgccaccc cattccaaac ctttgccggt caggacggaa gtgaattcat
    10081 tgcggatttt tttgtattgt ccgaacaggt agccgatttc gcgtccgcct acgccgatgt
    10141 cgccggccgg aacatcggtg tccgcgccga tgtggcggta gagttcggtc ataaaggctt
    10201 ggcagaagcg cattacttcg gcatcggatt tgcctttggg gtcgaagtcg gaaccgcctt
    10261 tgccgccgcc cataggcagg gtggtcaagg cgtttttgaa cacttgttca aaagcgagga
    10321 atttcaacac gcccaaatcg acggtcgggt ggaagcgcag gccgcctttg taagggccga
    10381 tggcggaact catttgcacg cggtagccgc ggttgacttg gacttgtcct ttgtcgtcct
    10441 gccaggttac gcggaacatc acgacgcgtt cgggttcgac gatgcgttcc agcaggcttt
    10501 gctgggtgta tttcggattt tttgccaaaa acggatcaag gctcatgaag acttcttcaa
    10561 ccgcctgatg gaacggctcc tgattggggt tgcgttgttt gaggttggca aacagggtgt
    10621 tcaggtcagt cattcggata ctccttttgg ttgatattgt actaatggga aaacaaattt
    10681 gtagttggca atataaacct atttttttct gatgccaagc ctaattttgc acaaattgtt
    10741 gacattattt ttcccatatt ttcgatatat gatgtttatt gcc
//
LOCUS       DAWXHA010000077        10524 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.077, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000077 DAWXHA010000000
VERSION     DAWXHA010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10524
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.077"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..410)
                     /locus_tag="AABD07_001517"
     CDS             complement(<1..410)
                     /locus_tag="AABD07_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356017.1"
                     /translation="MKTGIQTELAQALLSHEKIWANEEKTILAKNILLDLVEKTDPSI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDFRFFLDKHSINNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRN"
     gene            complement(628..1548)
                     /gene="truB"
                     /locus_tag="AABD07_001518"
     CDS             complement(628..1548)
                     /gene="truB"
                     /locus_tag="AABD07_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HFB2356018.1"
                     /translation="MTNKPAKRPVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHTG
                     VLDPLATGLLPVCFGEAAKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIAAARADI
                     SLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITVYSIDIA
                     EFDAPKAVISVRCSKGTYIRTLSEGIAKHIGTFAHLTALRRTETAGFTIAQSHTLEAL
                     ANLNETERDGLLLPCDVLVSHFPQTVLNDYAVHMLQCGQRPRFEEDLPSDTPVRVYTE
                     NGRFVGLAEYQKEICRMKALRLMNTAASSA"
     gene            complement(1606..2130)
                     /locus_tag="AABD07_001519"
                     /pseudo
     CDS             complement(1606..2130)
                     /locus_tag="AABD07_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237089.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2141..2512)
                     /gene="rbfA"
                     /locus_tag="AABD07_001520"
     CDS             complement(2141..2512)
                     /gene="rbfA"
                     /locus_tag="AABD07_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HFB2356019.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITINEVE
                     VTRDYSHATVFYTVLNQDTREITEEVLEHARGHLRSELSKRIKLFKIPELHFKYDESL
                     ERGMSLSALIDQVAAEKPVED"
     gene            2695..3939
                     /gene="clpX"
                     /locus_tag="AABD07_001521"
     CDS             2695..3939
                     /gene="clpX"
                     /locus_tag="AABD07_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HFB2356020.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCLEILYEG
                     DNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYKRLRHP
                     KADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            complement(4046..5239)
                     /locus_tag="AABD07_001522"
     CDS             complement(4046..5239)
                     /locus_tag="AABD07_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HFB2356021.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVKHSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQAARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLHNVRSQGQKLQTALLDLGRKTGLFSQVRGMGLLLGCAL
                     DTPYRGRSSEIAATSLKHGVMILVAGADVLRFAPSLLLNDEDIAEGLRRLEHVLTEFA
                     AANRP"
     gene            complement(5338..5547)
                     /locus_tag="AABD07_001523"
     CDS             complement(5338..5547)
                     /locus_tag="AABD07_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356022.1"
                     /translation="MGWISSKRKKAPHVCVVPIAVSGCKRFALHDEMPSEDKNIGEIL
                     NQNAAAPQALYRNFFVFFSYPVENI"
     gene            5644..6144
                     /locus_tag="AABD07_001524"
     CDS             5644..6144
                     /locus_tag="AABD07_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356023.1"
                     /translation="MDAMPQTAVQNENLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANKRACRFAEKHRLFFTPAQAELSLNKHKNRRLLTIETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            6229..6783
                     /locus_tag="AABD07_001525"
     CDS             6229..6783
                     /locus_tag="AABD07_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356024.1"
                     /translation="MKKIIASALIATFALTACQDDTQARLERQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAQAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLIGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPVNYRRPAMRGFGRRR"
     gene            6797..6997
                     /locus_tag="AABD07_001526"
     CDS             6797..6997
                     /locus_tag="AABD07_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356025.1"
                     /translation="MPSEGLSDGIFVFVRGIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVIPPLGFQTASYRTVKP"
     gene            complement(7348..8736)
                     /locus_tag="AABD07_001527"
     CDS             complement(7348..8736)
                     /locus_tag="AABD07_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFB2356026.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGCDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLAPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGTSFGYQTRALSKPVDLIVATPGRLTDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPADRQTLLFSATWDGAVGKLARKLTKDSEIIEVERVDGQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLTDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPARKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDSFKKTGEGFKGKRKAGDS
                     FAGKSERRYKDR"
     gene            9064..10011
                     /locus_tag="AABD07_001528"
     CDS             9064..10011
                     /locus_tag="AABD07_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFB2356027.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPGEYEAWLAEVLEAVAFVTGFEPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVIAENGRKFWVNLDKYLDTGFFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDMERHKIVRADVFQYLQTAY
                     GEGRQFDLIVMDPPSFSNSKKMPGILDIQRDHQKLIDGAVNLLASDGILYFSNNLRSF
                     VLDDSVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            complement(10063..10395)
                     /gene="trxA"
                     /locus_tag="AABD07_001529"
     CDS             complement(10063..10395)
                     /gene="trxA"
                     /locus_tag="AABD07_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HFB2356028.1"
                     /translation="MSSELIVHTGDAAFEQDVLKSDLPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
BASE COUNT         2486 a         2750 c         2776 g         2512 t
ORIGIN      
        1 ttattgcgtt taaaataaat ttcttcgcct tcttcggtgc tttgcccgcc attcaatacg
       61 caatctttaa acggaaaatc caacacaata tccgaattgt ctttcaaaaa gcggttgccg
      121 tccgtcaaac caatgcggtt ggcgtatttt gtgtaggaat tattgatgct gtgtttgtcc
      181 aagaaaaaac ggaaatcctg caatttaaac accaaaacac cattcacttc cacaaagaaa
      241 tggcgtttta actcatcatt attcaataac aaaccgataa tggacgggtc ggttttttcc
      301 accaaatcca acaggatgtt tttggccaaa atggtttttt cttcgttcgc ccatattttt
      361 tcgtgtgata gcagggcttg ggctaattcg gtttgaatgc ctgtcttcat cgttataaat
      421 cctcatcagt tattttaatg tgccattctt gtgtaacggc aaatggcttt acaaataaat
      481 tataataaaa tcaattcttt gatgtctttg ctgtttccgg gggaagttcg caaagttgcg
      541 ataagcgggg cgggtgtccg agtgtgtcgt gattttacgg aaatatcaac acattattca
      601 aacgcagccc gtatttttaa ccgccgctca ggcggaggat gccgccgtgt tcatcaggcg
      661 caaggctttc atacggcata tttctttttg atattccgcc aaaccgacaa agcggccgtt
      721 ttccgtgtaa acgcgtaccg gcgtatcgga aggcaggtct tcctcgaaac gcggccgttg
      781 cccgcattgg agcatatgga cggcataatc gtttaaaacg gtttggggaa agtgtgaaac
      841 caatacgtcg cagggcagca gcagaccgtc gcgttctgtt tcgtttaaat ttgccaaagc
      901 ttcgagcgtg tggctttggg cgatggtaaa gccggcggtt tcggtgcggc gtagggcggt
      961 caggtgggcg aatgtgccga tgtgtttggc gatgccttcg ctgagggtgc ggatgtaggt
     1021 gcctttgctg caacgcacgc ttatcacggc tttgggcgcg tcaaactcgg caatatcgat
     1081 agagtaaacg gtaatgtcgc gcggtttgcg ttcgataaca atgcctttgc gcgcgtattc
     1141 gtacaacggt ttgccttcgt gcttgagggc ggaaaacatc ggcggcactt ggcggatgtt
     1201 gcctgtcagt gcttggcagg ccgtctgaaa ttcggctaag gaaatatcgg cgcgggcggc
     1261 ggcaatgatt tctccttcgg catcgcccgt gctgctggct tcgccgagtt tcagcgtggc
     1321 ggtgtaggct ttgtcggcat ccagcaggta ttgggcgaac ttggccgctt cgccgaagca
     1381 gacgggcaaa agtccggttg ccaaaggatc gagcacgccg gtatgccctg ctttttcggc
     1441 atgaaacaaa cgccgcgctt tttgcagggc ggtgttgctg gaaaggcctt cgggtttgtc
     1501 gagaagaaga acgccgttga ccgggcgttt ggcgggttta ttggtcatat taattaggga
     1561 atattaatgt tcagaccgtc tgaaagggtt cggacggcct gcgtgtcagc ttaattcttc
     1621 attcaataat tcacgaacag agtgtttttc atcaattaga tcaatgctga ttgcatcaaa
     1681 gccatttcgt tttaatgagt caaaactaat gatgcggcca tcaattaagg ggacttgtcc
     1741 ttcagaattg acgaaatctt catattcatc ttcgtagtct atattgtaat aaagatgaat
     1801 cggaactcgg taagtatatt catccaaatc agttaacgtt ctgttttgct tttgattttg
     1861 gctatatttg tcgcagaaca tagcgttata gccatgttcc gccccatcaa acaatacgat
     1921 ttcatcgccg cttacagctt ctaccgccac aatttttacc ggcgccttat cagtatcggt
     1981 aatcaatcca tcaaaaggct ctccatagta acggatgtgg aaagtatctc taccttggca
     2041 ggataatcaa aagcaacgat gcccgccttc aatttgcagg ttatcactat gtgcataggc
     2101 ggctaaatgt tcgggaatca gattgttcat tctggcagta tcagtcttca accggttttt
     2161 ccgccgccac ttgatcgata agggcggaca ggctcatacc gcgttccaaa gattcgtcgt
     2221 atttgaaatg cagttcgggg attttgaaca gcttgatgcg tttggacaat tcgctgcgga
     2281 ggtgtccgcg cgcgtgttcc agcacttctt ccgtaatttc gcgcgtatct tggttcaaaa
     2341 cggtgtagaa cacggtggcg tggctgtaat cgcgggtaac ttcgacttcg ttgatagtga
     2401 tgaagccggc gcgcgggtct ttcagtccgg tacggacgag ttcggcaagc tcgcgcataa
     2461 tttgttcttt gacacggtct tggcgggcgt agccgcgttg gggttttctc atgaatatcc
     2521 tcagatttgg tgtcagacgg catttctgcc gccggggcgg ttgcgaaagg gcgtattata
     2581 gccgaatcgg cgggatttta aggtaatacg ttgataagca cggatatagt tattatactt
     2641 ggcaacccga acggcgcatg ccgtttctgc aacgcataca ttgtaaagaa agccatgtcc
     2701 aacgaaaacc gtacctgttc cttttgcgga aaatccaaat cacacgtcaa acatttgatt
     2761 gagggcgaaa acgcctttat ctgcgacgaa tgcgtctcaa actgcctcga aatattgtac
     2821 gaaggcgaca acggcggcac gcctccggaa aatgccggag gggagccgga agaatccggc
     2881 aaactgccca cgcccgccga aatcgttgcc aacctcgacg attatgtcat cgggcagggg
     2941 caggcgaaaa aggcgctggc ggttgcggtt tacaaccatt acaaacgcct gcgccacccg
     3001 aaagccgacg gcggtgtcga attgtcgaaa tccaacatcc tgcttatcgg cccgaccgga
     3061 tcgggtaaaa cgctgttggc gcaatctttg gcacgcaaac tggacgtgcc gttcgtgatg
     3121 gcggatgcga ccacgctgac cgaagccggc tatgtcggcg aagatgtcga acaaatcatt
     3181 accaaactgt tgggcaaatg cgatttcgat gtcgaaaaag cccagcacgg cattgtctat
     3241 attgacgaaa ttgacaaaat ttcgcgtaaa agcgacaacc cgtccatcac gcgcgacgtg
     3301 tccggcgaag gcgtgcagca agccttgctg aaactgattg aaggtacggt ggcaagcgtt
     3361 ccgccccaag gcggacgcaa gcatccgaat caggaattta tcaacgttga taccgccaac
     3421 atcctgttta tctgcggcgg cgcgtttgca ggcttggaaa aagtgattcg ccagcgcacc
     3481 gagaaaggtg gtatcggttt cggcgcgtcc gttcacagca aggacgaaaa tgccggcatt
     3541 accaagctgt tcggcatcgt cgaaccggaa gatttaatca aattcggcct gattccggaa
     3601 ttaatcggac gtttgcccgt gattgcaact ttagaagaac tggatgagga cgcgctgatt
     3661 aatattttaa ccgagccgaa aaacgctttg gtcaagcagt atcaagcctt gttcggcata
     3721 gaaaacgtcg ggttggaatt tgaagaaggc gcattgcgtt ccatcgcgcg gcaggcaatg
     3781 gaacgcaaaa ccggcgcgcg cggcctgcgt tccatcgtcg aacgctgcct gctcgatacg
     3841 atgtaccgcc tgcccgattt gcaaggcttg aaaaaagtgg tggtcggcaa ggcagtcatc
     3901 gaagagggca gggaaccgga attggtgttc gagtcctgat ggcaaacaaa accgcttcgg
     3961 aacgttggat cacgtttccg aagcggtttt ttgtttctga tgccgtctga ggccttcccg
     4021 tcttcagacg gcatctgctt tctgcctagg ggcggtttgc ggcggcaaat tccgtcagca
     4081 cgtgttccaa acgccgcaaa ccttccgcaa tatcctcatc gttcaacagc agcgaaggcg
     4141 cgaaacgcaa tacgtccgca cccgcaacta agatcatcac gccgtgtttc aaggaggtag
     4201 cggcgatttc ggatgagcgt ccgcgataag gcgtgtccaa cgcgcagccg agcagcagcc
     4261 ccatcccgcg aacctgtgag aacaagcctg ttttcctgcc caaatccagc aatgccgtct
     4321 gaagtttctg cccctgactg cggacgttgt gcaaggtttc cggcgcgttg atgatgtcga
     4381 aggcgcggct gccgaccgca cacgccatcg ggttgccgcc gaaagtcgag ccgtgcgtgc
     4441 ccggttggaa ggcggcggca atcttttctg tcgccagcat cgcgccgatc ggaaagccgc
     4501 agcccaaggc ttttgccgaa ctcaaaatat cgggaacaac gccgtaatgt tcataggcaa
     4561 acagcctgcc cgtatgcccc atcccggttt gaacttcgtc caaaatcaac aacgcattgt
     4621 gccggtcgca cagacggcgc gccgcctgca aatattccgc agtggcgggc aggatgccgc
     4681 tttcgccctg tatcggctcg atgatgaccg cgcaggtctg ttcgccgacg gcagcttcca
     4741 gcgcggcaat atcgttgaac ggaacgtgcg taatgccttg cggcagcggt gcataatcct
     4801 tactgtattt cggctgtccg ccgacggaca cggtaaacag cgtgcgtccg tggaaactgt
     4861 tgatacaggc gacgatttcg cttttgcctc cgccgaaacg gtcgcgcgca tatttccttg
     4921 ccagctttaa cgccgcctca ttcgcttccg cgcccgagtt gcagaaaaaa accttgtcgg
     4981 caaaactgtg tttcaccaat ttttgcgcca attcctgcgc cggccgcgtc gtatagatat
     5041 tggaaatgtg ccacagcttg tgcatctgcg cgtttaaagc atcgacaagg gcagggtggc
     5101 agtgccccag agcgttaacg gcgatgccgc ctgaaaaatc aatatattca cgcccttccg
     5161 tatcccaaac gcggctgcct gaagcgcgtt cgggaatcat cggggcaaag gcgaaattgg
     5221 gggtcagata gttttgcata attgctcctg attgcggttt tgttcgggat tatgcaccgt
     5281 ttttcaaggc ggataaaggg aaattgccga caatatcggg cagtggtaaa aataaaccta
     5341 aatattttca accggatagc tgaaaaaaac aaaaaaattt cgatataatg cttgaggcgc
     5401 ggcagcgttt tgatttagaa tctccccaat atttttatct tcggacggca tttcatcatg
     5461 caaggcaaaa cgtttacaac cgcttactgc tattggtacc acacagacgt gcggtgcttt
     5521 tttgcgcttg cttgaaatcc atcccatacg caaaacaggc cgctcgaaaa cggggcggct
     5581 tttttgttac cttcacacag gtcgcccgat tcggcaacac acgacagaat caggaaaatg
     5641 accatggatg caatgcccca aaccgccgta caaaacgaaa acctgcacac ttgcagcatt
     5701 attgtcgatg atgcgcagga tttttccccc atgcttctcg atgcagggcg ggacgacacg
     5761 ctcatcagcg aatcgatgat tccgcaaatc cgcaccgttg ccgccctgat agccgccgaa
     5821 cggcacgact tcagccgcag cagccccgcc gagtttaccg atgccgccga tttttttgcc
     5881 gcacggattc tcgtattggg cgtgcgacgc ttccatctgg acgtatcgct gcttcagatt
     5941 ttgaaaaccg caaacaagcg cgcctgccgc tttgccgaaa aacaccgcct gtttttcaca
     6001 cccgcacaag ccgaattgag cctgaacaaa cacaaaaacc gccgcctgct gaccatagaa
     6061 accgaacacg aagtcgaaaa caaaggcaac cctgtcgcca acagcctcgc atttgtccgc
     6121 aaactgcaca ccctacccct gtaaacatca cgatttgccg gcagaatgct tgccaaaatt
     6181 cccgacggcg atacaataca accgattttc cacccgaaca ggacacacat gaaaaaaatc
     6241 atcgcctccg cgcttatcgc aacattcgca ctcaccgcct gccaagacga cacgcaggcg
     6301 cggctcgaac ggcagcagaa acagattgaa gccctgcaac agcagctcgc acagcaggca
     6361 gacgatacgg tttaccaact gactcccgaa gcagtcaaag acaccattcc tgcccaggcg
     6421 caggcaaacg gcaacaacgg tcagcccgtt accggcaaag acgggcagca gtatatttac
     6481 gaccaatcga caggaagctg gctgctgcaa agcctgattg gcgcggcggc aggcgcgttt
     6541 atcggcaacg cgctggcaaa caaattcaca cgggcgggca accaagacag ccccgtcgcc
     6601 cgtcgcgcgc gtgctgccta ccatcagtcc gcacgcccca atgcgcgcac cagcagggat
     6661 ttgaacacgc gcagcctccg tgcaaaacaa caggcggcgc aggcgcagcg ttaccgcccg
     6721 acaacgcgcc cgcccgtcaa ttaccgccgt cccgctatgc gcggtttcgg cagaaggcgg
     6781 taaacccggc gcgccaatgc cgtctgaagg gctttcagac ggcatttttg tatttgttag
     6841 gggcattgtt atgttgccgt ttgattttca gacggcattt tgtttccaag cgtttgatgt
     6901 cgggatggca attctgatct acgtgcgttg gcagggcggc attgtcatac cgccgttggg
     6961 ttttcagacg gcatcatatc gaaccgtcaa gccgtagggc gagattgggt aggcaggaat
     7021 gcccatcctg catctgaaac ccttctgcgt cattcccacg caggaaggaa tctagatatt
     7081 tgaatttacg gaaattttca atcgttgcca aagcggaaaa gggtttttat agtggattaa
     7141 caaaaatcag gacaaggcga cgaagccgca gacagtacag atagtacggc aaggcgaggc
     7201 aacgcggtac cggtttaaat ttaatccact atattgcaga ttaatccttt gggtatcaaa
     7261 gccgggcggt gctgaaacat tacaaaaatg ccgtctgaaa ctcgaaatcg gtttcagacg
     7321 gcattggttt acgcggcagg ttggggctta gcggtctttg taacggcgtt cgcttttgcc
     7381 tgcaaaagag tcgccggctt tgcgtttgcc tttgaagcct tcgccggttt ttttgaaact
     7441 gtctttctta aagccttctt tcttgaaacc ttcgccgcgc gttttgccgc cgaagccttc
     7501 tttgcccggt ttatgatcgc cgcgccggcc gccggatttc ctatcgcccc agccgccttt
     7561 gcctttcggc ttgccgcctg cggatttgcg tttgcgggcc ggctccatgc cttcgatggt
     7621 cagttcgggc agtttgcggt taatgtattt ttcgattttg tggactttga cgtattcgtt
     7681 cacttcggca aacgtaatcg caatacccgt gcggcctgcg cggccggtgc gcccgatgcg
     7741 gtggacgtag tcttccgcct gtttcggcag gtcgtagttt atgacgtggg taatggtcgg
     7801 tacgtcaata ccgcgtgcgg caacgtcggt ggcaaccaaa attttgcagc ggcctttacg
     7861 caaatccgtc agcgtgcggt tgcgccagcc ctgcggcata tcgccgtgca ggcagttggc
     7921 ggcgaaacct ttttcgtaca attcatccgc gatgacttcg gtcatcgctt tggtggacgt
     7981 gaaaatcaca cattggtcga tgttggcatc gcgcaggatg tggtcgagca ggcggttttt
     8041 gtggcgcata tcgtcgcagt acaacaactg ctcttcgatt ttgccttggc cgtccacgcg
     8101 ttcgacttcg ataatttcag agtctttggt cagtttgcgc gccagtttgc cgactgcgcc
     8161 gtcccaagtg gcggagaaca ataaagtctg acggtcggcc ggggtggctt ccacgatggt
     8221 ttcgatgtcg tcgataaagc ccatatccaa catacggtcg gcttcgtcca aaatcagcac
     8281 ttccaaacgt tcaaaatcaa ctttgccgct ttgcatcagg tccgtcagac ggcccggagt
     8341 ggcgacaatc aaatcgaccg gtttgctcag ggcgcgggtt tggtagccga acgatgtgcc
     8401 gccgacgatg ctgacggtgc ggaaccagcg catatttttg gcatacgcca gcgcgttttt
     8461 ctcgacttgc gccgccagtt cgcgggtcgg tgccaacacc agcgcgcgcg ggcctttgcc
     8521 cggtttttcg ctgcgtttgg tcagtcgctg caaagtcggt aacagaaagg ctgcggtttt
     8581 tccggagccg gtttgcgccg aagccatgat gtcgcagcct tccaaagcaa acggaatagc
     8641 ttgcgcctga atcggcgtcg ggctttcgta accctcgctg ctgacggcgg acaaaatgtt
     8701 tttatcaagg ttcaaatcgg caaatttaat agacatggct atccttggaa gacaacaacg
     8761 cccgcgtccg aaaggttcag acggcctgaa gcagggaagg gtaacgatac ggggaatgtg
     8821 aagttacagg gttgtcgcaa gcggcttgct tgtggtttac atcgacggca acctgcacag
     8881 atacgctttg caagatcaaa gcaacaaaag aaacgcgccc gtaagggcgg tttaggttgg
     8941 aaggcgatgg cttcgtatga cgatataagc agagaatggt atagggtttg cccgaaaagg
     9001 tcaagcaatc gggcgttaat tacagtaaaa tttccgtttt ccactttatt ccgcctgaaa
     9061 tcaatgaccg acatcacacc gtttgccaac cgcttgggca aaaacatcaa acaccttatg
     9121 aaatgggcga aacgcaacgg catcgaagcc tggcgcattt acgaccgcga catcccccaa
     9181 ttcccttttg ccgccgatgt ttacggcgat cgaatccacc ttcaggaata cgataccggc
     9241 tggctgatgc ggcccggaga atacgaagcg tggcttgccg aagtattgga agccgtcgct
     9301 ttcgttaccg gttttgaacc cgaacaaatc cgtctcaaac gccgcgaacg ccaaaaaggt
     9361 ttgcagcagt acgagaaaac cggcaaggcg ggcgacgatt tcgtcattgc cgaaaacggc
     9421 cgcaagtttt gggtcaacct cgacaaatac ctcgacaccg gcttcttcct cgatcaccgc
     9481 aacacgcgca aaaaagtcgg cgaaacggcg gcgggcaaac gttttttgaa cctgttttcc
     9541 tacaccggca gcttcaccgt ctatgccgcc accggcggcg cggcatccag cgaaaccgtc
     9601 gatttgtcca acacttatct cgattgggcg aggcgcaatt ttgaattgaa cggcatcgat
     9661 atggaacggc acaaaatcgt ccgcgccgac gtgttccaat accttcagac ggcatatggg
     9721 gaaggcaggc agttcgacct cattgtgatg gacccgccca gtttttccaa cagcaagaaa
     9781 atgcccggca tcctcgacat ccagcgcgac catcaaaaac tcatagacgg cgcggtgaac
     9841 ctgctcgctt cagacggcat tttgtatttt tccaacaacc tgcgcagctt cgttttggac
     9901 gattcggtat cggaacaata cgccgtgaaa gacatttcca aacaatccgt tcccgaagat
     9961 ttccgcaaca aaaaaatcca ccggtgttgg gaaatccgcc acaaatctta agggtgcgaa
    10021 aaagccgccg gaatcttccg gcggcttttc gattgcactt tatcaggcga tggaggcttc
    10081 gacaaaggcg gtcagctgac cttttgccaa tgcgccgact ttggtggcga cgacttcgcc
    10141 gtttttgaac accatcaggg tcggaatgcc gcgcacgccg aaacgggacg gggtggcttc
    10201 gttgtcgtcg atgttgattt tgactacttt cagacggcct tcaaattcgg cggcaatgtc
    10261 gtccaaaatc ggggcaatca ttttgcaggg gccgcaccac ggagcccaaa agtccagcag
    10321 gacggggagg tcggatttca aaacatcttg ctcgaaggcg gcatcgccgg tgtgtacgat
    10381 taattcgctg ctcattattt ttccttttcg gttgggattc gcacgatagc gtgcaggata
    10441 gggcttgggc ataaaaattt caagtgggcg ggcgggataa tagtttttct gtaccgcccc
    10501 aatcgccttt gcaaattcta aaaa
//
LOCUS       DAWXHA010000078        10367 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.078, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000078 DAWXHA010000000
VERSION     DAWXHA010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10367
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.078"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            250..1911
                     /locus_tag="AABD07_001530"
     CDS             250..1911
                     /locus_tag="AABD07_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HFB2356029.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VAEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GVGKDGGPTDSFQPGMELWARQTLFAEGCRGSLSKQIIERFQLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFIYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENFEEVESFDSGKEAGNYQKLFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAVCKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIIE
                     ENGSPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(2045..2539)
                     /locus_tag="AABD07_001531"
     CDS             complement(2045..2539)
                     /locus_tag="AABD07_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFB2356030.1"
                     /translation="MKKTLLAIVAVFALSACRQAEEAPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTVKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWIDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDA
                     YIFK"
     gene            complement(2536..3366)
                     /locus_tag="AABD07_001532"
     CDS             complement(2536..3366)
                     /locus_tag="AABD07_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFB2356031.1"
                     /translation="MNPVWIITGKEARDSLRNRWVLAAVLLLAALALSLGFLGSSPTG
                     SVKVDPLTVTVVSLSSLSIFLIPLIAMLLSYDALIGEIERGTMALLLSYPIWRNQILA
                     GKFVGHLIILALATTAGYGLAGITLQLANGGFDIAVWKPFALLIAASVILGAAFLSMG
                     YLISAKVKERGTAAGISIGVWLFFVVIFDMALLGILVADSKQVITAPVVETVLLFNPT
                     DIYRLLNLTGYENTAMYAGMAGLSGQIGLTVPVLLTAQVLWVIIPLVLAAGIFRKRRI
                     "
     gene            complement(3363..4289)
                     /locus_tag="AABD07_001533"
     CDS             complement(3363..4289)
                     /locus_tag="AABD07_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFB2356032.1"
                     /translation="MPSENTKGTTMTTHHVELRKVTKRFGAQKAVSQVDLVLKAGESV
                     GLAGHNGAGKSTIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALHP
                     SLTGIETLDFYAKLKKQPLTQNRGLLERVGISQTAHRRVGTYSKGMRQRLALAQALLG
                     EPKVLLFDEPTTGPDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRIVVMKN
                     GVKVADGSMDELHVQSGLPLTVNIRLNAPRTLSSRWQPLSDGISYRAQCQAEERMELL
                     GELGSLSDLAYFDIHTPTLDEMYARFLKREDV"
     gene            complement(4317..5672)
                     /gene="nosD"
                     /locus_tag="AABD07_001534"
                     /pseudo
     CDS             complement(4317..5672)
                     /gene="nosD"
                     /locus_tag="AABD07_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712464.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            complement(5845..7812)
                     /gene="nosZ"
                     /locus_tag="AABD07_001535"
                     /pseudo
     CDS             complement(5845..7812)
                     /gene="nosZ"
                     /locus_tag="AABD07_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712466.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-dependent nitrous-oxide reductase"
     gene            complement(7922..10246)
                     /locus_tag="AABD07_001536"
                     /pseudo
     CDS             complement(7922..10246)
                     /locus_tag="AABD07_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709592.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein NosR"
     gene            complement(10155..10367)
                     /locus_tag="AABD07_001537"
                     /pseudo
     CDS             complement(10155..10367)
                     /locus_tag="AABD07_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709589.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         2399 a         2745 c         2824 g         2399 t
ORIGIN      
        1 attttggcgg tcgtgccgaa agggagggat gccggtgggg ataaggcgtt tttcacacgc
       61 agtccgaaac gtcagacgga gtttgcggtc ggacaggtaa aatggtggcg tgcttattga
      121 aatttcgaca aaggtcgtct gaaaaccgaa aatatggttt tcagacgacc tttgttgtat
      181 ttggtaacta tatgttcccg ttgtataatt acggatttgc aattcaataa taaatacaca
      241 ggaaccgcca tgacagaatc catcacccgc gacagtatgc aatacgatgt cgtgattgtc
      301 ggcgcaggcc cgtcggggtt gtccgccgcc atcaaactca agcagcttgc cgaacagaac
      361 gggcgcgaaa tcagcgtttg cgtggcggag aagggttcgg aggcgggggc gcattcgctg
      421 gcgggcgcgg ttatcgatcc gattgcgctg aatgagctga ttcccgactg gaaagaaaaa
      481 ggcgcgccgc tgacgcgcac ggtaactcag gacaaggtgt tgttcctgac ggagaaaaaa
      541 gcgttcaatc tgcctattac cccgaatttc gacaatcacg gcaactacat cgtcagctta
      601 ggcgaagtcg tgcgctggtt ggcggagcag gcggaaaata tgggcgtgga aatctatccg
      661 ggctttgccg ccgccgaagt gctgtatcac gaagacggct cggtcaaagg tattgcgacc
      721 ggcaatatgg gtgtaggcaa agacggcggg ccgaccgaca gtttccagcc cggcatggag
      781 ctttgggcgc ggcaaaccct gtttgccgaa ggttgccgag gttcgctttc caagcaaatc
      841 atcgaacgtt tccaactcga ccaaaacagc cagccgcaaa cttacggctt gggcatcaaa
      901 gaagtttggg aagtgccgtc tgaacagcat cagcccggtt tggtggtgca tagcgcaggc
      961 tggccgctgg acagcaaaac ctacggcggt gcgtttattt accatttcga cgacaacaaa
     1021 gtcgccgtcg gcttcgtggt cggtttggac tatcaaaacc cgtatctgtc gccgtttgaa
     1081 gagttccaac gtttcaaaac ccatcccgaa atccgcaaaa cctttgaagg cggccgccgc
     1141 attgcttacg gcgcgcgttc gctgattgaa ggcggtttgc aaagcctgcc gaagctctcg
     1201 ttcaaggggg gcgttttaat cggcgatgcg gcggggttcc tcaatatgcc gcgcatcaaa
     1261 ggcattcata ccgcgatgaa atccgccatg ctcgccgccg aagccgtgtt ccccttgttg
     1321 gaaaactttg aagaagtgga aagcttcgac agcggcaaag aagcgggaaa ctatcaaaaa
     1381 ctgtttgaac aaagctggct gtatcaagag ctttatgccg cgcgcaatgt ccgtccgtca
     1441 ttcaaatggg gcgtttacct cggctcgctt tataccggca tcgaccagat gattttcaga
     1501 ggcaaagccc cgtggacctt gaaacatcac ggcaaagaca acgagcagct caaaaaagcc
     1561 gccgtgtgca agccgattga ttatccgaaa cccgacggtg tgttgacctt tgaccgcttg
     1621 agcagcgtct tccttgccaa tctcgcgcac gaagaaaacc agcccgacca tttggtgctg
     1681 aacaatccgc aaacgatgat agacgtgaac tataaagaat acgcctctcc cgaaacgcgc
     1741 tattgtccgg ccggcgtata tgaaatcatc gaagaaaacg gcagtccgcg cctgcaaatc
     1801 aacgcggcaa actgcgtgca ctgcaaaacc tgcgacatca aagacccgac gcaaaacatc
     1861 acttggattt gccccgaagg cgcaagcgga ccgaattacg gcgggatgta aacctcattc
     1921 cgccgttacg cccggtcagg aataaggaat ggggcagttg ttcgaacctg ccccgtttga
     1981 acctatgaca aaaaatgccg tctgaacctt ggcttcaacg ttcagacggc atttctgttt
     2041 ggatttactt gaaaatgtaa gcatcgggca tatcgtcaaa accgacgacc ttgccgcctt
     2101 tatcctttgc aaatttttca gcctgctcct tgttgccgaa cggcagcgcg tcttccgcgc
     2161 ccataccgcc gataaagccg ctgtcgatga cgtaaaaggc ttttttcgca tctatccact
     2221 ccgtgtcggc attaggattc gtccaatcgg taacattgcc catatcggta acgtaaatca
     2281 cgcggatgcc tttgggctct tcgggcagct tggtatagcc gaacatctgc ttgacggtgg
     2341 agaaccaaac gggctgatcg ggtttgccgt tcaaaaaaat ctgggctttg gggccgttgt
     2401 gttcggtcag gttcatactg caatagtgtc cgaccgaacg gtcgctaatc tgccggggta
     2461 aaggcggcgg tgcctcttcc gcctgccggc aggcacttaa ggcgaaaacg gcaacaattg
     2521 ccaacagggt tttcttcata ttcgtcgctt tctaaaaatt ccggctgcca aaacaagcgg
     2581 aatgataacc cataaaacct gcgcggtcag caaaacgggg acggtcaggc cgatttgtcc
     2641 gctcaaaccc gccatacccg catacatagc cgtattttcg taaccggtca ggttgagcag
     2701 gcggtaaatg tcggtgggat tgaacagcag caccgtttca acgacgggcg cggtgatgac
     2761 ctgtttcgag tcggcaacca gaatacccaa aagcgccata tcgaagatga cgacgaaaaa
     2821 caaccatacg ccgatggaaa taccggccgc cgtcccccgc tctttgacct ttgcactaat
     2881 caagtagccc atagacagaa atgccgcacc taaaatcacg ctggcggcaa tcaacagcgc
     2941 aaagggtttc caaacggcga tgtcgaaacc gccgttggca agttgcagcg taatgcctgc
     3001 caatccgtaa cctgccgtgg tggcaagggc gaggatgatg aggtgtccga caaacttgcc
     3061 ggcaaggatt tggttgcgcc aaatgggata actcaacagc aacgccatcg taccgcgttc
     3121 gatttcgccg atcagtgcgt cataagaaag cagcatcgca atcagcggaa tcaggaaaat
     3181 agacaggctc gacaggctga cgacggtaac ggtcagcgga tcgaccttga ccgaaccggt
     3241 gggcgagctg ccgaggaaac ccaaagaaag ggcgagtgcg gcaagcagga ggacggcggc
     3301 aagcacccag cggttacgca ggctgtcgcg ggcttctttg ccggtaataa tccaaacggg
     3361 gttcatacgt cctccctttt caagaaccgt gcgtacattt cgtcaagcgt cggcgtgtgg
     3421 atgtcgaaat aggcaaggtc ggacaggctg cccaattcgc ccaacagttc catacgttct
     3481 tcggcctgac attgcgcccg gtaggaaatg ccgtctgaaa gcggctgcca gcggctgctg
     3541 agggtgcgcg gcgcattgag gcggatattg acggtcagcg gcagcccgct ttggacgtgc
     3601 aattcgtcca tactgccgtc ggcaacctta acgccgtttt tcatcacgac aatgcggtcg
     3661 gcgtgtccgt ccaactcggc aagggcgtgg gtactgagca atacggtcgc gccgcgcccg
     3721 ttgagttcgc gcacgacttc gtaaaacatt tgtcgtgatg cagggtcggg gccggttgtc
     3781 ggttcgtcaa acagcaggac tttgggctcg cccagcaggg cttgtgccaa ggcaaggcgt
     3841 tggcgcatcc ctttagaata agtgccgacg cggcggtgtg cggtctggga aatgccgacg
     3901 cgctcaagca gcccccggtt ctgcgtgagc ggctgttttt taagtttggc ataaaaatcc
     3961 agcgtttcga tgccggtcag cgaagggtgc agcgcaacgg tttcgggcag gtagccgatt
     4021 tggctgcgaa gccgcgcccc cgctttgctg ccggtacgtt cgcccaaaag catcacttcg
     4081 ccttcggtcg gggtaatcag cccgagtatc agcttcatga tggtggactt gcccgcgccg
     4141 ttgtgtccgg caagcccgac gctttctcct gccttcaaaa ccaaatcgac ttggctgacg
     4201 gctttttgcg ccccgaaccg tttggttacc ttcctcaatt cgacatgatg tgtggtcatg
     4261 gttgttcctt ttgtgttttc agacggcatt tgaatccggg tgccgtctga agcagactag
     4321 ttcaaagaac cgttttccgc cctgccccgt tccgactgcc gcgtttcggc ttctttgagc
     4381 aactcgtcct tcatcgcctg ataacgggtt tgaattttgg gggcataagg cttcatcagc
     4441 ggtttgctgt ccaccacgcc gccgggcaga acggcgggaa actgcgcctg cgcccatttg
     4501 acgatgctga ttgcgggact gttcatcaag aggcgcgata cgggcgcgcg ccagatgatt
     4561 tggtcgatga tgccgtcggg acggtacgcg ctgtctccga agccgtcgcc gttcaaatcg
     4621 aacgggctgt tgtcgctcca gtagttgccg tgtccgccct cgctccagtc gagaaagcgc
     4681 gtactgacat atttgacctg gcttccgttg ttgataaagg aattgtcgtg cagggacgcg
     4741 ccttcgatgg cggcggtaaa gtgcatgccg atttggcagt tttcaaaatg attggcggac
     4801 agtttatcgt agttggcatt gtaggcaaaa acgcacttgc ccgctttgtt gataatattg
     4861 tcgtgaatat cggaatagtt gacatagttg agcatgatgc cctaatcgcg gctgccgacg
     4921 gcgatattgt cgaacacttt gagccgttcg gaaaacatca gcacatagcc catattgttg
     4981 cccacgcaaa tattgccgct gacttcgctg tcgttggtgt acatatagtg gacggcgaaa
     5041 cgcaggtcgc tgaagcggtt gtttttatag gtgttgtgcg tgctggtatt ggaaaaaatg
     5101 ccgtcccgcc ctttggaaat gtcgttgccg acgacctgcg cgccgggcgc gttccaaacg
     5161 gtaacgccat tgccgcgctc attcacgcgc aaggtcgcat cgccgacgat tttattctcg
     5221 cgcaccatcg catcggcaga accatgaagg tatacgccga acgaattatc aaaaatattg
     5281 ttgtgttcaa tcagggcgcg cggggcggct ttttcgagat aaataccggc atccattgct
     5341 ggcaggctca taccggaacg ggtaacggtc aggttgcgga gcgttacgtc cggcgcgtgt
     5401 acggctatgg tacgcccgct cttgtcccct tcgatggttg cggaacggtc ggcaggccct
     5461 tcaatcgtaa tcggtttgtc gatataaagt ttggtttgat atacgccgga agccagtttg
     5521 atcgtatcgc ccgcccgggc gcgggcaaaa atttcggcaa ggttgtcttg cggggaaacg
     5581 tggacgacgg ctgccgatgc cgtctgaaaa atgctgccgg cggcaagtat cagcacggcc
     5641 ttcagccata tacggagcgc ggatgtgtgc atagtgtccc tctgtttcgt tcggtatggc
     5701 cgaacaaaat aaagcatcat tcaaatgtgc ctgtttttat agcgaaaccg cctgaaacgg
     5761 tacggcaagc ggtttggcta taaatgccgt ctgaagacct gttgccttca gacgccattc
     5821 tccatattca gccgtcgggc cgcattattt gggatgaaca atcatctgac cggacatttc
     5881 catatgcaat gcgtggcaga accattggca gtagtaccag tgcacacccg ggcggacggc
     5941 tttgaaggtt acggaagaag tggcttgcgg gccgatttcc atagcgatgc cgcagccttc
     6001 caaagtgaag ccgtgggtca ggtcctcgat ggtttcgacg ttggtaacgt aaacggttac
     6061 ttcgtcgcct tggttcactt caaactgcgg gatactgtaa gcaggcgcga cggccgtcat
     6121 atacacgcgt actttgttgc cttcgcgtac ggctttggcg gctttttcca gctcgacacc
     6181 gtcttttttc gcctgttcca aagcatcctg ctagaaccac gggtctttgc ggtcccaagt
     6241 tttgcccggg ttcagtttgg acgcggcaac caaacacaag tcgtgcggtt cggcaaaagt
     6301 cgggttgtcg tgtaccagac gcatttcgtc gccggagatg ccgatcaatt ggtcgcactc
     6361 gggtttcaaa ggaccggcat tcaagaagcg gtctttggag aatttgttca aggacaccag
     6421 ccattgaccg tcggcttctt tggtttcgcc catggtcgta tggttgtgac ccggttgata
     6481 gtgaacgtcg agtttttgtt tgatcggatc gattttatcg cctttgtagg ctttgatcgc
     6541 atcgtcaata ttccatttca ccatttggct gtcgataaac aatgtcgtat aagcattgcc
     6601 gcgaccgtcg aatgcagtgt gtaacgggcc gagacccagt tgcggttcgg ctacgaccac
     6661 atcgcgctct ttgattttgc cggcgaacaa atcgtccagt ttgctgacat ccaatacggt
     6721 aacggttgga gacagtttac cgttgggcat gatgtattta ccgtcagggc ttgcgttaca
     6781 gccgtgagga gagttcggca cagggatata acgcgtgtat ttggatttgg cctcagcgcg
     6841 gccgtccagc attttcacac cgttaacttc tttgaagtcg cccgctttga tgccttcttc
     6901 gatggctttc aggtcgaaaa cgacgcacca gtcctgctcg ttggaagacg caccttgtac
     6961 ggtcagcgcg cgctcggagt tgtagcaggt ggcaaaagaa tatttgcctt gatagtcggc
     7021 atcgccgttg tccaggttac cgtcaaccaa tacttgccat gcgatctcca tggtttcgcc
     7081 gtcgatggcg gtgtacactg cattccaggt tttcgcatca tccagtttgc ctacaccgct
     7141 gacaggggta atgtgttcgc cgttggcaaa aacataaccg gttttcggat aacgttgcgg
     7201 acgcagaccg tgaatacctg aatcattagg gatgtcgatg attttgtcgg ccttcatcac
     7261 atccaaacgc acgcggcaga cgcggttgtt tgccttgtcg ttggcatagg catagcggcc
     7321 gtcataagtt tggtcggtaa acgacaggtg cgggtggtgc aagtcgccgt tggggtagca
     7381 gcgcaggccg ccgtctttta agaatttacg ggtttcttcg gtaatattgc cgttgaggac
     7441 tttcaagctc tcattggtgc gtccccaacc ggtcgcgctg tccatattga acacggggat
     7501 acgcatcagt tcgcgcatag aaggcagacc gatcaggcgc atctcgccgg actggccgcc
     7561 ggaaaggaaa ccgtaatatt gatcgagttc gcccggaccg acttcggaag acagttggcc
     7621 gggtttggat tccccttgcg ccttggcgac gggagccgcg ccggaagcgt tagcggcagc
     7681 ctgttcgccg tctttagagc aacccgccaa acccaacagg cccgcaccgg caatacctgc
     7741 accggaagcg gcggccgtac ctaagaacga acgacggctc aagccgtttt gttctaattt
     7801 ttcgtctgac atacaacact ccttggataa aatacggcaa accggttttc ggacggcaag
     7861 ccgatgggaa aaaaatttta ttatccttcc ggggaaaccc tgcctgcctg acactttggc
     7921 ttcaggcttc ccccggatgc ttatttttca gattgcgccg tttcgggttt gacaaaacgg
     7981 acgacctgtt cctgcggctg cttagagaca ttttccaatt cccctgattt ggcagcagcc
     8041 tgtttttgtt tttcttattt tccgccacaa cttgcggaca gcgcgtatcg tggtggtaca
     8101 tcacttggca gtgcaggcac tggatacatt cgttcggatg gatgtcgccc tcgggcgcga
     8161 ttgcctgaac ggggcattcg tgcgtacaga tttggcaggg gttgccgcac attttgtagc
     8221 ggcgcagcca gtcgaacacg cggaatctgc ccggcagcgc gatgcccgca cccaaaggac
     8281 acagataacg gcagaagaag cgttcgataa acagccccgc aatcaaaagt gccacggcaa
     8341 aggcgacaaa ccaccaatcg cacatgaatt tcaagataat cgcagttttg aacggttcga
     8401 cttcggcaaa tttttccgcc gtacccaaat catacagcga aattgccaaa aaaccgaata
     8461 aaatcaggta ttttatgacg ttcaaacggg tatgcagcat atgcggtacg gtaatctgtt
     8521 tcacacccag ttttttggca atgcggttag tcaattcctg taatgagccg aaccgacaca
     8581 accaaccgca aaacgtcccc ctgttccaca gcagcatggt tgcagccgtg aacagccaca
     8641 ggatgaacac aatcggatcc atcaggaaga attcccaatg aaattcggta aggatggcgg
     8701 aaaacagcgt cagcgtattg acgaccgaaa gctgcgcctg tgcataccag ccgatataga
     8761 agagcgtaaa agttaggaaa gcaaagcgga agcggtcgta ccatttttcg taacgcacaa
     8821 tccaatcttg gaacaggaat accaaaagca ggatggtcag cgcaatgccg acgacgacaa
     8881 tctgcccctg tttcgctttc caaatctgtt tccataattg gttggataca ccgttttcag
     8941 ctgacgcatc ttcggcaatg ccgtctgaag cggtatcgga tgctgcggca ggtactgctt
     9001 cgacaggcgc gctgatttct acgggcggcg ctttaggatc atcgacgtaa taagcttggg
     9061 gcagttcgta atccaaatcg gcggtaacga aggctttatc gttcacactc aagacgcgct
     9121 gaaccatcaa ttacagccgc cacggctccg caccgtcaaa cgctacgcct tcagggatgg
     9181 taaaccaaga aacttcttta aaacgcggcg catcggcggc agacagctcg acgacgcgtt
     9241 cgtgttgggc atcggtaaaa cggaagctgt tctccccctg aatcatctcg atacggtcga
     9301 aaataccgcc gcgcacatag cccgaacctt tccaagaata acggccctct ccggcaacca
     9361 aaaccgcctg ctgcccgggt ttcagccgtt tttgcagatg cgcccagccg tcctcaccca
     9421 gcaggctttt accgatggaa ggctggctga ccaaggcaac atacaaatca ataaaggtat
     9481 cgtcaggatc gccctgttcg gcgtgatcgg ccacgccggc cttgccgcct ttctcaaaca
     9541 gtttgttgat ttgatcgagc gtgatatgca gatggccgac ggccttttgt ttcaaaagtt
     9601 cgtcccaaga caaaatatcc tgcttgtcgg gatttgccat acggcgcgga cgggtttctg
     9661 acgcaggcgc ggcttcccga acatcggaag cggatgccgt ctgaagggcc ttgtccgaac
     9721 ccagacggta ttggttggca atgaccttgt acgaacgctg gatgctgtcg ttaaccacca
     9781 tcagtgtaac agtcgcaccg ctgatgatgt cgcccggcgc cacgcccggg gtcggcggat
     9841 ttttaataaa attcagaccg atatatttgt cgatgaactt atcgacacgc gattgcggga
     9901 taccgatcag cataatcggt tcgtgatgat cgaccagttt cgccccggct atcgtgccgt
     9961 cgtttgccaa agccatcagc gtatcgatcg gtttgctcga ataaccgcgc gtattgaccg
    10021 catcggtcgt gatataaacc aaaccgagct gctcatcgcc tttgtaaacg cgggcaacca
    10081 taggcttgcc ttccggcttg ccgtaacgat ccgcacccgg aaaaatttcc gaaggctgta
    10141 ttttcgccag aaaatcaggc agacgctccg cataagcggg cagtgccgcc gtcaaaaaga
    10201 caaaggcggt aaaaaacgcc gttatccgcg cccgaaacgc agacatacgc cggattgaaa
    10261 aacaggacat agctatcccc gatataccga tactctttaa tattgatatt atatgaatca
    10321 tctatcggcg atttttgatg caaatcaaat ttacaaatct taaaacc
//
LOCUS       DAWXHA010000079        10275 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.079, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000079 DAWXHA010000000
VERSION     DAWXHA010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10275
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.079"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(208..684)
                     /gene="greA"
                     /locus_tag="AABD07_001538"
     CDS             complement(208..684)
                     /gene="greA"
                     /locus_tag="AABD07_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HFB2356033.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPAEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYGIIEVRYI"
     gene            1075..2376
                     /gene="aroA"
                     /locus_tag="AABD07_001539"
     CDS             1075..2376
                     /gene="aroA"
                     /locus_tag="AABD07_001539"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HFB2356034.1"
                     /translation="MTESVRLPAASLKPSTVALPGSKSISNRTLLLAALSDNVCEIHS
                     LLKSDDTDRMLEALDKLGVQIEHLAEGRLKVHGTGGRFPNRSADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLVDALRIAGADVEYLGNEHYPPLHIGKRQDCGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     EGYRVFKIPADAHYHAPEHLHVEGDASGASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKGRAVQAFDLDANHIPDAAMTLAIVALATRQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLISLLGVPVVINDPKCTHKTFPTYFEVFSSLTETAE"
     gene            complement(2454..2987)
                     /locus_tag="AABD07_001540"
     CDS             complement(2454..2987)
                     /locus_tag="AABD07_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFB2356035.1"
                     /translation="MFSPDKTLFLCLGALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIGRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGAHRYSHVGLYIGNGEFIHAPGSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
     gene            complement(3044..4570)
                     /locus_tag="AABD07_001541"
     CDS             complement(3044..4570)
                     /locus_tag="AABD07_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HFB2356036.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVLLDNI
                     LQIRHTPHNNGLSDIYLLDDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     MYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDNPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDKHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
     gene            complement(4682..6223)
                     /locus_tag="AABD07_001542"
     CDS             complement(4682..6223)
                     /locus_tag="AABD07_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HFB2356037.1"
                     /translation="MIFDNNYHYNAMPIRLLVNIQDADSAGIQTASENNNGTRMGYNH
                     PMEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADLNESPPDMQQAVVA
                     YTLTVALLIPLSSYLADKFGTKKVFFGSIAVFMLGSALCAASGSLFELTLSRVVQGIG
                     GSMLVPIPRLTILRVYEKSKLLNAINYAVMPALIGPALGPLAGGYLVEYASWHWIFLL
                     NLPIGLLGFVLGRNIMPDVKGNDTALDFKGYLTFSVAACLLLLAAESLSHALPPYFAL
                     LPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFSRLGISSIPFLMPL
                     MFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLLWNTKLLAAFIMLL
                     ALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGSGNSLMAVNQQLAI
                     SVGIVAGALILKNWTFLIPASSGLHFAFRMTLLSIGGITLASSLVFKRLHVSDGANLT
                     RGTRP"
     gene            6371..7150
                     /locus_tag="AABD07_001543"
     CDS             6371..7150
                     /locus_tag="AABD07_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HFB2356038.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAIALIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHH
                     WPTLFKNTEYESKAVDCANRIIEFTHFLLAIGYKPEDKGEPVKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKV"
     gene            7147..7848
                     /locus_tag="AABD07_001544"
     CDS             7147..7848
                     /locus_tag="AABD07_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HFB2356039.1"
                     /translation="MSARENILAKLKKAGALPMEEPAVFDYYREKGVSWDSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALAGSNID
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            7845..9299
                     /locus_tag="AABD07_001545"
     CDS             7845..9299
                     /locus_tag="AABD07_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HFB2356040.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHIRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIVITGIEKVVAKLSDVPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(9448..9867)
                     /gene="fitB"
                     /locus_tag="AABD07_001546"
     CDS             complement(9448..9867)
                     /gene="fitB"
                     /locus_tag="AABD07_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin FitB"
                     /protein_id="HFB2356041.1"
                     /translation="MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELR
                     LGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAA
                     ADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHD"
     gene            complement(9867..10103)
                     /gene="fitA"
                     /locus_tag="AABD07_001547"
     CDS             complement(9867..10103)
                     /gene="fitA"
                     /locus_tag="AABD07_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin FitA"
                     /protein_id="HFB2356042.1"
                     /translation="MASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQ
                     TVRLGSMLASIGQEIGGVELEDVRGRNTDNEVSL"
BASE COUNT         2459 a         2669 c         2820 g         2327 t
ORIGIN      
        1 ttattttgaa aaataatatt tcaatataaa acaataaatt aacttttttg aaaatgttgc
       61 tttcccgcaa catgatttaa atacagacct tgtcaaagcc gatgcggcgc agacccggat
      121 gccgtctcgt tttttaaaac accataaaaa aacacacgcg gtgctttaat ttcctgcgtg
      181 tgtcgagtgt atcgaaatca agccgaatca aatataccgg acttcgataa tgccgtattc
      241 gcgtacgccg cccggtgcct gaacttccgc cgtatcccct tcttccttgc cgatcagggc
      301 gcgggcaatc ggagagccga catagatttt gccctgtttg atgtcggctt cgtcttcgcc
      361 gacaatttga taggtaacgt gttcttccgt ttccaaatct tccagcgtaa ccgtcgtacc
      421 gaacacgatt ttgccttcgg cgtggatttc ggccggattg atgatgtggg caacggaaag
      481 tttgtgttcc aactcggaaa tgcggccctc gataaaacct tggcgttctt tggcggcttc
      541 gtattcggcg ttttcggaca aatcgccgtg cgatctggct tcggcaatcg cttcgatcac
      601 ttcgggacgc gccacgcttt tgagctgctg caattcctgt ttcagcaatt ccgcaccgcg
      661 tacggtcagg gggatttttt gcatcggtct ttttctccat attccggcac accggtttgc
      721 ggcggcaagc ataccgcgta ccgtcttgtt ttgtgcgtcc ggatattaaa ataaaaatac
      781 aagccgcccg gaaaatcggc ggcttgtctg tcgttgaaca gcggctattc taccaaattc
      841 tatgaaattg gcaatcgtgc cgtgccgccg gcaaacgcgc tatgtccgca acaaaagccg
      901 aaaatatgcc ggcaaaaaaa ttttagaaac aaaaaattta aaaaaaatca attttcggca
      961 taaaaaacca aattcacgta ctttaaaacc gaaaatgcca aacctgagat tttccagacg
     1021 gcatttgcac cagtataatg caggctgttt ttatctttat atttacgttt tgccatgacc
     1081 gaatccgtcc gcctccccgc cgcctcgctc aaaccttcca ccgtcgccct gcccggctcc
     1141 aaaagcatca gcaaccgcac cctgctgctc gccgccctgt ccgacaatgt ttgcgaaatc
     1201 cattccctgc tcaaatccga cgataccgac cgtatgctcg aagcactcga taaactcggc
     1261 gttcaaatcg aacatcttgc cgaaggccgt ctgaaagtac acggcacggg cggacgcttc
     1321 cccaaccgct ctgccgattt gtttttgggc aacgcgggca cggcgttccg tccgctgacc
     1381 gccgcgctgg ccgttttggg cggcgattat catctgcacg gcgtgcctcg tatgcacgaa
     1441 cgccccatcg gcgatttggt cgatgcgttg cggattgccg gcgccgatgt cgaatatctc
     1501 ggcaacgaac actatccgcc gcttcatatc ggcaaacgtc aagactgcgg cgagcgcgtg
     1561 attcctatta aaggcaatgt gtccagccag tttctgaccg ccctcttgat ggcgctgccg
     1621 ctgaccgggc aggcgtttga aatccgtatg gtcggcgagt tgatttccaa gccctatatc
     1681 gacattactt tgaaactgat ggcgcaattc ggcgtacagg ttgccaatga aggctaccgc
     1741 gttttcaaaa tccctgccga tgcgcactat cacgcacccg aacacttgca cgtcgaaggc
     1801 gatgcctccg gcgcgtccta cttcctcgca gccggtttga ttgccgccac gcccgtccgc
     1861 gttaccggca tcggcgcaaa cagcatacag ggcgatgtcg cctttgcccg cgaactggaa
     1921 aaaatcggtg cggacgtggt ttggggcgaa aacttcgtcg aagtctcgcg cccgaaagga
     1981 cgcgccgtcc aagcctttga tttggatgcg aaccatatcc ccgatgccgc gatgaccctc
     2041 gccatcgtcg cgcttgccac aaggcaaacc tgcacgcttc gcaacatcgg ttcgtggcgc
     2101 gttaaggaaa ccgaccgcat cgccgcaatg gcgaacgagt tgcgcaaact cggtgcaaaa
     2161 gtcgtcgaag aagccgaagc gattcacatt accccgcccg aaacgccgac acccgatgcc
     2221 gtcatcgaca cttacgacga ccaccgcatg gcgatgtgtt tctcgctgat ttcgctgttg
     2281 ggagtacccg tcgtcatcaa cgacccgaaa tgcacccata aaaccttccc gacttatttt
     2341 gaagtgttct catcactgac cgaaacagcg gaataaggcg gaaaaatgcc gtctgaaacc
     2401 cgaaaacagg gcttcagacg gcattttgcc gcgattccgg cgcggcgggc ggctcattct
     2461 gtaaaaaacg tatgcgctcc aaggtagttt ttggcgtaaa acggtgtgga gagtttttcg
     2521 gttttgatgg ttttgccgct gccgggggca tggatgaatt cgccgttgcc gatgtagagt
     2581 ccgacgtgtg agtagcggtg tgcgccgccg gtgttgaaga atacgaggtc gccggccttg
     2641 aggcggctgt cggggatttt gcggcttgcc gccgccatgt cgcgggcggt gcgcggcagc
     2701 ttgacgttga gggcgttttt gtaaacgaat tgaatcatgc cgctgcagtc gaagccggtt
     2761 gcggtgctgc tgccgcccca tttgtagggc gtgccgatga gtccgaggct gtggagcatg
     2821 agttcctgcg agccttgtgt gcggccgatg tggctgatgc ggacggcttg gatttgccgg
     2881 actgtctgtt tgggtttcgg ttggcggtgt ttgccggagg tcgtgccgca tgaggcgagg
     2941 agcagtgcgc cgagacagag gaaaagggtt ttgtcggggg aaaacatggt tttttccttt
     3001 gcgggttcgg atatgccgtc tgaaggtgtt tcagacggca tttctataat aaaccttcga
     3061 tgggcagcag ggataggatt tttgcggcga tgcgtttcca aagtttggct tcgggttcgt
     3121 tcgggtaggt ttttcgggtg gcgggatcgt gccattgcag gcggttgtgt ttgtcgaggg
     3181 taacgcggta ggcgtattcg ggtgtggtat cggcgagggt gcgctccatc tgttctgcga
     3241 ttttggggct ttcgatgacg acgcccattt cggtattgag ccgtgcggaa cgggggtcga
     3301 ggttgaatga gccgatgaag atgcgtttgc cgtccacaat gaaggttttg gcatgcaggc
     3361 tggttacgga gctgccggtc aggcctttgt cttttgtggc ggggacggca tggttgggtt
     3421 gcagctcgta gagtttgatg ccggctttga gcagcggttt tcggtatttg acgtagccgg
     3481 aatggacggc ggcaacgtcg gtcgcctgta gcgagttggt caggacggta acgtctatgc
     3541 cgtcctgcac cagttttgcc agtgcgtctg tgccggattt tgtagggacg aaatagggtg
     3601 aaaccagata gacgcttttt tcgggctgtt tgagcgcgtc ttgcagcctc ccggcaatcg
     3661 gcggtttgcg gcggtcgcgg tcgagtcctt ttgcagggtt gtcgctgatc aggcgggttt
     3721 ggacgctctg ccagtcgatg cgtcccgtct gtattttttg gtagaggggc gactgttcga
     3781 cggtttcgcg gtagcgcagg agcgcgtgtc tggatgtttc gtcgttgtat ccgagtgctt
     3841 gaagaccctt gccgatgttg ccgctgcgga tgatgcgcgt ggcgttgtgg gcggaatggc
     3901 ttgcccagta gcggtcgaag tcgtgcgata cttcgccgac gacgctgccg gtggcgagga
     3961 tgtccaggtc ggcgaaaacg gtgtcctcac cgactttgaa gtattcgtcg ccgatattgc
     4021 gtccgccgag tatggtggcg cggttgtcgg cggtaaagga tttgttgtgc atgcggcggt
     4081 tgaggcgggg gaagtcggtc aggtagccga gtgcgcgcca tttgcgtagg acgaaggggt
     4141 tgaacaggcg cacttcgata ttgggatggc tgtcgagggc gagcaggaga tcgtccaacc
     4201 cgcgcgtgtt gttgtcgtcc aacagcaggc gtacgcgcac gccgcgttct gcggcaaggt
     4261 acatgaggtt gaacagcagc ctgccggaaa tgtcgttgcg ccaaatgtag tattgcaaat
     4321 cgaggctgtg ttcggcagat tcgataaggg cggcgcgggc ggcaaaggct tcgtgggggt
     4381 cgtcgagcag gtagatgtcg gatagcccgt tgttatgagg ggtgtgccgg atttgcagga
     4441 tgttgtccag gaggacaggt ttggaagtat tgaaatgacg gctttccgtc cgttcttcca
     4501 gtgggggcaa ccatgaagaa catgaacaga gaaggaggca taaaagggaa atgaggctgc
     4561 gtgttttcat cggggatata gtttcagacg gcattgcctg tattttgggg tctgtatgca
     4621 ttgaaatgaa gcatcataat ctaaaggttg gaatgggtaa aagttttgtc gggatgcggg
     4681 gttaaggccg cgtgcctctt gtcaggtttg caccgtctga aacgtgcaga cgcttaaaaa
     4741 ccaacgacga ggcaagggtg atgccgccga tactgagcag ggtcatacgg aaggcgaaat
     4801 gcaggcctga agaagccggt atcagaaatg tccagttttt aaggattaat gcgccggcaa
     4861 caatgcccac gctgatggca agctgttggt tgaccgccat caggctgttg ccgctgccgg
     4921 tctgttgcgg gcgcaaatcg gcgagggtca gtgtgttcat ggcagaaaac tgtagggagt
     4981 tgcatgcgcc gatcgccagc gagaggaaaa tccaaatcca cagcggcgag tttccgtcag
     5041 gcagggcgag cagcatgatg aaggcggcaa gcagcttggt gttccaaagc agtaccgtgc
     5101 ggtagccgaa acgtttcatg agcggtgcaa tcagcggttt gaccagcagc gaagacaggg
     5161 cgacgggtgc gaccagccag cccgacaggc ttgcgccgaa gccgaaagcg acttgaaaca
     5221 tcaggggcat cagaaaagga atcgagctga tgccgagacg gctgaacaga ttgcccgcca
     5281 gtcccaaacg gaaggtgcgt atcagaaaca ggtcggcgga ataaatcggt ttggacgcgg
     5341 ttttcatatg tcggaaataa cggcgtgcaa acagcagtcc gccgcacagc ggtaacagtg
     5401 caaaatacgg aggcagcgcg tgcgacaggc tttctgccgc aagcagcagc aggcaggcgg
     5461 caacggaaaa ggtcagatag cctttgaaat ccagagcggt atcgttgcct ttgacatcgg
     5521 gcatgatgtt gcgtcccaat acgaaaccca gcagaccgat gggcaggttg agcaggaaaa
     5581 tccagtgcca cgaagcgtat tcgaccagat aaccgcccgc cagaggtccc aacgcagggc
     5641 cgatcagtgc aggcatgacc gcataattga tggcgttgag cagcttcgat ttttcatata
     5701 cacgcaagat ggtcagacgc ggtatcggaa ccagcatcga accgccgatc ccctgaacga
     5761 cacgggaaag cgtcaattca aacagcgaac ccgatgcggc gcacaatgcc gatccgagca
     5821 taaaaacggc aatcgaaccg aaaaagactt ttttcgttcc gaacttgtcc gccaaataac
     5881 tgctcaaagg aatcagcagg gcaaccgtca gcgtataggc aacgactgcc tgttgcatat
     5941 ccggaggcga ttcgttcagg tcggcggcaa tttcgggcag tgcggtattt aaaatggtcg
     6001 catccaacat ctgcataaaa atggcaattg ccagcagaag cggcagccaa ggggatggtg
     6061 cgcgggcgga cagggtgttt ttttccatag ggtgattgta ccccatcctt gtgccgttat
     6121 tgttttcaga tgctgtctga atgccggcag agtcggcatc ctgaatgttc acaagcaaac
     6181 gaatcggcat tgcattgtaa tgataattat tatcgaaaat catcagagta aggtacagta
     6241 agcgttatgg ggcagtttgt aagaaaaacc ggattatttt ttaaaattag acttgacccg
     6301 caacggtcaa ttacttaaag taaacgctta cctttctaca gaaaaaacgg gtctcccgtt
     6361 atcaaaaaat atgagcgcaa ccattccccc aaaaatcatc cgatacgaca gcaatccgac
     6421 agatgtctat tttttcggca cttgcgtcct tgatcttttt atgcccgaag caggcatgga
     6481 tgccattgcc ctaatcgagc agcagggcat acgcgtccat ttcccgatgg cgcaaagctg
     6541 ctgcggtcag cctgcctatt catccggcca tccgaccgaa gccttcgatg tcgccaaagc
     6601 gcaactcgac cttttccccg aaaactggcc gattgtcgta ccgtccggct catgcggcgg
     6661 catgatgaaa catcactggc ctaccctgtt taaaaataca gaatacgaat ccaaagcggt
     6721 tgattgtgcc aaccgtatca ttgagtttac tcatttcttg cttgccatcg gctacaagcc
     6781 tgaagacaaa ggcgagccag tcaaagtcgc cgttcacact tcctgtgccg cccgccgaga
     6841 aatgaatgtc catctttcag gctggcagtt gattgacggt atggaaaacg tcgaacgcat
     6901 cgtccacgac cacgaaagcg agtgttgcgg cttcggcggc acattctccg tcaaacaagc
     6961 cgatatttcc ggcgcgatgg taaccgacaa agttgccgcg ctgaaagaaa ccggcgcaac
     7021 cgaaatcatc agcgcggact gcggctgtat gatgaacatc ggaggcaaaa tcgccaagga
     7081 cgagccggat atgccgcgtc cgaagcatat cgcatccttc ttgttggaac gcaccggagg
     7141 caaagtatga gcgcgcgcga aaatattttg gcaaaactga aaaaagccgg cgcattgccg
     7201 atggaagagc ctgcggtttt tgattattac cgcgaaaagg gcgtttcttg ggacagcgaa
     7261 gccgagcgtc tgaaacattg ggctgccgcc atgcgcgcgg tcaaaaccga aatctattgg
     7321 gtgacgaaaa gcaattggat gcaggttttc cgcgaagcgg cagaaggcaa gggtttaaaa
     7381 aacatcctgc tgcccttggc aaccgaacac ggacaaattg cccgtgccgc attggcgggc
     7441 agcaatatcg acccgattgc cttcgagcgc gaaatcgata cttggaaaac cgagtttttc
     7501 acgaacatcg atgcaggctt cagcggcgcg caatgcggca tcgcccgcac cggcacgctg
     7561 atgctgtttt ccagccctga agaaccgcgt actttgagcc tcgttccgcc cgtgcatttc
     7621 tgcctgttcg atacgtccaa gatgtacaac gagtttcaca acgccgtcga aggcgaaaaa
     7681 ctggtggaaa acggtatgcc gaccaatgta ttcctgattt ccggcccgtc caaaaccgca
     7741 gacatccagt tgacgctcgc ttacggtgcg cacggtccgc gtgatttggt catcctcgcc
     7801 attttgcccg accacatttc ccctgccgat ttggaggaaa acgcatgact acgcaaacca
     7861 tcaagttcca catgaagccg gaaactttca aacaaaacgc cgcaatttcc cttcaagaca
     7921 agcccttgcg taaaagcctg cgtaccgcga tggatatgct gatgaccaag cgcaaagccg
     7981 ttttgaccga cgaagaagag ttgcaaagcc tgcgcgattt gtgcgaacac atccgtcagc
     8041 gttccctctc caaattaccc gcgctgctgg agcagttgga agaaaacctg actaagttgg
     8101 gcgtgaaagt acactgggcg gaaacccctg ccgaagcctg ccaaattatc cacgacatca
     8161 tcacagccaa aaacggcaag ctgatggtca aaggcaaatc catggtcagc gaagaaatcg
     8221 agctgaacca ttatcttgaa gcaaaaggca ttaaggcggt ggaaagcgac ttgggcgagt
     8281 ttatcgtcca aatggcaggc gaaaaaccga cccatatcgt gatgcccgca atccataaaa
     8341 ccaaagaaca ggtcagcgaa ctgttccacc aaaacctcgg cacaccgctt acagacgacg
     8401 tggaccaact gaccggattc gcccgcaaag ccctgcgcga tatttacagc actgccgatg
     8461 tcggcttgag cggcgtaaac ttcgccgttg ccgaaacggg cacgctgtgt ctggtcgaaa
     8521 acgaaggcaa cggccgcttg agtactaccg ttccgcccgt acatatcgtc attacgggta
     8581 ttgaaaaagt tgtcgccaag ctgtctgatg ttccgccttt gtacagtctg ctgccgcgtt
     8641 ccgccatcgg tcagaacatt accacttatt tcaatatgat taccggcccg cgccgcagtg
     8701 aagaattaga cggtccgcag gaaatgcact tggttttgct cgacaacggc cgcagccaag
     8761 cttatgccga agaccaaatg cgccgcaccc tgcaatgtat ccgttgcggc gcgtgtatga
     8821 accattgccc ggtttataca cgcatcggcg gcgcggcata cggcacaacc tatcccggtc
     8881 cgattggcga gattatttcc ccgcacctgt tgggtcttga tgccacccgc gacctgccga
     8941 ccgcctgcac gatgtgcggc gcgtgcgtgg aagtttgtcc ggtacgcatc ccgattaccg
     9001 aacaaatgca acgtttgcgc gttgaagcac aacgttcgcc gaccgaaacc gtgccgcacc
     9061 ccatccgagg gcaaggcgca tcgcatacct tcggcgaaca aatggcgtgg cgcacattca
     9121 acggtatttt cagcggtagc aaaacctacc gcgccttcgg ttgggcagcc accaagttcc
     9181 gcaatctgac cccgcgcaaa cagttgggtt ggacgcaaaa ccgcgtaccg atgaaaccgg
     9241 cgaagaaaac cctgcacgaa ctgatggcgg aaaaaatgcg ccaaaaagaa caggcataaa
     9301 aagttgttcg caaaaatacc gtctgaaacc cgaaaacagg gcttcagacg gcctgaaaag
     9361 cagcctgaac gcgcaaaaat aaataatgaa acggaatgct aagacgcttt caggcagcct
     9421 gacattaagg ctgcttaaaa gcgtctttta atcgtgccac ggattgaaca ccgcgacatc
     9481 ggccgcaaaa aatgagccgg tatcacgcgt agcaactgtc aaactgtgct gttttgcagt
     9541 ggcggcaata tagccgtctg cggcagcaat ctctttgcca tgtgttttgg cataggaacg
     9601 aatttgcgca tagattgcgg caaccggttc atcaaaaggc agaatccgcc ccgcaaataa
     9661 aggcaaaatg gattgttcca aacgttcgtg cagcacattc tttttcttgc cattgagcaa
     9721 caacgccaca cccaaacgca attctgcaac agtaatggca gacaaataca catcttccaa
     9781 tatcaaacta tccaaccatg ccaccacacg ttcattgggt tgtgggcgca aaggttcgga
     9841 aatcacattc gtgtccagca aaatcatcac aaagaaacct cgttatcagt attacgaccg
     9901 cgtacgtctt ccagctcaac acctccgatt tcctgcccta ttgatgccaa cattgacccc
     9961 aaacgtacag tttgttgtgc tttggcgatg ttatccaaaa ttaagcggat ttctgcttcg
    10021 gtactgcgcc ctgcggctcg cgcacggaat ttgattgcgt tgtgcgtggc ctcggataaa
    10081 tttctaatca caacagaagc cattgccttt ccttcctgaa aaaagttttt caaatgctat
    10141 caaaataaaa aaaatgatag caatctattt tttaacgcct gcggatgcct gaaaattcag
    10201 gtggccgcag gcgttttttt acatctaaaa aaacgtctcc cctccctctt tctgataaat
    10261 aaaaaacagt cgctc
//
LOCUS       DAWXHA010000080         9878 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.080, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000080 DAWXHA010000000
VERSION     DAWXHA010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9878
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.080"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(59..253)
                     /locus_tag="AABD07_001548"
     CDS             complement(59..253)
                     /locus_tag="AABD07_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HFB2356043.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMNK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(243..2324)
                     /locus_tag="AABD07_001549"
     CDS             complement(243..2324)
                     /locus_tag="AABD07_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HFB2356044.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMTVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRHIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLNFPVDAATLLHTAKEVGENTILSRTGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVALVPAVGVLLVTCYAGLQKLFHNDPRASFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVTVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEEQSEA"
     gene            2847..3227
                     /locus_tag="AABD07_001550"
     CDS             2847..3227
                     /locus_tag="AABD07_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor"
                     /protein_id="HFB2356045.1"
                     /translation="MNIRFFALTVSVLSLAACAVPEAYDGGGRGYMPPVQNQAGPDDF
                     RAFSCENGLSVRVRNLDGGKIALRLDGRRAVLSSDVAASGERYTAEHGLFGNGTEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3363..3851)
                     /locus_tag="AABD07_001551"
                     /pseudo
     CDS             complement(3363..3851)
                     /locus_tag="AABD07_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CdiI family contact-dependent growth inhibition
                     immunity protein"
     gene            4183..5616
                     /locus_tag="AABD07_001552"
     CDS             4183..5616
                     /locus_tag="AABD07_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HFB2356046.1"
                     /translation="MNEYSQLIKHPDISLSPISDGIGVGNPATGEISAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKSLTEARGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALAVLAYEAGVPQDLLPVVSGRASEISHEFATNP
                     TVRKISFTGSTEVGAKIFAGSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYVQSGIYDVFCRKLSEKAAALKLGDGLDEGVNQGPLIEEKAVEKV
                     EQHIADALSKGAVCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTSDTARQWRVGEVLEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCIDAG"
     gene            5727..6512
                     /locus_tag="AABD07_001553"
     CDS             5727..6512
                     /locus_tag="AABD07_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HFB2356047.1"
                     /translation="MMENGKTFPRWRFALKSAGWHLLISLLVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALAYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEKIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIIP"
     gene            6880..8436
                     /locus_tag="AABD07_001554"
     CDS             6880..8436
                     /locus_tag="AABD07_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HFB2356048.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARITGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFAVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESV
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQYAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDGTTALGALELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLEAIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDTDFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            8453..9199
                     /gene="surE"
                     /locus_tag="AABD07_001555"
     CDS             8453..9199
                     /gene="surE"
                     /locus_tag="AABD07_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HFB2356049.1"
                     /translation="MNVLISNDDGYLAEGIAILARVASEFANVRVVAPERDRSGVSNS
                     LTLDRPLQLKQAQNGFYYVNGTPTDCIHVGQFALPDFKPDVVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGMPAVAFSLNDASGRYWATAEKALWTLLAHFFKKPPSAPVLWNVN
                     IPAVAPEDVRGIKITRLGRRHHEQNIVPSRNPRGEQIYWIGPVGEVSDREEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHTD"
     gene            9301..>9878
                     /locus_tag="AABD07_001556"
     CDS             9301..>9878
                     /locus_tag="AABD07_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFB2356050.1"
                     /translation="MLKQTTLLAACTAVAALLGGCATQQPAPVIAGNSGMQTVSSAPV
                     YNPYGATPYNAAPAANDAPYVPPVQTAPVYSPPAYVPPSAPAVSGTYVPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAPKTAAVE
                     SRPAVPAAAQTPVKPAAQPPVQSAPQPAAPAA"
BASE COUNT         2286 a         2544 c         2780 g         2268 t
ORIGIN      
        1 ccttattata aaaataccgt ctgaagtggc gttcagacgg catttgtttc aagcggggct
       61 aacagcagcg tccgccgttt gcgccgcagc ggcgtttgcg gcaatagtct tgaaattgca
      121 gcttgttcat cacgggggcg ttgggattat gtttacgttg ttgtgcaacg tagttttcat
      181 aatcgggcac gcctgccatc aagtttgccg tcagcttgat ggttttccac caagacgcga
      241 gcttatgctt cactttgttc ctccggttgt ttgccgtcgc ggtacaccgc cgggatttct
      301 ttggcggtcg gccagccgac tttgcgtgct ttgagggcgg tacgcaaacc gtacgcggca
      361 acagtcacga caaccgacaa gaagaggatg gtcagaccgg cattaatctt gtcgttgaag
      421 atgatttgcg ccatttcgcc gatgtcttta gcgggcgcaa ggacttcgtt tttagccaat
      481 gcgtcgctgt atttgcctgc gtgggcaagg aagctggcgc gcgggtcgtt gtggaacagt
      541 ttttgcagac cggcgtagca ggttacaagc agtacgccga cggcaggaac gagtgccacc
      601 cagacataac ggtcgcgttt catcttaatc agcacaacgg cacacataat caaggctacg
      661 cctgccagca tttggttggc gatgccgaat aaaggccaga gcgagttgat gccgcccagc
      721 gggtcggtta cgccggtgta gaggaagtag ccccacaatg ccacggcgaa gaaggtcgca
      781 atcaggttgg cggggatgga gtcggtgttg ccgaaaggtt tgtagaagat gctgcccaag
      841 tcttgaatca taaaacgtgc gacgcgcgta ccggcatcga cggcggtcag gatgaacaag
      901 gcttcaaaca acagggcgaa gtgataccag aatgccatca tcgcctcgcc cggaatcaga
      961 cggctcataa tgtgcgccat accgactgcg agggtaggcg caccgcctgt gcgggacagg
     1021 atggtgtttt cgcccacttc cttagcggtg tgcaacaggg ttgcggcatc gacagggaag
     1081 ttcagcttgg tggtaattac ttcggcggcg gtgttggcat ccgtaccgat cagtgcggcg
     1141 gggctgttca tcgcgaaata cacgccggga tcgagcgatg cggcggcggc aagcgccata
     1201 atcgccacga aactttccat caacataccg ccgtaaccga tcatacggac gtgggtttcg
     1261 ttttccagca ttttcggcgt ggtgccggaa gaaatcagtg cgtggaagcc cgaaaccgca
     1321 ccgcaggcga tggtaatgaa caagaacggg aacaatgcgc ctgagaatac cgggcccgaa
     1381 ccgtcgataa agtgggtaac cgcaggcatt tgcaaagcgg gattgacgat gacgataccc
     1441 aaagccaagg ccgcaatcgt accgattttc aggaaggtgg agagatagtc gcgcggggtc
     1501 agcaagagcc agaccggcaa aaccgaagcc acgaaaccgt aaatcataat cgcccaagtg
     1561 agctggatgc cgtcaaggtc aaaccaatgc ccgatggagc ttttcgccac atcttcgccg
     1621 taaattaccg ccaacatcag caaaataaag ccgacgatgg aaatctcgcc gattttgccc
     1681 ggacggatat ggcgcgtgta aatacccata aacagcgcaa tcggcatcgt tgcggcaatg
     1741 gtgaacgtac cccaagggct gtgaaccaat gcttttacga caatcaacgc caaaaccgcc
     1801 ataatgatga ccataatcat caaaataccg atggaggcaa tcacgccggg gacagtgccg
     1861 agttcctgtt tcacaatatc gcccaaagac ttaccgtcgc ggcgcataga gacgaacaag
     1921 accgtcatat cctgtaccgc gccggcaaat accacgccga agataatcca caaagtaccg
     1981 ggtagataac ccatttgcgc cgccaaaacc ggaccgacca aagggcccgc gccggcaatc
     2041 gcggcaaagt ggtgtccgaa caatacgcct ttgtgcgtcg gaacgtagtc caagccgtcg
     2101 ttgtgccgct cggcgggcgt gagacggttc ggatcgagcc gcatcacgcg gttggcgatg
     2161 tagaggctgt aaaaacggta ggcgatacag taaacggata tggcggcggt aaccatccat
     2221 accgcgctga cctgttcgcc tcggctgagg gccagagtgg taaaggatgc taagccgacc
     2281 agtaccacta tgccccaaat gaggaaggtt ttgagtgatt tcatcgaata aatccttatc
     2341 tcacactgtc ggaatatgtc ggagcggaca ggcaacggtt ggctacccgt aatccgatgc
     2401 cgacacaaac cggagtttga atgattgacg aagtatgaaa cagtgcgctt gtcgggactt
     2461 gtgccttatg cccgcatcaa acagtgcagg aatgtacgcg cacaaacgtt aaacgccgaa
     2521 taggatttta acgcaaatta gcacactgat atcggttttt acttggaatt tggaaaaatt
     2581 tacattcctc cgggcgggca ggcaggttca gacggcatcg tcaggcaaaa ggcggtgtcg
     2641 gaagacgggt aaagaagggg cgcgcaatcc ggattattga tttatcgtgt ttccttttcg
     2701 gttgaacctc agccctttgg ggcggtaaaa tcagacttta tttgggaggg gcgcaacccc
     2761 ttccgaatca ggacggcaca tagggcggtg ctttaatgtg tcgtcctgtg tgttgaaaca
     2821 tattttcttt ttattgggga gcttttatga atatcaggtt tttcgcgctg accgtatcgg
     2881 ttttgtcttt ggcggcctgt gccgtgccgg aagcgtatga tggcggcgga cgcgggtata
     2941 tgccgcctgt tcaaaaccaa gccggcccgg acgattttcg agcgttttca tgcgagaacg
     3001 gtttgtctgt gcgcgtccgc aatttggacg gcggcaaaat cgcgttgcgg ctggacggca
     3061 ggcgtgccgt cctctcttcc gacgttgccg catccggcga acgctatacc gccgaacacg
     3121 gtttgttcgg aaacggaacc gagtggcacc agaaaggcgg cgaagccttt ttcggcttta
     3181 ccgatgccta cggcaattcg gtcgaaactt cctgccgcgc ccgttaaacg gggcagcctg
     3241 tttgaaccgc cgtccggatt tttcgggcgg ttttttatgc cggttttgtt ttggccgtcg
     3301 gctggttccg gcggttttcg ggcgtggcgg attatttttc gtttcgttct gggtttatcc
     3361 tgtcggcagc ggctcaatgc caactttaaa cctgctccga tttcttcagg gctgttatcc
     3421 aatgataaaa ttacatcgtc tgcatcaatg gcatcccacg cttccggctt gacatggcgg
     3481 ctcgggctga ttttcaggca gccgttgtgc agccaaatat ccccgctcat catgttttta
     3541 aatagggcgc gtctggtttt atagcccaag ttcccgcata ggttggcaac ccaatcctca
     3601 tagcgttgcc gaaatttttc ggtatcaaaa aaatcttggt cttccgaact gtcataaacg
     3661 aaagtcctgc tgtttgccaa cgcttgcaag accgtcgtgc ctaaagtttc attgtcggta
     3721 tccaatggca ggatatgggg ggatataggt ggtctattgc cgttaacccc aaacctgaac
     3781 atgtttgaac aatcagagct tcttcattag cataaaaaac tgcccaataa ttgatcctgt
     3841 ttaaaaatca ttatttaatc tccgtaattt tgactgtaat gttttgactt ttgccatact
     3901 ctaccacgcg ttgtaactgc aatctttgct tcttatatat tgtaccctat caaagggctg
     3961 cattactttt ctttctaaag attactatcg cataaaaagt atttttctta aacgacaggg
     4021 atgcgcccgt gccatattca aacaccgccc ggatgttgcg ctgcccgatc ggatgcttca
     4081 gacggcatcg gaagggtttg cagttttgga atatgaagat gataatgtcc gcgagattga
     4141 cggcatttga aagcggttat cccgtatacc ggaggacacg aaatgaacga atattcccaa
     4201 ttaatcaagc atcccgatat ttccctttcc ccgatttcag acggcatcgg ggtcggcaat
     4261 ccggcgacgg gcgaaatttc ggcgtatgtc cgcaacacgg gttcggacaa gctgaaaaac
     4321 ctgattcaaa aggcggcggc agcgcaaaaa ttatgggcgg cgaaaaccgc cttggaacgc
     4381 gccgacatat tgtggcgttg gtatttttta gttaaagaaa acaaagaagc actggcgcgt
     4441 ctcatgacga tggagcaggg caaaagcctg accgaggcgc gcggcgaaat cgattatgcg
     4501 gcttcgtttg tgcgctggtt tgccgaagag gcgcggcgga ttgacggcga tgtgctgacg
     4561 agtgtgaaag cgtcgcaaaa actggttgtg ttgaaacagc ccgtcggcgt taccgctgcg
     4621 attacgccgt ggaatttccc gtccgcgatg attgcgcgca aggccgcgcc tgctttggcg
     4681 gtgggctgcg cgatgatagt caaacctgca tcgctcacgc ctttgagtgc gtatgcgttg
     4741 gctgtactgg cctacgaagc gggcgtgccg caggatttgc ttcccgtcgt cagcggccgc
     4801 gcttcggaaa tcagccatga atttgccacg aacccgaccg tgcgcaaaat cagcttcacc
     4861 ggctcgaccg aagtcggcgc gaaaattttt gccggcagcg cggcggacat taaaaaactc
     4921 agtttggaac tgggcggcaa cgcgccgttt atcgtgtttg acgatgccga tttggacaaa
     4981 gccgtcgaag gcgcgctggc gagcaagttc cgcaacagcg gtcagacctg cgtctgcacc
     5041 aaccgcgttt acgtccaatc gggcatttac gacgtatttt gccgcaaatt gagtgaaaag
     5101 gcagccgcgc tcaaattggg cgacggcttg gacgaaggcg tgaaccaagg accgctgatt
     5161 gaggaaaaag cggtagaaaa agtcgaacag cacatcgccg atgcactctc caaaggcgcg
     5221 gtctgtctga ccggcggcaa acgcagcgcg ttgggcggaa cgttttttga gccgactgtc
     5281 ttaagcggcg ttacggcgca aatggcggta gctcgcgagg aaaccttcgg gcctttgtgt
     5341 ccggtgttcc gttttgaaac cgaagccgaa gtcatcgagg ctgcgaacaa tacggaatac
     5401 ggtttggcag cttacctttt cacctccgac accgcccgtc aatggcgcgt cggcgaagtc
     5461 ttggaatacg gcatggtcgg catcaatacg ggcttaatca gtaatgaagc ggcaccgttc
     5521 ggcggggtga aacgcagcgg tttgggacgt gaaggcagca aatacggtgc ggacgaatat
     5581 ctagaattga aatatttgtg cattgatgcc gggtgacgga tgccgtctga atggcagggt
     5641 ttcagacggt gtcgcatttt aagcagtctc tatctgttgt acaatgcgcc ctgtttttac
     5701 ggttattttt gatttgaatg taagatatga tggaaaacgg aaaaacattc ccgagatggc
     5761 gttttgcctt gaaaagtgcg ggctggcacc tcttaatcag cctattggtt gcagggctgg
     5821 cggcattgct ggtttttaag gtttggtatc cttatcctta tgccgagctg acgggcggtc
     5881 tgtcgcttta tcagctggtg gtggcggtcg atatcgtatg cggcccgctg ctgactttaa
     5941 ttttggcaag cccgaagaaa aagacaaagg cacgcatggt cgatttttcc atggtcggca
     6001 tcatccagct ggcggctttg gcgtacggtt tgcacagcgt ttcgctggcg cgtcccgtgg
     6061 tggaagcgtt tgaacaggac cgcatgacca ttgttacggc ggcggaagtc gtggtcgaag
     6121 atttgcacaa agcccccgaa gggctgcaaa gcctgtcgtg gttcggcatc cgccgcattg
     6181 cattgaaaga acctgaggat gcggatgaga agaacaagac gctggatttg tccctgaaag
     6241 gtatcgagcc gagtatgcgt cccgaccggt ggctgccgta ttccgacaag gaagcagaaa
     6301 aaatccgcaa acatctgaaa ccgctgaaag tcttggcgga tgcgagaaaa acgacggttg
     6361 cggacattct gaaacaggca ggtctcgccg aaggggagga gctgtattac ctgccgttta
     6421 ccagcagcag gcagaaagag tggatagtca ttaccgataa agagggcaac accaaaggct
     6481 acgcgccgat agacggcttc atcatccctt aaccattggg attccgcccg cactcgaaca
     6541 tccgttcttc gcggcggtag aatcagactg tatttgagag gggcgcaacc cctcaatcag
     6601 ggcaacacat agggagacgc tttatgtgcc gtccgtgtat tgaaacattt caaaataagc
     6661 ccatgccgtc cgaacatcct ttcagacggc atggcgtttt gccattgccc cgataagctg
     6721 ttaaactgtt taaattattt cgaccgaagg tacacgcaca tgaaagaccc cgagcagagc
     6781 agtaagcccg cccgccgttt tttgtgcgta ccgtctgttc aggcagcttg agcgtttcag
     6841 gctgcctttt tgcgtttgaa cttgaggaac acgaaaatca tggatttcag ttggttggca
     6901 gaaccgcata cctggatagg ttttgccacg cttttggtgt tggaagtcgt attggggata
     6961 gacaaccttg tctttgtggc gattttggca aacaaggtcc agcccgcacg gcgcgaccgc
     7021 gcacggatta ccgggctggg gctggcagtc gtcatccgca tcattatgct tgcttttatg
     7081 gcgcatatca tcacgctgac cgaaccgctg ttccaaatcg gcggcctcgc cgtttccggc
     7141 aaggacatga ttatgctcgc gggcggtatt ttcctgcttt acaaagccac taccgaactg
     7201 cacgaacgcc tcgaagggca taaccggttt gccgttgccg acaaccaaaa aaaacacgcg
     7261 ccgttttggg gcgtggtcgc gcaaatcctg atactggatg ccgtgttttc catcgattcg
     7321 gtcatcaccg ccgtggcgat ggtcgatcac atcgtcgtgg cgatgggcgc ggtcgtcgtc
     7381 gcaatggctg tcatgatttc cgccagcaaa ctcttgaccg aatttgtgga caggcatccc
     7441 accgtcgtga tgctctgcct tggttttttg ttgatgatcg gtttcagcct gattgcggaa
     7501 gccttccatt tccacattcc caaaggctac ctctacgccg ccatcggctt ctcgatttta
     7561 atcgaactgt ttaaccagat ttcgcaacgc aacagccgca aaaacgacta catcggcagc
     7621 tcgtggcgca agcgcaccgc cgaaaacgtt ttgggtatga tgggcatacg cgaaagcgtg
     7681 cttgctgacg cgggcggcga atccgtggat gacgcgcatt ttgaagaaaa cgaaaaatcg
     7741 atgatacgca gcgtgctgac gcttgccgaa cgcccgatta tgggggtgat gattccacgc
     7801 cgcgacatcg aacggctgga catttcccaa agccgcgaag aacagtatgc ccaactgcaa
     7861 aacacgcctt acagccgcct gctcgttgtc ggaaaggcgg gcgtggacga accgttgggc
     7921 tacatcaaca aaaaagacct gctgtcccaa ctgctggaaa caggcggtct cgacattcag
     7981 acggcattgc gccagccgct cgtcctgccc gacggcacga ccgccttggg cgcgctcgaa
     8041 ctcttccgcc aaagcagcgc ggattacgct ttggtggtgg acgagttcgg cgcggtgttg
     8101 ggtatggtga cgatgaaaga cctgttggaa gccatcgcag gcgagttccc cgaagaattc
     8161 gagcgcgaag aagaacccgc cgttcagggg aatcccgatg aaagcctgac ggtggaaggc
     8221 gcgttggaat atgtggagct ggcatcccaa ctcaacctgc cgcagcagga ggaagatacc
     8281 gatttccata ccgttgccgg gctgattatg gaagaattgc aaaccatccc cgatgtcggc
     8341 gattttgccg attttcacgg ctggcggttt gaagtggtcg aaaaagaagg gcagcgcatc
     8401 gagcgggtca aaatcaccaa attgcccgaa gaataagcat ccaggataaa aaatgaacgt
     8461 tttgatttcc aacgacgacg gctatctggc agaaggcatt gccattctgg cgcgggttgc
     8521 gtcggaattt gccaatgtca gggtggtcgc gcccgagcgg gacaggagcg gggtcagcaa
     8581 ttcgctgacg ctcgaccgtc ctttgcagct gaaacaggcg caaaacggct tctactacgt
     8641 caacggcacg ccgaccgact gcatccatgt cggccagttt gccctgcccg attttaagcc
     8701 cgatgtcgtg ttttcaggta tcaaccgtgg cgcaaatatg ggcgacgata cgctttattc
     8761 ggggacggtt gcggcggcga ccgaagccta tctgatgggt atgcctgctg tggcgttttc
     8821 tttaaacgat gcttccggac gctattgggc aaccgcagaa aaggcactgt ggacattgtt
     8881 ggcgcatttt tttaaaaaac cgccgtccgc gcccgtcttg tggaatgtca acatccctgc
     8941 tgtcgcaccg gaagatgtca ggggaatcaa gattacccgt ttgggcagac ggcatcatga
     9001 gcagaacatc gtcccgtccc gcaatccgcg cggcgaacag atttattgga tagggccggt
     9061 cggcgaagtt tccgatcggg aagaggggac ggattttggt gaatgcggcg caggttttat
     9121 taccgtaacg ccgctgcaaa tcgatttgac cgcctatccg gacatggcgg agacggcggc
     9181 cttttggcat acggactgac cgtttttcaa ataccgtcgg gttttgcgct tgagaagaac
     9241 gcgcattttt attatgatat accgcattca ggctatatat cggaacatga aggttatctt
     9301 atgttgaaac aaacgacact tttggcagct tgtaccgccg ttgccgctct gttgggcggt
     9361 tgcgccaccc aacagcctgc tcctgtcatt gcaggcaatt caggtatgca gaccgtatcg
     9421 tctgcgccgg tttacaatcc ttatggcgca acgccgtaca atgccgctcc tgccgccaac
     9481 gatgcgccgt atgtgccgcc cgtgcaaact gcgccggttt attcgcctcc tgcttatgtt
     9541 ccgccgtctg cacctgccgt ttcgggtaca tatgttcctt cttacgcacc cgtcgacatc
     9601 aacgcggcga cgcatactat tgtgcgtggc gacacggtgt acaacatttc caaacgctac
     9661 catatctctc aagacgattt ccgtgcgtgg aacggcatga ccgacaatac gttgagcatc
     9721 ggtcagattg ttaaagtcaa accggcagga tatgccgcac cgaaaaccgc agccgtagaa
     9781 agcaggcccg ccgtaccggc tgccgcgcaa acccctgtga aacccgccgc gcaaccgccc
     9841 gttcagtccg cgccgcaacc tgccgcgccc gctgcgga
//
LOCUS       DAWXHA010000081         9842 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.081, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000081 DAWXHA010000000
VERSION     DAWXHA010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9842)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9842)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9842
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.081"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            116..2689
                     /gene="clpB"
                     /locus_tag="AABD07_001557"
     CDS             116..2689
                     /gene="clpB"
                     /locus_tag="AABD07_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HFB2356051.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGEILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDG
                     LQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPK
                     LGAQLQAAESNPDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEE
                     VLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFL
                     FDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVE
                     KAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKE
                     VVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD
                     AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIKVEADGDRLKF
                     A"
     gene            complement(2761..3975)
                     /locus_tag="AABD07_001558"
     CDS             complement(2761..3975)
                     /locus_tag="AABD07_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HFB2356052.1"
                     /translation="MDKFPKSAKLDHVCYDIRGTVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQNKGLRDITVNDVYIGN
                     GVSELIAMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITSKTKAIVVINPNNPTGAVYSKEILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHCHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIRDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYHQ"
     gene            complement(4064..4273)
                     /locus_tag="AABD07_001559"
     CDS             complement(4064..4273)
                     /locus_tag="AABD07_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HFB2356053.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVIELLARVLGKNPETTVV
                     VIDEVDTDNWDIGGKSVSERRKEGR"
     gene            4465..5271
                     /locus_tag="AABD07_001560"
     CDS             4465..5271
                     /locus_tag="AABD07_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HFB2356054.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVTAEYQ
                     PTFRSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDTT
                     DGKGEVDIIPLRQGFWKASVEYKADFPDQSLCQKQANYTTLTFQIGHSHH"
     gene            complement(5331..6550)
                     /locus_tag="AABD07_001561"
                     /pseudo
     CDS             complement(5331..6550)
                     /locus_tag="AABD07_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312236.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
     gene            6945..7655
                     /locus_tag="AABD07_001562"
     CDS             6945..7655
                     /locus_tag="AABD07_001562"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HFB2356055.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLVIITNKNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDAANMLMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDTTRPDRIIG
                     ALPEIYENLRPQKNKDEE"
     gene            7728..8189
                     /gene="recX"
                     /locus_tag="AABD07_001563"
     CDS             7728..8189
                     /gene="recX"
                     /locus_tag="AABD07_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HFB2356056.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEKTSRNLLPDRSSEKQAA
                     IAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC"
     gene            8577..9059
                     /locus_tag="AABD07_001564"
     CDS             8577..9059
                     /locus_tag="AABD07_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFB2356057.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRREISLQASGDVSCGC
                     "
     gene            complement(9457..>9842)
                     /locus_tag="AABD07_001565"
     CDS             complement(9457..>9842)
                     /locus_tag="AABD07_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFB2356058.1"
                     /translation="PSGTRSVGGIVWQRPTQGKVVADFGGGNKGVDIAGNAGQPVLAA
                     ADGKVVYAGSGLREYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTD
                     ASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT         2577 a         2748 c         2363 g         2154 t
ORIGIN      
        1 tttaaattca acaatatatc gaattaaata tagaaaaaca gaaaacaaca cttgagttat
       61 ccacagtcat gcacatatag gcttcgacag cggacatttt gaaaaggaaa cgaaaatgcg
      121 atacgacaaa ttaaccgcca aattccaaca agcccttgca gaagctcaga gtttggcgtt
      181 ggctgcggac agcagctatc tggaagcagg tttcgtactg aaagccctgc ttgacgacca
      241 aaacagcgga gctgccgcgc tcttggctca tgcgggcgtg aacgtgccgc aggttaaaca
      301 gcgtttgcag cagcatttga acagcctgcc gaaagtgtcc ggacaaggtg gtgagattct
      361 gcccagccgc gaattgcagg cggtgttgaa cctgatggac aaagcggcaa ccaaacgcgg
      421 cgatgcctat atcgccagcg aacttttcct gctcgccttg gtgcagcaga acgatgcggc
      481 cggcaaaatc ttgaaagaag ccggtgcgac cgaacaaaat atcaatgccg cgatcgatgc
      541 ggtacgaggc ggacaaaacg tgaacgatgc gaatgccgaa gaccaacgcg atgctttgaa
      601 aaaatacacg ctcgatctga cccaacgcgc ccgagacggt aagctcgacc ccgttatcgg
      661 tcgtgatgat gaaatccgcc gcgcgattca ggtgctgcaa cgccgcacca aaaacaaccc
      721 cgtgctgatt ggcgaacccg gtgtgggtaa aaccgccatc gtcgaaggtt tggcgcaacg
      781 catcgtcaac ggcgaagtac ctgaatccct gcgtaacaaa cgcctgctgg ttttggattt
      841 ggcggctttg attgccggtg cgaaataccg tggcgaattt gaagaacgct tgaaaggcgt
      901 attgaacgat ttggcgaaag acgacggcaa caccctgatt ttcatcgatg aaatccatac
      961 tttggtcggc gcgggcaaaa ccgacggcgc gatggacgcg ggcaatatgt tgaaaccggc
     1021 cttggcgcgg ggcgaactgc actgtatcgg tgcgactact ttggacgaat accgccaata
     1081 catcgaaaaa gacgcggcac tcgaacgccg tttccaaaaa gtattggtcg gcgaacccag
     1141 cgtggaagac accatcgcta tcctgcgcgg tttgcaggaa cgttacgaaa tccaccacgg
     1201 catcgatatt accgaccctg ctatcgttgc cgcagcggag ttgagcgacc gctacattac
     1261 cgaccgcttt ttgcccgaca aagcgattga tttgattgac gaagccgcca gccgcatcaa
     1321 aatggagctg gacagcaaac ccgaacagat ggacaaactc gaccgccgca tcatccagct
     1381 caaaatggaa aaaatgcacg ttgccaaaga aagcgatgat gccagcaaaa aacgtttgga
     1441 actgatagac gaagaaatcg acggcctgca aaaagaatac gccgatttgg acgaaatctg
     1501 gaaagccgaa aaagccgcgt cttccagcac tgccgacatc aagaaacaaa tggacgacat
     1561 caaagtcaaa atcgaacaag ccaaacgtca aggcgacttc gcccgcgcgt ccgaactcga
     1621 atacggcgag ttgccgaaat tgggcgcaca gttgcaggca gcggaaagca accccgacgg
     1681 caaaaaacaa aacaaacttt tccgtaccga agtcggcgcg gatgaagtgg ccgaaatcgt
     1741 ttcccgtatg accggcattc ccgtatccaa aatgatggaa ggcgaacgcg ataaattgtt
     1801 gaaaatggaa gaagtgttgc accgccgcgt agtcggtcaa aacgaagccg tgcgcgccgt
     1861 gtccgatgcc atccgccgca gccgctccgg ccttgccgat ccgaacaaac cttacggcag
     1921 cttcctgttc ttaggcccga ccggtgtggg taagaccgag ttgtgcaaag ctttggcagg
     1981 cttcctgttc gacagcgaag accacctcat ccgcatcgac atgtccgaat acatggaaaa
     2041 acacgccgtt gcccgcttaa tcggcgcgcc tccgggttat gtcggatacg aagagggcgg
     2101 ctacctgacc gaacaagtcc gccgcaaacc gtacagcgtg attcttttgg acgaagtgga
     2161 aaaagcccat cccgacgtat tcaacatcct gctgcaagta ttggatgacg gccgtttgac
     2221 cgacggacaa ggcaggacgg tagattttaa aaataccgtg attgtgatga cttccaacat
     2281 cggcagccag cacatccaac aaatgggcac gcaggactac gaagcggtga aagaagttgt
     2341 gatggaggat gtgaaagaac atttccgtcc ggaaatgatc aaccgcatcg acgaagtggt
     2401 cgtgttccat ggcttggatc aggccaatat ccgcagtatt gcgaaaatcc agctcaaagg
     2461 tttggaaaaa cgtttggaaa aacaaaacct gcgcctgact gtttccgatg ccgctctgga
     2521 catcatcgcc aaagccggtt tcgacccgat ttacggcgca cgtccgctca aacgcgcgat
     2581 ccaatcggaa atcgaaaacc cgctggccaa agccctgctt gccggaaact atgcgcccga
     2641 aagcgaaatc aaggtagaag ccgacggcga cagactgaaa tttgcctgat ttgttcctgc
     2701 tgttgaaaat gccgtctgaa acgggaatct ccgttccaga cggcattttt tatcagaatc
     2761 ctactgatgg taggtttgca ggaatcttgc caacctgccc atcgcctctt caatctgatg
     2821 gacgtaaggc agcgtaacaa tgcggaaatg gtcgggtttg atccaattaa accccgttcc
     2881 ctgtaccagc aggacttttt cgcgcaccag caaatcgtaa acgaatttca tatcatcgcg
     2941 gatgcggtac atttcggtat cgattttcgg gaacatatac atcgcgccca tcggtttgac
     3001 gcaggacacg ccgggaatct ggttgaccag ttcccacgct ctgttgcgct gttccaaaag
     3061 ccgtccgccg ggcaagatga attcgttaat gctctgataa ccgcccaatg ccgtctgaat
     3121 cgcgtgctgc atcggcgtat tggcacacaa gcgcatggac gagagcatat ccaaaccctc
     3181 gatataacct tttgcgtgat gtttcggccc gtttagcacc atccagcctt ggcggaaccc
     3241 ggctacacgg taggctttgg acaaaccgtt gaacgttacc gtcaaaaggt cgggggcgag
     3301 cgcggcgatg tggcagtgaa ccgcgccatc ataaaggatt ttgtcgtaaa tctcgtcggc
     3361 gaaaataatc aaaccatgct tgcgcgccag ttcggcaatt tccagcagga tttccttgct
     3421 gtacaccgct cctgtcgggt tattggggtt gatgacgacg atggctttgg ttttggacgt
     3481 gattttggct tccatatcgg caaggttggg aaaccagccg ttttcttcgt cgcacagata
     3541 atggcgtacc gtaccgcccg caagcgttgc cgccgccgtc cacaaagggt agtcgggcgc
     3601 gggaatcagg atttcgtcgc cgtcgttgag caacgcctgc atagacatcg caatcagctc
     3661 ggacacgccg ttgccgatat agacatcgtt taccgtaata tcgcgcaaac ctttgttctg
     3721 atagtagtga acaatggctt tgcgtgcgga atacaacccc ttcgaatcgc aatagccttg
     3781 cgaagtcggc aggttgcgga tgacatcgac taagatttca tcaggtgctt caaagccgaa
     3841 cggcgcaggg ttgccgatat tgagcttgag gattttgttg ccctcctctt ccaactgaag
     3901 ggcttttttg tgaaccgtcc cgcgtatgtc gtagcagacg tggtcgagct ttgcagactt
     3961 gggaaattta tccataatgt gttccgtaaa ttttgggcaa tgggtgggaa tgtactcttt
     4021 ttcacgcgga atttaaagca tcagggcggg gttttcaggc tttttacctg ccctctttgc
     4081 gccgttcgct gacgcttttg ccgcctatat cccagttatc ggtatccact tcgtcaatca
     4141 cgacaaccgt tgtttcggga tttttaccca gcacgcgtgc cagcaattcg attacgccgc
     4201 cgatcagttc cgctttttgc gcggcagtcg gtgcttcctt gccgccggtt actttaatat
     4261 tgacataagg catgatattt ctccgttttg aaatattgct atcttatcaa acaagttgcc
     4321 tccgcccaaa cgtccgcttc attttctgaa aaattcaaat cgatacaaaa agacagtttt
     4381 caggcggcaa atccgtcttc acacgataca tattttgtta tagcataaca aaatttttaa
     4441 cccgcacgat ataaaggctg caccatgaag aaaacattga cactgctcgc cgtttccgca
     4501 ctatttgcca catccgcaca cgcccaccgc gtctgggtcg aaaccgccca cacgcacggc
     4561 ggcgaatacc ttaaagccga cttgggctac ggcgaattcc ccgaactcga acccatcgcc
     4621 aaagaccgcc tgcacatctt cagcaaaccg atgcagctgg ttaccgaaaa aggtaaggaa
     4681 aacatgattc aacgcggcac atacaactac caataccgca gcaaccgtcc cgtcaaagac
     4741 ggcagctacc tcgttaccgc cgaatatcag cctactttcc ggtcaaaaaa caaagcaggc
     4801 tggaaacagg ctggcatcaa agaaatgcct gacgcaagct attgcgaaca aacccgtatg
     4861 ttcggtaaaa acattgtcaa cgtgggacac gaaagcgcgg acaccgccat catcaccaaa
     4921 ccggtcggac aaaacttgga aatcgtcccg ctggacaatc ccgccaacat tcacgtaggc
     4981 gaacgcttca aagtccgcgt tctgttccgt ggcgaaccgc tgcccaatgc caccgttacc
     5041 gctacatttg acggcttcga caccagcgac cgcagcaaaa cgcacaaaac cgaagcccaa
     5101 gccttctccg acaccaccga cggcaaaggc gaagtggaca tcatcccctt gcgccaaggc
     5161 ttttggaaag cgagtgtcga atacaaagcc gatttccccg atcaaagcct gtgccaaaaa
     5221 caggcgaact acacaacttt aaccttccaa atcggccatt ctcaccatta attccgtcca
     5281 aacaaaaatg ccgtctgaaa tggtttcaga cggcatcctt tgttcaaaca tcaataccag
     5341 ccgcgcagct tcatcgcttt ttcaacacgg cggatactca tcatataaga cgtggtacgc
     5401 aaatcgacat catactcttg cgccaagttc caaatatcgc ggaacgcgcg gcgcaggacg
     5461 acgatttctt tttcctgaac ttcgtcaaac tcccaataat agccttgcag gttttgcacc
     5521 cactcgaaat aggaaacgac cacgccgccg cagtttgcca aaatatcggg cacgaccaat
     5581 acgccgtttt gacgcaggat aacgtcggct tcgggcgtag tcgggccgtt tgcgccttca
     5641 accacgattt tcgcgcggac tttaccggcg ttttcggaag tcagctggtt ttccaatgcg
     5701 caaggggcga gtacgtccat atccaaagcc aaaagttcgg cgttggtaat ttctttgccg
     5761 taaccggctt tgttggtgat gaagcctttt tcttggaact ctttaaacag cgcttccata
     5821 tccaagccgt tttcattgta gatagcaacg tcaacagtag atacggtaac gactttcgcg
     5881 ccggattgat gcgcgtaata gccggtgtgg tagcccacat tgccgaaacc ttgaatggcg
     5941 taggttgcgc ctttcacatc tttgcccagt ttttccaaag cttggacggc ggcgaggttc
     6001 acgccgtaac cggtagcctc ggtacgcgcc aaagagccgc cgaactcaac cggtttgccg
     6061 gtaaatacgc ccggcgcgga atgtttcacc acgttttcat aggcatccac catccacgac
     6121 ataattttgc cgttggtgtt cacatcgggg gcgggaatat cgattttttt cgccgatcag
     6181 cggggcaatc gcttcggcat aagctcgggc gatgcgttcc agttccgcct cggaataatc
     6241 gcgcggatcc aaggtaacgc cgcctttgcc gccgccgtaa ggaatgcctg caacgcagca
     6301 tttgatggtc atccaaatcg acagtgcctt gacttcgtcc agattcacac cgggatggga
     6361 acgcacgcga acggtaaccg gtaaaggttt tgaccgtgcc gtcgtcgagt ttgacttcca
     6421 acacgcgggt cggactcttc aggatttcat aaacggccgg atcggttttc agccggtcgc
     6481 aggcggtttt gacctgtttt cgcgcgattt caaacggatt gagggtttct tttgcaacgg
     6541 catcagacat tttgcttcct tttcgcaaaa agattttcag gggcgtgcat ttcgctcatt
     6601 actataacca atttcccgac aaaacgtaat agcatgtagt cgacataagc ccgattttat
     6661 taatctatat atgattttat ttttcaagcc gcacagcatc cgtctgaaaa aagcagcgcg
     6721 catccgaaaa gcaaatgtcc aattaaataa agatatagtc atcattttat tttttaaaaa
     6781 tttaattgga acatcgccgg gatttcaaac ccttgccaga ccccgccata aaatccgaaa
     6841 acaccgcccg aaaaacctgt tgcgattgtt aataatctat acattagaag ccctgtgcaa
     6901 acgatgttaa aataaaccct ttcaacccga caggaaaccg gattatgaat gcagccatcg
     6961 aacacgtcca agccgtcgcc ttcgatttgg acggcacact gtgcgattcc gtccccgacc
     7021 ttgccgccgc cgcagaagcg atgttggaac aactcggtat gaaaccgctg cccgccaaag
     7081 tggtcgaaag ctacgtcggc gacggcatcg gcaaactggt tcaccgcgtc ctcaccaacg
     7141 accgcgaccg cgaagccgat tccgaactgt gggaaaaagg tttcgtgtcc tatatgaaat
     7201 actaccgcga ccatttgagc gtcttcaccc gcccctatcc cgaaaccgaa gccgggctgg
     7261 cattgctcaa atccttgggc attccgctgg taatcattac caacaaaaac gaaatccttg
     7321 ccgccgagct tctaaaacaa ctgggactcg ccgactactt cagcctgata ctcggcggag
     7381 acagcctgcc cgaaaaaaaa cccagcccgc tgccgctgcg gcacgccgcc gaagttttgg
     7441 gtatcgatgc cgccaatatg cttatggtcg gcgactcgcg caacgacatc atcgccgcca
     7501 aagccgccgg ctgcctgagt gtcggcgtta ccttcggtta cggcgatatg acgctgctct
     7561 cgcaagacga tacgacccgc cccgaccgga ttatcggcgc gctgcccgaa atttacgaaa
     7621 acctgcgacc gcagaaaaac aaagacgaag aataaaacaa tctgttcaga cggcatcgga
     7681 atccgtttcc cataccgtct gaatctttcc gtgccgaaac cgccgccatg aaaccgcaaa
     7741 aatccctacg cgcccgcgcg atggacatcc tctcgcgcca agaagtcagc cgcatcggtc
     7801 tgaaacgcaa acttgcaccg cacgccgaaa gcgaagagga gttggaaaac gtgttaaacg
     7861 aatttgccga acgcaactgg cagtcggatt tgcgctacgc cgaagcctat atccgcagca
     7921 aaagccgcaa acacggttca ttgaggctga aacaggcttt ggcgcaacag ggcatagatg
     7981 aaaaaaccag ccgcaacctg cttcccgacc gctcaagcga aaagcaagcc gccatagccg
     8041 tgttgcgtaa aaaattcaaa catcccgccg ccaacctcaa agaaaaacaa aaacaggcgc
     8101 gtttcctcgc ctatcgcggt tttgatgccg ataccgttca gacggcattg aaacacgctt
     8161 gggacgaaaa ttgggaagac agctgctgac cttccttctt aaatcttttt gcgcggcagc
     8221 gtaaccttac gcccgtttcc aacttttccg gttgagaaca aaatgtccga acaacccgaa
     8281 aaacaccacg cctcccccat cgaagacgaa cgcaaaaacc cggtttaccg tatgggacgg
     8341 gcggttgccg gattcatgct cgccgtttgg gcgggcgtgc tggcactcgt gtttttcttg
     8401 gttttccgtt tttggctttc ctgaacaaaa tgccgtctga aggcttcaga cggcatcggc
     8461 ggcccatttc ggcagactat ccctccatag ctttttttag cttgaattcc acttccccat
     8521 tccctaaaat tttcccgcac ccatttcaaa acaccctttc ttaaaacagg tacaccatga
     8581 cacaacaacg ccaactgcct tcccacgaac tcattatgtc cgaactgatg atgccggaca
     8641 ccgccaattt cagcggcaac gtacacggcg gcgaactcct gctcctgctc gaccaggttg
     8701 cctattcctg cgccagccgt tacagcggca attattgcgt taccctttcg gttgacaaag
     8761 tcctgtttaa agaacccatc cacatcggcg atttggttac cttttacgcc gctgtcaact
     8821 acacgggacg cacctcgatg gaaatcggca tccgtgtcga agcacaaaac atccgcaccg
     8881 gcgaaatccg ccataccaac agctgctact tcacgatggt tgcggtcaaa gacggcaaac
     8941 ccgtccccgt ccctccgctg gaaatcctga ccgaccgcca acgctgccgc tacgaaaaag
     9001 ccaaaaaacg cagagaaatc agcctccaag cctccggaga cgtgtcctgc ggctgctgac
     9061 ggcggcctat gccgtctgaa agacaggaca agcattgttc cgacattcgg tgtaatggtt
     9121 tgatttattg aagtaaaatc ggctgattct ggctcatccg tttttcaacg ccattttgga
     9181 acacagccgt gagactaagc ggttgtgttt tcatattccc ttgatgcagc cctaatcagt
     9241 cggacaaaat gccttttatc cgataaaacc gccctccgaa cggaaataag cggcttttcc
     9301 attgcaaacg gatgaaatca agcaaatacc caaacacagt caaacaaatt tatacgcccc
     9361 gtcccttcgg aatgatttga aaacacagcc gccaaaacaa aaatgccgtc tgaagacctt
     9421 tcagacggca tttttaacct gattgcaaac ggaaagtcag aacgcgatat agctgttcgg
     9481 gttaaccggt ttgccgtttt gacgcacctc gaaatgaagc tgcgttctgg aagcatcggt
     9541 attgcccatc aaagcaacct gctgaccgcg tttgacctgc tgaccttcgc cgaccagcaa
     9601 tttttggttg tgcccgtacg cggtcaggaa agaggaattg tgctggatga tgaccaagtt
     9661 tccgtattcc ctcaaacctg aaccggcata aaccactttg ccgtcagccg ccgccaaaac
     9721 gggttgtccg gcattgccgg caatatcgac acccttgttg ccgccgccga aatcggcaac
     9781 cactttacct tgggtcggac gctgccaaac aatgccgccg accgaacgcg tgccggaagg
     9841 cg
//
LOCUS       DAWXHA010000082         9619 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.082, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000082 DAWXHA010000000
VERSION     DAWXHA010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9619
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.082"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(61..936)
                     /locus_tag="AABD07_001566"
     CDS             complement(61..936)
                     /locus_tag="AABD07_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFB2356059.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     SVLKPDVGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKSDSGKKSGSAWRQALLLLGVWAGYGI
                     IDILFKQIAKSGTAFAGNLLVAFALAGVLMFACLFAKSVRWRVESVVGGILLGGLNFM
                     NIVTYITAHQMMKDSPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLSLCSI
                     ACLFYWTEVKALFGI"
     gene            complement(940..1632)
                     /locus_tag="AABD07_001567"
     CDS             complement(940..1632)
                     /locus_tag="AABD07_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HFB2356060.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQRAYDTLSDLSKRTQYDASFRRHEERGRQEEAFRREQARREQFYGEQMRREQA
                     FRREFERQASRSRHAYEPSGSGSGRNYILAAYILFGLGAIMQFMPIVGVILAYMKRNS
                     LDSIVYAAHTEYLIKTFWRTFWLYLLGALTARFGIGVLIIIATTVWYFYRIIAGFIRF
                     NDGRAVAPEKWI"
     gene            complement(1654..2133)
                     /gene="ybaK"
                     /locus_tag="AABD07_001568"
     CDS             complement(1654..2133)
                     /gene="ybaK"
                     /locus_tag="AABD07_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HFB2356061.1"
                     /translation="MSKHTYPITPAVRVLHENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGPIVLMHGDKQISTRNLARHLGAKHIEPAAPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPDDLNILNPKTIQAAV"
     gene            2208..2570
                     /locus_tag="AABD07_001569"
     CDS             2208..2570
                     /locus_tag="AABD07_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFB2356062.1"
                     /translation="MDIRYFGTTPRYSEAVCAGGLIFLSGMVPENGETAAEQTADVLA
                     QTDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKRDAATA"
     gene            2604..3467
                     /locus_tag="AABD07_001570"
     CDS             2604..3467
                     /locus_tag="AABD07_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HFB2356063.1"
                     /translation="MKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYN
                     TPKGRVIANMIVVNRGDDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     AASAEPLAAQEPSLAFTSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAAEAGILLTADGEEAGIVLDSVQDSENFTALAVIKFSAAQKELTVPNGGIFKA
                     VHLFFKTKNAE"
     gene            3559..4518
                     /gene="ttcA"
                     /locus_tag="AABD07_001571"
     CDS             3559..4518
                     /gene="ttcA"
                     /locus_tag="AABD07_001571"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HFB2356064.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDTINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFAGLERGQNLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(4612..7551)
                     /locus_tag="AABD07_001572"
     CDS             complement(4612..7551)
                     /locus_tag="AABD07_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HFB2356065.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRTADENPELLFAA
                     KQYANNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTQQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFVKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFM
                     IVDEPHKFPTRDSAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSDGKEAKFELNEKDKKQTFKLAKGEDLAQIHPAISDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIRAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLVLVNQLFSDGIIDDNENFAE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGICTAVNEAYINNGLMLSRRIDSIEDEDFIR
                     FNTMTYREFLEKLAQTAKIQMQTLHQAFYRVRDELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYRLVGSKIHPTKFTNKDGKPRAVKKADLGRFEDTEHRPAAGYLFGEIF
                     YDSDIEHENVANNQIEGVIVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTKSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(7641..9437)
                     /locus_tag="AABD07_001573"
     CDS             complement(7641..9437)
                     /locus_tag="AABD07_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFB2356066.1"
                     /translation="MNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLIRGD
                     NLEVLKHLKNAYANSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELALLANIDEDEAAR
                     ILDFTDKGSNSHSAWLTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEVFGE
                     GNFVAQLPWRKRTAKSDVPFGISQDYEWIFVFAKSCQFIAATKGKERRYYETDDFPDR
                     PWRTHDLTKQTTAAERPNSFFTMVDPKTGKKYPANPNATWRVTKDTFQDYYNKGKIVF
                     PDDYDFLNISNPVMRYFKDDDMKKAGEDFGKVAVSSRLPENVGTLADAVAEYLAIFSR
                     TLPENIGMTKEGTKEITDLFGSKIFTFPKPSQLIKFLVSISSKSNDLILDFFAGSGTT
                     AHAVMQLNAEGQNGNRRYICVQLPEKTAEKSEARKAGYPTIFDITKARIEKAAAKIRV
                     EHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQPDLPLNDELSEEQLQTLLTTWTLYDG
                     AALTTPVEPVRLGSYTAYLCEKRLYLLNKGFTSADLLAFIKKLDDDADFNPNRVIVFG
                     SNMASAMQHELDQAVRGYTNKKEIELNVIIRV"
BASE COUNT         2243 a         2543 c         2315 g         2518 t
ORIGIN      
        1 tgccgtctga agcagcattt tcctgtttca gacggcattt tgttatatca atcagccgga
       61 ttatatgccg aacagtgcct taacttctgt ccaatagaac aggcaggcaa tggagcataa
      121 tgacagtaca atgcctgccg tattgattgt gttgattttt tccttaaaga acaatgcgcc
      181 cgaaagcgtc cctaaaacaa tcacaccgat attcataccg gcaaaaacca gcgtgggact
      241 gtccttcatc atttggtgcg cagtgatgta ggttacgatg ttcataaaat tcaaaccgcc
      301 caagagtatg ccgccgacca cgctctcaac gcgccatctg accgatttgg caaacaggca
      361 ggcaaacatc agcacacccg ccagcgcaaa tgcaaccagc aggttgcccg caaatgccgt
      421 gccgcttttg gcaatctgtt tgaacaggat gtcgataatg ccgtaacccg cccacacacc
      481 gagcagcaat aacgcctgcc gccacgcgct gcctgatttt ttgccgctgt cgcttttcca
      541 aagcaggcag aacagtgcgg caaaggcgag gcacagtccg atcagtttgc cttcactgag
      601 tttttcgcca aacagcgtca aagcggcaac aatcggtaaa aacagcgaca aacgctgcgc
      661 cgcgtcggat ttgacgatac cggcggattc tacggatttg cccataatga caaatacgga
      721 cggcagcagc acgcccaaag cggcaaacag cggccacgtc ggcaaaaatg caccgatatt
      781 gccgacatcc ggcttcaata ccgacagggt cagtatgacc gcgaccacat aattgacggc
      841 gaccgcctgc gcgatgtcga tttttttctt ccttgccatt ttcagcaaaa tggaaaccga
      901 cacgctgaac acgatgctga ttaacaggta ggccatgctc tatatccatt tctcgggcgc
      961 aaccgccctg ccgtcgttga agcggataaa gccggcgatg atgcggtaga aataccagac
     1021 ggtcgttgca ataataatca gcacgccgat gccgaaacgg gcagtcagcg cgcccaaaag
     1081 ataaagccaa aatgtgcgcc aaaaggtttt aatcaggtat tcggtatgtg cggcatagac
     1141 aatgctgtcc aaactgttcc gtttcatata ggcgagaatc acgccgacta tgggcatgaa
     1201 ctgcatgatt gcacccaaac cgaacaggat gtaggcggcg aggatatagt tgcgcccgct
     1261 tccgctgccg gacggttcgt aagcatggcg cgaacgtgaa gcctgccgtt caaactcccg
     1321 tctgaacgcc tgttcgcggc gcatctgttc gccgtaaaac tgctccctgc gcgcctgttc
     1381 gcggcggaat gcctcttcct gccgcccgcg ttcctcatgc cgtctgaagg acgcgtcgta
     1441 ttgcgtccgt tttgacaggt cggaaagcgt atcgtaagcc cgttggattt ctttgaactt
     1501 ttcttccgcc tgcggattgc ccggattgcg gtcgggatgg tatttcatcg ccagcttgcg
     1561 gtaggcgcgt ttgatttcgt ccgcccccgc ctgcggcgac acgcccaata cggcatacaa
     1621 atctttgtcc atattgctcc ttatacttcc cggtcaaacc gctgcctgta ttgttttcgg
     1681 gttcaaaata tttaaatcat cggggcggat accgataatg aacccgcgtt ttccgccatt
     1741 gatatagatg gtttccaaat ccatcaccga ctgttcgacg taaatatcca attttgtccg
     1801 gatgccgaac ggcgttgtgc cgccgaccag atagcccgtc cacttgtttg cctgcgcagg
     1861 cgcggcgggt tcgatgtgtt tcgcacccaa atgccgcgcc agattgcggg ttgaaatctg
     1921 tttgtcgccg tgcatcaaga caatcggccc cttaccgttt tcatcttgca aaacaatggt
     1981 tttaatgacc aagtgttcgt ctttgccgaa cagtcgggca aactgcgccg tgccgccgtg
     2041 ttcctcatag gcataggtaa aaggttcaaa ttcgatgccg ttttcatgca aaacgcgtac
     2101 ggcaggtgtt atcggataag tgtgtttact catttttcgt catgcaaaac atggaaatcg
     2161 gtcaagcgca atgttaccat atatcccctt tatcgaagga aaccgatatg gatatccggt
     2221 atttcggcac aacgccccgc tattccgaag cggtttgcgc gggcggcttg attttcctct
     2281 ccggcatggt tcccgaaaac ggtgaaacgg ctgccgaaca gactgccgac gtgcttgccc
     2341 aaaccgaccg ctggctggcg gaatgcggct cggacaaggc acacgttttg gatgcggtca
     2401 tctacctgcg tgatatgggc gactatgcgg aaatgaacgg cgtgtgggac gcttgggttg
     2461 ccgccggcag aacgcccgcc cgcgcctgcg tggaagcgcg gctcgcccgt ccggagtggc
     2521 gcgtcgaaat caaaataacc gccgtgaaga gagacgcggc aactgcataa acagatttcc
     2581 ttatatttca gagtacgcaa atgatgaaaa ccttactgcc ctttttcggc gtggcgcgcg
     2641 tcagcggcga agaccgccaa accttcctgc acggacagct ttccaacgac atcaataatc
     2701 ttcaggccgg gcaggcgtgt tacgcgactt acaacacgcc caaaggccgc gtcatcgcca
     2761 atatgattgt cgtcaaccgt ggagacgatt tgctgctgat tatggcgcaa gatttgcttg
     2821 aagcaacggt caaacgcctg cggatgtttg tgttgcgcgc caaagccgtt tttgaaatcc
     2881 ttgaagatta cgccgtcggc gcggaattgg cagcatccgc cgaaccgctt gccgcgcaag
     2941 aacccagtct cgcctttacc tccgaatgcg tctcagacgg catctgttcc gtcatcctgc
     3001 accatcgggg cattttgcac atcgcccccg aaaccgccct acccccttat gacgctgccg
     3061 ccgaaaacgc gtggcggctg cacgaaatcc gcagcggtta tccgtggata tgcgcggcta
     3121 ccaaagaaac cgccgtcgcc caaatgctca accagcacat catcggcggc gtacacttca
     3181 aaaaaggctg ctacccggga caggaaatca tcgcgcgcgc ccagtatcgg gggcaggtca
     3241 aacgcggctt ggcggtattg tcgggaaatt cggcagccga agcgggcatc ctgctgacgg
     3301 cggacggcga agaagccggc atcgtactcg acagcgttca agattcggaa aactttaccg
     3361 cccttgccgt gattaaattc tccgccgcgc aaaaagaact caccgtccca aacggcggta
     3421 tcttcaaagc ggttcatctc ttctttaaaa ccaaaaatgc agaataagcc ctctaatgcc
     3481 gtctgaagcc cttcagacgg cattgccgcc cctgttttcg gttacaatgc cgcatcccta
     3541 atttttcaaa ccaccgccat gtccaaaaaa accaagcaag aactcgaaaa caacaaactc
     3601 agcaaacgcc tgcgccacgc cgtcggcgac acgattaacg atttcaacat gatcgagccg
     3661 ggcgacaaaa tcatggtctg cctctccggc ggcaaagaca gctacgccct gttagacatc
     3721 ctgcgccggc tccaagccag cgcgccgatt gattttgaac tggtcgccgt caatctcgac
     3781 caaaaacagc cgggcttccc cgaagaagta ttgccgacct atctcgaaag catcggcgtt
     3841 ccctacaaaa tcgttgaaga agacacttac tccaccgtca aacgcgtgtt ggacgaaggc
     3901 aaaacgactt gttcgctgtg cagccgcctg cggcgcggca tcctctaccg caccgcaaaa
     3961 gaattgggct gcaccaaaat cgccttggga caccaccgcg acgacatcct cgccaccatg
     4021 tttttaaata tgttttacgg cggcaaactc aaagccatgc cgcccaagct ggtgagcgac
     4081 aacggcgaac acatcgtcat ccgcccgctg gcgtatgtga aagaaaaaga cttaatcaaa
     4141 tacgccgaat tgaaacagtt cccgattatc ccgtgcaacc tctgcggctc gcagcccaac
     4201 ctacaacgcc aagtcatcgg cgatatgctg cgcgattggg acaaacgctt ccccggccgt
     4261 atcgaatcga tgttctccgc cctgcaaaac gtcgtccctt cccaccttgc cgataccgaa
     4321 ctctttgact ttgccggatt ggaacgcggt caaaatctga aacacggcgg cgatttggct
     4381 tttgacagcg aaaaaatgcc cgaacgcttt tcagacggca gcgaagaaga tgagagcgaa
     4441 atcaaaatcg agccgcaaaa agccgaacgc aaagtcatca acattctggc gaacaagccg
     4501 aaaacctgcg gcgcgtaaac ctccaccgtc aaaaatgccg tctgaagccc gtttggcgtt
     4561 tcagacggca ttttaaaatc ccgaagcaga cggcttccaa acatttgttt ctcagtgtcc
     4621 gttttcagaa tgcccgcctg ctggcatatt ttgcccgatc agttcggcta tcctctcgcc
     4681 gtcaaactgc gttttgaaca ccaccttgat ttctttggaa atctcggcaa acagcttttc
     4741 ggcatgtttg attttccgct cttcgctttt tcgcaaatct tccgccccgt cagtcccttt
     4801 ggcttcaatc acaaagttca gaatctcgcc gcttttggtt ttcacgatat aggcaaagtc
     4861 gggcgaatac gtgccgccgc cggcaacagg gattttgatg gagtttctcg gtattttggt
     4921 aaatacgatt acgccttcaa tttggttgtt ggcgacattt tcatgttcta tatccgaatc
     4981 gtagaaaatc tcgccgaaga gatagccggc ggcaggccgg tgctccgtat cttcaaatct
     5041 gcccaaatct gcttttttca ccgcgcgcgg tttgccgtct ttattggtaa atttggtcgg
     5101 atggattttg ctgccgacaa gccggtaatc cagttcgaat ttatggaagg aatgatgaag
     5161 caaaaaccgg ttgaagccgt ttttgatttg ggcgatggtc tgcatattca aaaaatcgcc
     5221 aatgttcagt tcgtcgcgga cgcggtaaaa cgcctgatgc aaagtctgca tctggatttt
     5281 tgccgtttgt gccagttttt ccagaaactc acggtaagtc attgtgttga aacggataaa
     5341 atcttcatct tcaatactgt ctatgcggcg ggaaagcata agcccgttgt tgatataagc
     5401 ttcgtttacc gccgtgcata tgcctgcctg cgggaatttg gcggcgtttt cacgcaaata
     5461 ggcggtaaat aaatcgacaa attcggcttc atctttgatt ttgtactgca aaacggcttt
     5521 atggtgaatc agctcccaca aggctttgag ttcttcatat ttgccttcgc gcatgatgat
     5581 ggtgtctttg ccctcgtctt tggcgttgct gactttgcct ttgtccaaac ctttggggaa
     5641 ggcttcggga taggcggctt ttaatttgtc atagccgtct tcggcaaagt tttcattgtc
     5701 gtcaatgatg ccgtctgaaa acagttggtt taccaatacc agcggtttga tatcggggta
     5761 tttttgcaat attttttgtt tcagctcttc ggtaaacttt ttggagattt cttcctgaaa
     5821 agaattgtcg ttgatttcgc cgacaagctg cttcacaaag tctttttcgc tgctatcgac
     5881 aaaataattc agtttgtacg gtacatcgcg cacccgcgcc atcagctcgt ttaccggcag
     5941 gcgcaggccg cgtccgactt cttgcagctt ggaagtcgtg ctgccgctgg aacgcagttt
     6001 gcaaatctgg aaaacgttgg gattgtccca gccttcgcgc agcgtccatt tggaaaaaat
     6061 aaagcggcgc gggttgtcca aagacagcag tttttcctta tcgtgcagga tttcattgat
     6121 ttcctgctcg attctatcgt cgctgtctgt attgtctttg gaaaaatagc cgccgtggca
     6181 ggcggataca tcgtccaacg tcttttgcag gtaatcgcgg taaaacgggt cgctttccgt
     6241 tttcagacgg cgtgccgctt ccgcgcgaat ccagctttca aatttatctt tcaggctgcc
     6301 tgaaagctcg ttgccgctgc ggtagcccgc gatatcgtca ataaaaaaca gcgtcagcgg
     6361 cttgattttg ggctgtggcg cgcgttctgc caaaagcgcg cgttccagct tgaaatgttc
     6421 ggcaaccgcc cgctgcatca tcgcatcctg caccgtttgc gaataggaat aagggttgat
     6481 gacggcaccc gttttcaact ccaagccgtt gcttaacacc accacggttt tattcatttt
     6541 gtcgattttc aaatccgaaa tagccggatg gatttgcgcc aaatcttcgc cttttgccag
     6601 tttgaacgtc tgctttttgt ccttttcgtt taattcaaat ttcgcttctt tgccgtccga
     6661 cgacaccagt tttaccgccg catccatgcc gccctgcatt tcttcctgaa acacgcgcac
     6721 gcctttgacc agcccgtcgt taaacgcgtc tactgccgtc aaacggtaaa gcaagttgta
     6781 atattcatcg ttaaatgttg caccgtagcg caaaatatat tgcggtttta agcgtttgat
     6841 attgccccac gttttcgcgc tatctcgggt cgggaattta tgcggttcgt ccacaatcat
     6901 aaacgggcgc acggcagcca atgcatcaac gggattgtca aacaaatcct tcaatgcctt
     6961 gtcgcccgta tcgttcatgg acgacgaatt aaccatgccc gcgttaatca gcagcacatg
     7021 aatttccttt ttgttttccg ctttgacaaa ttgctcaatc gttatgggcg cattggactt
     7081 tttgccctta ttctttttcg cgctttccac cacataggtt ttcaggcgta cgccttcata
     7141 atcgccgccg aaatcctgtt caaaatgctc tgccaaagcc ttgctttgca aaaactgctg
     7201 tgttcccgcc ttaatggaca aagtcggcac gaccacgata aatttgaaca cgcccagcca
     7261 acggtgcagc tcgaacatgg tttgtgtgta ggtataggtt ttgcccgtgc ccgtttccat
     7321 ggaaatatca aggatatttt ggtcgtccga acggtcgggg aatcggccgt ctataccgtt
     7381 ttggctttgc actttcagga tattgtttgc gtattgtttt gcagcaaaca aaagttcggg
     7441 attttcgtct gccgtccgat atttgggcgt tgccccgtca aacacgccca aaaccgccga
     7501 aaccgcccgc atttggtgcg gctggttttt ctcgtaatta aaaccgctca tgaatgtttc
     7561 tccatgaagt cattgttgta tcgtccttcc cccgcaaggg gaatccaagc cgaaaagcag
     7621 cctgcacttt cggattccgg ttacaccctg ataatcacat tcaactcaat ctctttttta
     7681 ttggtataac cgcgaaccgc ctggtcgagt tcgtgctgca tggcgcttgc catattgctg
     7741 ccgaatacaa tcacacggtt gggattgaaa tccgcatcgt cgtccagctt cttgataaac
     7801 gccagcaaat cggcggaagt aaaacccttg ttaagcagat acagccgttt ttcgcacaga
     7861 tacgccgtat aactgcccaa ccgcacaggc tcaaccggcg tggtcagtgc ggccccgtca
     7921 tacagcgtcc aggtggtcag aagcgtttgc agctgttctt cgcttaattc atcgttaagc
     7981 ggcaaatccg gttgttcggg cgaaaaatcc ttgtctggat gctgcctgaa attgtctgcc
     8041 gtttgaaaga ttttgaagcc cgaatcgccc gtgtaatcgg gatgttcgac gcggattttg
     8101 gcggcggctt tttctatgcg ggctttggtg atgtcgaaga tggtcgggta gcctgcttta
     8161 cgggcttcgg atttttcagc ggttttttcg ggaagctgta cacagatata gcggcggtta
     8221 ccgttttgtc cttcggcgtt aagctgcatc acggcgtggg cggttgtgcc gctgcctgcg
     8281 aagaagtcta ggattaggtc attactcttt gaacttattg aaactaaaaa tttaatcaat
     8341 tgactaggct tggggaaggt aaatattttg ctaccaaata aatctgtgat ttcttttgtg
     8401 ccttctttag tcattccgat attttcaggt agcgtcctac taaaaatagc caaatattcg
     8461 gctactgcat cggctaatgt accaacattt tcaggtaatc tactgcttac agctactttg
     8521 ccaaaatcct cgccagcttt tttcatgtcg tcatctttaa agtaacgcat aactggattg
     8581 ctgatattta agaaatcata atcatcaggg aaaacgattt ttcctttatt ataataatct
     8641 tgaaatgtat ctttggttac acgccaagtt gcatttggat ttgctggata tttttttcct
     8701 gtcttgggat caaccattgt gaaaaaacta tttggccttt ccgccgcagt tgtttgtttc
     8761 gttaagtcgt gggtacgcca aggacgatcg gggaaatcat cagtctcata atagcgtcgt
     8821 tccttgcctt tagttgctgc aataaattgg caagattttg cgaatacaaa tatccattca
     8881 taatcctgcg aaataccaaa aggcacatct gatttagctg ttctttttcg ccaaggcaat
     8941 tgtgcaacaa aattcccttc cccaaacact tcatcacaca acaatttcaa ctgcgccgct
     9001 tcgttatcgt caatcgagat aaaaatcacg ccgtcgtcct ttaacagttc gcgggcgata
     9061 tacaggcgcg gatacataaa ggtcagccac gcgctgtgcg agtttgagcc tttgtcggtg
     9121 aaatctaaaa tccgcgcggc ttcgtcttcg tcaatattcg ccaggagggc aagttcggcg
     9181 ggtgtgaatt tgcggtcgtc ctgatagaca aagccgtccg atccggtgtt gtagggcggg
     9241 tcgatgtaaa tcatcttcac gctgtttgcg taggcgtttt ttaagtgttt caacacttcc
     9301 agattatcgc cgcgaatcag cagattttgg ctgcctgcat tttcgggctt ggcgttgtgc
     9361 gttttgtctt cacttatcag ggtttcgggc ggcaggttgc gaagcaggcg ggcatatgat
     9421 ttgcccagcc agttcatttc gtaaaattcg cgtccgatgt cggtctgtgg cgcaatttcg
     9481 gcttgtaatc tgtcgataag gaaatttccg tctgcgtcaa aacaggcggg aaacagtttt
     9541 ttgagctgtt cgagttgggt agagttggcg gtaatgccgt ctgaagtgta gattgcctca
     9601 gtgttcgccc cggctgtgt
//
LOCUS       DAWXHA010000083         9478 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.083, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000083 DAWXHA010000000
VERSION     DAWXHA010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9478)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9478)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9478
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.083"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(158..907)
                     /locus_tag="AABD07_001574"
     CDS             complement(158..907)
                     /locus_tag="AABD07_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
                     /protein_id="HFB2356067.1"
                     /translation="MRDMAQWRQWAECPDFADGLPDVRRELPFLPAMRRRRLSKAARL
                     VCDAAWDIASAHPGSPVVYASHDGEMARSFDLWLELLKSHTVSPTSFGLSVHNATAGQ
                     WSILRRDMSEQTALAVCADGVETALAEAASLLEEGCGSVLVLAADDPLPEGYAVSATR
                     APFAYALAMVLTKGTRYSLTLSASDDMPSEAGMLPEAYWSGLEWVRFLLNGSRECRRV
                     YRNREWLWQPASCRLKISAMSAPSTTWYRRY"
     gene            1171..1716
                     /locus_tag="AABD07_001575"
     CDS             1171..1716
                     /locus_tag="AABD07_001575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356068.1"
                     /translation="MVLIDRITRYGDDFVEAGAQVKPDHILLAGGMLPYTAFIELMAQ
                     AVGAYAGIQARKNARPVRLGFLPGTRKLEIFAQSVPVGTHLPATAHMSIQDAGVWACP
                     TANCVGRMRRKLRPEHSFQTAFWHAPHSTCTAPNTMTEQLTPSEQAHIRRTTMTETVL
                     ITGSNRGIGKAAALGFGGRRL"
     gene            1697..2362
                     /gene="fabG"
                     /locus_tag="AABD07_001576"
     CDS             1697..2362
                     /gene="fabG"
                     /locus_tag="AABD07_001576"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HFB2356069.1"
                     /translation="MADDGFDIAVHCRSRRDEAEAVAEEIRALGRNARVLQFDVSDRE
                     ACREILTADIEANGAYYGVVLNAGLTRDNAFPAFSDDDWDVVPRTNLDGFYNVLHPLV
                     MPMIRRRKAGRIVCMASVSGLTGNRGQVNYSASKAGIIGAAKALAVEPAKRKITVNCV
                     APGLIDTEIVDENVPVGEILKAVPAARMGLPEEVAHAVHFLMDEKAAYITRQVIAVNG
                     GLC"
     gene            2356..3174
                     /locus_tag="AABD07_001577"
                     /pseudo
     CDS             2356..3174
                     /locus_tag="AABD07_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714702.1"
                     /note="FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes
                     a condensation reaction in fatty acid biosynthesis:
                     addition of an acyl acceptor of two carbons from
                     malonyl-ACP; required for the elongation of short-chain
                     unsaturated acyl-ACP; frameshifted; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            3755..3830
                     /locus_tag="AABD07_001578"
     tRNA            3755..3830
                     /locus_tag="AABD07_001578"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3788..3790,aa:Ile,seq:cat)
     gene            3902..4663
                     /locus_tag="AABD07_001579"
     CDS             3902..4663
                     /locus_tag="AABD07_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019743000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFB2356070.1"
                     /translation="MMKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSADNTAE
                     IAEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVRTG
                     DYAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKGGSVQGKVHETVQTPYPERRLKH
                     FMYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVSFVRDIILRPIWGFFKIYILNKG
                     FLDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            4664..5728
                     /locus_tag="AABD07_001580"
     CDS             4664..5728
                     /locus_tag="AABD07_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFB2356071.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     DELMRRRFSEVSSVFTTRLHTFNGLFSLYALTRFIRENHISHLMIHTGKIAALSVLLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRGVSASGAEPFVSFEGFTEKLASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAGH
                     QCVAARFTINHTADKLLDAI"
     gene            5962..7299
                     /locus_tag="AABD07_001581"
     CDS             5962..7299
                     /locus_tag="AABD07_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFB2356072.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGKNAVDSFRVLRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAVRSLTLPDAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PNQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGAWGEFKVFGKTIFDLWDYVISAVIMPIGALSVS
                     IFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNSLGIL"
     gene            complement(7474..8073)
                     /locus_tag="AABD07_001582"
     CDS             complement(7474..8073)
                     /locus_tag="AABD07_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosX protein"
                     /protein_id="HFB2356073.1"
                     /translation="MWKLYADYFAARPDAETPPENSVKETLKRVGFGKVSFDDREIRF
                     AEKGMGLSLNGIAQGYITDKVVALLKANGVPAALVDMGEIRGFDTNGRRMWNVGIRNP
                     DDEEGVLANITMKDKAFATSGGYGTVMDKAGRLTHLFDPRTGVSTPRYKSMSVMADDA
                     AVADALSTAFSVMDLPLIRSVAESRRLKVRLAMPDNIVD"
     gene            complement(8106..8486)
                     /locus_tag="AABD07_001583"
     CDS             complement(8106..8486)
                     /locus_tag="AABD07_001583"
                     /inference="COORDINATES: protein motif:HMM:NF014477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFB2356074.1"
                     /translation="MGRHFGRRRFLTAAAVAVAGAAVSFLPNPFAAGGEKRNMDKKRD
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKMFSLYREDSLISRLN
                     RDGYLTSPPADFLELLSLAAIFTR"
     gene            complement(8495..9289)
                     /locus_tag="AABD07_001584"
     CDS             complement(8495..9289)
                     /locus_tag="AABD07_001584"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HFB2356075.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAVVSV"
BASE COUNT         2259 a         2677 c         2415 g         2127 t
ORIGIN      
        1 cacaaagcgg gataggcaat gcttaatacg gtcaaaaaaa tatgtccgaa aaaaccgggt
       61 ttcattttga atccgcacaa acgttttcag acggcatccg ataaaaacat gccgtctgaa
      121 aaataattag aaatacccga ttagccggcc tgaatcttca ataccgcctg taccacgtcg
      181 ttgacggtgc ggacattgcg gaaatcttca gcctgcagct tgcgggctgc cacaaccatt
      241 cacgattgcg atatacccgg cggcattccc gactgccgtt cagcagaaaa cgcacccatt
      301 ccaaaccgct ccaatatgcc tcgggcagca taccggcttc agacggcata tcgtccgaag
      361 cagacaaagt caggctgtaa cgcgtccctt tggtcagaac catcgccaaa gcataagcaa
      421 acggcgcgcg cgttgccgat acggcatatc cttccggcag cggatcgtcc gccgccaaaa
      481 ccaaaaccga cccgcatccc tcttccaaca gggacgccgc ttccgccaat gccgtttcca
      541 caccgtcggc acacacggcc aatgccgtct gctcgctcat atcccgcctc aatatcgacc
      601 attgccccgc cgtcgcattg tgcaccgaca aaccgaacga agtcggcgac acggtatgcg
      661 atttcaacag ttccaaccac aaatcgaaac tacgcgccat ttccccgtcg tgcgaggcat
      721 aaactaccgg actgccggga tgggcggagg caatgtccca agccgcgtcg cataccaaac
      781 gcgccgcctt actcaaacgg cggcgccgca tagcgggcag gaacggcaat tcccgcctga
      841 catcgggcaa accgtcggca aaatccggac attccgccca ctgcctccac tgggccatat
      901 cgcgcatttt gccgcccgaa acccgtcagt cggcgatgtc gaagtggaac cggcaaataa
      961 tcggcggcat agtttctttc aaaaatttac actgtgccgc attctaacca aagcccatcc
     1021 ccctgacaat gccgaaattc aaacgcatcc acgccatttt ttccgacaac gccgcccctc
     1081 ggcaaaccgc ccgaattagc ctgaatttac atttatcatt gataatgccc gattaccgac
     1141 accgcctccc tgctgccgca cagcgggcgt atggttctga tagaccgcat tacccgatac
     1201 ggcgatgatt ttgtcgaagc aggggcgcag gtaaaacccg accacatcct gctggccggc
     1261 ggcatgctgc cctatacggc atttatcgaa ctgatggcgc aggctgtcgg cgcatatgcc
     1321 ggcatccaag cccgaaaaaa cgcacggccg gtccggctcg gcttcctgcc cggcacgcgc
     1381 aaacttgaaa tcttcgccca atccgtccct gtcggaacac atttgccggc aacggcgcat
     1441 atgtctatcc aagatgccgg ggtatgggcg tgtccgactg cgaactgcgt tggacggatg
     1501 cgccggaaac ttcgtccgga acactccttt cagacggcat tttggcacgc gcctcactca
     1561 acgtgtacag ccccgaacac catgacggaa caactgacgc cgtctgaaca ggcacacata
     1621 cggagaacaa ccatgactga aaccgtcctg attaccggct caaacagagg cataggcaaa
     1681 gccgccgcac tcggttttgg cggacgacgg ctttgatatc gccgtccact gccgcagccg
     1741 ccgcgacgaa gccgaagccg tggcggaaga aatccgcgct ttgggcagaa atgcgcgcgt
     1801 gttgcagttt gacgtgtccg accgcgaagc ctgccgcgag attctgaccg ccgacatcga
     1861 agcaaacggc gcgtattacg gcgtggtgtt gaacgccggc ctgacgcgcg acaatgcctt
     1921 ccccgcgttt tcagacgacg attgggatgt ggtgccgcgg actaatttgg acggttttta
     1981 caatgtactg catccgctgg ttatgccgat gatacgccgc cgcaaagccg gacggattgt
     2041 gtgtatggca tcggtgtccg gcctgacggg caaccggggg caggtcaatt acagcgcgtc
     2101 aaaagcgggc attatcggcg cggcaaaagc cttggcggtc gaaccggcga aacgcaaaat
     2161 caccgtcaac tgcgtggcgc cgggtttgat cgatacggag attgtcgatg aaaacgtacc
     2221 cgtcggagaa attttgaaag ccgtccccgc cgcgcgtatg ggactgccgg aagaagtggc
     2281 gcacgcagtg cacttcctga tggatgaaaa agcggcgtat atcacgcgcc aggtgattgc
     2341 ggtgaacgga ggtttgtgtt gaataccaga agggtcgcag taacgggcat aggcggcatt
     2401 accgccttcg gccgggattg gcaaagcata caggcagcat tcaaagccga aaaaaacgcc
     2461 gtcaaatata tggattggcg cgaacgtttc cccgaattgg aagcgcaact gggtgcgccg
     2521 attgaggatt acgcgccgcc gaaacattgg acgcgcaagc ggctcagaag tatggggcgc
     2581 gtgtcgtacc tgtgcgtcga tgcggcggag caggcgctgg cggatgccgg tttgctcgga
     2641 gacgaaagca ttaccgacgg acggatgggc gttgcctgcg gctcttccgg cggcggcacc
     2701 aaagacatcg gagatgtggg cgaattgttg ctgaccggca cgtcgcgcaa cttcggcgcc
     2761 aatacctatg tgcgtatgat gccgcacacc gccgacgcca atatcggcat ctttttcgga
     2821 ttaataagga cgcatcatcc cgacatcgag cgcgtgttct tcgggcagcc aaggcatagg
     2881 ttatgcttac gaggccatca aatacggtct gaccgatatg atgctggcgg gcggcggcga
     2941 agaattttgc ccgtccgaag tgtatgtttt cgactcgctc tatgccgcca gccgccgcaa
     3001 cggcgaaccg gaagaaaccc cgcgtccata cgacgcgaac cgcgacgggc tggtcatcgg
     3061 agaaaaggcg cggggatttt cgtattggaa gaattggaac acgccaaacg gcgcggtgcg
     3121 aaaatttacg ccgaactcgt cggctacggc gccaacagcg acggcatcaa tatcggcgaa
     3181 ggcgcagccg tattcatcat gacgcgcgat gcggattttt ccggcggtat gcagcttctg
     3241 ggttacggcg caagcagcga tgcctaccat atttccacgc cccgccccga cgcaaaggcg
     3301 caatcctcgc ctttcagacg gcattgcagc acgccggcct tgcgcccgaa gacatcggcc
     3361 ggattaatct gcacggcacc gggacgcacc acaacggcag tatggaaagc cgcgccgttg
     3421 cagcggtttt cggcaacaat acgccctgca cgtccgccaa gccgcaaacc ggacacacgc
     3481 tgggcgcggc gggcgcaatc gaagccgcgt tcgcgtgggg cattgccgac cggcaaagca
     3541 atcccgaagg gaaacttccg ccccggcttt gggacgggca gaacgacccc gacctgcccg
     3601 ccattaacct gaccggcggc ggctgggaaa ccgaaaaacg cattgccgcc agctcgtcgt
     3661 ttgccttcgg gggaagcaac tgcgtcttaa tcatcggatg aaataagttt gtcaatccca
     3721 ccgctatgct atacaatacg cgcctactct tgacgggtct gtagctcagg ggttagagca
     3781 ggggactcat aatcccttgg tcgtgggttc gaaccccacc ggacccacca attcccaagc
     3841 ccggacgtat gtttgggctt ttttgccgcc ctgtgaaacc aaaatgcttt gagaaacctt
     3901 gataatgaaa aaagtcagcg tattgattgt tgccaaaaac gaagcaaacc acattcggga
     3961 atgtattgaa agttgccgtt tcgataaaga agttatcgtt atcgacgacc atagcgccga
     4021 caacactgcc gaaattgccg agggtttggg tgcaaaagtc ttcagacggc atttgaacgg
     4081 ggatttcgga gcgcaaaaaa catttgccat cgaacaggca ggcggagaat gggttttcct
     4141 gattgatgca gacgaacgct gcacgccgga actatctgat gaaatctcaa aaattgtccg
     4201 aaccggcgat tatgccgcct attttgtcga acgccgcaac cttttcccca accatcccgc
     4261 cacacacggc gcgatgcgtc ccgacagcgt atgccgtctg atgccgaaaa aaggcggttc
     4321 ggtgcaaggc aaagtacacg aaaccgtaca gaccccctac cccgaacgcc gtctgaaaca
     4381 ttttatgtac cattacacgt acgacaactg ggaacaatat ttcaacaagt tcaacaaata
     4441 tacttccatc tcggccgaga aataccggga gcagggaaag cccgtgagtt tcgttaggga
     4501 cattatcctc cgtccgattt ggggtttttt caaaatttat atcctgaaca aagggtttct
     4561 tgatggaaaa atgggttgga ttatgtccgt caaccacagc tattacacga tgattaaata
     4621 tgtcaaacta tattatctgt acaaatccgg cggaaaattt taaatggaaa aagaattcag
     4681 gatattaaat atcgtatcgg ccaagatttg gggtgggggc gaacaatatg tctatgatgt
     4741 ttcaaaagca ttgggacttc ggggctgcac catgtttacc gccgtcaata aaaatgatga
     4801 attgatgcgc agacgctttt ccgaagtttc ttccgttttc acaacgcgcc ttcacacgtt
     4861 caacgggctg ttttcgctct acgcgcttac ccgctttatc cgggaaaacc acatttccca
     4921 cctgatgata cacaccggca aaattgccgc cttatccgta cttttgaaaa aactgaccgg
     4981 ggtgcgcctg atatttgtca aacataatgt cgtcgccaac aaaaccgatt tttatcaccg
     5041 cctgatacag aaaaacaccg accgctttat ttgcgtttcc cgtctggttt acgatgtgca
     5101 aaccgccgac aatcccttta aagaaaaata ccggattgtt cataacggta tcgataccgg
     5161 ccggttcccc ccgtctcaag aaaaacccga cagccgtttt tttaccgtcg cctacgccgg
     5221 caggatcagt ccggaaaaag gattggaaaa cctgattgaa gcctgtgtga tactgcatcg
     5281 gaaatatcct caaatcaggc tcaaattggc agggcacgga catccggatt atatgtgccg
     5341 cctgaagcgg ggcgtatctg cttcgggagc agaaccattt gtttcttttg aagggtttac
     5401 cgaaaaactt gcttcgtttt accgccaaag cgatgtcgtg gttttgccca gcctcgtccc
     5461 ggaggcattc ggtttgtcat tatgcgaggc gatgtactgc cgaacggcgg tgatttccaa
     5521 tactttgggt gcgcaaaagg aaattatcga acatcatcaa tcggggattc tgctggacag
     5581 gcttacgcct gaatctttgg cggacgaaat cgaacgcctc gtcttaaacc ccgaagcaaa
     5641 aaacgcactg gcaacggcag gacatcaatg cgtcgccgcc cgtttcacca tcaaccatac
     5701 cgccgacaaa ttattggatg caatataagc cgctttcaga cggcctatgc cgtctgaaag
     5761 cctttgatgc aacaaaccgc caaattatat tcgttcattg gaaaaaaaca ccccgaattc
     5821 atccttcaaa ataagaaaat cccaatatcc cccgatatcg cgcagcctat tggcaaagtt
     5881 ttgcagcgtc ttccccggct tgtgccgccg cgtcaagtgc tttgttacaa tgcactacct
     5941 tcacatttct taataaattt tatgagtaac catacttctt ggtcgtccaa aatcggtttc
     6001 gtacttgctg cggcaggttc ggccatcggt ttgggcgcga tttggaaatt tccttatacg
     6061 gcgggcacca acggcggcgc ggtgtttttc ctgctgtttt tgatatttac cgtcttggtc
     6121 gccctgcccg tccagcttgc cgaattttat atcgggcgca cgggcggtaa aaatgccgtc
     6181 gattccttca gggttctgcg tccgggtacg caatggcttt gggtcgggcg catgggcgtt
     6241 gccgcctgct ttattttgct gtcgttttac agcgtggtcg gcggatgggt attgaattat
     6301 gtcgtccaca gttttacagg ggcaatccat gcgggagcgg actttgaagc cctgttcggc
     6361 acaacgattt ccaatccggc aggttcgctg tcctatcagg cactgtttat gctgattacg
     6421 gtttgggtgg tcaaaggcgg catttcagac ggcattgaaa aggcaaaccg ttatctgatg
     6481 ccggggctgt ttatcctctt tattgcgctg gctgtccgtt cgctgacgct gccggatgca
     6541 atggagggcg tgtctttcct gctcaaaccc aattggtcgt actttaaagc cgatacgatg
     6601 attacggctt tgggccaggc gttttttgcc ctgagcatcg gcgtttccgc catgattacc
     6661 tatgcttcgt atttgggaaa agatcaggat atgttccgtt ccggccatac gattatgtgg
     6721 atgaacctct tggtttccct gcttgccggc ctggtgattt tcccggcggt attcgccttc
     6781 ggttttgaac cgaaccaggg gccgggattg atttttatcg tattgcccgc agtgttcatg
     6841 aaaatgccgt tcggtacggt tttatttgca gtattcatgc ttctggtcgt tttcgccacg
     6901 ctgacttcgg cattttcgat gttggaaacg gtcattgcct caaccatccg ccaagacgag
     6961 cgcaaacgca aaaaacatac ttggcttatc ggcacggcta ttttcattgt cggcatcccg
     7021 tccgcgctgt ctttcggcgc atggggtgag tttaaggttt tcggcaaaac catttttgat
     7081 ttgtgggact atgttatttc cgccgtcatt atgccgattg gtgctttgag tgtttccatc
     7141 tttaccgcct ggattcagga caagcagtct gtgttaaaag atgccggcgc gggcagcacc
     7201 gtaccacggg cagtgctgct gctgtggctg aataccttgc gctaccttgc cccgattgcc
     7261 attattattg ttttcgtcaa ttctttaggc atcctttaaa cataccgccc gacggcaaaa
     7321 tgccgtctga aagcctttca gacggcattt tgcttcagat tcaacctatt tcgttcaaag
     7381 tatagtggat taaatttaaa tcaggacaag gcgacgaagt cgcagacagt acagatagta
     7441 cggcaaggcg aggcaacgcc gtaccggttt ttgttaatcc actatattgt ccggcatggc
     7501 cagcctaact ttaagccgcc tgctttcggc aaccgaccgt atcagcggca aatccatcac
     7561 ggaaaacgcc gtcgacaagg catcggcaac cgccgcatca tccgccatta cgctcatgct
     7621 tttataacgc ggcgtactca cgccggttcg cggatcgaac aaatgggtaa gcctgcccgc
     7681 tttgtccatc accgtcccat agccgcccga agtggcaaac gccttgtctt tcatcgtgat
     7741 atttgccaac acgccttctt cgtcgtccgg attgcggatg ccgacattcc acatccgcct
     7801 gccgtttgta tcaaaccccc tgatttcgcc catatcgacc agcgcggcag gcactccgtt
     7861 tgctttaagc agcgcaacaa ccttgtccgt gatatagcct tgcgcgatgc cgttcaagga
     7921 caaacccata cccttttcgg caaaacggat ttcacggtcg tcaaacgaga ctttgccgaa
     7981 gccgacccgt ttcagggttt ccttcacgct attctccggc ggcgtttccg catcgggacg
     8041 ggcggcaaaa taatcggcat acagtttcca caacgcctga accgtcggat cgaacgcgcc
     8101 ttccgtcagc gcgtgaatat cgcggccagg ctcaacagtt ccaaaaaatc cgccggaggc
     8161 gaagtcagat aaccgtcgcg gttcagacgg ctgatcaggc tgtcttcacg gtaaaggctg
     8221 aacatttttt ccaaacgcgc cacttccgcc aaaaccttat tgaccaaatc cgccgcctgt
     8281 ctgtcgtcca cgccgaacag gcgcagctcc gcgccggaac ccagcgcgac acctttccag
     8341 aaaaacacat tttcatcgcg ttttttatcc atgttgcgtt tttcgccgcc ggcggcaaaa
     8401 ggattcggca aaaaagaaac cgccgcaccg gccacagcaa cggcggcagc cgtcagaaaa
     8461 cgtctgcgcc cgaaatgcct gcccataccg cctcctaaac cgacactacc gccttgatgt
     8521 gcggatgcgg atcgtagcct tccaactcga aatcttcaaa cttgaaggca aacaaatcct
     8581 tgacttcagg attgattttc atcacaggca aggcgcgcgg ttcgcgttcc aactgcaatg
     8641 cggcctgttc gaaatggtta cggtacaaat gcgcgtcgcc aaacgtatgg acaaactcgc
     8701 ccgcctccag cccgcacact tgcgccatca tcatcgtcaa cagcgcgtag ctggcaatat
     8761 taaacggcac accaaggaaa atatctgcac tacgctggta aagctggcag gacagtttgc
     8821 cgtcggcaac gtaaaactga aacagcgcgt ggcagggcgg caaggccatc tcatcgacca
     8881 aagccggatt ccacgccgac acaatcaggc ggcgcgagtc ggggtttttc ttaatttgtt
     8941 ccaccacatt ggcgatttgg tcgatatgcc tgccgtcggg cgcgggccag ctgcgccatt
     9001 ggtagccgta aaccgggccc aagtcgccgt tttcgtccgc ccactcgtcc caaatggaaa
     9061 cattgttatc cttcaggtat ttgatattgg tatcgccttt gaggaaccaa agcagctcgt
     9121 ggattatcga gcgcaaatgc agctttttgg tcgtcagcag cggaaaacct ttgcccaagt
     9181 caaaacgcat ctgataaccg aatacggagc gcgtacccgt accggtgcgg tctgatttgt
     9241 ccgtaccgtt gtcgaggacg tggcgcatca agtccaaata ggccttcatc atcatctttc
     9301 atcaaattaa acggcacata ttgtaacatt tccggccaac acccgagtcc ggacaaacgc
     9361 gcaggccgcc ccgccggacg ctcaaaacgc ggatgaaggc aggcaggatt gttggcaatt
     9421 tcagcccttt ttcacagcaa aagcaggcgt gaaaacaaaa ttatcttgat tggaatca
//
LOCUS       DAWXHA010000084         9360 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.084, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000084 DAWXHA010000000
VERSION     DAWXHA010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9360
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.084"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(253..765)
                     /locus_tag="AABD07_001585"
     CDS             complement(253..765)
                     /locus_tag="AABD07_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356076.1"
                     /translation="MKSKLPLILINLSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPAPSPSNGGQAVKYKAPVKTVSKPAKSNTPPQQA
                     PVNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQKINALQSNVLDRQQNI
                     QALQRELGRM"
     gene            complement(856..1251)
                     /locus_tag="AABD07_001586"
     CDS             complement(856..1251)
                     /locus_tag="AABD07_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFB2356077.1"
                     /translation="MPSDKEARAGCLSLPANNGIIRTLPPPFYFTGINIRLFAALGFL
                     SLSGAAAQASIYHCNSNGKSVYTSDPSGSCADADLPKISSHQGGGYRLKIKKLSQEAK
                     IHTGNKKKNKKHAGKKNRQAAKAPKENQK"
     gene            complement(1238..3160)
                     /locus_tag="AABD07_001587"
     CDS             complement(1238..3160)
                     /locus_tag="AABD07_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFB2356078.1"
                     /translation="MIEIKNLTLQRGLKVLLDKASAAVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDISIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     VQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYSGNYDFYQTERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERIAPAHLDSEFSFEFYNPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVHSEKLNIGYFAQHQLDTIRADQ
                     SPVWHIQQLSPEVREQEIRNFLGGFDFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIVVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAATAPAASTQSQNRKDTKRIEAQIRQEKARRSKPIQQKIDKA
                     EKEMVQLSEIQTGCEAFLTQEDAYLEANKEKLQNTLSELAKVKTQLAQIEETWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(3237..3608)
                     /locus_tag="AABD07_001588"
     CDS             complement(3237..3608)
                     /locus_tag="AABD07_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356079.1"
                     /translation="MLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVHKDSVCLPQ
                     CRTLSDLTPENLLSDIKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGISVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            3804..5111
                     /locus_tag="AABD07_001589"
     CDS             3804..5111
                     /locus_tag="AABD07_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HFB2356080.1"
                     /translation="MKPVNIGLLGLGTVGGGAAAVLRDNAEEISRRLGREIRISAMCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKEAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEKQNVIVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     DGVMNAVRVNANMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            5104..5538
                     /locus_tag="AABD07_001590"
     CDS             5104..5538
                     /locus_tag="AABD07_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356081.1"
                     /translation="MTEPKHETPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCMKNIPFAEKWQNDLKARGLDADNTRLAVDYCKCMWEQPLD
                     GLSEKQISSFGKLGAQEQLDLLGGANAFETRDKQCVADLKAD"
     gene            complement(5714..5983)
                     /locus_tag="AABD07_001591"
     CDS             complement(5714..5983)
                     /locus_tag="AABD07_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HFB2356082.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTNALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTLKFRAGKALKDAL"
     gene            complement(6165..8627)
                     /gene="lon"
                     /locus_tag="AABD07_001592"
     CDS             complement(6165..8627)
                     /gene="lon"
                     /locus_tag="AABD07_001592"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HFB2356083.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAAVEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAKLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMTKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLGLPWKKKSRVSKDIAKAGLVLDADHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVRNPLFLLDEIDKLGSDFRGDPASALLEVLDHE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELVVEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLNE
                     DKKRLSETKKTSKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGMIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNVKDLEEIPENVKTGLTIHPVKWIDEVLALGLESRPESWAEP
                     SAAEAAAESASKPKPRSRAIKH"
     gene            8879..>9360
                     /locus_tag="AABD07_001593"
     CDS             8879..>9360
                     /locus_tag="AABD07_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFB2356084.1"
                     /translation="MSSFIFPDNGFEWRNESLQKPPKGWYYVRESGADGILKATYQNI
                     ATVWQGDFHNAKQVLSAMKKKVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGVHEWHKKDTTLIDNS
                     "
BASE COUNT         2103 a         2362 c         2412 g         2483 t
ORIGIN      
        1 tcgttaaatc tgggtataga ttgcataata tacattatgc gaactactgg aaacagctgt
       61 atgtgttgcg ttgaccttca atacgatata caggcagcag gcacacagga tatgccgccc
      121 atactttttt aatccaaaac attatatcaa cgggcgcaaa cagtaaatcg cccaacttat
      181 cccaaaaatt ctcctgcttt ttcatcattt cttctgtcaa atccttggaa cggtcgattt
      241 gaaaacacgg ccttacatac gtcccaattc tctttgcagt gcttggatat tttgctgtct
      301 gtccaaaaca ttgctttgca atgcgttgat tttttgatgg ttgatgttgc cgccttttgc
      361 cagacgtgct tgtgataaca ttttttgggc ttcagtcagg gctttgcgtt cattgcttaa
      421 ttctgcttcg agaatggagc gtctgctgtt atttacaggt gcttgttgag gcggcgtatt
      481 ggattttgcc ggcttggata ctgttttgac cggggcttta tatttgacag cctgtccgcc
      541 gtttgacggt gatggtgccg gttcgggagt ttggggcggg atatagcgtt cgctgctgta
      601 gttgccgatt gggggcaaat cggttgagtg gcagctttta gacggcttgg tggtgtaaac
      661 ggtttctccg ttgattgtgc aggtatagat tttggccgca ttcgcaccca atgggcttga
      721 aatcagggaa aggttgatta ggattaaggg gagttttgat ttcataatgt gtttgatatt
      781 cggataataa tttgattttt tgaggatttt ttgtaaggtt ttcttggcgt tttatgggct
      841 tttcttttcg gttgtttatt tttgattttc cttcggggct ttggcagcct gtctgttctt
      901 tttcccggca tgttttttgt ttttcttttt gtttcctgtg tgtattttgg cttcttgact
      961 aagtttttta attttcaggc ggtatccgcc tccctgatgg ctgctgattt taggtaaatc
     1021 agcatcggca cacgatcctg acgggtctga tgtatatacg cttttgccat ttgagttgca
     1081 atggtatatg gaggcttgcg ccgccgcgcc ggaaagggac aggaaaccca aggcggcaaa
     1141 aagtctgatg tttataccgg taaagtaaaa aggcggtggt aacgtccgaa ttataccgtt
     1201 attggcaggc aaagataagc accctgcccg cgcttcttta tcgctcggca aactgtttct
     1261 cgatttcagt ttcaatccgt tccaattctt cttgacaagc cagccaagtt tcttcgattt
     1321 gggcaagctg tgttttgact tttgccagct cggataaggt attttgcaat ttttctttgt
     1381 ttgcttcaag gtaagcgtct tcttgtgtta aaaatgcttc gcatcccgtc tgaatttcag
     1441 aaagctgcac catttctttt tcggctttgt cgattttctg ttgtatcggc ttactgcgtc
     1501 gggctttttc ttgacggatt tgcgcttcga tacgcttggt atccttgcgg ttttggcttt
     1561 gagtggaagc ggctggcgcg gttgcggcgt tttcctgtgc caagcgccat tggcggtaat
     1621 cgttcaaatc gccgtcaaag tttttcagac gacctttgtc tatcaagagg aaactgtcgg
     1681 tcgtggcttc aagcaggctg cggtcgtgcg atacgacgat taatgcacct tggaaacttt
     1741 gcaacgcgag cgttaaggca tgacgcatat ccaaatccag atggttggtc ggttcgtcaa
     1801 gcagcagcag gttcggcttt tgccagataa tcatggcaag ggcaaggcgg gctttttctc
     1861 cgccggaaaa aggttcggtt ttctgcaacg ccatatcgcc gacaaaatcg aagccgccga
     1921 ggaaatttcg gatttcttgt tcgcgtactt cgggagaaag ctgctgtata tgccaaacag
     1981 ggctttggtc ggcgcggatg gtgtcaagct ggtgttgggc gaaatagccg atattaagtt
     2041 tttcggaatg gacgatgctg ccggagagta aatcgatttt tcctgccaaa gctttgataa
     2101 acgtagattt accgctgccg ttgacaccca atagcccgta gcgtgcgccg ctttccagcg
     2161 acagggtaat gtcatgcagg acggttttac cttcgtaacc caaatcagcg tgctccagct
     2221 tcagcaaagg attgggcaga tggtcgggat tgtaaaactc aaaggaaaac tcgctgtcca
     2281 gatgtgcggg agcgatgcgt tcgagcttcg ccaacgcctt catgcggctt tgagcttgaa
     2341 cggctttagt ggctttggct ttgaagcggt cgataaagga ttgcagatgt ttgatttgcg
     2401 cctgctgttt gacatatgcg gcttgttgtt gcgccagacg ctgcgcgcgt tcggtttggt
     2461 aaaaatcgta attgccgctg tattgcgtga gcttttgctg cgacaattca atggtttggg
     2521 tggtggccgc attgaggaaa tcacggtcgt gggaaatgat gatttgcgtg cagggtaaag
     2581 aggcaaggtg gttttccaac cacaagacag tttccaaatc caaatggttg gtcggttcgt
     2641 caagcaagag caaatcagcg cggcaaatca gggcttgcgc aagattcagg cgcatacgcc
     2701 agccgccgga aaaggatttg acgggacggc tgtgttcttc ttgcgaaaaa cccagcccgt
     2761 tcaacaattt tgccgcgcgg gccggcgcgg tataggcgtc gatttcttcc aatttggcat
     2821 gatattccgc ctgcttcatg ccgtcatttt gcacttccgc ctgcctcaat gccgtctgaa
     2881 aagcctgcaa ctcggcatcg ccctgcaaaa cgtaatccaa agcggaaata tccaaatcgg
     2941 gcgtttcttg ggaaacggaa gcgagccgcc agtttttcgg aatcgagata tcgccgccgt
     3001 cctgagtgat ttcgcccttg attaaggcaa acaggctgga tttgcccgtc ccgttcttac
     3061 cgatcaaacc gacgcgctga ccgggattga cggcagcgga agccttgtcg agcaggactt
     3121 tcaaaccgcg ttgcagggtg aggtttttga tttcaatcat aacggaaaca tcgtcgggcg
     3181 ggaaaagccc gtattttacc tgaaagtcag tgccgatgcc gtctgaaacg ggaaatttac
     3241 ggctgaagcc aagcccaagc cctgcgccct tccgagtgca ggaaaaccaa tgtcctgaat
     3301 gccgaatcgg tattcatgca ttccacgctg attccgattc gggaaaaatc cgccatgatt
     3361 ttgggatgga taaactcctg agccgcgccc gtcccgataa tcaatatttc cggatagtca
     3421 acaggtttga tgtcggacaa caggttttcc ggagtcaggt cggacaaggt tcggcattgc
     3481 ggcaggcaga ccgaatcctt atgtacaagc acgggtttat ggaaactttg ccccgccagc
     3541 cggattccgc ccgcgccgca ttcatattct gcaaactgtc cgtctatcgg attttcttca
     3601 aacaacattt tttaccccgt tgctgcatca tctgcaccga aaggggtgca aaatcaggcg
     3661 aattaatgta ggattggcag atttcatctg acgcgcctgc cgatttcaga cggcatttga
     3721 ttcaaagtgc ggcacaatta taccggcagc ggatattttc gtctttcaat atttacattt
     3781 cagtcggctt acaaggagac acaatgaagc cagtaaacat cggtctttta ggcttaggta
     3841 cggtcggcgg cggtgcggct gccgtgttgc gggacaacgc agaggaaatt tcccgccgct
     3901 tggggcgcga aatccgtatt tctgccatgt gcgacttaag cgaagaaaaa gcccgccaaa
     3961 tctgcccgtc cgccgccttt gtcaaagatc cgttcgaact ggtcgcgcgt aaagacgtcg
     4021 atgtcgtcgt cgaattgttc ggcggcacgg gcattgccaa agaagcggtg ttgaaagcca
     4081 ttgaaaacgg caaacacatc gttaccgcca acaaaaaact gctcgccgaa tacggcaacg
     4141 aaatcttccc gctggcggaa aaacaaaacg tcatcgtcca atttgaagcg gcagtagcgg
     4201 gcggtatccc aatcatcaaa gccctgcgcg aaggtttggc ggcaaacagg attaaatcca
     4261 tcgccggcat tattaacggc accagcaact tcatcctctc cgaaatgcgc gaaaaaggca
     4321 gcgcgtttgc cgacgtattg aaagaagcgc aggcattggg ttatgccgaa gccgacccga
     4381 ccttcgacat cgaaggcaac gacgcaggcc ataaaatcac catcatgagc gcgctggcat
     4441 tcggtacgcc gatgaacttc tccgcctgct atctcgaagg catcagcaaa ctcgacagcc
     4501 gcgacatcaa atacgccgaa gaactcggct accgcatcaa actgttgggc atcacccgca
     4561 aaaccggcaa aggcatcgaa ttgcgcgtcc atccgaccct gattcccgaa agccgcctct
     4621 tggcaaacgt cgacggcgtg atgaacgccg tgcgcgtcaa cgccaatatg gtcggcgaaa
     4681 ccttatatta cggcgcgggc gcgggcgcat tgccgaccgc ttccgccgtg gttgccgata
     4741 tcatcgacat cgcccgcctg gttgaagccg acaccgccca ccgcgtaccg catctggcgt
     4801 tccaacccgc ccaagtccaa gcgcaaacca tcctgcctat ggacgaaatt accagcagct
     4861 actacctgcg cgtccaagcc aaagacgaac cgggcacgct ggggcaaatc gccgcgctgt
     4921 tggcacaaga aaacgtgtcc atcgaagcct taatccaaaa aggcgttatc gatcagacca
     4981 ctgccgaaat cgtgattctg acccacagca cggtcgaaaa acacatcaag tcggcaatcg
     5041 cagccatcga agcactggat tgtgtggaaa aaccgattac catgatccgc atggaaagcc
     5101 tgcatgactg agccgaaaca cgaaacgccg acggaagagc aggttgccgc gcgcaaaaaa
     5161 gcaaaagcca aaatccgcac catccgcatt tgggcgtggg tcattttggc gttgctcgct
     5221 tcaaccgccc tgctctccca atgcgcgatg tccaaaccgc aggcaaaaca gaaaattgtc
     5281 gagtcttgca tgaaaaatat tccgtttgct gaaaaatggc agaacgattt gaaagcgcgc
     5341 ggcttggatg cggacaatac ccgtctcgcc gtcgactact gcaaatgtat gtgggagcag
     5401 cctttggacg gattgagcga gaaacagatc agctccttcg gcaaactcgg tgcacaagaa
     5461 cagcttgacc tgctcggcgg cgcaaacgcg tttgaaactc gagacaaaca atgtgtcgcg
     5521 gatttgaaag ccgattgaac ctcaggtctg gaatgccgtc tgaacgcggg gaaaagcgtt
     5581 tcagatggca tttttccatc cgggtttgac gggcagccct tcatccgaat ccgacgggca
     5641 aacccctatc ctgattcggc ggggaaaaca aaaagccgat tcttcaagga atcggctttt
     5701 gctgaaaaac agtttacagt gcgtctttca atgctttacc tgcacggaat ttaagcgttt
     5761 tggcggcggc aatggtcaga ggctcgccgg ttttggggtt gcggccttgg cgttccgcac
     5821 gttcgccgac gtagaaagta ccgaaaccga ccagagtaac ggtgtcgcct tgtttcaggg
     5881 cgttggttac tgcgttggta gtggcatcca aagctttttg tgcggcggct ttggaaatat
     5941 cggcttcttg agcaatcgct tcgatcaatt cagacttgtt cacaatcagt cccttcctgt
     6001 cttaaaaaat gatgaaatgc ccgaatactc ggggtttgta ctgcttgagc aactttcgct
     6061 ttatagcaat tctgaaattg ccgtgtcaag caaaaaatac ggaatcgccc tattttacag
     6121 gctttcagga cgaaaccgca tttttacaac acatttcctg cgtttcaatg tttgattgcc
     6181 ctgctgcggg gtttcggttt tgaagcggat tccgccgccg cttccgcggc agaaggttct
     6241 gcccaagact caggccggct ttccaaaccc aaagccaata cctcgtctat ccatttgacc
     6301 ggatggatgg ttaatccggt tttcacgttt tcagggattt cttccaagtc tttgacattg
     6361 tctttcggaa tcaggacgtg tttgatgccg ccgcgaagcg cagccaacag tttttccttt
     6421 agaccgccga tcggcaggac ttcgccgcgc agggtaattt cgcccgtcat ggcaacatcg
     6481 gcacgcaccg gaattttggt aaaggcggac accatcgcca aagtcatagc aatgcctgcg
     6541 ctcggaccgt ctttcggcgt tgcaccttcg ggaacatgga catgaatgtc ttttttctcg
     6601 taaaaatcag gagccaaacc tactgattcc gcacgggaac ggacaacaga ccatgcagcg
     6661 gatacagatt ccttcatcac atcgcccaac tggccggtac actggatcat gcctttaccc
     6721 ggtaatgctg cggcttcgac agtcagcaat tcgccgccga cttccgtcca agccaaaccg
     6781 gtaacctgtc cgatgcggtt ttcactttcg gcaacgccgt aatcgaagcg gcgcacgccc
     6841 aagtagtcat gtaggttttt ctcattgact ttaaccgccc taggcttggc tttgctggtt
     6901 ttcttggttt cagacaacct cttcttatct tcgttcaagg taatctgcat caccacctta
     6961 cggcagattt tggcaatttc gcggtcgagc gaacgcacgc ccgcctctcg ggtgtaataa
     7021 cggataatat cgcgtaccgc gctttcttcg accaccaatt cgccttcttt cacgccgttg
     7081 cgtttcattt gcttcggtac gagatactgc atcgcgatat tgattttctc gtcttcggta
     7141 tagccggaca gacggatgat ttccatacgg tcaagcagcg gggtcgggat attcaggctg
     7201 tttgaagtcg caataaacat cacgtcgctc aaatcgtaat ccacttcggc ataatgatcg
     7261 gcgaacttgt tgttttgttc gtgatcgagc acttcaagca acgcgctggc gggatcgccc
     7321 cgaaagtcgc tgcccaattt gtcgatttcg tcgagcagga acaacgggtt tcttacgcct
     7381 gcttttgcca tattctgcaa aatcttgccg ggcatagagc cgatataggt acggcggtgc
     7441 ccgcggattt cgctttcgtc gcgcacgccg cccaaggcca tacggacata tttccgcccc
     7501 gttgctttgg cgatggattc gcccaaagag gttttgccca cgcccggagg gccgaccaaa
     7561 cacagaatcg gacctttgag cttgtccata cgtttttgga cggcgaggta ttccaaaatc
     7621 cgttctttga ctttttccag gccgtagtgg tcggcatcca gcaccagtcc ggctttggcg
     7681 atgtctttgc tgacgcggga ttttttcttc cacggcagtc cgagcagggt gtcgatgtag
     7741 ttgcgtacga cggtggattc ggcagacatc ggcggcatca ttttgagttt tttcagttcg
     7801 gacaggcatt tttcttccgc ttctttggtc atacccgcct ttttgatgcc tgcctccaag
     7861 gcatccagtt cgccgttttc gtcttcttcg cccaattctt tgtgtatcgc tttaatctgt
     7921 tcgttcagat aatattcgcg ttgggatttt tccatttggc gtttgacgcg tccgcgtatg
     7981 cgtttttcgg cctgcataat gtcgagttcg gattccagct ttgccagcag gaattccatc
     8041 cgtttgccga tttcgggaat ctccaaaatc tgttggcgtt gcgccagttt caactgcaaa
     8101 tgcgctgcga ccgtatcggt tagccggctg ttttcggcaa tgccgttgat gctgccgata
     8161 atttcggcag ggattttttt attgagtttg gcgtattgtt caaactgcgc caacagggtg
     8221 cggcgcacgg cttcgaggtc ggtattgccg cccgtgtctt cttccacgac cgcctctata
     8281 tgagaaacga acagcccgcc cgtgtcttcg atggtcaaaa cacgtccgcg atacagccct
     8341 tcgaccagca cttttaccgt gccgtcgggc agtttcaaca cttgcaggac ttgtgcgacg
     8401 gtaccggtct gatacaggtc ggcggcaacc ggttcttcta ccgccgcatc ggtttgcgcc
     8461 aacaggaaaa ccggttcctc gcgggtaatg gcgttttcca gtgcggcgat ggatttcggc
     8521 ctgccgacga acagcggcag aaccatatgc gggtaaacga cgacatcccg taaaggaagg
     8581 gtcgccaaag cagcatattc ctcaaaatgc ttttcttttt gtgtcatgga tactctcttg
     8641 tgtctgacag gatacggatt gccgcgtaaa ttggggttga aagtattatt tcaagcatac
     8701 gcggtttatt tatggagttt gatgccatgc cgtctgaaac attccggctt cagacggcat
     8761 gggcttggaa agacaaggcg ggaacaaaaa aacagttctg tgttgccgct ccttgctgta
     8821 ccatccgtat ggtttgcggt tctgccgccc tattttcaaa acatgacgca ggtatcccat
     8881 gtcttctttt atttttcccg ataacgggtt cgaatggcgc aacgaaagtc tgcaaaagcc
     8941 gcccaaaggt tggtattatg tccgcgaaag cggtgcagac ggcattttga aggctaccta
     9001 tcaaaatatt gcaactgtct ggcagggcga tttccacaat gccaaacagg tgctttcggc
     9061 aatgaagaag aaggtccgca aacctgccgc cgtccgttcc gatgcggata tcgccgccct
     9121 tttccacgcc caccgtatga agcaggcgca acagagccgt attctgaata tgcttgccgt
     9181 tgaaatccgc cccggtttcg tgttggacaa caaacgcgcg cccgatatac gcgccgcttt
     9241 gctcgacgtg tacggagagg cggacggcaa accgtttttt ctgccgctca atctgctgct
     9301 ggggtttatg ggtgtgcatg agtggcataa gaaagatact actttaattg acaacagcat
//
LOCUS       DAWXHA010000085         9268 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.085, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000085 DAWXHA010000000
VERSION     DAWXHA010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9268
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.085"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..563
                     /gene="rsmA"
                     /locus_tag="AABD07_001594"
     CDS             <1..563
                     /gene="rsmA"
                     /locus_tag="AABD07_001594"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HFB2356085.1"
                     /translation="PFADKLVIHEGDVLQFDFNNIEGKKKIVGNLPYNISTPLLFKLA
                     EVADDVADMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDPAP
                     KIDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI
                     SPQDRAEHIAPEKYVALSNYLADKAV"
     gene            578..1147
                     /locus_tag="AABD07_001595"
     CDS             578..1147
                     /locus_tag="AABD07_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HFB2356086.1"
                     /translation="MESNLQKTERLIREINRLHAQYSQDYFETGKVRKINLSHTLKNV
                     PTEHILSYRLNLHEAVNDYLAFADTRGIDFFYRVKTAESIHDKINRYLARGTQYPTNN
                     ILNDIFGARLIWPSETVAGILEKLDGWKTEYGLKNWYLRDAGGYIGIHIYFKNSSNFY
                     YPWELQVWDEKDAKANIENHMAYKRNFVR"
     gene            1258..1713
                     /locus_tag="AABD07_001596"
     CDS             1258..1713
                     /locus_tag="AABD07_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356087.1"
                     /translation="MKYTAALLTFLLTACMNPNDAFFQNRRYQMPEAQLNGSNAVFHY
                     GYSQNPDHDLLVDQVRVPDAYRASFARDWIAKEQGYRKNDCVLEKAESGGVTYYTCDA
                     EKGFNGTRFVIYVVNMKNDKGYVKVYRGMNKPNQEELTKLVADLNKFYP"
     gene            1755..2483
                     /locus_tag="AABD07_001597"
     CDS             1755..2483
                     /locus_tag="AABD07_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFB2356088.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLDNITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            2556..2915
                     /locus_tag="AABD07_001598"
     CDS             2556..2915
                     /locus_tag="AABD07_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356089.1"
                     /translation="MYFVDRTAAVLKPTARFLEWLKSTDENMPDLTIEQLRADCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEADLNITPVFDNMM"
     gene            2920..3360
                     /locus_tag="AABD07_001599"
     CDS             2920..3360
                     /locus_tag="AABD07_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HFB2356090.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASIAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGRAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGKTVRQCIMPDMTDKESYRRLKVWVLWRQPKKTAETDTSD"
     gene            3391..4665
                     /gene="folC"
                     /locus_tag="AABD07_001600"
     CDS             3391..4665
                     /gene="folC"
                     /locus_tag="AABD07_001600"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HFB2356091.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVSEVKKRMNLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGFKTGTLTSPHLLHYNERIAINAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNALAAVDIFIREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPASLVAHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDGPARNRNALPFPALRGAYQLSNAACALTVLECLDDRLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRNLINLAYAQKRTAV
                     FSMLSDKDIDGVSETVKDQFDEWYIAPLDVPRGMTADALKAKLEQHHIENIQTFAAVR
                     DAYRAAASKAGEDDRIVVFGSFHTVADVMSVL"
     gene            4679..5719
                     /gene="ftsN"
                     /locus_tag="AABD07_001601"
     CDS             4679..5719
                     /gene="ftsN"
                     /locus_tag="AABD07_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFB2356092.1"
                     /translation="MSENKQNEVLTGYEQLKRRNRRRLVTASSLVAASCILLAAALSS
                     DPADSNPAPQAGETGATESQTANTAQTPALKSAAENGETAADKPQDLAGEDKPSAADS
                     EISEPENVGAPLVLINDRLEDSNIKGLEESEKLQQAETAKTEPKQAKQRAAEKVSATA
                     DSTDTVAVEKPKRSAEPKPQKAERTAEAKPKAKETKTAEKVADKPKTAAEKTKPDTAK
                     SDSAVKEAKKADKAEGKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKAGKKAA
                     IQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
                     RVHGIAGQVTNE"
     gene            5712..6209
                     /locus_tag="AABD07_001602"
     CDS             5712..6209
                     /locus_tag="AABD07_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HFB2356093.1"
                     /translation="MNSLPIADLLASAVIAACIVISTMRGVIAEAGSMVAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGVLIVTLLIMLASKTDLPDTEEWQQSYTVPFFVSLSEAVLNHTDNAPE
                     SLDDD"
     gene            6403..7947
                     /gene="purF"
                     /locus_tag="AABD07_001603"
     CDS             6403..7947
                     /gene="purF"
                     /locus_tag="AABD07_001603"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HFB2356094.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVSEVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHINTGSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMLAFRDPYGIRPLALGSQTDSEGRKSYAVASESVA
                     FNALAYDLERDIRPGEAVFVGFNGTIIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLKKPYREGLIKNR
                     YIGRTFIMPGQSTRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQDLGDLEA
                     VVKALNPKIESFDSSCFNGIYRTGDIDDAYLDRLSAEKSGCAGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            8047..8538
                     /gene="greB"
                     /locus_tag="AABD07_001604"
     CDS             8047..8538
                     /gene="greB"
                     /locus_tag="AABD07_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HFB2356095.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGVDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            8597..9223
                     /locus_tag="AABD07_001605"
     CDS             8597..9223
                     /locus_tag="AABD07_001605"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HFB2356096.1"
                     /translation="MRKIRTKICGITTPEDALYAAHAGADALGLVFYPQSPRAIDIIK
                     AQKIAAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIK
                     AIRVQTASDIRNAATRFPNAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT         2430 a         2647 c         2378 g         1813 t
ORIGIN      
        1 tgccgtttgc ggataaattg gtgattcacg aaggcgatgt attgcagttt gatttcaaca
       61 acattgaagg caaaaagaaa atcgtcggca acctgcccta caacatttcc acgccgcttt
      121 tgttcaagct ggcggaagtg gcggacgatg tcgccgatat gcactttatg ctgcaaaaag
      181 aagtggtcga ccgtatggtt gccgcgccga aaagcaatga ctacgggcgt ttgggcgtga
      241 tgctgcaata tttcttcgat atggaaatgc tgattgacgt gccgcccgaa tcgttcgatc
      301 ccgcgccgaa aatcgattcc gcagtggtgc gcatgattcc ggtgaaacac cgtatcggca
      361 aggcggacga tttcgagcat ttcgccaaac tggtgaaact cgccttccgc caacgccgca
      421 aaaccatacg caacaatctg aaagagcttg ccgacgacga tgatttgcag gcagtcggca
      481 tcagtccgca agaccgtgcc gaacacatcg cgccggagaa atatgtggcg ttgagcaatt
      541 atctggcgga caaggccgtc tgaaaaggga cgcggcgatg gaaagcaacc tgcagaaaac
      601 cgagcgtttg atccgcgaaa tcaaccgcct gcacgcacaa tattcgcagg attattttga
      661 aaccggcaaa gtgcggaaaa tcaatttgag ccacacgctc aaaaacgttc cgaccgaaca
      721 tattttgtct taccgcctta atttgcacga agcggttaac gattatttag cctttgccga
      781 tacgcgcggc atagactttt tctaccgcgt gaaaaccgca gaaagcatac atgataaaat
      841 caaccgctat ctggcacgcg gcacccaata tccgaccaac aacatcctga acgatatttt
      901 cggcgcgcgg ctgatttggc cgtctgaaac agtcgccggg attttagaaa aacttgacgg
      961 ctggaaaaca gaatacggct tgaaaaactg gtatttgcgc gatgccggcg gctatatcgg
     1021 catacacatt tatttcaaaa acagcagcaa tttctactat ccgtgggaat tgcaggtttg
     1081 ggatgaaaaa gatgccaaag ccaatattga aaaccatatg gcgtacaaac ggaatttcgt
     1141 gcgttgaatt gccggcaagc cgccttgaaa ccgtttataa ctgtttataa gagaataaac
     1201 cataaaatac acaaacgtat tcctgacttt tcctttaacc gcccgagtga acaaactatg
     1261 aaatacacag ccgcactcct gacttttctt ttaactgcct gcatgaaccc gaacgatgcg
     1321 tttttccaaa accggcgtta tcaaatgccg gaggcgcaat tgaacggttc aaacgccgtt
     1381 ttccattacg gttattccca aaatcccgat catgatttat tggtcgacca agtccgcgtg
     1441 ccggacgcgt acagggcttc atttgcgcgg gattggatag cgaaggagca aggttaccgc
     1501 aaaaacgact gcgtactgga aaaagcggaa agcgggggtg tgacgtacta cacctgcgat
     1561 gcggaaaaag gattcaacgg cacacgtttc gtcatctatg tcgtgaatat gaaaaacgac
     1621 aaaggctacg tcaaagttta ccggggcatg aataagccga atcaggaaga gttaaccaaa
     1681 ttggttgccg atttgaataa gttttaccct taatcagcca gacggattca gactgcccga
     1741 aaagaatgga cactatgatc aaattcaaaa acgtacacaa acatttcaaa gacctgcacg
     1801 tcatcaacgg cgtaaacttg gaaatcaaaa aaggcgaagt ggtcgtcgtc tgcgggcctt
     1861 cgggcagcgg caaatccaca ctcatccgca ccgtcaacca gcttgaaagc atcgaaagcg
     1921 gcgagatttg ggtggacggc gtcaacgttg ccgaccccaa aaccgatttg aacaaaatcc
     1981 gcgaagaagt cggctttgtg tttcaaagtt tcaacctcta cccgcacctg accgtgttgg
     2041 acaacatcac cctcgcaccg atgaaggtta aggggcaaaa tgcggaacag gcggagaaaa
     2101 aggcaatgga gcttttggaa cgcgtcggac tggcacacaa aaaagacgcc ttcccttccc
     2161 aactttccgg cggccagcag caacgcgtgg cgattgcgcg cgggctggcg atggagccgc
     2221 gcgtgatgct gtttgacgag ccgacttccg cactcgaccc cgaaatggtc ggcgaagtgt
     2281 tgaaagtgat gaaagacttg gcggaaagcg gcatgacgat gatgtgcgta acccacgaaa
     2341 tggggtttgc ccgcgaagtt gccgaccgcg tgattttcgt cgataaaggg caaatccttg
     2401 aagacgaaac gccggaagcg tttttcacca acccgaaaca cgaacgcgcc aagcagttcc
     2461 tgcaacaagt catgacccat tgatgctatg ccgtctgaaa accgaacgtt cagacggcat
     2521 agcccgacac cgcaagatga ttgagaaagc acaccatgta ttttgttgac cgcaccgccg
     2581 ccgtcctcaa gccgaccgcg cgctttttgg aatggctcaa aagcaccgac gaaaatatgc
     2641 ccgacctgac catagaacag cttcgcgccg actgttccgt cttcctcgtt ccgcagttcg
     2701 acgaaccgga agccgtcgtt tcctacttcg acgaacgcta ccggcagatt tttgaggcgg
     2761 agctggcagg ttgggacatc gacaaggaca aatggccgca agatatgggg ctgaaggcgt
     2821 tttgggaatt tttcgacatt gaaatccacg atatggtttt ggatatggaa gaagcggatt
     2881 tgaacatcac gcccgtgttc gacaatatga tgtaacgcca tgcgcgcctt tcagacggca
     2941 ttgaggccgt cccgcatcct gaacatcctg accgtatcac tccactcggc ttccattgcc
     3001 gtctgcctga cttggtttta cggccggatg atgtggttcg gtttggcggc tttggcggca
     3061 agttacgcat actcgctcag gataacgaat ctgaaacacc gccatgccat aaccgccatt
     3121 accatagacc gcgacggacg ggcggaaatc gtatccggca aagacaaaac agcggcaaca
     3181 cttgcgggca gcagtatggt tacgccttat gccttattct tacaatggga cacaggcggc
     3241 aaaaccgtcc gccaatgcat catgcccgac atgacggaca aagaatccta ccggcggctg
     3301 aaagtctggg tgctttggcg gcagccgaaa aaaaccgccg aaaccgatac atcagactga
     3361 tttcagacgg catttgaaaa cgaaacactc atgaaaacac tacaagactg gctctcgcat
     3421 ttggaaaccg cccacagcgg cggtttgatc gacatgggtt tggagcgcgt aagcgaagta
     3481 aaaaagcgca tgaacctgac accgcaatgc cccgtcgtcg tcgtcgcggg aacaaacggc
     3541 aaaggttcgg tctgcgccta cctgacacag atttacaaac aggcaggctt caaaaccggc
     3601 acgctgacca gcccgcattt attgcattac aacgaacgca tcgccatcaa cgccgaaccc
     3661 gtttcggacg atacgattat tgcctctttc gagcgcatcg aagccgcgcg cggcgaaata
     3721 tcgctgactt attttgaatt caatgccttg gcggctgtcg acatcttcat acgcgaacaa
     3781 gtggatgtaa tgatattgga agtcggcttg ggcggacgtt tggacgcggt caacgcgttt
     3841 gacggcgatt gcgcggtggt tactagtgtg gatttggacc atcaggcatt tttgggcgat
     3901 acggtcgaac aggtcggctt tgaaaaggca ggcgtgttcc gcagcggcaa acccgccatc
     3961 tgcggtcaaa accccgcgcc cgcatcattg gtcgcacacg ccgaagccat aggcgcgaaa
     4021 ctgctgatgg tacagcgcga tttcgagttt cacgcgatgg aaaacatcca atggaactac
     4081 cgcttccggc cgcagcattc agacggtccc gcacgcaacc gcaatgccct gcccttcccc
     4141 gcattgcgcg gcgcatacca gctttctaac gccgcctgcg cgttgaccgt attggaatgc
     4201 ctcgacgaca gactgccggt ggacattggt gcaatcaaac gcgggctgct gctggttgaa
     4261 aatcccggac gcttccaagt cctgcccggc cggccgctga ccgtattgga tgtcggacac
     4321 aacccccacg ccgcccgcgc cctgcgccgc aacctgatca accttgccta cgcgcaaaag
     4381 cgcaccgccg tgttcagtat gctgtccgac aaagacatag acggcgtgtc ggaaaccgtt
     4441 aaagaccagt ttgacgagtg gtatatcgcg cctttggacg tgccgcgcgg tatgacggcg
     4501 gatgcactga aagccaaatt ggaacaacac cacatcgaaa acatacagac attcgccgcc
     4561 gtccgcgacg cgtaccgggc ggcagcctca aaagcgggcg aagacgacag aatcgtcgta
     4621 ttcggctcat ttcataccgt cgccgacgta atgtcggtac tgtgaaaagg aaacttctat
     4681 gtccgaaaac aaacaaaacg aagtcctgac cggttacgaa cagctgaaac ggcgcaaccg
     4741 ccgccgcctc gtaacggcaa gctccctggt tgccgcctcc tgcatcctgc tggcagccgc
     4801 actcagttcc gatcctgccg acagcaatcc cgcaccgcag gccggcgaaa ccggcgcaac
     4861 ggaaagccaa acggcaaaca cggcacaaac ccctgccttg aaatccgccg ccgaaaacgg
     4921 ggaaaccgcc gccgacaaac cgcaggactt ggcaggcgaa gacaagcctt ctgccgccga
     4981 cagcgaaatc agcgagcctg aaaacgtagg cgcgccgctg gtgctgatta acgaccggct
     5041 cgaagacagc aacatcaaag gtttggaaga atccgagaaa ctgcaacagg cagaaaccgc
     5101 caaaaccgaa ccgaagcagg caaaacaacg cgctgccgaa aaagtgtcgg caactgccga
     5161 cagtacggat acggtagcgg ttgaaaaacc gaaacgctct gccgaaccca aaccgcaaaa
     5221 agcggaacgc actgccgaag ccaagcccaa agccaaagaa accaaaaccg ccgaaaaagt
     5281 tgccgacaaa ccgaaaactg ctgccgaaaa aaccaaaccg gatacggcaa aatccgacag
     5341 cgcggtaaaa gaagcgaaaa aagccgacaa ggctgaaggc aaaaagacag ccgaaaaaga
     5401 ccgttcggac ggcaaaaaac acgaaacggc gcaaaaaacc gacaaagcgg acaaaaccaa
     5461 aaccgccgag aaggaaaaat ccggcaaggc gggcaaaaaa gccgccattc aggcaggtta
     5521 tgccgaaaaa gaacgcgcct tgagcctcca gcgcaaaatg aaggcggcgg gtatcgattc
     5581 gaccatcacc gaaatcatga ccgacaacgg caaagtttac cgcgtcaaat caagcaacta
     5641 taaaaacgca agggatgccg aacgcgattt gaacaaactg cgcgtgcacg gcatcgccgg
     5701 ccaggtaacg aatgaatagc ctccccattg ccgacctcct cgcctccgcc gtcatcgccg
     5761 cctgcatcgt catttccacg atgcgcggcg tgattgcgga agcaggttcg atggtggcat
     5821 gggtggtttc cttctttttt gccaaactct ttgccgcacc cttcgccgac ctcgcctttg
     5881 cctcgttcca accccgcctg tttgcattgg ctctgtcatt catttccctg ttcgtcattg
     5941 cctgtctgat ccagaaaatg ctccgttcgc tgctgaccgg cgcagtttcg gcggtcggtc
     6001 tgggctttgc caaccgcatt ttgggcggtg tattcggtgc attgaaaggc gttttgattg
     6061 ttaccctgct gatcatgctt gcttcaaaaa ccgacctgcc cgataccgaa gaatggcaac
     6121 agtcctatac cgtaccgttt ttcgtatcgc tttccgaagc ggtgttaaac catacggaca
     6181 acgcacccga atccctcgac gacgactaat ccgcatacgt ggcgtttcag acagcatacc
     6241 tgatttatgc cgtccgaaac gccttttctt tccttgacac accccgacag acaaagcgca
     6301 cctgcctgac tttacacaaa tattgtcaac aattcgggca aaaagccgcc gtttgcttta
     6361 taattccgtt tcacccttaa acctcgaatc ggagaagacg atatgtgcgg cgtattaggt
     6421 ttggtcagtc atgaacccgt gaaccagctt ctgtacgacg gtttgcagat gttgcagcac
     6481 agggggcagg atgcggcggg cattgcaacg gcggaaggcg gtaccttcca tatgcacaaa
     6541 ggcaaaggga tggtgagcga agtgttccgc acgcgcaata tgcgcgattt gaccggcaac
     6601 gccggcatcg cccacgtccg ttatcccacg gcgggcaacg ccggcagcag cgcggaggcg
     6661 cagcctttct acgtcagctc gcctttcggc atcgttttgg cgcacaacgg caacctcacc
     6721 aacactgccg aactgtatga aaacgtgtgt aacaaacacc tgcgccacat caacaccggc
     6781 tccgattccg aagttttgct caacgtattc gcgcacgaat tgcgccgcga agtctctaaa
     6841 aacgccgacc cgcaccggct caatgccgac aatattttca acgccgttgc cgaagtccac
     6901 cgcctggtgc gcggtgcata cggcgtggtt gccatgattg cgggctacgg tatgctcgcc
     6961 ttccgcgacc cttacggcat ccgcccgctg gcattgggtt cgcaaaccga cagcgaaggc
     7021 aggaaatcct atgccgtcgc ctccgaatcc gtcgccttca atgcgcttgc ctacgatttg
     7081 gaacgcgata tccggccggg cgaagcggta tttgtcggct ttaacggcac aatcatcgcc
     7141 cgacaatgca gcgaccgcgc caaactcagc ccctgccttt ttgaatatgt ttattttgcc
     7201 cgccccgact ccgtgattga cggcgtgtcc gtttaccagt cgcgcttgga tatgggcgtg
     7261 tccttggcgg aaaaaatcaa acgcgagctg cccgtggacg gcatcgacgt cgtgatgccc
     7321 attcccgaca ccagccgccc cagtgcaatg gaacttgccg tccacctcaa aaagccttac
     7381 cgcgagggtt tgattaaaaa ccgctatatc ggccgcacct ttatcatgcc cggtcagtcg
     7441 acgcgcaaaa aatccgtgcg ccaaaaactc agcccgatgg aaaccgaatt tgcaggcaaa
     7501 agcgtgttgc tggtggacga ctccatcgtg cgcgggacga ccagccgcga aatcgtcgaa
     7561 atggtacgcg cggcgggcgc gcgcaaagtc tatatcgcct ccgccgcgcc cgaagtgcgc
     7621 tatcccaatg tgtacggcat cgatatgccc acgcgcgaag agttgattgc caacgggcgc
     7681 agcgcggcgg aaatcgccgc cgaaatcggc gcggacggca tcgtgtttca agacttgggc
     7741 gatttggaag ccgtcgtcaa agcactcaac ccgaaaatcg aatccttcga ttcgtcctgt
     7801 ttcaacggca tttatcgaac cggcgacatc gatgatgcct acctcgaccg cctgtctgcc
     7861 gagaaatccg gctgcgccgg tctgaaaatc cacccgagca ggatggaaca cagcatcagc
     7921 atcagcgatg cgggcgacga agaataaggc ttcccaaacc gcgatgccgt ctgaaatccg
     7981 aacgttgggt tttcagacgg catttcccat atcggcatca catttcccgt ttcatccgca
     8041 cacaatatga gtaccgaaac caaaaactac attacgcccg ccggatggca ggcattgaaa
     8101 gacgagcttt atcaactggt caataaagaa cgccccgaaa tcgtccaaat cgtcaactgg
     8161 gcggcaggca acggcgaccg cagcgaaaac ggcgactatc tttacggcaa acgccgtatg
     8221 cgcgaaatcg accgccgcat ccgtttcctg accaaacgtt tggaggctgc cgtcgtcgtc
     8281 gatcccgaat tgcgcgaagc gaccgaccaa gtatttttcg gcgcgaccgt cggtctgttg
     8341 cgcggcgacg ggcgcgagca aaccgtcaaa atcgtcggcg tcgatgaaat cgataccgcg
     8401 caaaacaaaa tttcttggat ttcgccgttg gcgcgttgcc tgattaaggc gcgcgaaggc
     8461 gacgaagtgg ttttgaacac gccggaaggc cgtgaggaaa ttgaaatcct ttctgtcgaa
     8521 tacatcaaaa tcgactgatc gggaatgccg tctgaaacgg cacaagcgca ccgtttccca
     8581 aataaaggaa taccgaatga ggaaaatccg caccaaaatc tgcggcatca ccacaccgga
     8641 agacgcactg tatgccgccc acgccggcgc agacgcattg ggactggttt tttaccccca
     8701 aagcccccgc gctatcgaca tcattaaagc acaaaaaatc gccgccgcac tgccgccgtt
     8761 tgtcagcgtt gtcgcccttt tcgtcaacga aagcgcgcaa aacatccgcc gcatccttgc
     8821 cgaagtgccg atacacatca tccaattcca cggcgacgaa gacgatgcat tctgccggca
     8881 gttcgaccgc ccctatatta aagccattcg tgttcagacg gcatcagaca tccgaaacgc
     8941 cgccacgcgc ttccccaacg ctcaggcact gctgttcgat gcctatcacc cttcggaata
     9001 cggcggcacc ggacaccgct tcgactggac gctgttggcg gaatattcgg gcaagccgtg
     9061 ggtgcttgcc ggcgggctga cccctgaaaa cgtcggcgaa gccgtccgca tcaccggagc
     9121 ggaagcggtc gacgtatccg gcggcgtgga agcgtctaaa ggcaaaaaag accccgccaa
     9181 agtcgccgcc tttatcgcaa ccgccaaccg cctatcccgt taaagcaaca aaaattgccg
     9241 ccggaatgac ttatagtgga ttaacaaa
//
LOCUS       DAWXHA010000086         9222 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.086, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000086 DAWXHA010000000
VERSION     DAWXHA010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9222
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.086"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            329..819
                     /locus_tag="AABD07_001606"
                     /pseudo
     CDS             329..819
                     /locus_tag="AABD07_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581044.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            856..1122
                     /locus_tag="AABD07_001607"
                     /pseudo
     CDS             856..1122
                     /locus_tag="AABD07_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1346..1417
                     /locus_tag="AABD07_001608"
                     /pseudo
     CDS             1346..1417
                     /locus_tag="AABD07_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273019.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            1624..2247
                     /locus_tag="AABD07_001609"
     CDS             1624..2247
                     /locus_tag="AABD07_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFB2356097.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLISPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPDEGERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGDIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            2359..3741
                     /locus_tag="AABD07_001610"
     CDS             2359..3741
                     /locus_tag="AABD07_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFB2356098.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAIYAAS
                     LPGAEDNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLVVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PMIADVAGVRGLFMLTGILTVISIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTRLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMHSIWLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFAGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNRDGLQRALLQLEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            3745..4269
                     /locus_tag="AABD07_001611"
     CDS             3745..4269
                     /locus_tag="AABD07_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFB2356099.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYDEGYGQSQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
     gene            4642..5565
                     /locus_tag="AABD07_001612"
     CDS             4642..5565
                     /locus_tag="AABD07_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFB2356100.1"
                     /translation="MENQRPLLGFALALLAAMTWGMLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWHSFRLLLLGVTGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLVGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFVYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
     gene            complement(5630..7018)
                     /gene="fumC"
                     /locus_tag="AABD07_001613"
     CDS             complement(5630..7018)
                     /gene="fumC"
                     /locus_tag="AABD07_001613"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HFB2356101.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYRPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHSLGRLNDAL
                     KGLYELALGGTAVGTGLNSHPEYAEIAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNENCAAGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNDKSLRETAVGLGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(7162..9141)
                     /gene="tkt"
                     /locus_tag="AABD07_001614"
     CDS             complement(7162..9141)
                     /gene="tkt"
                     /locus_tag="AABD07_001614"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HFB2356102.1"
                     /translation="MSQLANVIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQTAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     AYPAFEIPQEIYDAWNAKEKGAKLEAGWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DEYVQTALKEVCAKAETVATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAAKAED
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGAYVISEAQGNAQAVIIATGSEVGLAVEAQK
                     VLAGQGIAVRVVSMPSTSVFDRQDAAYQAAVLPEGLPRIAVEAGHTNGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
BASE COUNT         1870 a         2344 c         2762 g         2246 t
ORIGIN      
        1 cggcattttt aatcgcccgc tgtttacagg cgcggggcgg gcgtggaaat acccgaaccg
       61 tcattcccga caacaccgca atctcgaaat tcgtcattcc cgcgcaggcg gaaatccgga
      121 cccccgacgc ggcgggaatc tatcggaaat gactgaaacc ccgcgtccta gattcccact
      181 tccgtgggaa tgacggttca gcaagcgtag gtcggatact tgtatccgac aaaaccttta
      241 acattcccat cattgcaatc cattgcagca atgtccaaaa tgtcgaattc aagaatccgg
      301 cctacaaaat cattccgagc ataatactat gaaataccgt cgtttttacc gcaatggcgg
      361 cacttacttt tttacggttg taaccaataa acggcagaag attttgaccg atgatgcggt
      421 gcgtttggct ttacggcagg cggtaatggc ggtgcgcgaa cggaatccgt ttgaaatttt
      481 ggcatgggtg ttgatgcccg atcatctgca taccatatgg cggctgccgg acaatgattc
      541 tgcttattcg gaacgctggc ggcaaatcaa gcggcacagc caatatttaa tcggcggcaa
      601 tctcaggctt tggaaaaacg cttttgggaa catactatcc gcggtgaggc cgattttgcc
      661 tgccattttg attatctgca tttcaatccg gtcaaacatg gctatgtagg acaaatttcc
      721 gattggcggt tttctacgtt tcaccgttat gtcaaacagg gtatttatcc gcataattgg
      781 ggtggcggca atgcggactt ttctattgaa tacgattgaa gtaatgtcgg attcgagaat
      841 ccgacctacg gaaaactgaa agagcatcgg ctgctggacg gcattatgcg caaagcccgc
      901 cgcaaccgcc cgctgccgga ggcgcaaacc aaacgcaacc gatatttgtc gaagacccgt
      961 tatgtggtcg aacaaagctt cggtacgctg caccgtaaat tccgctatgc ccgggcggcc
     1021 tatttcggac tgattaaagt gagtgcgcaa agccacctga aggcgatgtg tttgaacctg
     1081 ttgaaagcgg ccaacaggct aagtgcgccc gctgccgcct aaaaggcggc ccggatgcct
     1141 gattatcggg tattcaaggg ggattaaggg ggtatttggg tagagttagg agtgattggt
     1201 ggcggaaaca gccgaaaatc tgtgtcaggg tttcagctgt cgggagggaa gggaattttg
     1261 caaaggtctc aagatatagt ggattaaatt taaaccggta cggcaaggcg aggcaacgcc
     1321 gtaccggttt aaatttaatc cactatattt ccgcctgctg ccgcccgaaa agcgtaatgc
     1381 gctgatggtg ctgctgcaca atccggacga cggataaccg gtgaaaacgg gaaatgcccg
     1441 ggcggtgtcg tctgtgcctg tttggacaag cattcttgag ggcggtaaaa tcaaggtttg
     1501 cccgaaaagg gcagggcgat atgccgcgct tggattttgc gcgcggtttt tcgcgttgga
     1561 agcaatcatg tctgtttgaa tatttaatgc cgtctgaaac gtccggacgc acccccgttc
     1621 cttatgaaaa aaccgaccga taccctaccc gtcaatctgc aacgccgccg cctgctgtgt
     1681 gccgccggcg cgctgttgat cagcccgctg gcgcacgccg gcgcgcaacg tgaagaaacg
     1741 cttgccgacg atgtggcttc cgtgatgagg agttctgtcg gcagcgtcaa tccgccgagg
     1801 ctggtgttcg acaatccgaa agagggcgaa cgttggttgt ccgcgatgtc ggcacgtttg
     1861 gcaagattcg tccccgacga gggggagcgg cgcaggctgc tggtcaatat ccaatacgaa
     1921 agcagccggg ccggtttgga tacgcagatt gtgttggggc tgattgaagt ggaaagcgcg
     1981 ttccggcagt atgcgataag cggggtcggc gcgcgcggtc tgatgcaggt tatgccgttt
     2041 tggaaaaact acatcggcaa accggcgcac aacctgttcg atatccgtac caacctgcgt
     2101 tacggctgca ccatcctgcg ccattaccga aaccttgaaa agggcgacat cgtccgcgca
     2161 cttgcccgct tcaacggcag cctcggcagc aataaatatc cgaacgccgt tttgggcgcg
     2221 tggcgcaacc gctggcagtg gcgttgattt tgaacccgtg ccgcaaccga aatacggcga
     2281 atcctgtata atccgaaaat ctgttcactg gaagttcaga cggcattgca actgttgatg
     2341 ccgtctgaaa aattatttat ggcaagagac aaccgcatcc aaatgtttcc gcacgaatgg
     2401 cgcgccagta cgacgctttc cggcgtgtac gcgctgcgta tgctgggtat gttcctcgtg
     2461 ctgcccgttt tggcaatata tgccgcctcg ctgcccggtg cggaagacaa taaaacgctg
     2521 gtcgggctgg caatgggcat ttacgggctg acgcaggcat tgctgcaact gcctttgggt
     2581 atcgcttccg acaagttcgg gcgcaagaaa accatttatg tcgggctggt cgtgtttgcc
     2641 gccggcagct tccttgccgc cgccgccgat acgctgccca tgctggttgc cgcgcgcgcc
     2701 atacagggcg cgggggcggt cagtgctgcc gtaaccgcgc tgcttgccga cttgacgcgc
     2761 gacggcgtgc gtacccgcgc gatggcgatg atcggtttga gtatcggtct gacgttttcg
     2821 gtcagcctgg tggttgcgcc gatgattgcc gatgtggccg gcgttcgcgg actgtttatg
     2881 ctgaccggca ttctgaccgt catcagcatc ggcgtagtgg cgtggatgac tcctgatccc
     2941 gaagtttcca agctgcatga ggacacgcag gcgcagcctt cgcgcatagg cgaagttttg
     3001 aaaaaccgta ggctgctgac gctcgatttc ggcattttcg ccctgcacgc cgcgcaaatg
     3061 gcattgttta ccgcgctgcc tttcgcgatg acccggctcg gtttggaaaa aatccagcat
     3121 tggaaagtat atctgccctc gaccattacg ggcttggtgg tgatggttcc gctgattatc
     3181 gtcggcgaaa cgcgcaacaa gctcaaacag gtttttgttt tgggcatcgt ctgcatcgcg
     3241 gcggcgcagc ttggtttgct gtccggaatg cactcgattt ggctgattac cgcttatctg
     3301 gttgtttact ttatcggttt taatgtgttg gaagcgagcc tgccgtctat ggtttccaaa
     3361 atcgcgccgt ccgacctgaa gggtacggcg atgggcgtgt acaacacgat gcagtcgctc
     3421 ggactgtttg ccggcggcgc ggcaggaggc ttgctgtttc aaaaatacgg ctttgccggc
     3481 gtgtttgcct tttgcagcat attgatgctg ctgtggctgg tgattgccgt tttatcgccc
     3541 gcgcccaagc ccgtcaaaaa cctcagttac cctgtcggcg gcgtgtggca gggcaatcgg
     3601 gacggtttgc aacgcgccct gttgcagttg gaaggcgtgg aagacatcgg tttcagtttc
     3661 gacgggcaga ccgtctatct taaagtgttg cagaagggtt tcgatcaggc tgccgctgaa
     3721 aaaatcatta caggagtttg aaaaatgtca ttgaacaaag tcatccttat cggccgcctc
     3781 ggacgcgatc ccgaagtgcg ctatatgccc aacggcgagg cagtgtgtaa tttcagcgtc
     3841 gccaccagcg aaacttggaa cgaccgcaac ggccagcgcg tagagcgcac cgaatggcac
     3901 aacatcacga tgtaccgcaa actggcggaa attgccgggc aatacctcaa aaaaggcggg
     3961 ctggtttatc tggaaggcag aatccaaagc cgcaaatacc aaggcaaaga cggcatcgaa
     4021 cgcaccgctt acgatattgt cgccaatgaa atgaaaatgt tgggcgggcg caatgaaaac
     4081 agcggcggcg cgccttacga tgaaggttac ggtcagagtc aggaggctta ccaacgcccc
     4141 gctcagcaaa gccggcagcc cgctcccgac gcgccgtccc atccccaaga agcacccgcc
     4201 gcgccgcgcc gccaacccgt gccggccgcc gccccggtcg aggacattga cgacgacatc
     4261 ccgttctgaa ttttacggcc ggacatcctc gcggagggaa gtcataaagg acggaaaaac
     4321 cttaaacctt acggggcaag gtttctcttt tttgcatttg ggccggcttg ttgccgcccc
     4381 ctgcgttggg cgtaacgttg cgattgcgcc gttcgggcgt tttgaggcaa gcgatgcctg
     4441 ccgcactccc ccgctgtttt cagacggcat tttaaaattg aggcggtgtt ttcaaatagt
     4501 gcgaagcaat agtcgggctt cagccagttt gtttgaaatc aaagggttgg aatcaaacgc
     4561 caaacgcttg aaccatcatt gcccgatgcg gcaaaccggc atcgtccggc aatacggttg
     4621 tttaaaaata gggaaatcag gatggaaaac caaaggccgc tcctaggctt cgcgttggca
     4681 cttttggcgg cgatgacgtg ggggatgctg ccgattgccg tgcggcaggt attgaagttt
     4741 gtcgatgcgc cgacgctggt gtgggtgcgt tttacagtgg cggcggcggt attgtttgtt
     4801 ttgctggcat tgggcgggcg gctgccgaag cggcgggatt tttcttggca ttcattcagg
     4861 ctgctgctgc tcggcgtgac gggcatttcg gcaaactttg tgctgattgc ccaagggctg
     4921 cattatattt cgccgaccac gacgcaggtt ttgtggcaga tttcgccgtt tacgatgatt
     4981 gttgtcggcg tgttggtgtt taaagaccgg atgactgccg cgcagaaaat cggtttggtt
     5041 ttgctgcttg tcggtttgct tatgtttttt aacgacaaat tcggcgagtt gtcgggtttg
     5101 ggcgcgtatg cgaagggcgt gttgctgtgt gcggcaggca gtatggcctg ggtgtgttat
     5161 gccgtggcgc aaaagctgct gtcggcgcaa ttcgggccgc aacagattct gctgttgatt
     5221 tatgcggcaa gtgccgccgt gttcctgccg tttgccgaac cggcacacat cggaagtttg
     5281 gacggtacgt tggcgtgggt ttgttttgtg tattgctgct tgaatacgtt aatcggttac
     5341 ggctcgttcg gcgaggcgtt gaaacattgg gaggcttcca aagtcagcgc ggtaacaacc
     5401 ttgctccccg tgtttaccgt aatattttct ttgctcgggc attatgtgat gcctgatact
     5461 tttgccgcgc cggatatgaa cggtttgggt tatgtcggcg cactcgtcgt ggtcgggggt
     5521 gcggttacgg cggcggtggg ggacaggctg ttcaaacgcc gctagttcgc aggcaacgga
     5581 aaatgccgtc tgaacgaggc ttcagacggc attttatttg agggaaggat tagcgcggat
     5641 gaaccatatc ggcagggacg accagttcgt caaactcttc gcccgtcagc aagcccaacc
     5701 caacggcagt ttcgcgcagc gatttatcgt ttttgtaggc ggttttggcg actttggcgg
     5761 cgttttcgta gccgattttg cggtttaacg cagtaaccag catcagggaa tggtgcagga
     5821 aatagtcgat tttttccggt acgggttcga tgccggcggc gcagttttcg ttgaagctgt
     5881 tgcacgcgtc gcccaagagg cggatggatt gcaagaggtt gtaggcgata acgggcatat
     5941 agacgttcag ctcgaaattg cccgacgcgc ccgccatacc gatggtaacg tcgttgccga
     6001 acacttggca gcacaccatc gtcatcgctt cgcattgggt cgggttgact ttgcccggca
     6061 taatggacga acccggttcg ttttcgggga ttttgatttc gcccaagccg cagcgcgggc
     6121 cgcttgccag ccagcggatg tcgttggcga ttttgttcag gcttgccgcc agcgttttca
     6181 atgcgcccga agcggcaacg gcggcatcgc gtccgcccaa ggcttcaaat ttgttcggcg
     6241 cgctgacaaa cggcaggccg gacagttcgg cgagtttggc ggcggctatt tcagcgtatt
     6301 cgggatggct gttcaaaccc gtaccgaccg ccgttccacc caaggcgagt tcgtacaaac
     6361 ctttgagcgc gtcgttcaga cggcctaagc tgtggtcgag ttgggaaacg tagccggaaa
     6421 attcttgtcc caaagtcagc ggcgtcgcat cctgcaagtg ggtacggccg attttgacga
     6481 tgggggcgaa ggcttgggct tttttgtcca atgtatcgcg caaggctttt accgccggaa
     6541 taaggtggcg gttgatttca atcgcggcgg cgacgtggat ggcggtcggg aacgcgtcgt
     6601 tggtcgattg cgcgtggttc acatggtcgt tggggtggac gggccggtac gccgccaaac
     6661 ccgtacctgc aatttcgttg gcgcggtttg ccagcacttc gttcatgttc atattggact
     6721 gcgtaccgga gccggtctgc caaaccacta aggggaactg cccgtcgagc ctgccgttca
     6781 gtacatcatc cgccgcctgc gtaatcaaat ccgcctgttc gggcttaatc ctgccgaggg
     6841 aaacattggt cgcggcggcg gcttttttca ccaacgccaa agcgtaaatc agcggctgcg
     6901 gcagggtttc gccgccgatt ttgaaattgt tgcggctgcg ctgggtctgc gcgccccaat
     6961 aggcttcgga cgggacttcg acattgccca tcgtgtcgtg ttcggtgcgg gtgttcatac
     7021 gtttctcctt ttgaaatgtg aataagagtg attcgcaaat attataatgg agattggcgg
     7081 aatgaggaag catcaaggcg ggagggcaaa aaaatgccgt ctgaaaagca ttcagacggc
     7141 atttgatgcg gcggctgagg tttacagcac ggatttcacc gtatcaacca cattgtccac
     7201 ggtaaagccg aatgctttga acagcagatc ggcaggggcg gattcgccga agcggttgat
     7261 gccgacgact gcgccgttca gtccgacata tttgtaccag ccgttggtgt gtccggcttc
     7321 tacggcgatg cgcggcaggc cttccggtag gacggcggct tgataggcgg cgtcttggcg
     7381 gtcgaagacg ctggtggacg gcatggaaac gacgcgcacg gcaatacctt gtcctgccaa
     7441 tactttttgc gcttctacag ccaatcctac ctcggaaccg gtggcaatga tgacggcttg
     7501 ggcgttgcct tgggcttcac tgattacgta agcaccgcgt ttgatgtcgt tcagttgttg
     7561 ctcgctgcgt gcttggaatt tcaggttttg acggctgaaa atcaggcagg acgggtggtc
     7621 ttcggctttt gccgcttctg cccaagcgac cagagattct gcggtgtcgc acggccgcca
     7681 tacgtccata ttcggaatca ggcgcagggt ggcggtttgc tcgataggct ggtgggttgg
     7741 gccgtcctcg cccaaaccga tggaatcgtg ggtgaatacg aagacggggt tgattttcat
     7801 cagtgccgcc atgcgtaagg cgttgcgttc gtattcgctg aacatcagga aagtcgcgcc
     7861 gaagggtttt acaccgccgt gcaataccaa accgttcata atcgcaccca taccgaactc
     7921 gcgcacgccg tagtggatgt agttgccgcc tttgtcgcgg gtaacggaga cgctgtttga
     7981 ccagtcggtc aggttggacg gggtcaggtc ggcagaaccg cccaccagtt cgggcagctc
     8041 ttttgccaag atttcgatgc tgttttggct ggctttgcgg gtggcgacgg tttccgcttt
     8101 ggcgcacact tctttcaatg ccgtctgaac gtactcgtca aagttttccg gcagcttttt
     8161 atccatgcgg cgcacgaatt ctgcggcttc ggcaggatat ttggcttgat attgcgcgaa
     8221 cagttcgttc catccggctt ccagtttcgc gcctttttct ttggcattcc acgcatcgta
     8281 aatttcttgc gggatttcaa acgcaggata agcccaaccc aaatgtttgc gcgtggcttc
     8341 gatttcgtcc gcacccaaag gcgcgccgtg ggttttgtgg ctgccttctt tgttggcgct
     8401 gcctttgccg attaaggttt tgcagcagat gatggacggc ttgccggttt cggcgcgggc
     8461 ggcttcgatg gccgtctgaa tggcggcggt gtcgtggccg tttacgttgg gaacgacgtg
     8521 ccagccgtag ctttcaaagc gttgcgggat gttttcggta aaccagccgt ccactttgcc
     8581 gtcgatggag atattgttat cgtcatacaa aacaatcagt ttgcccaagc ccaaggtgcc
     8641 ggcgagtgag caggcttcgt gcgatacgcc ttccatcagg cagccgtcgc ccataaagac
     8701 gtaagtgtag tgatcgacga tgttcaaacc gtctttatta aattcggcgg caaggatttt
     8761 ttctgccaat gccatgccca ctgcgttggc aataccttgc cccaacgggc cggtcgtggt
     8821 ttccacgccg tcggtgtagc cgtattcggg atggccgggg gttttgctgt gcagctggcg
     8881 gaagtttttc agatcttcaa tgctcaggtt gtagccggtc aggtgcagca ggctgtacaa
     8941 cagcatagac gcatgaccgt tggagaggac gaagcggtcg cggttgtaga atttgggatt
     9001 ggcgggattg tgattgagga atttcgtcca caatgtttcc gccatttccg ccatacccat
     9061 aggcgcgccg gggtggccgg aattggcttt ttgaacggca tcggccgaga ggaagcggat
     9121 tacgtttgcc agttgagaca ttttgtattt tccttgctgg tgtttcggat aagtggataa
     9181 tcggaaggcg ttgattatcg cccgattcgc ttatgctttc aa
//
LOCUS       DAWXHA010000087         9185 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.087, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000087 DAWXHA010000000
VERSION     DAWXHA010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9185
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.087"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(102..2954)
                     /gene="gcvP"
                     /locus_tag="AABD07_001615"
     CDS             complement(102..2954)
                     /gene="gcvP"
                     /locus_tag="AABD07_001615"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HFB2356103.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLAAVGEKSMDDFVGNTLPQ
                     SIRMPSELDLPEALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQGCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVSDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPKGVKRIANRIHTLASVFADALVSDGLKVVHEVFFDTVTVDFGSK
                     EKADQVFAAALESGYNLRSVNNTQVAAAFHETSVYEDLADLYRAFTGKDTFTFADDVK
                     GRLNAELLRQDDILQHPVYNSYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWTEFSDIHPYAPEAQTAGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAHRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHTLTDTHSASAGQT
                     SVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRIAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKSIRREVQKVIDGEWPKDDNPLVNAPHTAADITGEWAHPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(2985..3344)
                     /locus_tag="AABD07_001616"
     CDS             complement(2985..3344)
                     /locus_tag="AABD07_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356104.1"
                     /translation="MTDRPNLLRIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNVVFPLPAHPLAWLVPAGFMVLGGGFPLSLPLVALLVPTCCILARCPPLS
                     RLLCHPCPNHPMSKNSA"
     gene            3292..3522
                     /locus_tag="AABD07_001617"
     CDS             3292..3522
                     /locus_tag="AABD07_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HFB2356105.1"
                     /translation="MISACPGFIRSRFGRSVMPSEPAGRLSQKTPYRCNFMRLYGVGF
                     ALQTAYASRSSLVSQSVHDYINNLGADKPLFI"
     gene            complement(3515..4156)
                     /locus_tag="AABD07_001618"
     CDS             complement(3515..4156)
                     /locus_tag="AABD07_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HFB2356106.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPEEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGNNNLKSDQIHANGKGYRKFAENLNQFLRKHGFR"
     gene            complement(4146..4697)
                     /locus_tag="AABD07_001619"
     CDS             complement(4146..4697)
                     /locus_tag="AABD07_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HFB2356107.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIKDDNGLFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDIDTVAAFGEADIERLLTDAGIVRNRLKIDAAIF
                     NARQIQALQQEHGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRKTLKYHPKWLDAV"
     gene            complement(4701..5219)
                     /locus_tag="AABD07_001620"
     CDS             complement(4701..5219)
                     /locus_tag="AABD07_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HFB2356108.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRTFVPAS
                     RSGSTDKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5219..6880)
                     /gene="pqiB"
                     /locus_tag="AABD07_001621"
     CDS             complement(5219..6880)
                     /gene="pqiB"
                     /locus_tag="AABD07_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HFB2356109.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSGEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEIANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGGKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKLADLLDKFNNLPLDKTVAELN
                     GSLAELKSALKSANAALSSIDKLVGNPQTQNIPNELNQTLKELRITLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNNSSKDPIPKGSR"
     gene            complement(6873..8333)
                     /locus_tag="AABD07_001622"
     CDS             complement(6873..8333)
                     /locus_tag="AABD07_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HFB2356110.1"
                     /translation="MGLSAGGAAAQKIFLPDTKGLFILPNLPVLHPDWVYRFFSFIMP
                     PFIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRTDVPQLDKGEAAFCPR
                     CGHKLFRVGSHPFSGPPAYAAASLILMAFAYSMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAKVRFGPAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGNN
                     AVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVVLYFPA
                     NILPIMISSNPAATEANTIFSGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLIA
                     AARFALPAGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD"
     gene            8518..9147
                     /locus_tag="AABD07_001623"
     CDS             8518..9147
                     /locus_tag="AABD07_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HFB2356111.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDPELNKAISELEYMARYDAVTQDLKDLGEEPYKFDKELPHE
                     TGNKAVGWLYCAEGSNLGAAFLFKHAQKLDYTGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAQEAFAFYKVILRETFGLPEGTEAPEGMMPHRH"
BASE COUNT         2044 a         2373 c         2622 g         2146 t
ORIGIN      
        1 agttatagtc gagatacgtg tatcggtgca accggtctgc cgttgacgaa aatgccgtct
       61 gaaagtgttt cagacggcat ttgtcttcgg ggtttcaaca gtcagtcttc ataattttcc
      121 atcggcgggc agctgcacac gaggttgcgg tcgccgtaca cgtcgtccac gcggttgacg
      181 aagggccaga acttgtgttc gcgcacgaag ggcagcggga agacggcttc ttcgcgagag
      241 tacggatgcg cccattcgcc ggttatatct gcggcggtgt gcggcgcgtt gaccagtggg
      301 ttgtcgtctt tcggccattc gccgtcgatg actttctgca cttcgcggcg aatggatttc
      361 agggcggcga tgaagcggtc gagttcggct ttgctttcgc tctcggtcgg ttcgatcatc
      421 agcgtgccgg caacagggaa ggaaaccgtc ggcgcgtgga agccgtagtc catcaggcgt
      481 ttggcgatgt cggtttcggt gatgccgctt tcggctttga gcggacgcaa atcgacgatg
      541 cattcgtgcg cgatgcggcc gtttttgcct gtatacagaa tcggatagtc ttcgctcaag
      601 cgtttagcga catagttggc gttgagcaat gcccagcgtg ttgcctgttc catgccttgt
      661 ttgcccatca tggtcaggta catccaagta atcggcagga tggatgcaga accgaaggct
      721 gcggcggcaa cggaggtttg cccggcactt gcgctgtggg tgtcggtcag ggtatgcccc
      781 ggtgcgaacg gggcgaggtg ggctttcaag ccaatcggac ccatgcccgg gccgccgccg
      841 ccgtgaggga tacagaaggt tttgtgcagg ttcatgtgca acacgtccgc accgacttcg
      901 gcgggctgca tgatgccgat ttgggcattg aggtttgcgc cgtccatgta aacctgtccg
      961 ccgttttcgt gaatgatccg gcagatgtcg cggatgcctt cttcgtacac gccgtgtgtg
     1021 gacggatagg taatcatgat ggcggacaag gcatcgcggt gttgttcggc tttggctttc
     1081 aaatcgtcaa tattgacgtt gccgtgttcg tcggtatcga cgacgacgac tttcaaaccg
     1141 agcatggcgg cggtggcggg gttggtgccg tgggcggatt tgggaatcag gcagatgttg
     1201 cggtgtgctt cgccttgggc ttcctgataa cggcggatgg cgagcatacc gctgtattcg
     1261 ccttgtgcgc cggagttggg ctggaaggaa atcgcgtcaa agccggtgat ggctttcagg
     1321 ctgttttcca tatcagcaag caattcgcgg tagccggcgg tttgcgcttc gggagcgtaa
     1381 gggtggatgt cggagaactc agtccaagta atcggcaaca tttccgcagt cgcattgagc
     1441 ttcatggtgc agctcccgag cgaaatcatg ctgcggttca tagccaagtc gcggtcttcg
     1501 agttttttca ggtagcgcaa catttcgtgt tcggtgtggt aactgttgta cacaggatgt
     1561 tgcagaatgt cgtcttgacg cagtaattcg gcgttcagac ggcctttgac atcatcggca
     1621 aatgtgaacg tatccttgcc ggtaaacgcg cggtacaaat cggccaaatc ttcgtatacc
     1681 gacgtttcat ggaatgcagc cgcaacttga gtattgttga cgctgcgcag gttgtaaccc
     1741 gactccaaag cagcggcaaa cacttggtct gctttctctt tgctgccgaa atcgacggta
     1801 acggtatcga agaagacttc gtgaaccact ttgaggccgt ctgaaaccag cgcgtcggca
     1861 aagacggaag ccagtgtgtg aatgcggttg gcgatgcgtt tcacgccttt ggggccgtga
     1921 taaacggcgt acatgcccgc caagttcgcc agcaatgcct gtgcggtaca aatattggat
     1981 gtcgcttttt cgcggcggat gtgttgttcg cgggtggaca aagccatgcg caaggcaggt
     2041 ttgcccgatg cgtctttgga tacgccgatg atgcggcccg gggcggagcg tttgaactcg
     2101 tctttaaacg cgaaataagc ggcgtgcgga ccaccaaagc ccatcggtac gccgaaacgt
     2161 tgggtgttgc ccaaagcaat atccgcgccc aattcagccg gagatttcag caaaaccaag
     2221 ctcatgatgt cggcggcaac agcaacgatt gtgcctttgg ctttcagacg gccgataacg
     2281 tcctgcaagt cttgcacgtc gccatcttta ccgacgtatt ggaacagcgc gccgaagtat
     2341 tcgccttcat ccgcttgggc aaaatcgctg accaccagct cgaagccgaa atatttggcg
     2401 cgggttttca tcacgtccaa agtttgcgga tacacgcgcg catccacaaa gaaacgctcg
     2461 gatttcactt tgcccacgcg gtgcgccatc gccatcgctt cggcggcggc ggtcgcttcg
     2521 tctaacaaag acgcgcctgc cacagggaaa ccggtcaaat cgatgcaccc ctgctggaag
     2581 ttcaacaacg cttccaaacg accttgggca atctccgcct gatacggcgt gtaggcggtg
     2641 taccagcccg ggttttccaa tacgttgcgc aaaatcacgt tcggcacgcg ggtcgggtaa
     2701 taacccaagc cgatatagga cttgttgatc acgtttttag acgcgatgcc tttcaatttc
     2761 gccaatgcgt ccgcctcggt cagggcttcg ggcaggtcga gttcggacgg catacggatg
     2821 ctttgcggca aggtgttgcc gacaaagtcg tccatgctct tctcgccgac agcggcaagc
     2881 aacgccgctt cgtcgccgaa actcaaatgg cgcgcggcaa attcgttggg gttgaacagt
     2941 tcggacagtt tcatttctac tccttcgggt ttgtagggct gccatcaggc agaattttta
     3001 gacatcggat gattcgggca agggtggcac aaaaggcggg ataatggcgg acaacgcgcc
     3061 agaatgcagc aggtcgggac aagcagcgcc acaagcggca gcgataaggg aaagccgccg
     3121 cccaaaacca tgaaacctgc aggcaccagc caagccaagg gatgagccgg aagcggaaaa
     3181 acaacattga gcagaaccaa aatcacgaca aacagcggca gccccgccat caggttggca
     3241 cgcctgtatg ttgcgtacgg gtcggatgct tcttcaggtt cgcaatattc catgatttca
     3301 gcctgtccgg gctttatccg cagcaggttc ggacggtcgg tcatgccgtc tgaaccggca
     3361 ggccgtcttt ctcaaaaaac gccataccgc tgcaacttca tgcggctgta tggcgtaggt
     3421 tttgcacttc agacggcata tgcgtcccga agcagtttgg tgtcccagtc ggttcatgat
     3481 tatataaaca acttgggtgc ggataaacct ttgtttatct aaacccatgt tttctcaaaa
     3541 attgattcaa attttcggcg aatttccgat agcctttgcc gttggcgtgg atttggtcgg
     3601 atttcagatt attattgccc aaaatttccg cccacgcgcc gccgaacaac ggaatgccgt
     3661 attcctcgga caaatcctca tacagcggat ggtcgctcaa atgcccgaac aacgcgccca
     3721 gtgtgatgtg cggcacgccg acgaggacgg cgggaatgtt ttccttttgc acggtttcga
     3781 tgattttcgc gatattggcg cgggtctgct cctcgggaac tttgcgcaga aagtcgttgc
     3841 cgcctatgcc gacaatcaca agcttgggtt tgcgtgccaa cagcgcgggc aggcgcgata
     3901 gggcttgcgc ggacgtatcg cccgatacgc cgccgttgac aatattccaa cccgtcagtt
     3961 tttgcagttg cgcggggtag gattcgccgg ggtttgctcc gtagccgaag gtgagcgaat
     4021 cgcccaaggc aagcacggtg cttccttcgg gaattttggc gtgggttcgg gcggattttc
     4081 tgccgcaggc ggtaagaagc aacgcgcctg cgccgaggag gaaggttctt ctgttcattg
     4141 gtttttcaga cggcatcgag ccatttcggg tggtatttca gggttttacg gtaaaccgga
     4201 cagctttcgg cgtgcgcgcc tttgaggtag ccggtactca tcagaaattc gccgacgatt
     4261 tcgccgccga cgaatttgaa atgtttttta aagagtttga cccattcgtc tttgcttcgc
     4321 ggatggtgcg cgtcgagcca gttcttgaac gaaccgtgtt cttgttgcaa cgcttggatt
     4381 tgccgtgcat tgaaaatggc ggcatcgatt ttcagacggt tgcggacaat acccgcatcg
     4441 gtaagcagcc gttcaatatc ggcttcgcca aatgcggcga ccgtatcgat gtcgaaacct
     4501 tcaaatgccg tctgaaacgc ctgccgcttc ttcagcatca gcgtccaact taatcctgcc
     4561 tgattgattt ccaacaccag ccgttcaaac agtccgttgt cgtccttaat cggaaaaccg
     4621 tattgcgtat cgtggtaatg tttgttcggg ttgtcggtgt tttcgggaag tgaggcggca
     4681 aattcgcaat agttcacggt ttactcgacc atctgttgcg ccgcctgttt cagtccctgt
     4741 tcgagtgcgg cggtcatggc ggcgtagccg tcaccctgct gttcggtttc gatatggaag
     4801 ggtctgttcg taccgtcggg taggacggcg tagccgctga tgagggtttt gcccgtgtag
     4861 ctgccttgga atgcgtcgat atagaccgtc catttgtcgg tactgccgct gcgtgaggca
     4921 ggaacaaagg tgcgtgtgct gtccaaacgg ttgaatgcat tgctcaacgc cgcttcgagc
     4981 atatcgtcca aggtgtctgc ccaaacatgg ttttgtgcgg tgttgatgcg gtaggggtcg
     5041 gtttgataga ccagtccgcc gcgtttgagc ggttcggcaa gacggacttc gacggcggtt
     5101 tcgccgcctt gcgttgcagg acggatgtag cggctgtcgg gcaacacgaa atattgtgtg
     5161 ctttgcacag taccgcaggc ggcaagcgtc agggcggcgg cgatggggaa aaggcgcatt
     5221 atcggcttcc tttcgggata gggtctttgc tgctgttgtt gaaaatcagt gcgttgggtt
     5281 tttctttcaa agtgttaatg acgggttgaa cgtcttttaa ggttttgtcc aaactttgca
     5341 gcgtattttg tacgtctccg tagataggcg attgaggcga tacgccttgc agggttatgc
     5401 gcaactcttt cagagtttgg ttcagttcgt tcgggatgtt ttgcgtctgc ggattgccga
     5461 ccagtttgtc aatggagctt agggcggcat tggcggattt gagtgcggac ttgagttcgg
     5521 cgagcgagcc gttcaattcg gcaacggttt tatccaatgg cagattgttg aatttgtcca
     5581 gcaaatccgc caatttggcc tgcaagtcgt ccaaaccgcc gccccgtgtg gcgatgacgg
     5641 tatcgcctgc ataaacggta tgcggtcgca gcttgggcga ggcggaaggc tgatcgttca
     5701 actcaatcat tttgccgccg gtcagcaggt tgttgctgga gatggtggcg gtcaggcctt
     5761 tgtttaaggc cgtctggaat tgttgtttcc aatgctcttt gctttgctcg tcggcattga
     5821 tttccaaacg ggaaggctcg atgcggatgc gtacgggaat ccagccgttt tcaaacaggt
     5881 gcaggctgtc attgcggtca aaataaggga catcggaaac catgccgaca ttcagccctt
     5941 tgtattcgac aggcgaaccg acggtcagtc cgcgcacgga ttgtttgaaa aacgcggtgt
     6001 agtacagcga gcggtcgtca ggcaggttgg cgatttcgct gcggctgtcg taaagcgtga
     6061 agctgtcctc gcttttgacg tttttactgt ttttggtttt cggcgaatca aatgaaatcg
     6121 cgcctgacag cagggcaggc agaggggcgg aattgagttt gatgccgctg cctgtggttt
     6181 cgatattgat gccgctttcc agccaaaaac ggctggcgga atgaatcagt ttgtcgttgg
     6241 ggctttggat gaagatggtg taatgcacgc tttggtcgga cgggtcgaaa tgcgcgcttt
     6301 cgatttgccc gaccataaag ttttcataca aaacagggct gttgacgttg aggatgcggt
     6361 cgtttttacc aatcaaattc aagcgcagcc cgctttgccc gatggcggta acgggcggaa
     6421 tgtcctgcac ttggaacacg tcttttgcct cgccgctttt gccgggtgta aaggcgatgt
     6481 acgaacccga aagcagcgta cccaaaccgg ttacgccgct ttggtcgata cgcggcttga
     6541 ccacccagaa ctgggtatcg ctgcggatga ggccggatac gtccgcattg agttgggcag
     6601 taacttccac gcctttttgg tcgtcgcgca gtttgattcg ggtaacgcgt ccgacatcga
     6661 tgctcaatac cttaatgacc gtattgttga cttcgatgcc ttccgcgctg tccatcaaga
     6721 gcgtaaccac aggccccctg ttgcggattt ccttaaccca aagccagccg ccggcaatca
     6781 gcgcgatcag cgggaccagc cagacggcgg agaggaaggt gttgtttttg cggacgcgtg
     6841 cttgagcgtg tccgtttgga ggagggctgt tgtcagtcat atttttccgt ttcgttgaaa
     6901 gcaatgccgt ctgaagcgcg tttgtcccaa agcaggcgcg ggtcgaaata ataggcggac
     6961 agcatcgtca aaatcacgac caggcagaaa tagactgccg cactgcccgg aatgacgcgc
     7021 gcggcataag tgtggaacga acacatcaaa ataataatca caaaaatatc aatcatcgac
     7081 cagcggccga ccgcttcggt gatgcggtag aggtgcgaca atttctttgc gcccgccggc
     7141 aaagcgaacc gtgccgccgc aatcaaaacc gacattgccg caatcttcag caccggcacc
     7201 aaaatactcg cgctgaaaat aaccgccgca atcagcctgt cgccctcgtc ccacatataa
     7261 gcgatgccgc taaagatggt gttggcctcc gtggcggcag gattggacga aatcataatc
     7321 ggcaggatat tggcagggaa atacaaaaca accgccgccg tcagaaacgc cgacgaaata
     7381 ctcagacttt tcggccgtcg gcggtacagt tccgcgccgc acaccccgca gggggattcg
     7441 gcactgtcgc ggaaatacag gcagcggctg caacaggttt tgccttccga tgccgtctga
     7501 accgcattat tccccgtcag ccgcccgatt tggaaataca cccaatgctg gggaaccgat
     7561 accgaagtcc gaatcagcat aaccgacagc gcgaacatca gataaaacgc cggcccgaag
     7621 cgaacctttg ccacagacga gagcttgata tacgccacca gagtggaaac aaaaaacaca
     7681 tccaccatca tcgcctgcct caagcgcacc atcacacgcg ttgccaaacg cagcgcagga
     7741 tacgcctgtt tccgtatcag cgcggcatag acatacaggc acagcagcag aaacagaacc
     7801 ggcgcgccga aagtcagcac aaacatcact tcggccaaaa aaccataatc ctgaaacacc
     7861 atcaggcgca tcatctcggg cagcgaaagg acggatgccg cacccggtat cccgacctcg
     7921 atatacgtca tactgtaagc aaacgccatc aaaatcagcg aagccgccgc ataggcgggc
     7981 ggaccggaaa aagggtggct gcccaccctg aagagtttgt gtccgcaacg gggacagaac
     8041 gccgcctctc ccttgtccaa ctggggcacg tctgtacggc agccgcattc cgggcaatct
     8101 accgtatgcg gcggcagggc ttcgtcgcgg cagttgccgc gaaggctgtg ggggatattt
     8161 tcggcaaacg gcttcatcgg gaaagtggca aatataaatg gcggcattat aaaggaaaaa
     8221 aagcgataca cccaatcagg atgcaaaacc ggcaggttcg gcagtatgaa caaacccttg
     8281 gtgtccggca aaaatatttt ttgagcggct gcccctccgg ccgacaagcc tatttgataa
     8341 aaccccgatt ttgtaaataa tcataaaata cccgcttaaa aatataacgc aaatgatatt
     8401 ttttcgtaaa atatgtgata ataaatttcg tttatgattc tttattattt ttgtatgcgg
     8461 gcaagtccgg attttgcccg caccgcatcc ttatccctta ccgacaaagg agaacttatg
     8521 agcgaaaccg aaaaccaagc cctgacgttt gccaaacgcc tgaaggcgga taccacggcg
     8581 gttcacgaca gcgtggataa cctcgttatg tctgtccaac cgtttgtcag caaagaaaac
     8641 tacatcaaat ttttgaaact gcaatccgtg ttccacaaag cggttgatca tatctataaa
     8701 gaccccgagt tgaacaaagc catttccgag ctggaataca tggcgcgata cgatgccgta
     8761 acgcaagact tgaaagactt gggcgaagag ccttacaaat tcgacaaaga attgccacac
     8821 gaaaccggca acaaagccgt cggctggctt tattgcgccg aaggatccaa tttgggcgcg
     8881 gcatttttgt tcaaacacgc gcaaaagctg gattacaccg gcgaacacgg cgcgcgccac
     8941 ctcgctccgc atccggacgg gcgcggcaaa cactggcgcg ccttcgtcga gcacctgaat
     9001 gccctgaact taactccgga agcagaagca gaagccattc aaggcgcgca ggaagcgttt
     9061 gctttctata aagtgattct gcgtgaaacc ttcggtttgc cggaaggaac agaagccccc
     9121 gaaggcatga tgccgcacag acattaaaaa tggggctgta ctagattatc cctaaattcc
     9181 acacc
//
LOCUS       DAWXHA010000088         8801 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.088, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000088 DAWXHA010000000
VERSION     DAWXHA010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8801
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.088"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            99..2043
                     /locus_tag="AABD07_001624"
                     /pseudo
     CDS             99..2043
                     /locus_tag="AABD07_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251592.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(2111..2331)
                     /locus_tag="AABD07_001625"
                     /pseudo
     CDS             complement(2111..2331)
                     /locus_tag="AABD07_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005626134.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
     gene            complement(2372..3739)
                     /locus_tag="AABD07_001626"
     CDS             complement(2372..3739)
                     /locus_tag="AABD07_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HFB2356112.1"
                     /translation="MPDLHTEFSRLLPADEIAEPSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVILPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAKLSSEFSKLPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAVPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(3849..4115)
                     /locus_tag="AABD07_001627"
     CDS             complement(3849..4115)
                     /locus_tag="AABD07_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356113.1"
                     /translation="MKKSLFAAALLSLALAACGGEKAAEAPAAEASSTEAPAAEAPAA
                     EAPAAEAPAAEAPAAEAPAAEAAATEAPAAEAPAAEAPAAEAAK"
     gene            4588..5070
                     /locus_tag="AABD07_001628"
     CDS             4588..5070
                     /locus_tag="AABD07_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFB2356114.1"
                     /translation="MAIAKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSSDDAFGEQDSELVRIEDAGAFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGSHGHYHH
                     "
     gene            5157..5969
                     /gene="hpnC"
                     /locus_tag="AABD07_001629"
     CDS             5157..5969
                     /gene="hpnC"
                     /locus_tag="AABD07_001629"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HFB2356115.1"
                     /translation="MSVGHYENFPVGSLVLPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLSGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGDLTDYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(6042..6512)
                     /locus_tag="AABD07_001630"
     CDS             complement(6042..6512)
                     /locus_tag="AABD07_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HFB2356116.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLGALEQKALRIVEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     PEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            6639..8444
                     /locus_tag="AABD07_001631"
     CDS             6639..8444
                     /locus_tag="AABD07_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HFB2356117.1"
                     /translation="MKKLICLFAVFLMLCGRAFALDANDLLPPEKAFVPELTVADDGV
                     NVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQTVHHHEAQVAFP
                     YAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDEPASAKDRFLQPS
                     SQNGSGALPPPKGDEGGDGRFKLSWDTLNANLLAFFLAGLGLSFTACMYPLLPIVSSI
                     VVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQQAWVVLAASALM
                     VVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSALIVGPCVAPPLA
                     FALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGDWMNAVKYAFGFI
                     LLAVAVYLATPHLPYYLVVALYTLLMLVPAFMLLVNGRRQKRRPKAVAFALGSILLIG
                     GAWFGWQGANGKTTALHHFLTLNPPAEAGKFSEHGKMFADTAALKAAMDTALKEHPDK
                     PVVLDFYADWCISCKEMAVYTLNQPEVHQAVDMERFFQIDVTANTPEHQALLKEYGLF
                     GPPGVFVVRADGSRSEPLLGFVKADKFIEWYEQNR"
BASE COUNT         2205 a         1907 c         2381 g         2308 t
ORIGIN      
        1 aggaaaattt attatgaaac tcgaagcaag caagcagaag tttaaaaaat catttattat
       61 aagtctattt ttttctattc tttaatacct ctccgctttt ggctgttgat tatgtttacg
      121 acaaaaccaa gctcactgat gatgaaatta tccgcttaaa aaaaactccg cgatagaaat
      181 agtgaatatt ggaaagaaga aacttatcac ataaaaagta acgggcgaac ttatccaaac
      241 attcccgcat tattccctaa acatcctttc gatccattcg aaaacatcaa caactcaaaa
      301 aagatttctt tttatgacaa ggaatacact gaagattacc ttgttggctt cgcccgaggt
      361 ttcggggttg aaaaaagaaa tggggaagaa gaaaaaccac tccggcaata ttttaaggac
      421 tgtgtaaata ctgagaattc caataatgat aattgtaaaa tttcatcctt cggaaactat
      481 ggcccaatat taataaagag cgatattttc gccttagcat cacaaataaa aaatagccat
      541 atcaacagcg aaattttatc tgtaggtaat tatatcgaat ggcttcgccc aacacttaat
      601 aagcttactg gttggcaaga gcatctatat gctggtttag atccattcca ctatattgag
      661 gttacagaca actcgcacgt tatcggacaa acgattgatt tgggagcatt agaattaaca
      721 aattctctat gggaaccccg ttggaactct aatattgatt atttaataac aaaaaatgct
      781 gaaattcgtt tcaacactaa aaatgaaagt ttactcgtaa aagaagatta tgctggcgga
      841 gctcgttttc gttttgctta cgatctaaaa gataaagtcc ctgaaatacc agttttaact
      901 tttgaaaaaa atataactgg cacatcagat attatttttg agggaaaagc gttggataat
      961 ttgaaacacc tagacgggca tcaaattgtc aaagtaaatg acaccgcaga taaagatgcc
     1021 tttagacttt ccagtaaata ccgaaaggga atttatacgc tctctttaca acaacgccca
     1081 gagggctttt ttaccaaagt gcaagaacgc gatgatattg cgatttatgc acaacaggct
     1141 caagccgcca ataccttatt cgccttgcgt ttgaacgaca aaaacagtga tattttcgac
     1201 cgcactttac cacgcaaagg cttgtggttg cgtgtgattg acggacattc caaccaatgg
     1261 gtgcaaggca aaacagcacc tgtagaaggc tatcgaaaag gtgtgcaact cggcggcgag
     1321 gtgttcacat ggcaaaacga aagtaatcaa ctttctattg gcttaatggg cggacaagca
     1381 gaacaacgca gcactttccg caatccggat acagacaatc ttacaacggg aaatgtgaaa
     1441 ggctttggtg cgggcgttta cgccacttgg catcagcttc aggacaaaca gacaggtgcg
     1501 tatgttgata gctggatgca atatcaacgt ttccgccacc gcattaacac tgaatatgct
     1561 acagaacgtt ttacttcaaa aggtattact gcctcaattg aagcgggtta caatgcgtta
     1621 ttggcggaac acttcactaa aaagggcaac agccttcgtg tttacctaca accacaggcg
     1681 caattgactt atttgggggt aaacggaaaa ttcagcgata gcgaaaatgc ccaagtgaat
     1741 ttgcttggct cccgccaatt acaaagccga gtgggcgttc aagctaaagc gcaatttgct
     1801 ttcactaatg gcgtcacttt ccaaccattt gttgctgtca attcaatcta ccaacaaaaa
     1861 cctttcggtg tggaaataga cggggatcgt cgagtgataa acaataagac ggtaattgaa
     1921 actcaattag gtgtagcagc gaaaatcaaa tctcacttaa ccttgcaagc ctcattcaac
     1981 cgccaaacaa gcaaacatca tcacgctaaa caaggtgcgt tgaatttaca gtggacgttt
     2041 taagttaaat tgtaacaaaa taaaatcggc agggaaattc actgccgatt ttattttttt
     2101 aaaagtgcgg tcatttttcg tgtaatttcc accaattttt accgcacttt caatttcagc
     2161 ttgaacaagt tcaatagtct gctctgcatt aattacgact gcttttggat tatcttttac
     2221 taattctaaa tagcgtgctc gagtgcgatg gaaaaaatct aaatccattt gctcaatacg
     2281 gtctaactcg ccacgtccac gagctcgcgc taaaccgaca atcggatcta ttgtcctttt
     2341 ctttgttgtg tatgcaaatc agaaatgccg gttacggaag cagtttgcca ggattcataa
     2401 tgttatatgg atcaaggtgt tgtttgatgc ttttcatcag ggcgatttcg gcaggcgtgc
     2461 gtactttgtc cagccactgt tttttgatga tacctatgcc gtgttcggcg gcaatcgtgc
     2521 cgttgcaggc aagaacgttg cgataaaccg cgtcgttgat gtcgttttcg taacgataga
     2581 cttcattgct gaggatttcg ggcaggaaag tattgtagtg caggctgccg tcgccaagat
     2641 gtccgaagca gacgatttgt atgcctttaa aattctgttc caaatctttg gcgcaccggc
     2701 ggacaaagtc ggcaacgcgc ccgataggaa cggcaatatc gtgtttgatg ctggtgccca
     2761 gtttgcgttg ggaggcggag atgttttcgc gcaacgccca catatggata cgttcttgtt
     2821 cgctttgcgc caatacgctg tcggtaaatc cttttttata aagaaattcg acaagccgat
     2881 catcaagatt gctgtcgggt aatgagtcgg tcaactcaag taaaatatgc cattctgaat
     2941 gtgtcggcag ggggagtttg ctgaattcgg aagacaactt ggcggcaaaa cggccgatca
     3001 gttcaaaact gcataagcgt tcggcaaagt gcgcttgggt ttcggtcagc aggcggacgg
     3061 cggattcgat gtcgggaatg ccgacccatg ccgttgcctt gtccgaggga cgggcaaaaa
     3121 gcttgagcgt ggcggcagtg atgatgccca gtgtaccttc gctgccgata aacagatggc
     3181 gcaggtcgta gccggtggtg tttttatgca ggggatggag atgggaaacc agttcgccgt
     3241 tggggaggat gacttccaaa ccgataacca ggtcgcgcat cgtgccgtaa cgcaatacgt
     3301 tcaaacctcc ggcattgcag gcgatgttgc cgccgatttg gcacgagcct tcgctggcga
     3361 gactgagtgg aaacagcctg tttgaggctt cggctgcctg ttggacggtt tggagtacgg
     3421 aacctgcttc gacggttatg cagttgtctg acaaattgat gctgcggatg cggttgagtt
     3481 tggaaaggtt cagcaatacg ccgttttccg atactgccgc gccgcacaaa ccggtattgc
     3541 cgccttgcgg cgtaaccgga atgcggtgtt cgtaacaaaa acgcataatg gtttgcacgc
     3601 tttcaacgct gcgcggctgc aaaatgatgt ctggtgcaga cgtaaagcgg ttgcgctgat
     3661 cttttaaaag cgtcggagaa ggttcggcaa tttcatctgc cggcaggagt cgggaaaatt
     3721 cggtatgaag gtcaggcatg tttgtcggaa gggtagggag aagattgagg aagggaatct
     3781 gatgccgtct gaaaaatcaa aaaagcagga tactgaacgt atcctgcttt tttgcaagcg
     3841 gaaaatgctt attttgcagc ttcggcagca ggagcttcag cggcaggtgc ttcggcggca
     3901 ggtgcttcgg tagcagcagc ttcggcggca ggtgcttcag cagcgggagc ttcagcagcg
     3961 ggagcttcag cagcgggagc ttcggcagcg ggagcttcgg cggcaggtgc ctcggtagag
     4021 gaagcctcag cagcaggagc ttcagcggct ttttctccgc cgcaggcagc caaagccaaa
     4081 gacaacaaag cagcggcaaa cagggatttt ttcattttag taacctttaa aatcaattta
     4141 aattattgaa acaaataggt ctttttcgac catgctacaa accgggttgg aaattcatcg
     4201 ctgaatttgc gtaattatgc accatggaat aagggattgc aatgtcgtac agatgggaaa
     4261 aaggtttgaa tgaaaagttt tctggcgggc ggattgataa atcctgtaaa acggttttgc
     4321 tgttaaaaat ccgataggga taaatattat agagattaat ataattcagt atcttgtatg
     4381 atttattaag gcagattggg gaagtcggca gatgggtcgg aatggttttt gagagtgttg
     4441 taaaaaattt acactgcaat aaaataacaa aaatttacat tgaaatatgt gccgtacagt
     4501 ttatgaacag gttaacggta atcggccggc gcggcggttg tgttagaatg cgcctgtaat
     4561 caatctgctg ttcctgaaag gacaaatatg gctattgcaa aaaattccgt ggtttcgctg
     4621 cattatgaga tgtatgatgc caacaatcag cttttggata aaaccgaaga accgattgcg
     4681 tatctgcacg gcggttacga cggcattttc cctttggtgg aagaggcgtt gcacggtaag
     4741 gatgccggcg atacggtcga tgtggcgctt tcgtccgacg atgcgttcgg cgagcaggat
     4801 tcggagttgg tccgtattga agatgcgggc gcgttccctg ttgaagtcga agtcggcatg
     4861 atgtttgaag ccgacgatcc tgaaaccggc gatgttgtcg tctatcgtgt aaccgatgtt
     4921 gccgacggca aggcggtggt ggacggcaac catcctttgg caggcatgaa aatccgcttt
     4981 aaagctacgg ttgaaagcgt gcgcgatgca tccgatgagg aaatcgcaca cggtcatgtc
     5041 cacggttcgc acggtcatta ccaccactga ttgccggcag cttggaggta tctgatgccg
     5101 tctgaaaagg gtttgttccg tttcagacgg cattttgttt gatggatgga gaaggtatgt
     5161 cggttgggca ttatgagaat tttcccgtcg gttcgctggt tttgccgcgc aggttgagga
     5221 agccggttca tgcggtgtat gcgtttgcac ggacggcgga cgatatggcg gacgagggca
     5281 gtatgccgtc tgaagccagg ttgtcggggt tggagggttt gcggcgcgag ttggacgtgt
     5341 tggcatcggg cggccggtcg gcgcatcctt tgattgcacg attggatgcc gaggcggttg
     5401 tgccgttcgg tttggatttg cagccgtttt atgatctgct ctcggcgttt tcgcaggatg
     5461 tggttaaaac gcggtacgcg catttcggcg atctgaccga ttattgccgg cgttccgcca
     5521 accctgtcgg acgcattatg ctggctttat acgggaaaac ggatgcggtg tgcgtagcgc
     5581 aaagcgacgg tatttgtacg gctttgcaac tggtgaattt ttggcaggat gtagctgtgg
     5641 attggcaaaa gggcagggtt tatatcccgc aggacgattt gttgaaattc ggtgtttctg
     5701 aggaacagat cgcagcagga cgggcggatg cggcgtttca gcggctgatg gcgtatgagt
     5761 gccggcgtgc attccgtatg ctgaaggcgg gttcgccttt ggcgcgcgaa ttgaaagggc
     5821 gtatcggttt ggaactccgt atgattgtgt tgggggcgca gttgattttg cagaaactgg
     5881 acgcgtgccg atacgatgtg tttgcacaac gccccgtttt ggataagaag gattggttga
     5941 ttatgttgaa acgcgcgttg tggaaatgat tgggggaaaa tgaatgccgt ctgaaagggg
     6001 ttgttccgct tcagacggca ttttgcaggc ggtcggtatg gtcaggcgat ttcatgcggg
     6061 tttaacctgg cttgatcctc tgcacccaag ccgatgagtt tgcgcagtcg ggtcatgtag
     6121 aaattgacat ccaaaccggt gccgtagcgt tgcgccgtcc acagtgtttc cgccagtgcc
     6181 tccatcattt cgtgttcggc ttccggccag ccgcgtttgg cgcacagggt gtcgtggatg
     6241 gcgcgtatgc cgtgcggctg gtctatgccc gcctgttctt ggacggacaa atgcagcgac
     6301 atatgcagga aggggttgct ttcgccgttt tcgggcagcc agtcggtgtc cagatggtct
     6361 tcgatgcgtt cgagataacg gtggtattcg ggatgggctt cgacaatgcg gagggctttc
     6421 tgttccaacg cgcccaattg cagcggattg agccgctgct gccacacgcg ggcgaaaaag
     6481 cggcggacat cgtgggtatt gacatcgtac atggcgggtc cgataagatg tttatggaaa
     6541 taggttcgga taatggcggg ttttacataa attaaatcct accgtcaacc ttaccattta
     6601 taatgcggac aaattatttg tctgaaacgg attcgattat gaaaaaactg atttgcctgt
     6661 tcgccgtatt tttgatgttg tgcggacggg ctttcgcgct ggatgcgaac gatctgctgc
     6721 cgccggaaaa ggcattcgtg ccggagctta ctgttgccga cgacggcgtg aacgtccgtt
     6781 tcaggattgc cgacggatac tatatgtatc aggcgaaaat cgtcggcaag accgatccgg
     6841 cggatttgtt gggacagcct tctttcagta agggcgaaga gaaggaagac gagtttttcg
     6901 gcaggcagac ggttcaccat cacgaggcgc aggttgcctt tccttatgca aaggctgtcg
     6961 gcgaaccgta taaattggtt ttgacctatc agggctgtgc cgaagccggc gtgtgctatc
     7021 cgcccgtgga taccgagttt gatatttccg gcaacggcac ttaccatccg caaaccgacg
     7081 aaccggcatc cgccaaagac cgttttttgc agccttcctc tcaaaacggc agcggggcgt
     7141 tgccgccccc gaagggggac gagggcggcg acggccgttt caagctgtct tgggatacgc
     7201 tcaacgccaa tcttttggcg ttttttctcg ccggtttggg cctgagtttt accgcttgta
     7261 tgtatcccct gctgccgatt gtgtccagta tcgtggtcgg tgacaaaaag gcgggcaagg
     7321 cgcgggcgtt tgtgctgtcc gtcgtttatg ttcagggttt ggctctgact tatacgctgg
     7381 tcggcattgt tgccggactg acgggcgcgc tgctgaccgt atggttgcag caggcttggg
     7441 tcgtgttggc ggcatcggct ttgatggtcg tcttggcgct gtctatgttc gggctgttca
     7501 acatccagct tcccaacgcc gtacagtcat atttccaaaa ccagagcagc aggctctccg
     7561 gcggtaaaat cgtttccgtc tttattatgg gcattctgtc cgcactgatt gtcggaccgt
     7621 gcgtcgcccc gccgctggcg tttgccttgg gctatatcgg tcagacgggc gatgcggttt
     7681 tgggcggttt ggcactttac actttggcgt tgggcaccgg cgtgccgctg attgccatcg
     7741 gcacgttcgg aggacatatc ctgcctaagg cgggcgattg gatgaatgcc gtcaaatacg
     7801 ctttcggctt tatcctgctt gccgtcgccg tttacctcgc cacgccgcat ttgccctatt
     7861 atctcgtcgt cgcgctgtac acgctgctga tgctggttcc tgcctttatg ctgctggtca
     7921 acggacgcag gcagaaacgc cgtccgaaag ctgtggcatt cgcattgggc agcatattgc
     7981 tgataggcgg cgcgtggttc ggctggcagg gcgcaaacgg caaaacgacc gcgctgcacc
     8041 atttcttgac cctcaatccg ccggccgaag caggcaaatt ttcggaacac ggcaaaatgt
     8101 ttgccgatac tgccgcgctg aaggcagcga tggatacggc gttgaaagaa catcccgaca
     8161 aacctgtcgt tttggatttt tatgccgact ggtgcatttc ctgcaaagaa atggcggttt
     8221 acacgctcaa tcagccggaa gtgcatcagg cagtcgatat ggaacgcttt ttccagatcg
     8281 acgtaaccgc caacacgccc gaacatcagg cgttgttgaa agaatacggt ctgttcgggc
     8341 cgccgggcgt gtttgtcgtc cgcgccgacg gcagccgcag cgagccgctg ctgggttttg
     8401 tcaaagcaga caagtttatc gagtggtatg aacaaaaccg ctgattccga tgtttcaaat
     8461 gccgtctgaa gttctcagac ggcatttttg tcagacagga aaacggcaat atccgctata
     8521 cacacggaag cagtccaaag atgtgaaaac cgtgtgtata agtcggtttg cgtattgaaa
     8581 ttaaaagata aaaatacgat gattaaaaaa taggcataag aaaagataaa cacagccggt
     8641 gtttgccggt gtgtgtatct tttgtggaaa aacatcttaa tgccatgtat tttatggaaa
     8701 ataataacat gattaaaaaa tagtcaatca ttaaggttca ggtaggcggc tgcaaccgtc
     8761 aatgtctgaa aagaggtagt gctgtttaag catggaaagc c
//
LOCUS       DAWXHA010000089         8483 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.089, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000089 DAWXHA010000000
VERSION     DAWXHA010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8483
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.089"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            319..1776
                     /locus_tag="AABD07_001632"
     CDS             319..1776
                     /locus_tag="AABD07_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFB2356118.1"
                     /translation="MSRHPARTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISSGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
     gene            complement(2106..2465)
                     /gene="rnpB"
                     /locus_tag="AABD07_001633"
     ncRNA           complement(2106..2465)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="AABD07_001633"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(2544..3647)
                     /gene="prfB"
                     /locus_tag="AABD07_001634"
     CDS             complement(2544..3647)
                     /gene="prfB"
                     /locus_tag="AABD07_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HFB2356119.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVK
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(3750..4652)
                     /locus_tag="AABD07_001635"
     CDS             complement(3750..4652)
                     /locus_tag="AABD07_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HFB2356120.1"
                     /translation="MENMVTFSKIRSFLAIAAAALLAACGTAGNNAARKPVQTAKPAA
                     VVALALGGGASKGFAHIGIVKVLKENGIPVKVVTGTSAGSIVGSLLASGMSPDRLELE
                     AEILGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAV
                     AFNQGNAGQAVRASAAIPNVFQPVIIGRHKYVDGGLSQPVPVSAARRQGANFVIAVDI
                     SARPSKNVGQGFFSYLDQTLNVMSVSVLQNELGQADVVIKPQVLDLGAVGGFDQKKRA
                     IRLGEEAARAALPEIKRKLAAYRY"
     gene            4991..5440
                     /locus_tag="AABD07_001636"
     CDS             4991..5440
                     /locus_tag="AABD07_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFB2356121.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNFAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPRCRLKQD"
     gene            5514..5822
                     /locus_tag="AABD07_001637"
     CDS             5514..5822
                     /locus_tag="AABD07_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356122.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAADKPASNATGVQKSAQGSCGA
                     SKSAEGSCGAAASKAGEGKCGEGKCGATVKKAHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            5940..6782
                     /locus_tag="AABD07_001638"
     CDS             5940..6782
                     /locus_tag="AABD07_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HFB2356123.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGRAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMCRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLENVDAGRVCYIHIAGHDAETPELLIDT
                     HGAAVLPTVWDLLELTYTKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            6772..7518
                     /locus_tag="AABD07_001639"
     CDS             6772..7518
                     /locus_tag="AABD07_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HFB2356124.1"
                     /translation="MQPETSAQYQHRFSQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSKEWSRLKEGFVRDARAQTPYFQEIPGEFLQYCQSPPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTHDLQEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPKADNWKNILLGKWSG
                     WIEQRIIIPSLSAISENMEGNSPSQNHLSA"
     gene            7540..8127
                     /locus_tag="AABD07_001640"
     CDS             7540..8127
                     /locus_tag="AABD07_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HFB2356125.1"
                     /translation="MPLPDLTDAELMESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTALDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSNEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            8100..8312
                     /locus_tag="AABD07_001641"
     CDS             8100..8312
                     /locus_tag="AABD07_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HFB2356126.1"
                     /translation="MVQPRKPEVNVMKKCRDIALLLSKHQDRETTPGEKISIYMHLLF
                     CPHCREYKRQLQTIKISLAKTTRTSK"
BASE COUNT         2040 a         2353 c         1981 g         2109 t
ORIGIN      
        1 aagttaatcc accataatgc gcccttcggc gtggcggata tataaggaag tgattttcca
       61 tctaagtaaa aaccgcccta tcggataagc cattgacaga aaaggattta cccgcgccgt
      121 atcggaacac gtcctctaaa atacaatcca ttgaattgaa acaaatataa aaacatccgc
      181 ccgcgaaaaa cggcagcgcg tcgtttgaca aagaatgaaa atatcggtta aaaaccgata
      241 ttttcataca aaaaaacacc gccgccgtcc gcatccgttt cagacggtat tgagagaaaa
      301 tcttttagga gaacctttat gtcccggcat cccgcccgca ccggagaaaa aacatttttc
      361 ggccacccct tccagctttc caccctcttc catatcgaat tgtgggaacg tttttcattt
      421 tacggaatgc agggcatcct gctgatttac ctctactaca ccgccgacaa aggcggcttg
      481 ggcatagaca aaaccctcgc aggcggcatt gtcggcgcat acagcggcag cgtgtacctg
      541 tccaccattt tgggcgcgtg gtttgccgac cgcgtatggg gtgcggaaaa aaccctcttc
      601 ctctcgggca tcgtcgtaat gctcgggcac atcgtccttg ccgccgcacc gggcctgtac
      661 ggccttctaa tcgggctgat attcatcgca ttgggcagcg gcggcgtgaa atctacggcc
      721 agttctatgg tgggcgcatt atacgaacag gacgaaatgc gcccgctgcg cgatgcggga
      781 ttttccattt tctacatcgc catcaatatc ggcggcttct taggcccctt attgaccgga
      841 ctgcttcaag aaaacatcgg tttccattat ggtttcggcg cggcggcggt cggtatggca
      901 ttcggcttgt ggcgttattc cttgggacgt aaaaacctgc cccaccccac cgtcccccat
      961 ccgctttcaa aaggacaggg caaaactgcg gccgccgtcg gcatcaccct catcgccgca
     1021 cttgcaaccg ccatcaaaac cgggcttgtc aacctcgaca atttctccgg catcctctta
     1081 tctaccgtca tccttgccgt catcgcctat ttcgcccgcc tgctgaccaa cccccgcgtc
     1141 agttccgaca acaaacggca catcatcgcc tacatcccgc ttttcctgac catctgtatg
     1201 ttttgggccg tctggtttca gatttacacc gtggcaaccg tctatttcga cgaaaccgtc
     1261 aaccgcacca tcggttcgtt taccgtaccc gtcgcctgga aagattctat gcaaagcctg
     1321 tgggtcatcc tgttttccgg actcatggcg gcaatgtgga caaaaatggg gcgcaaacaa
     1381 cccaaaaccc cgctgaaatt cgctatggcg gtatttgtta ccggcgcgtc gtttttggga
     1441 ttcgttccct ttatttcctc cggaacgccg atgcctattg cggttttcgc actgatcgtc
     1501 ctcgccatca cgataggcga actgatgatt tccccgattg cgctgtccat ctccaccaaa
     1561 atcgcaccgc ctttattcaa aacccaaatg gtcgccctta atttccttgc cttttcatta
     1621 ggcttcactt tgggcggcgt attgtttgaa aaaggctatc aggcgggcga cgaaatcggc
     1681 ttctaccggc tgctgttcta catcggcgca gccacaggct tcctgctgct cctgctcgtc
     1741 cccaaattga acaaaatgct cgaaggcaca gactaagtcc tgccccgatg cgccgatacc
     1801 gtctgaaccc ttcagacggc atttttccgc ataatgaaac caaaccgttt ccacccgaca
     1861 ggacaggctt tcccccccca accggaaggc agcctgccga ttgtcattta aatacccgcc
     1921 tgattccgtc tgtttgcaag ggaaatagcc gtttatttcc gcttgggcgg aaaccggtcc
     1981 tattgagtaa aaggcatttt gtccgactca tcagggctgc atcaacggaa tataaaaaca
     2041 cagcctaaat aaaaatgccg tccgaaccgt atttcaggtt tcagacggca tttgcgtgtc
     2101 ggatgcacac cggacaggcg gtaagccggg ttctgtctcg gacagtcatt cctctaggca
     2161 taccgttgcc ggtatgctca agcaacctac ccgaacgctc ggcgggcagc gtcattgcgt
     2221 tctgtttggt cttgctccga atggggtttg gcctgccgca tattgttacc aaatgcgcgg
     2281 tgcgccctta ccgcaccttt tcacccttgc ctgtgctgcc aaagcagcca tcggcggttt
     2341 tgctttctgt tccactttcc gtcgcgttac cgcgcccggc cgttaaccgg cattctaccc
     2401 tgcggagccc ggactttcct ccccgtatgc cttacgcgat acgcggcgac tgtctgcccg
     2461 tcccgtgtgc ggcgcggatt ataacacgaa acgcaaaaat gccgtctgaa acggtacagg
     2521 tttcagacgg catacagcct aaactacaca ccctgtttca ggctggcttc gataaagccg
     2581 tccaagtcgc cgtccaatac ggctttggtg ttgccgactt cgtagcctgt acgcaagtct
     2641 ttgatacgtg aggaatccaa aacatacgaa cggatttggc tgccccaacc cacatccgac
     2701 ttgccttctt ccaatgcctg tttctcttcg ttgcgtttgc gcatttccaa ttcatacagt
     2761 ttggatttca acatttccat cgcggccgct ttgttggcgt gttgcgaacg gtcgttttga
     2821 cattgcacca caatccccgt cggctcgtgg gtaatacgca cggcggagtc ggttttgttg
     2881 atgtgctgac cgcccgcacc cgatgcgcga taggtgtcga tgcgcaaatc ggcggggttg
     2941 atttcgattt cgatggaatc gtcgatttca gggtaaacga acacggaggc aaacgaggta
     3001 tggcgtttgt tgttcgaatc aaacggcgag tagcgaacca agcggtgaac gccggtttcg
     3061 gtacgcagca aaccataagc gtattcgcct tccactcgga tggtggcgcg gttgatgcct
     3121 gcgatttcgc cgtcgtcttc ctcaaggatt tcgattttga agcctttgcg ctcggcatag
     3181 cggctgtaca tacggaacaa catccccgcc cagtcttccg cttcggtacc gcccgcgccg
     3241 gcggtgatgt cgataaagca gttgttcggg tcggcgggct ggttgaacat ccgtttgaac
     3301 tccaaatccg ccatctgttt ttccagcccc gccacgtctt ccttcacggc ggcaaaacct
     3361 tcttcgtcgt tttcttcgac ggccatttca atcagcatac ggttgtcttc gatacccgaa
     3421 gcgatgttgt cgagcgtcag cacgatgcct tcaaggattt tgctctcttt gccgatttct
     3481 tgggcacgtt tcgggtcgtt ccaaagctcg gggtcttcgg aaagcccgat gacttcttcc
     3541 aatcggtctt tcttgccctg ataatccata taaacgcgga tgtcttcgct acgcttctcc
     3601 aaatcattca gggtgttgtt gagctggttg attacttcgg cttccatgat tctttcgttc
     3661 tttcaaaatt ttaggggcgt attgtacggg attcgggtat ttttttctat ggatgaagcc
     3721 ttctggaaat acgttcggac ggcatagcgt caataacggt atgccgccag tttgcgtttg
     3781 atttcaggca atgcggcacg tgctgcctcc tcgcccaacc ggatggcgcg ctttttctga
     3841 tcaaatccgc cgactgcacc caaatccaaa acctgcggtt tgataaccac atccgcctgc
     3901 cccaactcgt tttgcaacac ggaaacgctc atcacgttca gcgtctgatc gagataagag
     3961 aagaaacctt gaccgacatt tttgctcgga cgtgcggaaa tatcgacggc aatcacgaaa
     4021 ttcgccccct gccgccgagc ggcactgacg ggcacgggct gcgacagacc gccgtcaaca
     4081 tatttgtgcc tgccgatgat gactggctgg aacacattgg gaatggcggc ggaagcacga
     4141 accgcctgcc cggcattccc ttgattgaaa gcgacggcct tgccggtttc aaaatcagtg
     4201 gcaacggcgg caaatttgat gggaaactgc tgaatctgcc tgccgccgac ttttcggttg
     4261 atgtaatttt gcagcttttc gcctttgata aaaccactgg tggacaaggt taaatcgact
     4321 aaatcggttt tacctaaaat ctcggcttcc aattcgaggc ggtcgggcga catacccgat
     4381 gccaaaaggc tgccgactat cgaacctgcc gatgtgccgg taaccacctt cacaggaata
     4441 ccgttttctt tcaaaacctt aacaattcct atatgggcaa atcctttaga tgcgccgcca
     4501 ccgagtgcca aagcgaccac tgcggcgggt ttggcggttt gcaccggctt gcgggcggca
     4561 ttgtttcccg ccgtaccgca ggcggcaagc aacgcggcgg cggcgattgc caaaaatgat
     4621 ctgatttttg aaaacgttac catattttcc attcctttat atattgctcc ccgtcaaaaa
     4681 aaaagggggg gattgctttt cttaaccccc cctttgacag ccaagctaaa gggggctttt
     4741 tatatcatca tcaaaattaa tattttcttt ttttccttta cggaaattgt atttgaaggc
     4801 ataccgtcca aggcgggaat tatctcacaa caccgccgtt atccaaatat cccgcctttt
     4861 tccctttctt tccgtcaaaa tactttcttt ttatattcat taacttgtta aattattagc
     4921 tgacgggtgt cagtttttcc gacaaaatcc gtctaacggg gtatcaacag gaacaaaaac
     4981 aggaacactt atgaaaatcg gaacaacttg gcagacggca tccgctatgc tggttttgcg
     5041 tctgtttgcc gcatatgaat ttttggaatc gggtttgcaa aaatggaacg gggagaattg
     5101 gttttccgaa atcaacgatc agtttccatt cccgttcaac ttgctgccgg acgcgttaaa
     5161 ctggaatttc gccatgtatg cggagctttt gctgcccgta ctgttgcttt tgggtttggc
     5221 aacgcgcctg tcggcattgg ggctgatggt cgttaccgcc gtcgcttggg ctgcggttca
     5281 cgccggttcg ggttacaatg tctgcgacaa cggttataaa atggctttaa tttatatcgt
     5341 ggtattaatc ccgctgcttt tccagggtgc gggcggatgg tcgctggata cgctgctgaa
     5401 aaaacggttt tgcccccgat gccgtctgaa acaagattga ttcagtcgtg gaatccgact
     5461 ttaaacattc caaccttatc tcgttaactt gatattctga aaaggaaata gaaatgaaca
     5521 aaaacattgc tgccgcactc gccggtgctt tatccctgtc tttggccgcc ggcgccgttg
     5581 ccgccgacaa accggcaagc aacgcaacag gcgttcaaaa atccgcccaa ggctcttgcg
     5641 gcgcatccaa atctgccgaa ggttcgtgcg gcgcggctgc ttctaaagca ggcgaaggca
     5701 aatgcggcga gggcaaatgc ggtgcaactg taaaaaaagc ccacaaacac accaaagcat
     5761 ctaaagccaa agccaaatct gccgaaggca aatgcggcga aggcaaatgc ggttctaaat
     5821 aatcccgccc cttcaaacca agccgcgttt ttcagtaaaa tgcggctttt ttaacggcaa
     5881 acaaagattt tttttaacaa gcacatcatt cttttgtgcc atccgaaccg ggtaaaaata
     5941 tgattcaaca cgcaggcttg ggctaccgcc gcgatttggc ggaagacttt ctctcgcttt
     6001 ccgaaaacag cccgatatgc tttatcgaag ccgcaccgga aaactggctg aaaatgggcg
     6061 gcagggcgcg caaacagttt gaccgtgtgg cggaacggct gccgctggcg ttgcacggat
     6121 tatctatgtc gctgggcgga caagccccgc tggataccga tttgatagac ggcatcaaag
     6181 aaatgatgtg ccgttatgac tgcacgtttt tctccgatca tttgagctac tgccacgacg
     6241 gcggtcatct ttacgatttg ttgccgctgc ctttcactga agaaatggtg catcatacgg
     6301 cgcggcgtat ccgcgaagta caagaccgtt tgggctgccg catcgccgtg gaaaacacgt
     6361 cctactacct gcattctccg cttgccgaga tgaacgaggt cgagttcctc aacgcggttg
     6421 cccgtgaagc cgactgcggt attcatttgg atgtgaacaa tatttacgtc aacgccgtca
     6481 atcacggcct gctgtcgcct gaggcctttt tagagaatgt ggacgcaggg cgcgtgtgct
     6541 acatccacat cgccggacac gatgccgaaa cccccgagct tttgattgat acccacggcg
     6601 cggcggtttt accgaccgtt tgggacttgc tcgaactcac ctacaccaag cttcccacca
     6661 tccctcccac cctgttggaa cgcgatttca atttcccacc ttttgccgaa ctcgaagccg
     6721 aagttgccaa aattgccgat tatcaaacgc gtgccggaaa ggaataccgc cgtgcagcct
     6781 gaaacctccg cccaatacca gcaccgtttc tcccaagcca tacgcggggg cgaagccgca
     6841 gacggtctgc cgcaagaccg attgaacgtc tatatccgcc tgatacgcaa caatatccac
     6901 agctttatcg accgctgcta taccgaaacg cggcaatact ttgacagcaa agaatggagc
     6961 cgtctgaaag aaggtttcgt ccgcgacgcg cgtgcccaaa cgccctattt tcaagaaatc
     7021 cccggcgagt tcctacaata ttgccaaagc ccgccgcttt cagacggcat tttggcgctg
     7081 atggattttg aatataccca attgctggca gaagttgcac aaattccgga tattcccgac
     7141 attcattatt caaatgacag caaatacacg ccctcccctg cggcctttat ccggcaatat
     7201 cgatacgatg ttacccatga tttgcaggaa gcggaaacag ccttgttaat atggcgaaac
     7261 gccgaagatg atgtgatgta ccaaacattg gacggcttcg atatgatgct gctggagata
     7321 atgggttcct ccgcgctttc gtttgacacc ctcgcccaaa cccttgtcga atttatgcct
     7381 aaagccgata attggaaaaa tattttgctt gggaaatggt caggctggat tgaacaaagg
     7441 attatcatcc cctccttgtc cgccatatcc gaaaatatgg aaggcaattc cccgagccaa
     7501 aaccatctat ccgcataaaa ttaccttgtt cccgatacta tgccgctacc cgacctgacc
     7561 gatgccgaat taatggagtc gcgcaaactg cttctgcatt ttgcgcggct ccagttgccc
     7621 gaccaccctg atttggctga agatttagtg caggaaacat tgctgtccgc atacagcgca
     7681 ggcgacagtt ttcaaggcag ggcacttgtc aacagctggc tttttgccat attgaaaaac
     7741 aaaattattg acgcattacg tcaaatcggg aggcagagga aagtctttac cgcactggat
     7801 gacgagctgc tggatgaagc atttgaaagc catttttccc aaaacgggca ttggacgccg
     7861 gaagggcagc cgcaacattg gaacactccg gaaaaatcat taaataacaa cgaattccaa
     7921 aaaattctgc aaagctgcct atacaacctg cctgaaaaca ccgcacgggt attcaccctg
     7981 aaggaaatac tcggtttttc atccaacgaa atacaacaaa tgtgcggtat cagcacgtcc
     8041 aactaccaca ccattatgca ccgcgcccga gaatcattgc gccaatgcct gcaaatcaaa
     8101 tggttcaacc aagaaaaccc gaagtaaacg ttatgaaaaa atgccgcgat attgccctgc
     8161 ttctttccaa acatcaggac cgggaaacca ccccgggcga gaagatttcc atatatatgc
     8221 acctgctgtt ctgcccgcat tgccgggaat ataaaagaca gcttcaaacc atcaaaatat
     8281 cactggcaaa aacaaccaga acttcaaaat aaatgccgtc tgaaagggct tcagacggca
     8341 taagctgacg gaaacaaatc aaaccgattt actgttatcg gcagttcatc cataatacac
     8401 tcttcaaaag cagcatattc ctccatacgg aatatataaa tacgtaaaac acgaaggctg
     8461 catcaatttc ccatatttgc ctc
//
LOCUS       DAWXHA010000090         8433 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.090, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000090 DAWXHA010000000
VERSION     DAWXHA010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8433
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.090"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            86..3301
                     /gene="carB"
                     /locus_tag="AABD07_001642"
     CDS             86..3301
                     /gene="carB"
                     /locus_tag="AABD07_001642"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HFB2356127.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKADNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGRTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSEDKAEIRRELANPGPERMLFVADAFRAGFTPEEIHEI
                     CAIDPWFLAQIEDLMKEEKSVSDGQLQDLDYAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILSPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQAINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDYLGVYSVQELHGRLKNRN"
     gene            complement(3502..4572)
                     /gene="queA"
                     /locus_tag="AABD07_001643"
     CDS             complement(3502..4572)
                     /gene="queA"
                     /locus_tag="AABD07_001643"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HFB2356128.1"
                     /translation="MAACPNESVKMDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD
                     MPLQDRVFGDLPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALA
                     HIRSSKSPKPGMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYI
                     ERAADADDDSRYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGT
                     FQPVRVDKIEEHKMHSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATG
                     YLKDGQGDTDIFITPGYRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIE
                     REYRFFSYGDAMVLGRNEGGGL"
     gene            4659..4916
                     /locus_tag="AABD07_001644"
     CDS             4659..4916
                     /locus_tag="AABD07_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HFB2356129.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQFRENEHNFTVVSHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            4898..5359
                     /locus_tag="AABD07_001645"
     CDS             4898..5359
                     /locus_tag="AABD07_001645"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HFB2356130.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAAAPVY
                     AAPVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAAFVEV
                     GQQVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            5471..6832
                     /gene="accC"
                     /locus_tag="AABD07_001646"
     CDS             5471..6832
                     /gene="accC"
                     /locus_tag="AABD07_001646"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HFB2356131.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKGSLHVKL
                     ADESVCIGPAASAQSYLNIPAIIAAAEVTCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDDAEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVLADE
                     HGNAVYLAERDCSLQRRHQKVIEEAPAPFIDEEARKKIGKACTDACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIASGLPLQYKQKDIKIEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQEGGVSIHYLEHWLEARKTK
                     QDK"
     gene            6936..7823
                     /gene="prmA"
                     /locus_tag="AABD07_001647"
     CDS             6936..7823
                     /gene="prmA"
                     /locus_tag="AABD07_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HFB2356132.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDACAGTQNEQA
                     IFGEPGMPTEQIWQQSKVIALFGEHDEAAAVIDAAAQECGLKDLAYTGETIEDQDWVR
                     LTQSQFDPIRISDRLWITPSWHEAPEGCAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLP
                     DSLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETDEGWARLNGVKR"
     gene            7841..8404
                     /gene="orn"
                     /locus_tag="AABD07_001648"
     CDS             7841..8404
                     /gene="orn"
                     /locus_tag="AABD07_001648"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HFB2356133.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAIHQSDDLLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWIPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPIAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPKAEAQ"
BASE COUNT         2040 a         2566 c         2216 g         1611 t
ORIGIN      
        1 tttagcttca attttagaaa agggaaatac ttttcttaaa agctatgtaa caaaacaacc
       61 ttctttaatt caagagtaac cacccatgcc caaacgtacc gacctaaaat ccatccttat
      121 catcggcgcc ggccctatcg ttatcggtca ggcctgcgaa tttgactatt cgggcgcaca
      181 ggcctgcaag gctttgcgtg aagaaggcta taaagtcatt ctggtgaatt ccaaccccgc
      241 cacgatcatg accgaccctg aaatggcgga tgttacctac atcgaaccga ttatgtggca
      301 gacggtggag aagattatcg ccaaggagcg gcccgatgcg attctgccca cgatgggcgg
      361 tcagaccgcg ctgaactgtg cgctggattt ggcgcgtaac ggcgtgctgg cgaaatacaa
      421 tgtcgagtta atcggcgcaa cggaagacgc gatcgacaag gcggaagacc gcggccgctt
      481 taaagaagcg atggaaaaaa tcggcctctc ttgcccgaaa tcttttgtct gccacaccat
      541 gaacgaagcc ttggcggcgc aagaacaggt cggctttccg acgctgattc gtccgtcttt
      601 cacgatgggc ggttcgggcg gcggcattgc ctacaataag gatgagtttt tggcgatttg
      661 cgaacgcggt ttcgatgcgt cgcctacgca tgagctgctg attgagcagt ctgtgctcgg
      721 ctggaaagag tacgagatgg aagtggtgcg cgataaggcg gacaactgca tcatcatctg
      781 ttcgattgaa aacttcgacc cgatgggcgt tcatacgggc gactcgatta cggttgcgcc
      841 ggcgcaaacg ctgacggaca aggaatacca aatcatgcgc aacgcttcgt tggcggtatt
      901 gcgcgaaatc ggcgtggaca cgggcggctc gaacgtgcag tttgcggtga accctgaaaa
      961 cggcgagatg attgtgatcg agatgaaccc gcgcgtgagc cgttcgtccg cgctggcttc
     1021 caaagcaacg ggcttcccga ttgcgaaggt ggcggcgaag ctggcggtcg gctttacgct
     1081 ggacgagttg cgcaacgaca tcaccggcgg ccgcacgccc gcgtcgttcg agccttccat
     1141 cgactatgtg gtaaccaaaa tcccgcgttt cgcgtttgaa aaattccccg ccgcagacga
     1201 ccgcctgacc acgcagatga aatctgtggg cgaagtaatg gcgatgggcc gtaccattca
     1261 ggaaagcttc caaaaagcct tgcgcggttt ggaaaccggc ttgtgcggtt tcaatccgcg
     1321 cagcgaagac aaagcggaaa tccgccgcga actggccaac cccggccccg aacgtatgct
     1381 gtttgtggca gacgcgttcc gcgcgggctt cacgccggaa gaaatccacg agatctgcgc
     1441 catcgaccct tggttcttgg cgcaaatcga agacttgatg aaggaagaaa aatcggtttc
     1501 agacggccag ttgcaagatt tggattacgc cgccctacgc cgtctgaaac gcaaaggctt
     1561 ctccgacaaa cgtttggcac aattgttgaa cgtaagcgaa aaagaagttc gcgaacaccg
     1621 ctacgcgctg aagctgcatc cggtttacaa acgcgtcgat acctgcgccg ccgagttcgc
     1681 caccgaaacc gcctatcttt actccactta cgaagaagaa tgcgaatccc gtccttccga
     1741 ccgtaaaaaa gtgatgattc tcggcggcgg cccgaaccgc atcggtcagg gcatcgagtt
     1801 tgactactgc tgcgttcacg ccgcactcgc cctgcgcgaa tcgggctttg aaacgattat
     1861 ggtcaactgc aaccccgaaa ccgtgtccac cgacttcgac accagcgacc gcctctattt
     1921 cgagccgctg acattggaag acgtgttgga aatcgtccgc accgaaaacc cgtggggcgt
     1981 gattgttcat tacggcggtc aaaccccgct gaaactcgcc aacgcattgg ttgaaaacgg
     2041 cgtgaacatc atcggcacat ccgccgacag catcgatgcc gccgaagacc gcgaacgctt
     2101 ccaaaaagtg ttgaacgact taggcctgcg ccaaccgccc aaccgcatcg cccacaacga
     2161 agaagaagca ctcgtcaaag ccgaagaaat cggttatccg ctggtcgtgc gcccgtctta
     2221 tgttttgggc ggacgcgcga tgcagattgt ccactccgcc gaagccttgc aaaaatacat
     2281 gcgcgaagcc gtgcaggttt ccgaagacag ccccgtgctg ctcgatttct tcctcaacaa
     2341 cgcgattgaa gtcgatgtgg actgcgtttc agacggcaaa gatgtggtta tcggcggcat
     2401 catgcagcac gtcgaacagg cgggcatcca ctccggcgac tccggctgct cgctgccgcc
     2461 ctactcctta agcgaagaaa tccaagacga aatccgccgc caaaccaaag cgatggcgta
     2521 cgcgctgggc gtggtcggac tgatgaacgt gcagtttgcc gtgcaggacg gcgtggtgtt
     2581 cgtgttggaa gtcaacccgc gcgccagccg taccgtcccc tttgtctcca aagccaccgg
     2641 cgtgccgctc gccaaagtcg gcgcgcgctg catggcaggc atttccctga aagaacaagg
     2701 cgtggaaaaa gaagtcgtcc ccgatttcta tgccgttaaa gaagccgtgt tcccattcat
     2761 caaattcccg ggcgtggata cgattttgag tccggaaatg cgctccaccg gcgaagtgat
     2821 gggcgtgggc gcaagtttcg gcgaagccta ctacaaagcc caactcggcg cgggcgaacg
     2881 cctcaacccg accggcaaaa tcttcctctc cgtgcgcgaa gaagacaaag aacgcgtcat
     2941 taaaaccgcc aaaaacttcc aagccttagg ctacggcatc tgcgccacgc gcggcacggc
     3001 gcaatacctg accgaacacg ggctgattgt gcaggccatc aacaaagtcc ccgaaggccg
     3061 cccgcacatc ggcgacgcgc tgaaaaacgg cgaaatcgca ctggtcgtaa ataccgtttc
     3121 cagcgatccg caatccgtgt ccgacagcca catcatccgc caaagcgcat tgcagcaacg
     3181 cgtgccgcaa tacaccacca ccgccggcgg cgaagcgatg agcgaaggcg cgaaaagccg
     3241 ggattatctg ggtgtgtaca gcgttcaaga gctgcacggt cgtttgaaaa accgcaactg
     3301 atgcctgaat caggttgaac aatgccgtct gaagccgttt tgcggtttca gacggcattt
     3361 tgttgcacat agccttcact ttcttttgac ctttaagcac cctaatttgg ggcggtggat
     3421 tatccaactg ccggacatcc ataaaaatac cgcccgaacc acggttcaga cggcatctgc
     3481 cttgcaacgg acagcagcag tttaaagccc gcccccttcg ttccgcccca aaaccatcgc
     3541 atctccgtag ctgaagaaac ggtattcacg ttcaatcgca tgacggtaca cggcgcggat
     3601 atgacccata cccgaaaacg cgccgaccaa catcagcagc gtcgatttcg gcagatgaaa
     3661 attggtaacc agcctgtcga caacattaaa acggtagccc ggcgtgatga aaatatcggt
     3721 gtcgccctgt ccgtctttca aatatcccgt tgcgcgcgcg gcagactcga gggcgcgcat
     3781 ggaagtcgtg ccgaccgccc aggctttgtt cccccgggct tttgccgcct caacggcagc
     3841 gacggtttca gacggcactt caaaccattc gctgtgcatt ttgtgttctt cgattttatc
     3901 gacgcgcacg ggttggaatg tccccgcacc gacgtgcagg gttacttctg cggttaccgc
     3961 gcctttgtct ttcagacggc gcaaaagttc ttccgtaaaa tgcaggcccg ccgtcggcgc
     4021 ggcgaccgcg ccctgatatt tggcataaac agtttgataa cggctgtcgt cgtccgcatc
     4081 ggcggcacgt tcgatataag gcggcagggg caggtgtccg ttctgttcca aaagttcgta
     4141 aacggtttga ccgccttcaa aacgcaggca gaacagttcg ccctcacgcc cgaccatcac
     4201 ggcacggata ccgccttcaa acaccagccc cataccgggc ttgggggact tggacgaacg
     4261 gatgtgcgcc aatgcggtat ggttgtccaa cacacgctca atcagggctt cgatcctgcc
     4321 gccgctgtct ttctgcccaa acagccgcgc cttcatgact ttggtgttgt tgaataccaa
     4381 aacgtcgcct gcctcgacat aatcgggcaa atcgccaaac acccggtctt gcagcggcat
     4441 atcgggcagc gcgaccaaaa gccggctgct gccgcgcacc tcgggcggat gctgggcaat
     4501 caggtgttcg ggcagggtaa agtcaaaatc tgaaatatcc atttttacac tctcgttcgg
     4561 gcaagccgcc attatacgca ctttagccct ttttcagacg gcatctttgc ccgaaaaacc
     4621 aacagattag aataaacact cttgactcgg ggcatcttgt gcgcaaaatc aaacttcctg
     4681 cacatttccc ccaaaaaccg ccgttttttg atattttact ggacatttac cgacaatttc
     4741 gggaaaatga acacaatttc acggtcgttt cccaccacag gaaaaccgta tccgaacacc
     4801 attccgcccg gtttgcgccg ttgccgcaag ccggctgttt tctgaaaaac caacgcaaca
     4861 acccgccgga acaccggcag cctttaaagg aacagaaatg gatttgcgca aattaaaaaa
     4921 actgattgat ttggttgaag aatcgggtat cgccgaaatc gaagtaaccg aaggcgaaga
     4981 aaaagtccgc attacccgta ccattgcagc tgcggcagct cccgtttacg ccgcgcccgt
     5041 acctgccgcc gcgccggccg taacgccggc cgccgcaccc gttgcggcat ccgcgcccgc
     5101 cgccgcgccg gccgcccgcg atttgtccga cgctcaaaaa tcgcctatgg tcggcacgtt
     5161 ctaccgcgcg cccggcccga atgccgccgc atttgtcgaa gtcggtcaac aggtcaaagc
     5221 cggcgacacg ctgtgcatca tcgaagcgat gaagctgatg aacgaaatcg aagccgaaaa
     5281 atccggcacg gtcaaagaaa ttctggtcga aaacggtacg cccgtcgaat tcggcgaacc
     5341 gctcttcatc atcggataat cctgttttca gacggcataa acttccgatg ccgtctgaaa
     5401 tgctttcccc cttcagcgtt cccgcaccct tttttacgga cgggttgccg gaaccgcagg
     5461 aaaggtcatc atgctgaaaa aagttttaat cgccaaccgg ggcgaaatcg ccttgcgcgt
     5521 actccgtgcc tgccgcgaaa tgggcattgc caccgttgcc gtgcattccg aagccgacaa
     5581 aggcagcctg cacgtcaaac tcgccgacga atccgtgtgc atcggtcctg ccgcttctgc
     5641 gcaaagttat ctgaacattc ccgccatcat tgccgccgcc gaagtaacct gcgcggacgc
     5701 tgtccacccg ggctacggct tccttgccga aaacgccgat ttcgccgaac aggtcgaaca
     5761 gtccggcttt accttcatcg gcccgaaacc cgacaccatc cgcctgatgg gcgacaaagt
     5821 ctccgccaaa cacgcgatga tagcggcagg cgtgccctgc gtccccggct ctgacggcgc
     5881 attgcccgac gatgatgccg aaatcctcaa aatcgccgac aaagtcggtt atcccgtgat
     5941 tatcaaagca tcgggcggcg gcggcgggcg cggtatgcgc gtggtcgaga aaaaagaaga
     6001 cctcctccag tctgtcgaaa tgaccaaggc tgaagcgggc gcggcgttcg gcaacccgat
     6061 ggtttatatg gaacgctacc tgcaacgccc gcgccacgtc gaaatccaag tgcttgccga
     6121 cgaacacggc aacgccgtct atcttgccga gcgcgactgt tcgctgcaac gccgccacca
     6181 gaaagtcatc gaggaagcac ccgccccgtt tatcgatgaa gaggcacgca aaaaaatcgg
     6241 caaagcctgt accgacgcgt gcaaacgcat cggctaccgg ggcgcgggca cgtttgaatt
     6301 tttatacgaa gacggcgaat ttttctttat cgagatgaac acgcgcgttc aggtcgagca
     6361 tccggttacc gaactcatca ccggcgtgga catcgtccaa gagcaactcc gcatcgcatc
     6421 cggcctgccg ctgcaataca aacagaaaga catcaaaatc gaaggccacg ccttcgagtg
     6481 ccgcatcaat gccgaagacc cgtacaactt catccccagc ccgggcccga ttgaaagctg
     6541 ccacctgccc ggcggcttcg gcatccgcgt ggacagccac atctaccaag gctaccgcat
     6601 cccgccgtac tacgacagcc tgatcggcaa aatctgcgta cacggaaaaa cgcgtgaaca
     6661 ggcaatggcg aaaatgcgcg tcgcactcgc cgagctggcg gtaaccggca tcaaaaccaa
     6721 tacgccgttg caccgcgacc tgttcgccga tgcgggtttc caagaaggcg gagtgagcat
     6781 ccattacctg gagcactggc tggaagcgcg caaaaccaaa caggacaaat aagccgccgc
     6841 cgatatgccg tctgaagccg cccttccgcg ttcagacggc atttcccttg ccccgccgtc
     6901 tgaaaccgat ttcgatattt ccaagaaagc ccgttatgcc ctaccaacaa atcaccgtca
     6961 acgtcaacga tgccgtcgcc gaacgcctcg ccgacgcgct gatggaacac ggtgcactct
     7021 ccgccgccat cgaagatgcc tgcgccggca cgcaaaacga acaggcgatt ttcggcgaac
     7081 ccggtatgcc caccgaacaa atctggcagc agagcaaagt catcgccctg ttcggcgaac
     7141 acgacgaagc cgccgccgtc atcgatgccg ccgcacaaga atgcgggtta aaagacttgg
     7201 catacaccgg cgaaaccatc gaagaccaag actgggtgcg cctcacgcaa tcgcaattcg
     7261 accccatccg aatttccgac cgcctgtgga ttaccccctc ttggcacgaa gcccccgaag
     7321 gctgcgccgt caacctccgc ctcgatcccg gactcgcctt cggcaccggc agccacccga
     7381 ccacgcgcct ctgcctcaaa tggctggata cgcaactcaa aaacggcgaa agcgtcctcg
     7441 actacggctg cggttcgggc atcctgacca tcgccgccct caaactcggt gcaggttccg
     7501 ccgtcggcgt ggatattgac gaacaggccg tccgctccgg cagggacaac gccgaacaga
     7561 acaacgtcga tgcacaattc ttcctgcccg acagtctgcc tcaagggcaa ttcgacgtag
     7621 ttgtcgccaa catcctcgcc aaccctttgc gtatgctcgg cgaaatgctt gcagcccgca
     7681 ccaaacaggg cggacgcatc gtgttgtccg gtttgttgga tgaacaggcc gaagaactcg
     7741 gcggcattta cagccaatgg ttcgatctcg acccggcgga aactgacgaa ggctgggcgc
     7801 gcttgaacgg cgtaaaacgc tgaaacggaa aggaaacacc gtgcaggaca aaaacaacct
     7861 ctgctggctc gatatggaaa tgacggggct gaatcccgaa accgaccgca ttatcgaagt
     7921 cgcgatgatt attaccgact cggatttgaa tgtgttggcg caatccgaag tttacgccat
     7981 ccaccaaagc gacgatctgc tcgacaatat ggacgagtgg aacaccgcca cacacggcag
     8041 gacggggctg acgcagcgcg tgcgcgaatc gtcgcatacc gaagccgaag tcgaacagaa
     8101 actgctggac tttatgtcgg aatggatacc cggacgcgcc acaccgatgt gcggcaactc
     8161 catccaccaa gaccggcgtt ttatggtcaa atatatgccg aaactggaaa actacttcca
     8221 ctaccgcaac ctcgacgttt ccacgctgaa agaactcgcc aaacgctgga atccgcccat
     8281 tgccaaaagc gtcgtcaaac gcggttcgca caaggcattg gacgacattt tggagagcat
     8341 cgaagaaatg cgccactacc gcgaacactt cctgatttcc gccccgaaag ccgaagcgca
     8401 ataagaaaca aacaatgccg tctgaaacgc tat
//
LOCUS       DAWXHA010000091         8355 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.091, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000091 DAWXHA010000000
VERSION     DAWXHA010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8355
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.091"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(75..509)
                     /gene="queD"
                     /locus_tag="AABD07_001649"
     CDS             complement(75..509)
                     /gene="queD"
                     /locus_tag="AABD07_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HFB2356134.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGTIKGG
                     AKDGMVMDFTDLKAIVKQHITDHFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYCRLKNAGLNVCRVKLWETPTSCAEYEGGEGIF"
     gene            complement(597..1112)
                     /locus_tag="AABD07_001650"
     CDS             complement(597..1112)
                     /locus_tag="AABD07_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HFB2356135.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DTDKIHIDGWQVVEWADGYDIAVSETPKTKMPPENAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDYVRQHKDNLKDVDNLLALEHIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            complement(1140..1799)
                     /gene="queC"
                     /locus_tag="AABD07_001651"
     CDS             complement(1140..1799)
                     /gene="queC"
                     /locus_tag="AABD07_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HFB2356136.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHA
                     VELERAEWIAQDLGVSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNAL
                     FLLYAAIFAKGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGVLDYIREQTHTCYKGIVGGCRECPSCILRERGLAECLESKKA
                     V"
     gene            complement(1984..2189)
                     /locus_tag="AABD07_001652"
                     /pseudo
     CDS             complement(1984..2189)
                     /locus_tag="AABD07_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779592.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
     gene            2288..3514
                     /locus_tag="AABD07_001653"
     CDS             2288..3514
                     /locus_tag="AABD07_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HFB2356137.1"
                     /translation="MTFLQRWQGLADNKICAFAWFVIRRFSEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYIDAFRDQANRLTA
                     IGSVMLVVTSLMLIRTIDNAFNRIWRVNTQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDSVLSSGAQQWADALKTAARLAFMTLLLWGLYRFVPNRFVPARQAFVGALITA
                     FCLETARFLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGRTLSVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELSELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(3535..3816)
                     /locus_tag="AABD07_001654"
     CDS             complement(3535..3816)
                     /locus_tag="AABD07_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFB2356138.1"
                     /translation="MIREEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDEAASHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(4009..5730)
                     /locus_tag="AABD07_001655"
     CDS             complement(4009..5730)
                     /locus_tag="AABD07_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HFB2356139.1"
                     /translation="MDYLQNLSLGLTKKLPVILQTEVAECGLACLAAVAGFYGFYTDL
                     RALRSKYCLSLKGENLADIVRFADDMGLTGRALRLDLDELGSLRLPCILHWDLNHFVV
                     LESVSSDGAAVMDPASGRRKVKTEEISRKFTGIALELWPNTRFEAGEEKQEIRILPML
                     RGISGLGRTLFQLLALAAAMEVFALVSPFFMQWVIDHVVVTGDRNLLATLALGFTLLL
                     LVQNTVSVMQGWLGMHFSTTLNVQWKSNVFKRLIDLPTDYFAKRHLGDVVSRFGAVDS
                     IQGTLTSTFFVLVLNSLTAVFTFVLMIVYSPILTGLVAATLVVYIAVRWVAYYPLRRA
                     TEENIIHAAKQSSYFMETVRGIRAVKQFGKGPQRYSAWMGLLVDTVNTGLTVQKLGIW
                     FGLANKLLFGLANILIIYLAAGMVLDGVFTVGVLMAFLAYKGQFEGRIGSLVDQFVQI
                     KMLSLHAERLADTVLNETESEATPDVGIPDISDDIEISVENVSFRYADNEPYVLQNVS
                     FKIGRGESLALIGRSGCGKSTFLDILSGNLPPESGKVMINGHDIYSLPPRFIRNLSAM
                     VRQDDVL"
     gene            complement(5832..6047)
                     /locus_tag="AABD07_001656"
     CDS             complement(5832..6047)
                     /locus_tag="AABD07_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356140.1"
                     /translation="MDFAHYLKHWKAAVLIYLAISILTDILCYFLNFDGVFYKGRFFS
                     VTVAGPVGALSFLAYLLYLKREENRSH"
     gene            complement(6061..6408)
                     /locus_tag="AABD07_001657"
     CDS             complement(6061..6408)
                     /locus_tag="AABD07_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356141.1"
                     /translation="MRELTMNEMTAVFGGTEGTWGHRGRVSGEWVGSKVGGALGSFAG
                     AFTGMAGGALVTGGNPAGIAIGGAGGGWVGAEGGSALGGHIGGFAGAKWGKMIDRRNC
                     QCGEDCHCDPCNC"
     gene            complement(6593..7867)
                     /locus_tag="AABD07_001658"
     CDS             complement(6593..7867)
                     /locus_tag="AABD07_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HFB2356142.1"
                     /translation="MNRPKQPFFRPEVAIARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTMEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ISQQIDGQKRRIRLAEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEA
                     GLLQEIRTQNLTLASLPKRHETEQSQLERTIADISQEVLDFEMRSEQIIRAGRSGYIA
                     IPNVEVGRQVDPSKLFLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKF
                     GLASGSVVSVAKTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPL
                     QIGMTLEADILHEKRRLYEWVLEPIYSMSGRL"
     gene            complement(7928..8282)
                     /locus_tag="AABD07_001659"
                     /pseudo
     CDS             complement(7928..8282)
                     /locus_tag="AABD07_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1961 a         2162 c         2063 g         2169 t
ORIGIN      
        1 ctgaggcgag gcaacgccgt accggtttaa agttaatcca ccatacctta tttgaattga
       61 ctatatcgat acgttcaaaa tattccctcc cccccttcat actccgcgca cgatgtcggc
      121 gtttcccaca atttgacgcg gcacacgttc agccccgcgt ttttcagacg gcagtacatt
      181 tcgaccgcca tattttcggc agttgtgcgg cagggcaggc gcagggtttt catgttccag
      241 ccttccaaaa gcgcggcgat ttgagattcg cgcccgttgc cgccgtggta gatgaaggcg
      301 tggtcgaaat ggtcggtaat gtgttgtttc acaatggctt tcaagtcggt aaagtccatc
      361 accataccgt ctttcgctcc gcctttgatg gtgccgtctg aaacggtgat ttcgagtttg
      421 taggtatgtc cgtgcaggtt ttggcatttg ccgtcatgcc cgtcgagcat atgcgaggag
      481 tcgaaggtaa atatcttggt aattttcatc ccgattcctt ttcagtgaaa accccgccgc
      541 tttccgcccg gagggtggct tgatgtgtcg ttttgcgtgg aaacatatcc gctgcttcaa
      601 atgggcaaat agccttgaaa gccgatttcg gcgggtttgc cgtgcggatt cggggtcagg
      661 cggatatgga aattgccgat gtgctcgagc gcaagcaggt tgtccacgtc tttcaagttg
      721 tctttatgct gccgaacata gtcggtcaac agggtttgca gggctttttg tttggcttcg
      781 gcaggcgtgg cggcggcgaa cagcccgaac gcgtgcgcct cggcaagctg ccccgcgcga
      841 tagccgccga cattggcaaa atacaggcgc ggagcgtttt caggcggcat tttcgttttg
      901 ggcgtttcgg atacggcgat gtcgtaaccg tccgcccatt cgacaacctg ccaaccgtcg
      961 atgtggattt tgtccgtatc gccgaaccac gcggctttga gtgcggggac ggcttcgcgg
     1021 tagtcgtcgc acacggcaaa ttggatgtcg tgcacttcga tattcgaccg gccggcattg
     1081 ccgccgaggt aaaacatatg gagcttgggc atatcgtatt ccttgtgctt tgcgcgcgtt
     1141 cagacggcct ttttactttc cagacattcc gccagcccgc gttcgcgcaa gatacagctc
     1201 gggcattcgc ggcagccgcc gacgataccc ttgtagcagg tgtgggtctg ttcgcggatg
     1261 tagtccaaca cgcccatttc gtccgccaac gcccacgttt gcgccttggt caggtacatc
     1321 agcggcgtgt ggatttgaaa atcgtagtcc atcgccagat taagggtaac gttcatggat
     1381 ttgacgaaca cgccgcggca gtcgggatag cccgaaaaat cggtttcgca cacgcccgcg
     1441 atgatgtgcc ggataccctg ccctttggca aaaatggcgg cgtaaagcag gaaaagcgcg
     1501 ttacgcccgt ccacaaaggt attgggaacg ccgttgtcgg cggtttcgat ggcggcggtt
     1561 tcgtccatca gggcgttgtg cgtaatctgc cgcatcaggc tcaaatcgag tacggtttga
     1621 ctgacaccca aatcctgcgc gatccactct gcgcgttcca gctcgacggc atggcgttgc
     1681 ccgtatcgga aggtgatggc ttggacgttt tcgcgcccgt aggtttggat tgcctgaatc
     1741 aggcaggtgg tcgaatcctg accgcccgag aagatgacca aggctttttg gtttgacata
     1801 tcgaatccta gttttggtaa cgcgggaggt ttgcgaaccg cgaagttgga cagtaaagac
     1861 gcggattata caggcaaacg cgttcagacg gcatctgaac gccatgccgt ctgaacacgc
     1921 ggcgtatgcc gacttgacgg cgagttccgc caagcgtctg ccttgtgcga aggcgatatt
     1981 gttttcttcg gcggtcagga cgggagccgc tgtcgggaat atctttattt gacggcttcg
     2041 cagacggcgg acactttggg gacggtgcgc aatacggctt cgcaaccttc aacgctgtcg
     2101 atgccgcgag tgattcggcg tgcgggattg cgggtgctgc cgttttggga atagtagagg
     2161 acgaggattt tgaggggatt tgggttcatg ggcggattcc gttaaaatag tttggtgttc
     2221 agacggcata acggttgtcc agatgccgtc tgaaacagtt tgaaaacatg aaacctggta
     2281 agagattatg acctttttac aacgttggca aggtttggcg gacaataaaa tctgtgcatt
     2341 tgcatggttc gtcatccgcc gtttcagtga agagcgcgta ccgcaggcag cggcgagcat
     2401 gacgtttacg acactgctgg cactcgtccc cgtactgacc gtaatggtcg cggtcgcttc
     2461 gattttcccc gtgttcgacc gctggtcgga ttcgttcgtc tccttcgtca accaaaccat
     2521 tgtgccgcag ggcgcggata tggtgttcga ctatatcgac gcattccgcg atcaggcaaa
     2581 ccggctgacc gccatcggca gcgtgatgct ggtcgtaacc tcgctgatgc tgattcggac
     2641 gatagacaat gcgttcaacc gcatctggcg ggttaacacg caacgcccct ggatgatgca
     2701 gttcctcgtt tattgggcgt tgctgacttt cgggcctttg tctttgggtg tgggcatttc
     2761 ctttatggtc gggtcggttc aagactccgt actctcctcc ggagcgcaac aatgggcgga
     2821 cgcgttgaag acggcggcaa ggctggcttt catgacgctt ttgctgtggg ggctgtaccg
     2881 cttcgtgccc aaccgcttcg tgcccgcccg gcaggcgttt gtcggagctt tgattacggc
     2941 attctgcctg gagacggcac gtttcctgtt cacctggtat atgggcaatt tcgacggcta
     3001 ccgctcgatt tacggcgcgt ttgccgccgt gccgtttttc ctgctgtggt taaacctgct
     3061 gtggacgctg gtcttgggcg gggcggtgct gacttcgtcg ctgtcttatt ggcagggcga
     3121 ggccttccgc aggggattcg actcgcgcgg acggtttgac gacgtgttga aaatcctgct
     3181 gcttctggat gcggcgcaaa aagaaggccg aaccctgtcc gttcaggagt tcagacggca
     3241 tatcaatatg ggttacgatg aattgggcga gcttttggaa aagctggcgc ggtacggcta
     3301 tatctattcc ggcagacagg gctgggtttt gaaaacgggg gcggattcga ttgagttgag
     3361 cgaactcttc aagctcttcg tgtaccgccc gttgcctgtg gaaagggatc atgtgaacca
     3421 agctgtcgat gcggtaatga cgccgtgttt gcagactttg aacatgacgc tggcggagtt
     3481 tgacgctcag gcgaaaaaac agcagcagtc ttgagtattt ttgaaactgt atttttatcc
     3541 taaagacatt ttcctatctg ctgattccac cgtttccttt ctgtgtgccg ccataatttt
     3601 tataatagac aagccattca agtttgcatt gactgctttt tcattggcaa tatccaaatg
     3661 actggccgct tcatctaaaa ataggatttt cggttcgcaa tataaggccc gcgccaatac
     3721 gatacgttgt ttttgtccgc ctgacagtgc gctgcccata tcgccgatca aggtttcata
     3781 gcccataggc atggcggaga tttcttcgcg aatcatagca aggcaggcgc aatgttcgat
     3841 ttttcctcta tccggttctg tatcgaaaaa acagatattc tctgcaattg agccagcaaa
     3901 tgcaaatata gtggattaaa tttaaatcag gacaaggcgg cgaagccgca gacagtacag
     3961 atagtacggc aaggcgaggc aacgccgtac cggtttaaat ttaatccact ataaaacatc
     4021 gtcctgcctg accatcgcac tcaaattgcg gataaaacgt ggcggtaagc tgtaaatgtc
     4081 gtgcccattt atcatgactt tgcctgattc gggaggtaga ttgccgctta aaatatccaa
     4141 aaatgtcgat ttaccgcagc ccgatcgtcc gattaacgca agcgattcac cacgtccgat
     4201 cttgaagctg acgttttgta aaacatatgg ctcgttatcg gcataacgga aagaaacatt
     4261 ttccactgag atttcgatgt cgtctgaaat atcaggaatg cctacatccg gcgtagcttc
     4321 cgattctgtt tcattcaata cggtgtcagc taaccgttcc gcatgaagtg acagcatttt
     4381 aatttgcaca aactgatcga ccagcgagcc aatacgtcct tcaaactgtc ccttataagc
     4441 caaaaaagcc attagtacgc cgacggtaaa gacgccgtcc aataccatgc ccgcagctaa
     4501 gtaaataatc aaaatatttg ccaaaccgaa aagcagcttg tttgccaagc cgaaccaaat
     4561 tcccagtttc tgcaccgtca gtcccgtatt aaccgtatcc accagcagcc ccatccatgc
     4621 agaatatcgt tgaggacctt taccaaattg cttgactgct cggataccgc gtaccgtttc
     4681 cataaaatag ctgctttgtt tggcagcatg gatgatgttt tcctccgtcg cccgtcgcaa
     4741 cggataatag gctacccaac ggactgcgat ataaactacc agtgtcgctg caaccaaacc
     4801 tgtcagtatc gggctgtaca ctatcattag cacaaaagta aaaacagccg ttaggctgtt
     4861 taaaaccaac acgaaaaacg ttgaagtcag agttccctga atactatcca ccgccccgaa
     4921 gcgcgatacc acatcgccca aatgccgttt agcgaaataa tctgtaggca aatctatcaa
     4981 acgtttgaaa acgtttgatt tccactgaac atttaacgtc gttgaaaaat gcatgcccaa
     5041 ccagccctgc atgacagaca ccgtattttg taccagaagt agcaaggtaa agcccaaagc
     5101 cagcgtcgct aacagattac gatcgcccgt taccactaca tggtcgatga cccattgcat
     5161 aaaaaacggc gacaccaaag caaacacttc cattgctgct gccaaagcca aaagctgaaa
     5221 caatgtccgc cccagcccag aaatcccgcg caacatgggt aggatgcgga tttcctgctt
     5281 ttcttcccct gcctcgaaac gcgtgtttgg ccacagttcc aaagcaattc ccgtaaactt
     5341 gcgcgatatt tcctccgtct tgactttgcg tcgtcccgaa gccggatcca tgacggcagc
     5401 cccgtccgaa gataccgatt ccagcaccac aaaatgattc aaatcccaat gtagaataca
     5461 gggcaggcgc aaactgccca attcgtctaa atccagcctc aacgcccgtc ccgtcagccc
     5521 catatcatca gcaaaacgaa caatatctgc caaattctca cccttaagtg acagacagta
     5581 ttttgaacgc agtgcgcgca aatccgtata gaaaccataa aatccggcca cagccgctag
     5641 acatgccaag ccacactccg ctacttctgt ttgcagtata acgggcagct tttttgtcaa
     5701 gcccaaagac aggttttgca gataatccat agatttcctt gttgaatcag aaaagagaga
     5761 tgggaagacg ggaatggttt ggaaaggccg tctgaaaagg tttcagacgg cctgcagccc
     5821 catattgact ttcaatgcga ccggttttcc tcgcgtttca aatacagcag atacgcaaga
     5881 aaagacaaag cccctacagg tcctgcgacg gtaaccgaaa aaaacctgcc tttgtaaaac
     5941 acaccgtcga agtttaaaaa atagcaaagg atgtcggtca ggatgctgat ggcaagataa
     6001 atcagcacag cggctttcca gtgtttcagg taatgtgcga aatccatttc aaactcccga
     6061 tcaacagttg cacgggtcgc aatggcagtc ttctccgcat tggcagttgc gcctgtcgat
     6121 catttttccc cattttgcac cggcaaaacc gccgatatgc ccacccaatg cagaaccgcc
     6181 ctcagctcct acccatccgc cgcctgcgcc gccgatggca attccggcag gatttccgcc
     6241 tgttaccaat gcgccgcccg ccattcccgt gaatgctccg gcaaacgacc ctaaagcgcc
     6301 gccgaccttg cttccgaccc attctccgga gactctgccc ctgtgccccc aagtaccttc
     6361 tgtgccgccg aaaacagcgg tcatttcgtt catggtcaat tctctcattt caaaactcct
     6421 tttatcgtca atcgaaaaat tgaaagggca gataccctat ccttgctttt acagacagag
     6481 tatctgtaaa agggggtagt ttcaggcagc ttcagtgttt atgtttttat gtagtgtttt
     6541 acaggtcgtc tgaagaggtt tcagacgact ttttatcttt cagcctcaag ccttacaacc
     6601 tgcccgacat actataaatc ggctccaata cccattcgta cagccgccgt ttctcgtgta
     6661 ggatgtctgc ttccaacgtc atgccgattt gcagcggttt ttcctcaccg tatgcagtga
     6721 tggttggttt gtcgggtttt attttcacga gataaacagg ttcgttgctc ttcgccaaat
     6781 cggaggatac catgcccaat cccgacaatt cctgtctgcc cagtgccgtt tttgccactg
     6841 atacgacact gccggaagca agcccgaatt tttgataggg atatgcctga taacgcagga
     6901 caaccttgtc tttcggcttg ataaagcctg ctgcactgct ggggatatat agatgggcat
     6961 ataactcggt acgttcggga acaatgctca agaacagttt ggaaggatca acctgccgtc
     7021 cgacttcgac gttcggtatt gctatataac ccgaccgtcc tgcacggatg atttgttcag
     7081 agcgcatttc aaaatccaaa acttcttgag aaatatcggc aatggtgcgt tcaagctggc
     7141 tttgttctgt ctcatgccgt ttggggaggc tggccaatgt cagattctgc gtgcggattt
     7201 cctgaagcag cccggcttct tctcggcggt aggcatcaag tttggctttc tgctctaaaa
     7261 gctctgcctc gacattcatc atttcttgtt ttgacactgc atcattggcg gataggaaac
     7321 gatatttccg caacatttct tccgcaagtc taatgcgcct tttctggccg tctatctgtt
     7381 gcgaaatatg gagtttctgg ttttccaaac gttcgacagt tgctttaagg ctgcgcgttt
     7441 cattctcgtg tatcagcttc agacgaccca gttcctgttc tgccaacgtt ttcttcaaaa
     7501 ctgcctccgt tttcaactgc tgctgcacgc tacctcctgc gccgaaacgt gaggtcgaaa
     7561 gcgcaaatag cttgtcgcca gccttaacct tttctccatc ttccacgaat ttcgctgtaa
     7621 ttgtccccgt atccggtgca tacaccctga ttacgcccga tgcaggtaga atttgtccct
     7681 ccattgttgt ctttcgcgta tagttaccga atatcaaaaa caggataatc agtaacgcag
     7741 atatcgatgc aaatgtcgtc cacagggaaa atgacaacgg gcgtgtcaga atcactttac
     7801 ccgtcaggct ggtttggcgg gcaatggcga cttcagggcg gaagaaaggt tgcttgggtc
     7861 tattcataaa attgaagtta agaaagtttc agacgacccc tagagatcgt ctgaacaatg
     7921 agaaatatca gcagtaatct gtaccgtcag tgtagccgtt tcctgattta tctgcttttg
     7981 ttgcgggagc agttaatcca tgttcaatct caaagattgg tcttccgtta taaggaggtg
     8041 cattaacggc atcatttacc caatcacgag tcagattgta tacaccattt gcaccatata
     8101 gcaccgaaaa aatttttcgg caggaaatga actgtcgctg cagcagcagg tattgcaaca
     8161 aaatcccccc atgtgggacc tcctttggtt gtggcagcat tagctacatt tccagctata
     8221 ttgtctgtta caggacctcc ccctgaaacc agcttcaatt catgaagttg aagttcaatc
     8281 atttttatac tccttttctt ggttggtatt cctaaaaatt cggctaacaa aaacatatgg
     8341 cagatatatt gaaaa
//
LOCUS       DAWXHA010000092         8140 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.092, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000092 DAWXHA010000000
VERSION     DAWXHA010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8140
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.092"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            491..2218
                     /gene="ilvB"
                     /locus_tag="AABD07_001660"
     CDS             491..2218
                     /gene="ilvB"
                     /locus_tag="AABD07_001660"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HFB2356143.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELVETIKKAFQIAASGRPGPVVLDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNILSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRTDGKA"
     gene            2229..2720
                     /gene="ilvN"
                     /locus_tag="AABD07_001661"
     CDS             2229..2720
                     /gene="ilvN"
                     /locus_tag="AABD07_001661"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HFB2356144.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2787..3080
                     /locus_tag="AABD07_001662"
     CDS             2787..3080
                     /locus_tag="AABD07_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HFB2356145.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYNLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAV"
     gene            3160..4173
                     /gene="ilvC"
                     /locus_tag="AABD07_001663"
     CDS             3160..4173
                     /gene="ilvC"
                     /locus_tag="AABD07_001663"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HFB2356146.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRHGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVAANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVAELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGARLRAMMPWITANKLVDQ
                     DKN"
     gene            complement(4292..5287)
                     /locus_tag="AABD07_001664"
     CDS             complement(4292..5287)
                     /locus_tag="AABD07_001664"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HFB2356147.1"
                     /translation="MNLKNRHFLKLLDFTPEEITTYLDLAAELKDAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGADATYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFAQETVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKGVGFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPAGIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(5429..8014)
                     /gene="acnB"
                     /locus_tag="AABD07_001665"
     CDS             complement(5429..8014)
                     /gene="acnB"
                     /locus_tag="AABD07_001665"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HFB2356148.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKNPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLVSPKYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVNILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKVGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVIPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRALERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKSDIPVRLWVAPP
                     TKMDAKELSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
BASE COUNT         1883 a         2017 c         2202 g         2038 t
ORIGIN      
        1 tggttctgtc aatgccgtcc ggtgcaatga gccattttca ggaagtatgg ttgggaatat
       61 ttttgatata tcaaaaataa aatcaagttc aatcaatatc ccgagtgaaa ccctgtaaat
      121 tttaaaattc ttgatacttt cacatctgcc cccatgcaaa ctgtcaacaa tttccatctt
      181 tcaaaaaagg tactcctgat tttattcttt taaaatcaat caataatttc tccgctttca
      241 aaaaaatttc tccgctttca aaaaatatta aaagatgaaa gatttttctt gattgaactg
      301 tcggtttgcg ttatcgtttt tactcttttt cacaaactct gtgttccttt ccaattgatt
      361 ggataatctg tctgttgccg tgttccccca atgcgcgtac cctaaatcgc tgcttggtgg
      421 aattgcatta caggtgctgt ggcaaagcgg tttgtcccta ttggtttgaa accgtataaa
      481 agaggtcgtt atgcagttat caggcgcgca aatcatagtg cagagtctca aagccgaagg
      541 cgtcgagtac gttttcggtt atcccggcgg tgcggttatc gaaatctacg atgccctgtt
      601 ccaactcaat aaattcaaac acattcttac ccgccatgag caggcggcag tacacgcggc
      661 agatgcgtat gcgcgcgtca gcggtaaggt gggcgtggca ttggttacat ccggcccggg
      721 cgttaccaat gcgctgaccg gtattgctac tgcctatacg gattcgattc cgatggtggt
      781 catcagcgga caggtaggca attccctgat tggtacggat gcgttccaag aagttgatac
      841 ggtgggtatt acccgtccgt gcgtcaaaca caatttcttg gttacggaca tcaatgagtt
      901 ggtggaaacc attaaaaagg cgttccaaat tgccgcaagc ggccgaccgg ggcccgtggt
      961 gcttgatgtc ccgaaagatg ttacgcaggc gatggcgaaa ttcagctatc ctcaggaaga
     1021 catttttatc cgttcgtatc aaccggttgt tcaagggcat atcggtcaga ttaaaaaggc
     1081 cgtgcagatg ttggcatctg ccaaacgccc ggtcgtctat tttggcggcg gcgtggtgtt
     1141 gggtaatgct tctgaagagc tgacccgatt tgtccgaatg acgggtgctc cgtgcacggg
     1201 tacgctgatg ggcttgggcg cttatccttc cggcgaccgc caattcctcg gtatgctcgg
     1261 tatgcacggt acttacgagg caaaccttgc catgcagaat gcggatgtcg ttcttgccgt
     1321 aggtgcgcgt tttgacgacc gtgtggtttc cgtaccgtcc aaatttttcg agaaggcgaa
     1381 gaaggttatc catatcgatg tcgatccttc cagcatcgcc aaacgcgtga aggcggacat
     1441 tccgattgtc ggcgacgtga aaaacatttt gtccgagatg gttgcgctgt ggcaaaaaca
     1501 agagtccgtg ccgtctgaag atgctttggg caaatggtgg aaaaccatag aggaatggcg
     1561 ttcccgcgat tgcttgtggt ttgacaacgg cagcgaaatt atcaagcccc aatatgtgat
     1621 tcagaagctt gccgagatta ccggcaattc ggcaatcatc acatcggatg tagggcagca
     1681 tcaaatgttt gcggctcaat attatccttt cgaacgtccg cgccaatggc tcaactccgg
     1741 cggtttgggt acgatgggcg tgggtctgcc ttatgcgatt ggtgcaaaac ttgccgcccc
     1801 ggatcaagac gtattctgta ttaccggcga cggctcgatc cagatgaaca tccaagagtt
     1861 gtccacctgt ttccaatatc ggattccggt taacgtcatt acgctgaaca acggttatct
     1921 gggtatggta cgccagtggc aggaaatata ttacggcggt cgagagtcgg aaacctattt
     1981 cgattctttg cccgatttcg tcaaacttgc cgaggcatac ggccatatcg gcatccgcgt
     2041 ggacaagaaa tctgatgtgg aaggtgcctt gttggaagca ttgaaccaaa aagacaggct
     2101 ggtgtttatc gacttcctga ccgaccagaa acagaatgtg atgcctatgg tcggcaacgg
     2161 caaaggtttg gacgaaatgg tacttccgcc gcatatgcgt acggacggaa aggcgtaagg
     2221 agaggcaaat gcgacatatc ttatctgttc tgatcgaaaa cgaatcaggt gcgatgagcc
     2281 gcgtggtcgg tttgttctct gcacgcgatt acaatatcga ttctttggcg gttgcgccga
     2341 ccgaagacaa aaccctgtca cggatgacca tcgttaccca cggcgacgag caggttatcg
     2401 aacaaatcac caagcaactc aataaattga ttgaagtgat taaagtggtc gatttgaacg
     2461 aaagccgttt tgtcgaacgc gaactgatgt tggtaaaagt ccgtgccgcc ggcaaagacc
     2521 gcgacgaatt tttacgcttg accgaaatct accggggcag catcatcgac gtaaccgacc
     2581 gcagctatac gattgaaatt accggctcga ccgacaagct ggattccttt ttggaaacgg
     2641 tcggacgcgc ccaaattttg gaaaccgtac gtacaggtgc ggccggcatc ggtcgcggtg
     2701 agcgtatttt gaaaatttaa cgccgtaacc tttcagacgg catggtattt gaatgccgtc
     2761 tgaaaaacga acggcaggag agatttatgt cgaacattaa aattgtcgca ctggttaccg
     2821 tcaaaccgga atacacggaa acactggcag cacagtttaa agaactggtc aaagccagcc
     2881 gtgcggaaga gggcaacatc agctacaatc tccatcagga aatcggcaaa ccgaaccgtt
     2941 ttgttttcgt ggaaaattgg aaatcccaag cagctattga cgaacataat gccagcgcgc
     3001 atttccaagc cttcgtccag tccgtcgacg gcaaaaccga agcgttggaa atcgtattga
     3061 tgaatgaagt tgccgtttaa gcggcacact ctgtttaacc cgtccgaagc cgctcaacat
     3121 tttaaggctt cgacaaccat ttaccttaaa ggaaatcaaa tgcaagtcta ttacgataaa
     3181 gatgccgatc tgtccctgat caaaggcaaa accgttgcca tcatcggtta cggttcgcaa
     3241 ggtcatgccc atgctgccaa cctgaaagat tcgggtgtaa acgtggtgat cggtctgcgc
     3301 cacggctctt cttggaaaaa agccgaagca gccggccatg ttgttaaaac cgttgctgaa
     3361 gcgaccaaag aagccgatgt cgttatgctg ctgctgcctg acgaaaccat gcctgccgtc
     3421 tatcacgccg aagttgcagc caatttgaaa gaaggcgcga cgctggcatt tgcacacggc
     3481 ttcaacgtgc actacaacca aatcgttccg cgtgccgact tggacgtgat tatggttgcc
     3541 cccaaaggtc cgggtcatac cgtacgcagt gaatacaaac gcggcggcgg cgtgccttct
     3601 ctgattgccg tttaccaaga caattccggc aaggccaaag acatcgccct gtcttatgcg
     3661 gctgccaacg gcggcaccaa aggcggtgtg attgaaacca ctttccgcga agaaaccgaa
     3721 accgatctgt tcggcgaaca agccgtattg tgcggtggcg tggccgagtt gatcaaagca
     3781 ggttttgaaa ccctgaccga agccggttac gcgcctgaaa tggcttactt cgaatgcctg
     3841 cacgaaatga aactgatcgt tgacctgatt ttcgaaggcg gtattgccaa tatgaactac
     3901 tccatttcca acaatgcgga gtacggcgaa tacgttaccg gccctgaagt ggtcaatgct
     3961 tccagcaaag aagccatgcg caatgccctg aaacgcatcc aaaccggcga atacgcaaaa
     4021 atgtttatcc aagagggtaa tgtcaactac gcgtctatga ctgcccgccg ccgtttgaat
     4081 gccgaccacc aagttgaaaa agtcggcgca cgactgcgtg ccatgatgcc ttggattacg
     4141 gccaacaaat tggttgacca agacaaaaac tgattgtttt caaacgggac tgcctacaca
     4201 tcgtgtaggc agtttgttat atggataccg tctgaacatc gtgttcggac ggtatctgtg
     4261 ttgcggatga atttaaacag gcacagttct gtcagtcgcc cagagccgcg accattaccg
     4321 ctttaatcgt gtgcatacgg ttttccgcct gatcgaacac gatgccggcc ggactttcga
     4381 atacttcttc tgtaacttcc acaccgttca gcccgaaggt ttcgtaaatc cattcgccga
     4441 ctttggtttc gcggttgtgg aaggcgggca ggcagtgcat gaatttgact tgcggattgc
     4501 ccgatgccgc catcagttcg ggcgtaacgc ggtaatcttt cagcaaatcg atgcgttcct
     4561 gccagacttc tttcggctcg cccatgctga cccatacgtc agtatgaatg aaaccgacac
     4621 ctttgacggc ttcatgcgcg ttttcggtca gggtaatttt tgcaccggtt tctttggcgg
     4681 cggcgtgtgc ggcggcgata atgccttcag acggccacag gctttgaggt gcgccgatac
     4741 gcacgtccat ccccaatttt gcccctaaaa tcagcaggga attgcccatg ttgtaacgcg
     4801 cgtcgccgac gtaggcaaac gcggtttggt tcaaaggttt gccgctgtgt tcgcgcatag
     4861 tcagtgcgtc ggcaagcatt tgtgtgggat ggaactcgtt ggtcagcccg ttgaacacgg
     4921 gtacgcccgc atattttgcc aattcttcga cagtttcctg agcgaagccg cgatattcga
     4981 tggcatcgta cattctgcct aagacgcgcg ccgtgtcttt gatgctttct ttgtgcccga
     5041 tttggctggc ggacggttcc agataggttg catccgcgcc ttggtcgcgt gcggcgactt
     5101 caaacgcaca gcgtgtgcgc gtggatgttt tttcaaaaat cagggcgatg tttttccctt
     5161 tcatccgctg aatctcgcgc cctgcctttt tggcgtcttt caactcggcg gcaaggtcga
     5221 ggtaggtggt gatttcttcc ggcgtgaagt ccaaaagttt cagaaaatgg cggtttttca
     5281 ggttcactgt cgtttccttt atgtgggggc gtgaacgccg tatttgcagc gtttgcggaa
     5341 agaagggtta gcggaatgtt gcaatgccgt ctgaaggttg ttcagacggc attgcggtca
     5401 atcccttact ccatacggat gacggggatc aaacattcac ggtctcggct acttcgttgt
     5461 agctgtcgat ttcgttgaag ttcatatagc ggtagatttt atcgccctgt tcgttgatga
     5521 tgccgatatt ggcttgatat tcttcaacgg tcgggatttt acccagtttg gagcaaatcg
     5581 ccgccaactc tgccgagccg aggtaaacga aggtgttttt acccaagcgg ttcgggaagt
     5641 tgcgggtcga agtggacatg acagttgcac cttcgcgtac ttgggcttgg ttacccatac
     5701 acaacgaaca gcccggcatt tccatacgcg cgccggcgcg gccgagtacg ccgtagtgac
     5761 cttcgtcgga caactctttc gcgtccattt tggtcggcgg cgctacccac aggcggacgg
     5821 ggatgtcgct cttgccttcc aaaagtttgg aggcggcgcg gaagtggccg atgttggtca
     5881 tacaagaacc gatgaacact tcgtcgattt tggtgccgga gcgttcggac ataaagcata
     5941 cgtcgtccgg gtcgttcggg caggcgataa tcggctcttt gatgtcgtcc atgttgattt
     6001 caatcacggc ggcgtattcg gcatctttat ccgcttcgag caactcggga tttgccagcc
     6061 atttttccat agctttgatg cggcgttcca aagcgcgcgg atcttgatag ccgttggcaa
     6121 tcatattttt catcaacacg acgttggatt tcatgtactc gataatcggc tctttattga
     6181 gcttcacggt acagccggcg gcggagcgtt cggcggatgc gtcggtcaat tcaaaggctt
     6241 gttccacttt caaatcgggc aggccttcga tttcgaggat gcggccggag aagatgtttt
     6301 tcttaccggc tttggcaacg gtcagcaaac cttgtttaat cgcgtaaagc gggatggcgt
     6361 tcaccaaatc gcgcagggtt acgcccggtt gcagcttgcc gctgaaacgt accaatacgg
     6421 actcgggcat atcgagcggt attacgcccg ttgcggcggc aaaagcgacc aagcctgaac
     6481 ctgcggggaa ggaaataccg atggggaaac gggtgtggct gtcgccgcct gtaccgactg
     6541 tatcaggcaa cagcaggcgg ttgagccacg agtggatgac gccgtcgccc ggacgcaggg
     6601 acacgccgcc acgggtagaa ataaaggcgg gcagttcttt atgggttttt acatcgacag
     6661 gtttcggata ggcagcggtg tggcagaaag actgcatcac catatcggcg gagaagccca
     6721 aacaagccaa gtctttcaac tcgtcgcggg tcatcggccc ggtcgtatct tgcgagccga
     6781 ccgtcgtcat gcgcggttcg cagtaagtac ccggacgcac gccttgtcct tcgggcagac
     6841 cgcaggcgcg accgaccatt ttttgcgcca aggtgaaacc gactttgctt tcggcaggcg
     6901 cttgcggcag gcggaatgca gtagaggcag gcagtttcag ggcttcgcgc gctttggcgg
     6961 tcagaccgcg accgataatc aggttgatac ggccgccggc ttgcacttcg tccagcaata
     7021 cttgtgattt caattcaaac tcggcaacag tctcgccgtt tttcacgatt ttaccttcat
     7081 aaggaaggat attgacgaca tcgcccattt tcagcgcgga aacatcgact tcaatcggca
     7141 gcgcgccgga gtcttcttga gtgttgaaga aaatcggcgc gattttaccg cccaagcaca
     7201 cgccgccgaa gcgtttgttc ggcacgaacg ggatgtcttc gccggtatgc caaatgacgg
     7261 agttggtcgc ggatttgcgt gaagaaccgg taccgaccac gtcaccgacg taggcaaccg
     7321 gatggccttt ggctttgagt tcttccaaca atttaatcgg accgacttcg cccggtttgt
     7381 cgggcgtgat gccgtcgcgc gggtttttca gcatggccag cgcgtgcagc ggaatatcgg
     7441 gacgactcca cgcgtcgggc gcgggagaga ggtcgtctgt attggtttcg ccgtcaactt
     7501 tgaagacggt aacggtgatt ttttcgggaa ctttggcacg ggaggcgaac cattcggcat
     7561 ctgcccaaga ttgcaaaact tcctgcgcgt atttgttgcc tttttcggct ttttcctgaa
     7621 cgtcgtggaa ggaatcgaac atcagaagcg tatgtttcaa gcctttggcg gcaatgggcg
     7681 cgagtttgtc gtcgtccaag agttcgatta aggcgtggat attgtaaccg ccgagcatcg
     7741 tacctaagag ttcggtcgca tatttggggg aaaccagcgg gctggatgcg ctgccttcgg
     7801 caacggcagc caggaatgag gctttgactt tggcggcatc gtccacaccg ggcggaacac
     7861 ggtgggcaag cagctcgacc aagaactcgc cttcgcctgc gggcgggttt ttcagcagct
     7921 caaccaaatc ggcggtttgc tgcgcattca aagggagggc gggaatgccg agggcggcgc
     7981 gctcggcggc ggctttacga taggcttcta acatctcttt gttccttttt ccgtttttct
     8041 tttgtcgggt tgcaaatgat ctgcgttaaa tattgtaaac aacatttgta ccgctatcat
     8101 agactagttt taacaaaaat ggaactgtta tgacaggtaa
//
LOCUS       DAWXHA010000093         7930 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.093, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000093 DAWXHA010000000
VERSION     DAWXHA010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7930
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.093"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..3423
                     /locus_tag="AABD07_001666"
     CDS             <1..3423
                     /locus_tag="AABD07_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFB2356149.1"
                     /translation="SGFSPKPKTIILSLAGAFGALAFADTPNNTEQQKELNTIVVHGK
                     RSADQKGADDVYYKNVSNAYVGKEYLERYRVQSAGDVLKGLNGVYNMNTRTAGGAITP
                     NIRGITGKGRIPVTIDGTEQTIDVWMNNYGVGDRNYLDPALFRSIAVEKSPALTRGVK
                     SGVGGAMSIRTIEAGDIVPEGQKFGFQLKTEFANNRTRPANNLNQWLGWEDYRTLPLG
                     ATADGAGGGSDPITGQQSPQALVVDNFTPPQHKSGRDNWRFGGDRSYMAAAAFKTELS
                     DGLAAYSYRNKGNYFAGRKGAEGYLNNPVYDLQKCYDEGGSDFNCKNSATFIPNMARI
                     YHPGVEVLNSNTETKTLLLKNNWHLPGSHRLGWQYMRTDVRFGEINPFHTTYVMNMEE
                     HNETNRPKELSPQAQSIDSTIRTDTYKLGWAWKPENSRWVDLQANLWRIKTNSTRHQS
                     GGMDLSSARPDPFYDVWYWCTQRGRIPPEHVDNYSSCNDLMNDFGVNGLTKEQVLAMT
                     PNDNGQFRVISGAEQKTRVSRTGFDISNRFRLRDRLSMTLAADYQKEKLAEEVEIVNS
                     QDLFNLAGMVTGLTKLAGPRGGERREWGTNLVFDWQAADRLKISAGIRYHNFRGFDTA
                     LAEGRARRDPRYQAGDGTQHYADGAYLPYFELAGDQERRDWNVVAEQLRQAYQSGDAA
                     AIAAAVQAEQAHGARYHLLKYYDGSYRTDGYVYIGNDGRAYFDGRFGGVNEAQNQPLY
                     RVRPVYVPFVNGKLDSGALPQHFHDFVSNYQEKVTNPQGLHGTHYRYWAGVGNPIDCI
                     RSDAASCLAHNLSGKVTNFQVGYPEYGDDTGLGLKIIGRHYTEEQYWAQPKPIRAHAW
                     APTIAVSYDLTDNSRLFVRYAQMSRFPSVYEVGSFYNDVAYAGMPKAPNFRFKPERSR
                     SWEIGYSFNFAPYWSRLRAGDMRLTYYRNRIQNVIETTDYFRTVQYDRKDTAGLEWQS
                     RIDTGRFFAALGATYRLKQQMCDRDTAFDYDPYGAKGVPICIEGGYGSTRGYQALQPK
                     YSINLDAGVRLLGEKLELGLRGIYHSRVNTKQYDQLLQKDLGIIFDTTGKPHHWRSSL
                     TWDVYGRYRLHKNLNVNLGITNLTNRYYLDPMSNVAAPGPGRTVTFGLTAKF"
     gene            3638..4621
                     /locus_tag="AABD07_001667"
     CDS             3638..4621
                     /locus_tag="AABD07_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356150.1"
                     /translation="MSIRNKTLLAVLLCGVFGVAAAAPAGGSSQRKSQDPNSDPTTVR
                     PGTSDKQPFGAGKAGLAFSINNGGSWSKSINLDDGPVKYIRAKYQAPINGNDPYANVD
                     GTRNLQYLRLGDVKPVIGWFYNPTLGQVWYENHHNNTEVYSVRQIANPAIPAAPKFGG
                     LVIAKVPGMGGSNGNVFFGEWAPRAGNPQQISTDLNMADGKRTVWYVGDNPTGNTTGV
                     RTATYNVLGINKHTPGQNDFYTGQVTATFGSGITGTMAGRISRSSDHVDFDHAKIDNR
                     NGTFADPSQGMTGRFYGNQAAAMAGYTTRGTGNVGDDVAFGGSATDIETRK"
     gene            4892..6382
                     /locus_tag="AABD07_001668"
     CDS             4892..6382
                     /locus_tag="AABD07_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HFB2356151.1"
                     /translation="MNKPLSLALFCLLLPITAHADNPADERRRLLDEGSRQTQQYRES
                     GWLDTEQARGEVEENDGYISIGGEIYQVGDTAEELESAIYHALNARQWHKVRQFAARY
                     AKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNPRLLLEAGRFYAEDNQ
                     NKESAAAFEKVLKTDIPAETRPIVENYLSELGKRRRWHGQISLGYGYNSNVNQGNGIN
                     QCVWEIAGMCLMERTLPAPTDSTFSSYSATAEKTVPLKGNHGVQVRGVLYGNRYTEKD
                     KDSAAMPDYGYRNGSLYAGYAYADARSSFSLLPYFEYDFRNRHTHYRAWGADADWSRT
                     LSPHWRINSHAGAKKTGYGGQSKTYFADFKQYELGAGAEFSITLKSGLLVNFDAARKA
                     YPEKSSSSKEYTARLGAYRLFSGGTYLNAVLLYRRSLYDAASFVSDNKRRRDKQYIMM
                     AAAGFPQWNIKGVYPELRFRRTIAHSNAVYYRYRQNEWLLGFKYRF"
     gene            complement(6450..7847)
                     /gene="aspA"
                     /locus_tag="AABD07_001669"
     CDS             complement(6450..7847)
                     /gene="aspA"
                     /locus_tag="AABD07_001669"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HFB2356152.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEAFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAESGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHRNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
BASE COUNT         1879 a         2309 c         2145 g         1597 t
ORIGIN      
        1 tccggattct cccccaaacc taagaccatt atcctaagcc ttgcaggtgc atttggcgca
       61 ttggcttttg cagacacccc gaacaatacc gaacagcaga aagaactgaa taccatagtc
      121 gtccatggca aacgcagtgc cgaccaaaaa ggcgcggacg acgtgtatta caaaaacgtc
      181 tccaacgcct acgtcggcaa agaatacctc gaacgctacc gcgtccaatc cgccggcgac
      241 gtactcaaag gcctaaacgg cgtgtacaac atgaacaccc gcaccgccgg cggcgccatc
      301 acgcccaaca tacgcggtat caccggcaag ggccgcatcc cggttaccat agacggcacc
      361 gaacaaacca tcgacgtatg gatgaacaac tacggcgtgg gcgaccgcaa ctacctcgac
      421 cccgccctgt tccgcagcat cgcggtggaa aaaagccccg ccctcacgcg cggcgtgaaa
      481 tcgggcgtcg gcggcgcgat gtccatccgc accatcgaag ccggcgacat cgtgcccgaa
      541 gggcagaaat tcggcttcca gctgaaaacc gagtttgcca acaacagaac ccgcccggcc
      601 aacaacctca accaatggct gggctgggaa gactaccgca ccctgccgct cggcgccacc
      661 gccgacggcg cgggcggcgg ttctgacccg atcaccggac agcagagccc gcaggcgttg
      721 gtggtagaca actttacccc gccgcagcac aaaagcggcc gcgacaactg gcgcttcggc
      781 ggcgaccgca gttatatggc cgccgccgcc ttcaaaaccg aactttcaga cggccttgcc
      841 gcctacagct accgcaacaa aggcaactac ttcgccggtc gcaagggtgc ggaaggctac
      901 ctgaataatc cggtatacga cctgcaaaaa tgctacgacg aaggcggcag cgatttcaac
      961 tgcaaaaatt ccgccacctt catccccaat atggcgcgca tctaccaccc cggggtggaa
     1021 gtgctcaaca gcaacaccga aaccaaaacc ctgctgctga aaaacaactg gcacctgccc
     1081 ggcagccatc ggctcggctg gcaatatatg cgcaccgacg tgcgcttcgg agagatcaac
     1141 cccttccaca ccacctatgt gatgaatatg gaagagcaca acgagaccaa ccgccccaaa
     1201 gaactgtcgc cacaggcgca gagcatcgat tccaccatcc gcaccgacac ctacaaactc
     1261 ggctgggcct ggaagccgga aaacagccgc tgggtcgatc tgcaggccaa cctgtggcgc
     1321 atcaaaacca acagcacccg ccaccagagt ggcggcatgg atttgtcttc cgcccgcccc
     1381 gatcccttct acgacgtttg gtattggtgt acccaacgcg gccggatacc gcccgagcac
     1441 gtcgacaact acagcagctg caacgacctg atgaatgatt tcggcgtcaa cggcctgacc
     1501 aaagaacagg tgttggccat gaccccgaac gacaacggcc aattccgcgt gatttccggc
     1561 gccgagcaga aaacccgcgt cagccgcacc ggtttcgata tcagcaaccg cttccgcctc
     1621 agagaccgcc tgagcatgac cttggccgcc gattatcaga aagagaaact ggcggaggaa
     1681 gtggaaatcg tcaattcgca agacctgttc aacctggccg gcatggtaac cggcctgacc
     1741 aagctggccg ggccgcgcgg cggcgagcgg cgcgaatggg gcaccaattt ggtgttcgac
     1801 tggcaggccg ccgaccgcct gaaaatctcc gccggcatcc gctaccacaa cttccggggc
     1861 ttcgataccg ccctggccga agggcgtgcc cgccgcgacc cgcgctatca ggcaggcgat
     1921 ggaacccagc attatgccga tggtgcctat ctgccgtatt tcgaactggc aggcgatcag
     1981 gagcggcgtg actggaatgt ggtggccgaa cagcttcggc aggcgtatca gtcaggcgat
     2041 gctgccgcca ttgccgcggc agtacaggca gaacaggcgc acggcgcccg ttaccatttg
     2101 ctgaaatact atgacggctc gtatcgtacc gatggttatg tgtatatcgg caacgatggc
     2161 cgtgcctatt ttgacggacg gttcggcggg gttaacgagg cacagaacca accgctctat
     2221 cgggtgcgcc ccgtttatgt gccgtttgtc aacggcaagc tggacagcgg cgcattgccc
     2281 cagcattttc atgatttcgt cagcaattat caggaaaaag tgaccaatcc gcaggggctg
     2341 cacgggacgc attatcgata ttgggcaggc gtggggaatc ctatcgactg tataagaagt
     2401 gatgcggcct cttgccttgc tcataaccta tcgggaaaag taaccaattt tcaagtcggc
     2461 tatcccgagt acggtgatga taccggtctc ggtctcaaaa tcatcggtcg gcactatacc
     2521 gaggaacagt attgggcgca gcccaaaccg atccgtgccc atgcctgggc gccgaccatc
     2581 gccgtcagct acgatctgac cgacaacagc cgcctgttcg tacgctatgc gcagatgagc
     2641 cgcttcccca gcgtgtatga ggtgggcagt ttttataacg acgtggccta tgccggtatg
     2701 ccgaaggccc caaatttccg cttcaagccg gaacgcagcc gcagctggga aatcggctat
     2761 agcttcaatt ttgccccgta ttggagccgg ctgcgtgccg gcgatatgcg cctgacctac
     2821 taccgcaacc gtatccaaaa tgtgatcgaa accacagatt atttccgcac cgtgcaatac
     2881 gaccgcaagg acaccgccgg gctggaatgg cagagccgca tcgacaccgg ccgcttcttt
     2941 gccgcgctcg gtgccaccta ccgcctgaaa cagcagatgt gtgaccgcga taccgctttc
     3001 gattacgacc cttatggtgc caaaggcgtg ccgatctgca tcgaaggcgg ctacggcagt
     3061 acgcgcggct atcaggcctt gcagccgaaa tattcaataa acctggatgc cggggtgcgc
     3121 ctgttgggcg agaaactgga gctcggcctg cgcggcatct accacagccg ggtcaacacc
     3181 aagcaatacg accaactgct gcaaaaggat ttgggcatca tcttcgatac caccggtaag
     3241 ccccaccatt ggcggtcatc gctgacttgg gatgtttatg gccgctaccg gctgcacaaa
     3301 aacctcaacg tcaacctcgg catcaccaac ctgaccaacc gctactatct cgacccgatg
     3361 tccaacgttg ccgcccccgg gccgggccgg acggttacct tcgggctgac tgccaagttc
     3421 tagccgcagg gcggagtggg gttttcaggt agcctgcggg tatggcggga aggctacctg
     3481 aaaacggatt ggatataaca acaaacaatt gaacactccg gacgcacaaa cccaaccggc
     3541 cccgcttatc cgaggtaatg gtttttaccg ttttttccgc cggttcggcg gtaataaaac
     3601 ggtggctttt gtttaactct taattaagga aacgattatg tctatacgta ataaaaccct
     3661 gttggccgtc ttgctgtgcg gcgtttttgg tgtggctgcg gctgctccgg ctggtggttc
     3721 cagccaaagg aaaagccaag atccaaatag tgacccgacg acagttcgcc ccggcacctc
     3781 tgacaagcaa cctttcggtg ccggtaaggc cggtttggca ttcagtatca ataacggtgg
     3841 aagttggtcg aaatccatca atctggatga tggtccggtc aaatatatcc gtgcgaaata
     3901 tcaggcaccg attaacggca acgatcccta tgctaatgtt gatggtacgc gcaatctgca
     3961 atatctgcgc ttaggcgatg tgaaaccggt tatcggctgg ttctacaacc caacgttggg
     4021 tcaggtgtgg tatgaaaacc accacaacaa cactgaagtg tacagtgtgc gccagatagc
     4081 caacccggca atccccgccg cacccaagtt cggcggcctg gtaatcgcca aagtgccggg
     4141 catgggcggc agcaacggca acgtcttctt cggcgaatgg gcgccgcgtg ccggtaaccc
     4201 gcagcaaatc agcaccgacc tgaatatggc ggatggtaaa cgcaccgttt ggtatgtggg
     4261 cgataatccc accggcaaca ccaccggtgt gagaaccgcc acctacaatg tgctgggtat
     4321 caataagcac accccggggc agaacgattt ctataccggt caggtaaccg ccaccttcgg
     4381 ttctggtata accgggacga tggcaggcag aatcagccgc agttccgatc acgtcgattt
     4441 tgatcacgcc aaaatcgata acagaaatgg tacctttgcc gatcccagtc aaggcatgac
     4501 cggccgcttc tacggcaacc aggcggcagc catggccggc tataccacac gtggtaccgg
     4561 taatgtcggc gatgacgtag ctttcggcgg tagcgccacc gatattgaga cccgcaaata
     4621 acagctgcca tccgatttgg tttggcaacg gctaggctgg atttaacccc tgaggagttt
     4681 caagctgccg ttttatgccg actgccaagc catataaatc atccgtccga tacggattgc
     4741 tgctcggttt caggtagccc gtgttcaaca caggctacct gaaatttgat atttgtaaat
     4801 aaacatcgcc tatcccatac ggtttcggcc tatcggacat tttgggacag caattaaaac
     4861 ctgcgttact ttatcttttc ggaaggcaac catgaacaaa ccactcagcc tcgccctctt
     4921 ctgcctgctt ctgcccatca ccgcccacgc cgacaacccc gccgacgaac gccgccgcct
     4981 gctggacgag ggcagccgcc aaacgcagca ataccgcgaa agcggttggc tggacacgga
     5041 acaggcacgc ggggaagtag aggaaaacga cggctatatt tcgataggcg gcgaaatcta
     5101 ccaagtcggc gatacggcgg aagaactgga aagcgcaatt taccacgccc tcaatgcgcg
     5161 gcagtggcac aaggtgcggc agttcgccgc ccgctacgcc aaactgcccc ggcacaaacc
     5221 cgcgctgatt catttggccg atgcgctgca aaaacgggac gaaggggatt tccgcgcggc
     5281 ggggaacagt tttcagacgg ccttggaagc cgaacccgac aacccccgcc tgctgctcga
     5341 agcggggcgg ttttatgccg aagacaacca aaacaaagag tctgccgccg cgtttgagaa
     5401 agttctgaaa acggacattc ccgcagaaac ccgccccatc gtggaaaact acctgtccga
     5461 actgggcaaa cgccgccgct ggcacggcca aatcagcctc ggctacggct ataacagcaa
     5521 tgtaaaccaa ggcaacggca tcaaccaatg cgtgtgggaa attgcgggca tgtgcctgat
     5581 ggagcgcacc ctgcccgcgc caacggattc gaccttctca tcctatagcg cgaccgccga
     5641 aaaaaccgtc ccgctcaaag ggaatcacgg cgtacaggtg cgcggtgtac tgtacggcaa
     5701 ccgctacacg gaaaaagaca aagattcggc ggctatgccg gattacggct atcgcaacgg
     5761 ttcgctgtac gcgggatacg cctatgccga cgcacgctcc tccttttccc tgctgcctta
     5821 tttcgaatac gatttccgca accgccacac ccactaccga gcatggggtg cggatgccga
     5881 ctggtcgcgc acactctccc cgcactggcg cattaactca catgccggag caaaaaagac
     5941 cggatacggc ggacaaagca aaacttattt tgccgatttc aaacaatacg aactcggcgc
     6001 gggggcggaa ttttccatca cgctgaaaag cggcctgctt gtaaatttcg atgccgcacg
     6061 caaagcctat cccgaaaaat cctcttccag caaagaatat acggctcggc tgggcgcgta
     6121 taggcttttt tcgggcggta cttatttaaa cgccgtcctg ctctaccgcc gcagccttta
     6181 tgacgcggca agtttcgtca gcgataacaa acggcggcgc gacaagcaat acatcatgat
     6241 ggctgcggcg ggttttccgc aatggaatat caaaggcgta tatcccgaac tgcgtttcag
     6301 gcgaacaatc gcacacagca acgcggtgta ttaccgctac cgccaaaacg aatggctgtt
     6361 gggttttaaa tatcggtttt gaccagtcgg gtgataaaaa atgccgtctg aaagggcgct
     6421 tcctttcaga cggcatttgt ccgtaatgtt tacagatgag gattcatcag gttctcgggg
     6481 gagaggatgc ggttgagttc ttcttcgctc aacaacccgc gttccagtac gacttcgcgc
     6541 acgcctttgc cggtttgggc gcagattttg ccgaccaagt cgccgttgcg gtggccgatg
     6601 tacggattca gataagtcac cagcccgatg gagttgaaaa cgtaacgttc gcagatttcg
     6661 cggttgaccg taatgccttt gacgcatttg tcggataggt tgactgcggc attgcccaag
     6721 agggaaatgg tttcaaacat acattgggcg atgaccggct ccataacgtt taattgcagt
     6781 tgcccggatt cggcggcgaa ggtaatcgtc gtatcgttgc cgatgacttt gaagcagact
     6841 tggttgacga cttcgggaat cacgggattg actttggcag gcatgatgga agaaccggcc
     6901 tgcaattcgg gcaggttgat ttctttcaaa ccggcgcgcg gaccggaaga gagaaggcgc
     6961 aaatcgttgc agattttaga gagtttgacg gccgtgcgtt tcaatgcgcc gtgtaccatc
     7021 acatatgcac cgcagtcgga ggtcgcttcg atcaggtttt cagtcagttt gcaaggcaag
     7081 ccgctgactt cggagagttt tttgaccacc agttcggcat agcctttggg cgtgttcacg
     7141 cccgtgccga ttgccgttgc gcccaaattg acttccaaga gcagttggcg ggtgcggtca
     7201 aggttgagga tttcctcttc caacaatact tggaaagatt ggaattcctg gcctgccgtc
     7261 atcggtacgg catcttgaag ctgggtgcga cccattttca aaacgtcttt aaacgcttcg
     7321 gctttggcgg caaaggcgtt tttcaatacg gtcagtttgt cgagcaattc gccgatgctg
     7381 taatacacgg caaggcggaa gcccgtggga taggcatcgt tggtggattg gctggcgttg
     7441 acgtgatcca tcggattgac gatgtcgtag cggcctttct catagcccaa ggcttccaat
     7501 gcaaggttgg cgatgacttc gttggtgttc atattgaccg aagttcccgc cccgccctga
     7561 tacacgtcgg acgggaattg gtcgaggcag cggttgttca gcagaacttc gtcgcaagcc
     7621 ttttcaatgg cggcggcgat ttcgggtttt actgcaccca attcgccgtt tgcctgcgcg
     7681 gttgcttttt tcaccatcac catactgcgg acaaactgcg gcacgtcgga aattttttgt
     7741 gtggagattt taaagttttc aatggcgcgc agggtgtgga tgccccaata cacttcggcg
     7801 ggaatctcgc ggtcgcccaa taaatcgtgt tcgatacgga cagtcatgtt tttacctttg
     7861 taagtcggat aattaatatt gaaaaaatgc gccatcggaa agatgccgca gcaggacgaa
     7921 cactataccg
//
LOCUS       DAWXHA010000094         7741 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.094, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000094 DAWXHA010000000
VERSION     DAWXHA010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7741
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.094"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(316..738)
                     /locus_tag="AABD07_001670"
     CDS             complement(316..738)
                     /locus_tag="AABD07_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HFB2356153.1"
                     /translation="MQVTSKWIDGMCFVGTAEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVIGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGAEK"
     gene            complement(856..1527)
                     /locus_tag="AABD07_001671"
     CDS             complement(856..1527)
                     /locus_tag="AABD07_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HFB2356154.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAARLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPAYYKDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVTYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QAAKP"
     gene            complement(1543..2169)
                     /locus_tag="AABD07_001672"
     CDS             complement(1543..2169)
                     /locus_tag="AABD07_001672"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HFB2356155.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2276..3094)
                     /locus_tag="AABD07_001673"
     CDS             complement(2276..3094)
                     /locus_tag="AABD07_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFB2356156.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASAAQGDT
                     SSIGGTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTDAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPATFPLSQVIPGWTEGVRLLKEGGEA
                     TFYIPSNLAYREQGAGEKIGPNATLVFDVKLVKIGAPENAPAKQPDQVDIKKVN"
     gene            complement(3354..3794)
                     /locus_tag="AABD07_001674"
     CDS             complement(3354..3794)
                     /locus_tag="AABD07_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HFB2356157.1"
                     /translation="MPKVTFYTHVDQIPLFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSDTSVLLACGGNLPRIPEGMAVLNLSDGFWNTA
                     SVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3857..5263)
                     /locus_tag="AABD07_001675"
     CDS             complement(3857..5263)
                     /locus_tag="AABD07_001675"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HFB2356158.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCADKAPEHNTAAHALFSALEEGQ
                     NFSDTKIPTDNGLQAVAVVRLEKTDRAALNKAAAEAAKWAQNQETVNVDVHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFSQAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVED
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAIVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLMNYLRNL"
     gene            complement(5266..5448)
                     /locus_tag="AABD07_001676"
     CDS             complement(5266..5448)
                     /locus_tag="AABD07_001676"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356159.1"
                     /translation="MINHKIAVRGAVSGSAQADCPRKVSDGASKNGVQSCQPSSDGLL
                     SERPSENYRQPSQSGE"
     gene            5437..6552
                     /gene="lptF"
                     /locus_tag="AABD07_001677"
     CDS             5437..6552
                     /gene="lptF"
                     /locus_tag="AABD07_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HFB2356160.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAILIAVMQLWVIPWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTISTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6549..7619
                     /gene="lptG"
                     /locus_tag="AABD07_001678"
     CDS             6549..7619
                     /gene="lptG"
                     /locus_tag="AABD07_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HFB2356161.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLI
                     LSQFGFIFAIAAVALGEWVAPTLSQKAENIKAAAINGKISTGHTGLWLKEKNSIINVR
                     GMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSA
                     AAEETWPIAVRRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTQIYAIAWWRKLVYP
                     VAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
BASE COUNT         1661 a         2142 c         2033 g         1905 t
ORIGIN      
        1 ttaattcaat aaattaatat atggcttaaa ataacgggat tcccgccttc cgcccgcccg
       61 caaaatcagg cgggcatcat tttaaaacgc ggcatttaaa atttgaccga aaattgttga
      121 caatccggaa tcaagcctgc acaatacccc gacaagtcca agtattataa aggctgaata
      181 aagaggaaac agcaggcaga tatattcggg aggtgcagtc cgaatatatc tgctttttta
      241 tgcgcctccg gattgcctgc cgcacctttc cccttcagac ggcatcagcc gtttccccat
      301 aatgccgccc gatgcctatt tctccgcccc ggcaatttca aaactgtggg taatctttgc
      361 cgctttgccc aacataatcg aagccgaaca gtatttttcg gcagacatct gaacggcgcg
      421 ctcaatggcc gattctttca aatcatgccc gattaccttg aaatggatgt ggatttcggt
      481 aaacacgcgc ggcgcatcgt ccgcccgttt cgccgtaacc gtcgcacggc agtcagtcac
      541 tttctgacgc tgtttttcgg caatcatcac cacatcgatg ctcgaacagc ccgccacccc
      601 caacagcagc atttccaaag ggctgggccc gcgcttggcc gcgccttctg ccgccgatcc
      661 ctccataacg acgctgtgcc cgccttccgc cgtgccgaca aaacacattc cgtctatcca
      721 ttttgatgta acctgcatgg tgtcattccc gaaaatagcg ttaaaaccgc tttgcatatg
      781 gcgttattgt aaacaatttc aagcggctta tacagaaata tggacaaaac ggcaaaaaac
      841 cgcctgaaaa ccgatttacg gtttggcggc ctgtccgttg atctgcaccg atttgagctt
      901 cagcgtatag gttttgccgt cgtcggtata gccgatttgt gccggaatat tgttcaggga
      961 cggtgcgaag aaatacgtta ccgtatcgtc gccgcgccgc acccgatatt tgacgacttc
     1021 ggtttccacg ccgcctatgc tgtattttcc cgtacccgcc ttattcaggc cgccgacgga
     1081 ataaagtttt ttgccgttgg tgattttcag acccgggggg agtttcgcgt catttgccgc
     1141 caactgccag gcaagcgtga acaaatccat agccttgggg ctttgctcgg ttttgctctc
     1201 gcccgctttg ccgtaggtta cgctgccgtc ggcgaatttg gcttccgcat acagtttgcc
     1261 cctgcgtatg tctttatagt aggcagggtg cagggtattg ccgacaaccg taccgccgga
     1321 ctcgaaacgg atattgtata gcggcacttt aatcgtcgaa acgattttgt aagcattgcc
     1381 gctgcgttca aatgtcatcg tggcgggaat gccgtagctg ccggaatagt gcagcacggc
     1441 ggattggggt agccttgccg catacgcgca cggcagggcg gcggacaaaa tggcggcgga
     1501 aaatatattt ttaaaagtct tcatcatttg ctcccgcccg gtttacgccg tcaggaaacg
     1561 ggcggcatcg gcgttttccg aatttctgac acggtttccc tcgataatca ggcggccggc
     1621 ggcaaaatcg gcaacggctt tcggatagag tttgtgttcg acagccaaaa cccgggcggc
     1681 aacatcgtct gccgtatcgc cgtcaagtat cggcacaatc ccttgcgata caatcgggcc
     1741 gcaatccagc tcggccgtaa cgaaatgaat cgtacagccg gcaacgcggc aacctgcttc
     1801 caaagcgcgt tcgtgcgtat gaagcccggt gaacgagggc aggatggacg gatggatgtt
     1861 catcagcctg ccttcgtaat gggcgcagaa ctcaggggtc agaatccgca taaaacctgc
     1921 caaaaccacc aaatcgggtt gatatgcgtc gattttttcc atcatggccg tatcgaaggc
     1981 aagtcgtgat tcaaagtttt tatgattcag gctgtcggtc gggatgccgc gttcggccgc
     2041 ccattgcaaa ccggcagccg tttcgctgtt gctcaacacg gcggcaatgc ggacgttggg
     2101 aatggcggca ttgacgattg cctgcatatt gctgccgcgt ccggaaatca ggatgacgat
     2161 gtttttcata atggtgcgct tttgaaaggg atgccgtctg aaccgctgtt tggtggcttc
     2221 agacggcatt tgccgtaaaa atgcccgaaa acctgtttcg ggcatggatt cggacttaat
     2281 ttactttttt gatgtcgact tgatccggct gcttggcggg cgcgttttcg ggtgcgccga
     2341 ttttgaccag tttcacgtca aataccaaag tggcgttcgg accgattttt tcgcccgcac
     2401 cctgttcgcg gtaggcaagg ttggacggga tgtagaacgt ggcttcgccg ccttctttca
     2461 gaagccgtac gccttcggtc caacccggaa tcacttggct caaagggaag gtggccgggc
     2521 cgccgttggc tttgctgctg tcgaatacgg taccgtcaat caggcggcct tcgtattcca
     2581 cggtaacgat gtcgtctttt gtcggctgtt tgccttcacc ctgtttggtg attttgtact
     2641 gcagaccgga agcagtggtc ttcacgccgt ctttggcggc attttccttc aggaaggctt
     2701 cgcctttttc tttgttggcc ttcgcatccg ccttgtgttt ttctacggct ttagcctgct
     2761 gctcctgcag gaatttcatc atcacttcct gggcctgctc ttcggtcatt ttgatttctt
     2821 tgccgtcata cactgcctgc atggcatcgg taaagacttt caaatcgatt tccgcgccct
     2881 gttccttcat ttgtttcagg gagcgtccga tgtccacgcc catcgcatag cttgcctgct
     2941 gcatcgtgcc gccgattgaa gaggtgtcgc cctgcgcggc agaagcggcg gcaggttcgg
     3001 atgcagatgc gggggcggct tcttttttgc cgcaggcgga aagcgccaaa gcggcggaaa
     3061 gggtcagtgc gctgattttg aaaatggtgt tcatgatgga tcttcgctgt cgataaagtc
     3121 ggaaaaacgg gattatagcc gagtttgaat gtttcaacac acaggatggc acataaagcg
     3181 tcaatctgtg tgttgccctg ttttggaagg gattgaacct tccaaaataa ggtttgattc
     3241 taccgccccg aaggacagat gtccaagtgg cggggttcaa ccgataagga aattttaatc
     3301 aaatagaatc aagcctgttt aaattttgta aatgcggcat ttcagacggc atttcatgcc
     3361 ttgccctcca tgccgtgatg ttcgatggca aaaccgcttc ggcggtaggc ggtaaagcgt
     3421 tcgcgcgcgt cggcgagatc ttccaggctg ttgccgacga tttccaaaac gcgcgcgggc
     3481 aagaccgaag cggtgttcca aaaaccgtcg gacaggttca aaacggccat gccttcggga
     3541 attcggggca gattgccgcc gcaggcaagc aggacggatg tgtcagacgg catggcttct
     3601 tccgtttccc aaatttcgtg cggaataaaa ctctcggcct cgtattgcca aagcattttg
     3661 tccaattcct gaagccgccc gaacgagtcg gaccacacca gtatcctgcc gccgtctcgg
     3721 atagcgcgcg caatcaaccg acaggtaaaa agggggattt ggtcaacatg ggtataaaag
     3781 gtaactttcg gcatattgtt tgagcatttg acaggatgat gccgtctgaa aagcttcaga
     3841 cggcattgtg gcaaaattaa agattccgca gatagttcat cagcagcggt acggggcggc
     3901 cggtcgcacc tttttccgct ccggatttcc acgccgtacc cgcgatgtca aggtgcgccc
     3961 acgggtagcc ttcggtgaaa taggacagga atgttgcggc ggtaatcgtg cccgcgccgg
     4021 gcgtgccgat attggggatg tcggcaaagt tggatttgag ctggtctttg taggtttcaa
     4081 agagcggcag ttgccacgct ttgtcgtcca cgttgtagga agcggcaagc aggctgtcga
     4141 tcaaatcctg attattgccc atcacgccgc tgacatcgtg ccccaaggcg acgatgcacg
     4201 cgccggtcag ggtggcgaca tcgatgacgg ctttgggttt gaactgctcg gcgtaagtga
     4261 gcgcgtcgca caaaatcaga cggccttcgg catcggtgtt caacacttca atcgtcagcc
     4321 ctttcatact tttcacaaca tcgcccggtt tgtttgccgc gccggaaggc atgttttcac
     4381 aagtggcgac gatggcaatc agattgatcg gcagttgcag tttgacggcg gcgcagaagg
     4441 tgctgatgac ggttgccgcg ccgcacatgt caaacttcat ttcgtccatg ttcaggccgg
     4501 gtttgaggga aatgccgccg gtgtcgaagg taatgccttt gccgaccaat accacaggcg
     4561 cggcttcttt gtcggccgca ccgaaatagc tcagttcaac caaatatggg tcttcgacgc
     4621 tgcctttggc aaccgaccaa aacgaaccca tgttttcttt gatgtagtct ttttcgatga
     4681 ttttggcgtg cgcgcccagt ttctcggctt cggctttggc ggtacgcgcg aggaactcag
     4741 gcgtgcattc gttcggtgcg gcattgccta agtcgcggca gaggctttgt ccgtaaactt
     4801 gtgcttcggc aacgcgcagg gcttctttga cggcggcttc gtgtgcgctg tggaacacgg
     4861 cttgcgaaaa tttggcgggc ttggcttctt ttttgtagcg gtcgaaacga tatgcagcgt
     4921 tgccgaacgc gatggcaaaa gcttcggcaa cggctgctgc ttgcgcctca tcaaaggcgt
     4981 gaacgtccac attgaccgtt tcttgatttt gcgcccattt ggcggcttcg gcggcggctt
     5041 tgttcagcgc ggcgcggtcg gttttttcga ggcggacgac ggcgactgcc tgcaaaccgt
     5101 tgtccgtcgg gattttggtg tcggaaaaat tctgaccctc ttccaaagca gagaagagcg
     5161 catgtgcggc ggtgttgtgc tcgggtgctt tgtcggcaca gacaaataac tgcgcgcctg
     5221 cctgctgttc ctgcaagatt tcggtttttg tgctaaattc cacgtttatt ctcctgattg
     5281 agacggttgt cggtagtttt cagacggcct ttcgctcaaa agaccgtctg aagacggctg
     5341 gcacgattgt accccatttt ttgaagcacc gtctgaaacc ttgcgcggac aatccgcctg
     5401 cgccgaaccg cttaccgccc ccctgaccgc gattttatga tttatcaaag aaacctcatc
     5461 aaagaactct cttttaccgc cgtcggcatt ttcgtcgtcc tcttggcggt gttggtgtcc
     5521 acgcaggcga tcaacctgct tggccgcgca gctgacgggc gtgtcgccat cgatgccgtg
     5581 ttggccttag tcggcttctg ggtcatcggt atgaccccgc ttttgctggt gttgaccgca
     5641 ttcatcagca cgctgaccgt attgacccgc tactggcgcg acagcgaaat gtcggtctgg
     5701 ctatcctgcg gattggcgtt gaaacagtgg atacgccccg tcatgcagtt tgccgtgccg
     5761 tttgccatcc tgattgccgt catgcagctt tgggtgatac cgtgggcgga actgcgcaac
     5821 cgcgaatatg ccgaaatttt gaagcagaag caggaattgt ctttggtgga agccggcgag
     5881 ttcaataact tgggcaagcg caacggcagg gtttatttcg tcgaaacctt tgacaccgaa
     5941 tccggcatca tgaaaaacct gttcctgcgc gaacaggaca aaaacggcgg cgacaacatc
     6001 atcttcgcca aagaaggtaa cttctcgctg aacgacaaca aacgcacgct cgaattgcgc
     6061 cacggctacc gttacagcgg cacgcccgga cgcgccgact acaatcaggt ttccttccaa
     6121 aaactcaacc tgattatcag caccacgccc aaacttatcg accccgtttc ccaccgccgc
     6181 accatttcga ccgcccaact gattggcagc agcaatccgc aacatcaggc agaattgatg
     6241 tggcgcatct cgctgaccgt cagcgtcctc ctgctctgcc tactcgccgt gccgctttcc
     6301 tatttcaacc cgcgcagcgg acatacctac aatatcttga ttgccatcgg tttgttttta
     6361 atttaccaaa acgggctgac cctgcttttt gaagccgtgg aagacggcaa aatccatttt
     6421 tggctcggac tgctgcctat gcacatcatc atgttcgtca tcgcaatcgt acttctgcgc
     6481 gtccgcagta tgcccagcca gcccttctgg caggcggttg gcaaaagtct gacattgaaa
     6541 ggcggaaaat gaacctgatt tcacgttaca tcatccgcca aatggcggtt atggcggttt
     6601 acgcgctcct tgccttcctc gctttgtaca gcttttttga aatcctgtac gaaaccggca
     6661 acctcggcaa aggcagttac ggcatatggg aaatgctggg ctacaccgcc ctcaaaatgc
     6721 ccgcccgcgc ctacgaactc atgcccctcg ccgtcctcat cggcggactg gcctctctca
     6781 gccagcttgc cgccggcagc gaactggccg tcatcaaagc cagcggcatg agcaccaaaa
     6841 agctgctgtt gattctgtct cagttcggtt ttatttttgc tattgccgcc gtcgcgctcg
     6901 gcgaatgggt tgcgcccacg ctgagccaaa aagccgaaaa catcaaagcc gccgccatta
     6961 acggcaaaat cagcaccggc cataccggcc tttggctgaa agaaaaaaac agcattatca
     7021 atgtgcgcgg aatgttgccc gaccatacgc ttttgggcat caaaatttgg gcgcgcaacg
     7081 ataaaaacga attggcagag gcagtggaag ccgattccgc cgttttgaac agcgacggca
     7141 gctggcagtt gaaaaacatc cgccgcagca tcatgggtac agacaaaatc gaaacatccg
     7201 ccgccgccga agaaacttgg ccgattgccg tcagacgcaa cctgatggac gtattgctcg
     7261 tcaagcccga ccaaatgtcc gtcggcgagc tgaccaccta catccgccac ctccaaaaca
     7321 acagccaaaa cacccaaatc tacgccatcg catggtggcg taaactcgtt taccccgtcg
     7381 ccgcatgggt catggcgctc gttgccttcg cctttacgcc gcaaaccacg cgccacggca
     7441 atatgggctt aaaactcttc ggcggcatct gtctcggatt gctgttccac cttgccggca
     7501 ggctcttcgg gtttaccagc caactctacg gcaccccacc cttcctcgcc ggcgcactgc
     7561 ctaccatagc cttcgccttg ctcgctgttt ggctgatacg caaacaggaa aaacgttgaa
     7621 caaatgccgt ccgaacctct cttcagacgg catttgtttt cattgacaca ttcccgcaga
     7681 catatagccg ttccctatta tagtggatta aatttaaacc ggtacggcgt tgcctcgcct
     7741 t
//
LOCUS       DAWXHA010000095         7671 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.095, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000095 DAWXHA010000000
VERSION     DAWXHA010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7671
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.095"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            55..351
                     /locus_tag="AABD07_001679"
     CDS             55..351
                     /locus_tag="AABD07_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356162.1"
                     /translation="MQADLAYAYEHITRDYPEATGANQGKISTVSDYFKNIRTRSVHP
                     RLALGYDFGGWRVFSAPAVAAGLHQSLQYYRSRHCRRFRQIHQFRRITPIPQKP"
     gene            complement(2216..4012)
                     /locus_tag="AABD07_001680"
     CDS             complement(2216..4012)
                     /locus_tag="AABD07_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HFB2356163.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTANEAGVWVDSRYWEQAAKQLSGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLAAKNIRIQHPDDLLDQVWTSRPAIPAETVFIH
                     DHAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDSAVLFTEQCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESARLIEGINPSTFFKSVKSEADIARIREAMEQDGAALCGFFAEFEDIIGKGG
                     SLTEIDVDTMLYRHRSARPGFVSLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVADPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            4471..5724
                     /locus_tag="AABD07_001681"
     CDS             4471..5724
                     /locus_tag="AABD07_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HFB2356164.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QLALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSCVYLWVFLILCIISATINA
                     GAVAIVTAAIVKMAAPSLMFDAGTVAALIMASCLIIVVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRIRPSGYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGREKPGNAELFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDKRHRLTAGMNA
                     LAIVGLLYLAGFAVLFLLNLTGLLA"
     gene            5879..7390
                     /gene="lysS"
                     /locus_tag="AABD07_001682"
     CDS             5879..7390
                     /gene="lysS"
                     /locus_tag="AABD07_001682"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HFB2356165.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLNNIRQQRNAYPNDFKRDS
                     FAADLQAQYGEIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNK
                     GVSQEVLDGFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIVDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDLQTIRDVILFPQMRPE"
BASE COUNT         1671 a         2081 c         2174 g         1745 t
ORIGIN      
        1 gctcgccctg atgcttggca ggcggcgggt gaagaccatg ggcgcggccc gtatgtgcag
       61 gcggatctgg cttacgccta cgagcacatc acccgcgatt atcccgaagc aaccggtgca
      121 aaccaaggca aaataagcac ggtaagcgat tatttcaaaa acatccgcac ccgctccgtc
      181 cacccccgac tcgccctcgg ctacgatttc ggcggctggc gcgtcttttc cgcccccgcc
      241 gttgccgccg gcctccacca atcccttcaa tattaccgat cccgccattg ccgccgattc
      301 cgtcaaatcc atcaattccg ccgaatcacg cctattcccc aaaaaccttg atgcggcggg
      361 ctgaagcccg ccctgcaacc ctctctatgc acccccttgc gagcccgaca ctacgcaaca
      421 tcttgagaac ccatcctgtc aagaataccc gaaccgtccc gatacaccgt aatcctaaaa
      481 cccgccattc ccgcgcaggc gggaatccag tccgttcggt ttcagtcatt tccaaaaatt
      541 gccgtagcgt taagtttcta gattcccact ttcgggggaa tgacgcggtg caggtttccg
      601 tgcggacgga ttcgtcattc ccacacagac aggaatccgg atttgtccgc gcggaaactt
      661 atgcgccgtc attcccgcac aggcgggaat tcaggtctgt cggcatagga acttatcgga
      721 taaaacggtt gccccaaccc tgcgttctag attcccactt tcgtgggaat gacgattcag
      781 gtattcctaa tagcaacccg ccacaaccca cctacgccca tcctacgcat ctgccataca
      841 gccctgttcc ggagcgcgcg gataaggtgc gatgccgccg gcgggcatca tagtcctctc
      901 tccctgtggg agagagctag aaagctgcaa ggcttgtatt ttagaagact aagggatttg
      961 ggaaagattg tcgaaattcg gggagccctc tcccccacag gggagggggc aggttgcggc
     1021 agatttggcg gttgcaggcg gtttgaaaaa cagattggat ttacaaccgt tgatgcaggt
     1081 cgtctgaaaa gcaaaaagca gcctgcacaa cctgattagt ttacaaaacc cttaattcca
     1141 acagcctccc cgtcctctct ccccgtggga gagggctgga gagagggcaa caagccgcaa
     1201 ggcttgtatt ggggcggtta agttgttggg aaaggttgcc gcaacttgga gaatgccgcc
     1261 tccccggccc tcccccacgg gggagggagc ggattgcggc agatttttcg gttgcaggcg
     1321 atttgaaagg caacttagat ttgcagctgt tgtttcaggt cgtctgaaaa ataaaaagca
     1381 gcctgcacaa cctgttttcc ttgcagcaaa cctcaacccc aacagcctcc ccgtcctctc
     1441 tccccgtggg agagggctgg agagagggca acaagccgca aggcttgtat tggggcagtt
     1501 agggtgttgg gaaaggttgc cgcaacttgg aaaatgccct ctccccggcc ctcccccacg
     1561 ggggaggggg caggttgcag cagattttgc ggttgcaggc ggtttgaaaa acagattgga
     1621 tttacagccg ttgatttcag gtcgtctgaa aagtaaaaac agcctgcaca acctattttc
     1681 ttggaatagc gcattaaaaa gagtatgaga atggagacat aaaaaattcc ggcgaatgtc
     1741 cgtgcgccgt tcccgtccgt cattcccgca caggcgggaa tccggatttg tccgcacgga
     1801 aacttatatt tcgtcattcc accaatcccg cccacagccc acttttccgc gtcattcccg
     1861 cgcaggcggg aatccagtcc gttcggtttc ggttatttcc gataaattcc tgctgctttt
     1921 cattcctaga ttcccacttt cgcgggaatg acgggatttc agggtaaaga tggcggcagc
     1981 cggagggctg tgaagagctg ttttcgcagg aatgacgata tgcggatttg ctgttttcat
     2041 ccgctaccga tgccgtctga agcctgtttg gcgtttcaga cggcattggg ttttttgtgc
     2101 atttgccgca aaacggatcg gtgtctgctt gcggcaagac gataacggtg cggaatgttt
     2161 tgggaaacca atgccgtctg aagggctttc agacggcatt tttgtaccgt gccgtttaac
     2221 gcgccagcgg ttcggtgcgt ttgatcagcc acgcttttgc cgcgccttcg gtcagcggct
     2281 cgaggcggcg gcggacttcg gcgtggtagc ggttgaccca gtcgatttcg ccgtcggtca
     2341 tcagggcggt gtccatcagg cgtgtatcga tggggcagag ggtcagggtt tcaaaacaga
     2401 ggaagctgcc gaactcggtt tcctgcgggt cggcgacggc ttggttggcg gcgaggtttt
     2461 caatgcggat gccccatttc cccggacggt agaggccggg ttcgatggag gtaaccatgc
     2521 cttttttcat ggcggtttcg ggcgtggcgg gggcggcgaa ggcgatgcgc tgcgggcctt
     2581 cgtggacgtt gaggaaatag cctacgccgt ggccggtgcc gtgtccgtag tcgcattgcg
     2641 cctgccacag gggtttgcgg caaatcgcgt caatcagcgg cgaggggatg ttttcgggga
     2701 acacggcttc ggcaagcgcg atatgggctt tgagaacgag cgtgttgtcg cgtttttgtt
     2761 ctgctgtggg cgtgccgacg gggacgacgc gggtgatgtc ggtcgtgccg cctttgtatt
     2821 gcgcgccgga gtcgatgagc agcagaccgt tgccgctgat ggtgctgtgg ctttcgggtg
     2881 ttgcgctgta atgcggcagg gcaccgttgg cgttgaagcc tgcgatggtg tcgaaactca
     2941 aggacacaaa acccgggcgc gcgctgcggt ggcggtaaag catcgtatcc acgtcgattt
     3001 cggtcaggct gccgcctttg ccgatgatgt cttcaaactc ggcgaagaag ccgcacaacg
     3061 ccgcgccgtc ttgttccatc gcttcgcgga tgcgggcgat gtcggcttcg gatttgacgg
     3121 atttgaagaa ggtggacggg ttgatgcctt caatcaggcg cgcgctttcg ggcaggcgca
     3181 cgagcgtact gacggcggtt ttgttcggct cgatgagcag cgcgccgccg atttgcgcga
     3241 gtttgtcggc aacttgggcg taaggctcga ccgtgatacc tgcggtttgc agcgcggcgg
     3301 cggcttcggc gttcagacgg cattgttcgg taaacaggac ggcactgtct ttgccgatca
     3361 gcaggaagga cacgaaaaca gggttgaaag gcacgtcgct gccgcgcagg ttggtcagcc
     3421 aagcgatgtc gtcaagcgag gaaaccaagt ggtaatccgc gcctttttcc gccataactg
     3481 cgcgcacgcg ggcgagtttc tcggcggcgg tttcggagac gtaggcgtgg tcgtggatga
     3541 acacggtttc ggcggggata gcgggacggc ttgtccacac ttggtcaagc aggtcgtcgg
     3601 ggtgttggat gcggatgttt ttggcggcga gcgattgcgc caaagtgcgt ttgccggtga
     3661 gcgacaccat atcggaaggg atgccgacgg cagcgttttc gggcaggttt gccgcgagcc
     3721 attcgttgta cggcggcact tgcccgcttt tttgcagctc aatgccgctg ccggaaagct
     3781 gtttggcggc ttgttcccaa tagcggctgt ccacccatac gcccgcttca ttggcggtaa
     3841 cgacgaatgt gccgaccgag ccggtaaagc ctgacaattc gcgccgcgcc tgccaatgct
     3901 cgggcaggta ttcggatagg tgggggtcgg cggaagggat gacgagtgcg tccaagcctt
     3961 gcgccttcat ggcttcgcgc aatgcggaca ggtaattcga tacggtattc ataacagttc
     4021 ctccaatcgg gtttcgcggc ttcagacggc atggacggaa atctgaaatg ccgtctgaaa
     4081 aacataacca tattatcaaa tcgccagcct gctgcaaaac ggacgggctg atcggatggt
     4141 gcgtgtttgc acgaaaaaaa gcgatgtaag gttgtttgtt gtaaaatttc aggcataaaa
     4201 tgtcgtttca tgccttcttt tggaagtaat acggaaaata tagtcaggtt tcagcatgaa
     4261 gttctaatag tgtgtgttgg caggtatttg gattacgtta caatacgcgc tttcatcaaa
     4321 atttccctac cgggcggtat cctgtttttg aagacggtag gatttgggtt tgtttggggt
     4381 caatcccgcc caaattggag caatagatag ggctgtgtcc gaatatgcgg ctctgtatgt
     4441 tgaaacacag ttaaaaatac ggaagacttt atgtccgaac aacatatttc gacttggaaa
     4501 agcaagatca acgcattggg accggggatt atgatggctt cggcggctgt cggcggttcg
     4561 cacctgattg cctcgacgca ggcgggcgcg ctttacggct ggcagctcgc gctcatcatc
     4621 atcctgacca acctcttcaa atacccgttt ttccgcttca gcgcgcatta cactctggac
     4681 acgggcaaga gtctgattga aggttatgcc gagaaaagct gcgtttattt gtgggttttt
     4741 ttgattttgt gcatcatttc cgccaccatt aacgcgggcg cggtcgccat tgtaaccgcc
     4801 gccatcgtca aaatggcggc accctcgctg atgtttgatg ccggcacggt tgccgccttg
     4861 attatggcat cctgcctgat tattgtggta agcggacgct atcgcgcttt ggatcgtgtt
     4921 tccaaaatca tcattgttac tttgagcatc gccacgcttg ccgccgccgg catcgctatg
     4981 tcgcgcggta tgcagatgca gcccgatttt atcgagccga caccgtggac gcttgccggt
     5041 ttgggcttcc tgatcgcgct gatgggctgg atgcccgcgc cgattgagat ttccgccatc
     5101 aattctttgt gggtaaccga aaaacaacgc atccggcctt ccggctaccg cgacggcatt
     5161 ttcgatttca acgtcggtta tatcgccagt gcggttttgg ctttggtttt ccttgcactg
     5221 ggcgcgtttg tgcaatacgg caacggcgaa gcagtgcaga tggcgggcgg caaatatatc
     5281 gggcaattga ttaatatgta tgccgtaacc atcggcggct ggtcgcgccc gctggtggcg
     5341 tttatcgcgt ttgcctgtat gtacggcacg acgattaccg ttgtggacgg ctacgcccgc
     5401 gccattgccg agcccgtgcg cctgctgcgc ggcagggaaa aacccggcaa cgccgaactc
     5461 tttgcctgga atatttgggt ggcgggcagc ggtttggcgg tgattttctg gttcgacggc
     5521 gtaatggcga atctgctcaa atttgcgatg attgccgcct ttgtgtccgc ccctgtgttc
     5581 gcctggctca actaccgcct cgtcaaaggg gacaaacgcc acaggcttac cgccggtatg
     5641 aacgcccttg ccattgtcgg cctgctctac ctggccgggt ttgccgtttt gttcctgctg
     5701 aacctgacgg ggcttttggc atagtttcca aaacacggat gccgtctgca agattttcag
     5761 acggcatcgc cctttcttgg aaaaaaacac cgacatcgcg taaaatacgc gcaaattttg
     5821 tgattcggtc aggtcgtctg aaacagactg cgcctgattt attttttcgg aaaaccctat
     5881 gagcgaacaa aaccatccgc aaaccgagcc gcagttggac gaaaaccaaa tcatcgccct
     5941 gcgccgcgaa aaactgaaca acatccgcca acagcgcaac gcttacccca acgatttcaa
     6001 gcgcgacagc tttgccgccg atttgcaggc gcaatacggc gaaatcggca aagaagaact
     6061 cgacccgcag gccgttcccg ttaaaattgc cggccgcatg atgctcaaac gtcaaatggg
     6121 caaagccagc ttcgccacca ttcaagacgt taccggtcaa atccagcttt atctgaacaa
     6181 caaaggcgtg agccaagaag ttttggacgg cttcaaccac tgggacttgg gcgacatcgt
     6241 cggtgcggaa ggcactttgt tcaaaaccaa ccacggcgaa ctaaccgtgc gtgtgtccga
     6301 catccgcctg ctgtccaaat ccctgcgtcc gctgcccgac aaacacaaag gcttgagcga
     6361 tcaggaaacc aaataccgcc aacgctacgt cgatttgatt gccaatgaag aatcgcgcaa
     6421 tacctttatc aaacgcagcc aaatcatcca atctgtgcgt aattttatgg tgggcgagca
     6481 ttatctcgaa gtcgaaaccc cgatgatgca cccgattccc ggcggcgcga cagcgaaacc
     6541 cttcgttacc caccacaatg ccttggacat tccgctctac ctgcgcatcg cgcccgagct
     6601 gtatctgaaa cgcttggtgg tcggcggctt ggaacgcgtg tttgaaatca accgcagctt
     6661 ccgtaacgag ggcatgtccg tgcgccacaa ccccgaattt acgatgattg aattttacga
     6721 agccttctcc gactacgaac gtatgatgca gatggcggaa gacatcatcc gcaacgcatc
     6781 gcgcacggta aacggcacgg caaacatcac ttacaacggc aaagaagtcg atttggaaag
     6841 cccgttcgaa cgtctgacca tcctcgaagc catcaaaaaa tacaatccgc actacaccga
     6901 cgagcagttg aacgatgcgg aatggctgaa aaaagaaatc gtcaaacacg gcgaaagcct
     6961 gccgccgtcc ccgggcatcg gcagcctgca actcgccctg tttgaaggtt gcgccgaggg
     7021 caaactgtgg aatccgacct ttattgtcga ttacccggtc gaagtttccc cgttggcgcg
     7081 cgcttcggat acgaaacaag gtctgaccga acgcttcgag cttttcgttg tcgggcgcga
     7141 actggcaaac ggctattccg agttgaacga ccccgaagac caagccgaac gcttcaaatc
     7201 gcaagtggcg caaaaagatg cgggcgacga cgaagccatg cactacgatg ccgactacat
     7261 ccgcgcgatg gaattcggtt tgccgccgac cggcggttgc ggcatcggca tcgaccgctt
     7321 agtgatgctg ctgaccgatt tgcaaaccat ccgcgatgtg attctgtttc cgcagatgcg
     7381 tcccgagtaa tcatatattc aattaaaaac aaaatagtac aacactcgac gttgaaggtc
     7441 taaccatggc atactctgcg gacttaagaa acaaagcttt aaaccatagc ggattaacaa
     7501 aaatcaggac aaggcggcgg gccgcaggca gtacaaatgg tacggaaccg atccgcccgg
     7561 tgcttcatta ccttagggaa ccgttccctt tgagccgggg cggggcaacg ccgtaccggt
     7621 ttttgttaat ccgctatatt acggacaatg caaaaacacc ggccaaaccg c
//
LOCUS       DAWXHA010000096         7566 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.096, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000096 DAWXHA010000000
VERSION     DAWXHA010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7566
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.096"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(88..294)
                     /locus_tag="AABD07_001683"
     CDS             complement(88..294)
                     /locus_tag="AABD07_001683"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HFB2356166.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(352..969)
                     /gene="gmk"
                     /locus_tag="AABD07_001684"
     CDS             complement(352..969)
                     /gene="gmk"
                     /locus_tag="AABD07_001684"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HFB2356167.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEANGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSTEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLKGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLEKAEGDLLHIVNACRLKRSRQLGFIADLLENS"
     gene            1130..1696
                     /locus_tag="AABD07_001685"
     CDS             1130..1696
                     /locus_tag="AABD07_001685"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HFB2356168.1"
                     /translation="MLVHPEAMSVGALADKIRKIENWPQKGILFHDITPVLQSAEYFR
                     LLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSY
                     ALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGGEIVEAAAILEF
                     TDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(1742..2530)
                     /locus_tag="AABD07_001686"
     CDS             complement(1742..2530)
                     /locus_tag="AABD07_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HFB2356169.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDTGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            2855..4210
                     /locus_tag="AABD07_001687"
     CDS             2855..4210
                     /locus_tag="AABD07_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HFB2356170.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELGMEEIAEIRQECPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESEAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIHDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLSGHSTAKQSQYVGHVTEIDENGWATIEVKNR
                     FAVGDSLEIIHPSGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPNMQGKEKALIARVLN
                     P"
     gene            4341..4814
                     /locus_tag="AABD07_001688"
     CDS             4341..4814
                     /locus_tag="AABD07_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HFB2356171.1"
                     /translation="MLAACQSGRALKNAHTASAGTPAGESCKVIRGDTAGGGKNIIYR
                     CSNGQAAINAATAAGVLESGIPVSFGGGVPVANGRNLVTRQAANGIGKSDSEACEHAL
                     INAARKFQHTAGKLGGRSVTGFHSYFGKQSLQGGQYDCQAGSFHVRAVMRANVVR"
     gene            complement(5023..5373)
                     /locus_tag="AABD07_001689"
     CDS             complement(5023..5373)
                     /locus_tag="AABD07_001689"
                     /inference="COORDINATES: protein motif:HMM:NF012801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFB2356172.1"
                     /translation="MFSRLTYLGAKKAKDAQYTVYENKGRGTPLQKKVKDYPWLNKSA
                     YVFDMYGFYKPAKNLTLRAGVYNVFNRKYTTWDSLRGLYSYSTTNAVDRDGKGLDRYR
                     ASGRNYAVSLEWKF"
     gene            complement(5358..6320)
                     /locus_tag="AABD07_001690"
     CDS             complement(5358..6320)
                     /locus_tag="AABD07_001690"
                     /inference="COORDINATES: protein motif:HMM:NF012801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFB2356173.1"
                     /translation="MDEIYNRSMDTRFKRFTLRMDSQPLQLGGQHRLSFKTFASRREF
                     ENLNRDDYYFSGQISRTTSSIQHPVKTTNYGFSLSDQIQWNDVFSSRADIRYDHTKMT
                     PQELNAECHACDKTPPAANTYKGWSGFVGLAAQLNQAWHVGYDITSGYRVPNASEVYF
                     TYNHGSGNWLPNPNLKAERSTTHTLSLQGRSEKGTLDANLYQNNYRNFLSEEQKLTTS
                     GDVGCTQMNYYYGMCSNPYSEKPEWQMQNIDKARIRGLELTGRLNVDKIASFVPEGWK
                     LFGSLGYAKSKLSGDNSLLSTQPPKVIAGVDYEARAKNGVCSPA"
     gene            complement(6542..7396)
                     /locus_tag="AABD07_001691"
     CDS             complement(6542..7396)
                     /locus_tag="AABD07_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HFB2356174.1"
                     /translation="MKPLHMLPIAALVGSIFGNPVLAADEAATETTPVKAEIKEVRVK
                     DQLNAPATVERVNLGRIQQEMIRDNKDLVRYSTDVGLSDSGRHQKGFAVRGVEGNRVG
                     VSIDGVSLPDSEENSLYARYGNFNSSRLSIDPELVRNIEIAKGADSFNTGSGALGGGV
                     NYQTLQGHDLLLDDRQFGVMMKNGYSSRNREWTNTLGFGVSNDRVDAALLYSQRRGHE
                     TESAGERGYPVEGAGSGANIRGSARGIPDPSKHKYHNFLGKIAYQINDKHRIGASFNG
                     QQGHNYTI"
BASE COUNT         1871 a         2149 c         1778 g         1768 t
ORIGIN      
        1 acggctttcg ggatgtatgt gttttttcat ttcaaaccgt cggactgcac ggcggcagag
       61 tgtgccggcg tgcgtttccg gcagaattta tttattgcgc gtcaacagtt ccgtaccgat
      121 atgcccggct gcgatttccc ttaaggcggt aacggtcggt ttgttattgc ggacatcgtc
      181 cacaagcggc gtattgccat tttcaagctg gcgggcccga cgggccgcta ccaatgtcag
      241 gtcaaaatgg ttggaaattt ttccggtaca gtcttcggtg gtaatacgtg ccatattatt
      301 tgctttcttt caaaaatatt taaattggga aaccggatat tttcgcggtt tttaggaatt
      361 ttccaacaaa tctgcaataa atcccagttg ccgcgacctt ttcagacggc aggcattcac
      421 aatatgaagc aaatccccct ccgccttctc caggtcgtca ttgaccacga caaagtcgaa
      481 caatacggac tgttcgattt catgccttgc cttcgacagc ctcctttgga taacttcccg
      541 actgtccgtc ccgcgccctt tgaggcgcgc ggcaagcacg tcgaaagaag gcggcaggat
      601 aaagataccg acagcttccg gcagcgcgtt gcgaacctgc gccgcgccct gaacgtcgat
      661 ttccaaaatc acgtcatagc ctgccgccgc caacgcattc acgccctccg tgcttgtgcc
      721 gtaatagttg ccgaatacgt ctgcgtattc caaaaaagcc tcctgcgcga taagcgattc
      781 aaactcttct ttggaaacaa agtgataatg tacgccgttt gcttcgcctt cacgcggcgg
      841 gcgcgtcgta tgcgacacgg aaacgcgcaa accgttatgg tttgccaaca gccgcgacac
      901 cagcgtggtt ttgcccgtgc cggaagcggc cgaaatgata aagatgttgc cttttcgata
      961 agcggacata ttttttacct gtatattttc caaccgattg tatcacaacg gacaccctat
     1021 ttcatatttg ccgatgccca tattttgccg ctattgtttt gattgatttg gcaagcggca
     1081 ggctgacggc tacaatatgg cgttaaaaac atcaaacttg gaacacgcaa tgctggttca
     1141 tcccgaagct atgagtgtcg gcgcgcttgc cgacaaaatc cgcaaaatcg aaaactggcc
     1201 gcaaaaaggc atcttattcc acgacatcac gcccgtcctg caaagtgcgg aatacttccg
     1261 ccttttggtc gatttgctgg tttaccgcta tatggatcag aaaatcgaca tcgttgccgg
     1321 cttggacgcg cgcggcttca ttatcggcgc ggcactcgcc taccagctca acgtcggctt
     1381 cgtccccatc cgcaaaaaag gcaagctgcc ttttgaaacc gtatcgcaaa gctacgcgct
     1441 cgaatacggg gaagctgcgg tggaaatcca caccgatgcc gtcaaacccg gttcgcgcgt
     1501 cctgctggtc gatgatttgg ttgccacggg cggcacaatg cttgccgggc tggaactgat
     1561 ccgcaaactc ggcggggaaa ttgtcgaagc cgccgccatt ttggaattta ccgaccttca
     1621 aggcggcaag aatatccgcg caagtggcgc gcccttattt accctgcttc aaaacgaagg
     1681 ctgcatgaaa ggctgaaaac cgaccctgcc gtctgaaacc ggcagggttg ttattatacg
     1741 ttcaaatcac acccaaatct tgcaagcccc tcaacacgcc gtcttcatca acgccggggc
     1801 aaacatattt cgccgcttct ttcgctgcct gttccccgtt acccattgcc acgccgaacc
     1861 cgacttcaga cagcatttcc acatcgttca aaccgtcgcc gaacgccatc acgtctgcca
     1921 tttccaaacc caatgcttca accacgcttc tgatgccgtc tgttttcgac attcccgcag
     1981 gcagcagatc gaccgcttcc tcgtgccagc gcaccgtttt caagccttcc cgttccacaa
     2041 tatccgacca aagcggcatt tcgttttcct ccgcaaacac cagcatctga tacaccggtt
     2101 tgcttgaaaa ataatcctta tcggcaaaaa aatcgctggc gatatgctgc aaggcgcggc
     2161 acacgcattc cgacagcgcg gacacggcga tcccctctcc gccgacaaac gcataatcca
     2221 tgcccaagcc atccaaatgc gcacaaaccc tgcccatcaa accggtatcc atcggtactt
     2281 cgcgcacagt tttaccgtgc agcagcgcaa actgtccgtt tatcgttacc acggcatcca
     2341 tacccgtttc cgccatcatg tccctgacct tttcgggaat cgtcgccaaa gaccgccccg
     2401 ttgccaacgc cgtcaatata cctttgccgc gcaaagccgc caccgccgtt ttcacggaag
     2461 ggcgcaaggt atccgtatat ttgcggtaca gcgtatcgtc aatgtcgaaa aacacgattt
     2521 tgggattcat catattctct ctcgcactca aactgccgca ttgtatccca agaaggcaaa
     2581 tacttgataa atccttataa atttcccggc aaaattgacc gcgaacacga aaaggcggat
     2641 aatccgccca tcttcaaaca cccttcagac ggcatttgca gcaatgccgt ctgaaacatt
     2701 tttacaaagc atacaaatca tgcttcaaca cacaggacga cacataaagc accgccctat
     2761 atgtcgtcct gattcggaag gggttacgcc cctcccaaat aaagtctgat cctgccgccc
     2821 taaagggcgg ggtttcaacc gaaaaggaaa cacgatgaaa gcacccgaac tcttattgcc
     2881 cgccggcgga ttggaaagaa tgcgcgccgc ctacgattac ggcgcagatg ccgtttacgc
     2941 cggcagcccg cgttactccc tgcgcgcccg caacaacgaa tttgccaaac tcgacgtcct
     3001 cgagcaaggc attaaagaag cgcacgaacg caacaaaaaa ttctttttga ccgtcaacac
     3061 cctgccgcac aattccaaac tcaaaacctt cgttgccgac atggagccgc tgattgccat
     3121 gaaacccgac gcgctgatta tggcggatcc gggtttgatt atgaccgtgc gcgaaaaatg
     3181 gccggaaatg ccgatccatc tgtccgtaca ggcgaacacc accaactact ggggcgtgaa
     3241 attttggcag aacattggtg tcgaacgcat catcctgtca cgcgaattgg gcatggaaga
     3301 aattgccgaa atccgccaag aatgccccga catcgaactc gaagtcttca tccacggcgc
     3361 attgtgcatc gcctactcag gccgctgcct gttgtcgggc tatttcaacc accgcgatcc
     3421 caaccaaggc acctgcacca actcctgccg ttgggactac aaagtccaca acgccacgga
     3481 aagcgaggca ggcgatgccc agcttctgca aggtttcaac tttgaaaaag cccaagaaga
     3541 agccaaccaa aactttgaag gcatcaacgg tcaaaaacgc catccctacg ccgacaaagt
     3601 tttcctgatt gaagaatcca accgcccggg cgagatgatg ccgattatgg aagacgaaca
     3661 cggcacctac atcatgaact ccaaagatct tcgcggtatc gaagtcgtcg aaaaactcgc
     3721 caaaatcggt gtggacagcc tcaaagtcga aggccgtacc aagtctctct actacgtcgc
     3781 ccgcgtcgcc cagtcctacc gcaaagcgat tcacgatgcc gtcgcaggcc gtccgtttga
     3841 ttacagcctg ttgagcgaac tcgaaggcct tgccaaccga ggctacacca gcggcttcct
     3901 cgaacgccac caaactcagg attatcaaaa ctacctcagc ggccattcca ccgccaaaca
     3961 aagccaatac gtcggacacg ttaccgaaat cgacgaaaat ggctgggcga ccatcgaagt
     4021 taaaaaccgc ttcgccgtcg gcgattcgct cgaaatcatc cacccgagcg gcaaccaaac
     4081 catcaaattg gaacaaatga cccgcaaagg ccaacctgtc gatgttgccc cgggcaacgg
     4141 cattcaggtc aaaatcccca atatgcaggg caaagaaaaa gccctcatcg cacgcgtgtt
     4201 gaacccctga gccacaatgc cgtccgaacc ccgttttcag acggcatttt gttgaatctt
     4261 actgtacaat ggcaatgatt tcccacagca aacaaggaca tccgacataa aaaatcctca
     4321 tactctccgc cgccgccctg atgctggcag cctgccaatc cggccgcgcg cttaaaaacg
     4381 cgcacacggc atccgccggg acaccggccg gagaatcatg caaagttatc cgcggagaca
     4441 ccgcaggagg cggcaaaaac atcatttacc gttgcagcaa cggtcaggcg gcaataaatg
     4501 cagccaccgc cgccggcgta ttggaatcag ggattcccgt cagcttcggc ggcggcgtac
     4561 cggttgcaaa cggcaggaat ctagttacac ggcaagcggc aaacggcatt ggcaaatccg
     4621 actccgaggc ctgcgaacac gccctaatca atgccgcccg caaattccag cataccgccg
     4681 gcaaactcgg cgggcgcagt gttaccggct tccacagcta ctttggcaag caatcgctgc
     4741 aaggcggaca atacgactgt caggcaggtt cgttccacgt ccgcgcggtc atgcgcgcca
     4801 atgtcgtccg ttaacatatc ggcaatcaaa aaatgccgtc tgaaacattt ttcagacggc
     4861 atttttaatc ctgcaacatt actccctgcc ctgagttcgg atactgtatc aatataaaac
     4921 cccatcacac agatttacgg taaaaagccg tccgaatgag ttcctgaaaa caattcggac
     4981 agctttaatc cccaacgagg caattaatcc aataatacta gattaaaact tccattccag
     5041 cgatacggcg taattacggc ctgaggcgcg gtagcggtct aagcctttgc catctcggtc
     5101 gaccgcgttg gtggtgctgt agctatacaa accgcgcagg gaatcccaag tggtgtattt
     5161 gcggttgaac acattatata cgcctgcacg caaagtcagg tttttagccg gtttgtagaa
     5221 gccgtacata tcaaacacat aagccgactt gttcagccac gggtaatctt ttaccttttt
     5281 ctgcaaaggc gtaccccggc ccttgttttc ataaacggtg tattgcgcgt ctttggcctt
     5341 tttcgcaccc agataagtca ggcgggagaa cacaccccat ttttcgctcg ggcttcgtag
     5401 tcgacaccgg caatcacttt cggcggctgt gtggacagca ggctgttgtc gcccgacagt
     5461 ttgcttttcg cataacccag cgagccgaac aatttccagc cctcaggaac aaaagacgct
     5521 attttgtcca cattcagacg gcctgtcagc tcaagaccac ggattcgggc cttatcgata
     5581 ttttgcatct gccattccgg tttttcggaa taaggattgc tacacatacc gtagtagtaa
     5641 ttcatctgag tacagccgac atcgccgctg gtggtcagct tctgctcttc agacaagaag
     5701 ttgcggtaat tgttttgata caggttggca tccaaagtac ctttttcgct gcggccttgc
     5761 agagacaggg tgtgggtggt gctgcgctcg gctttcaggt tgggattggg cagccaatta
     5821 cccgaaccgt ggttgtaagt gaaatacact tcggacgcat tggggacacg gtagccggaa
     5881 gtaatgtcgt aaccgacatg ccaagcctga ttcagttgcg ccgccaaacc gacaaatccg
     5941 ctccagcctt tataagtatt ggctgcaggc ggtgttttgt cacaagcatg acactcggca
     6001 ttcaattcct gaggcgtcat tttggtatga tcgtaacgga tatctgcacg gctgctgaac
     6061 acgtcgttcc attggatttg atcagacagt gagaaaccat aattagtggt tttcacaggg
     6121 tgttgaatcg agctggtagt acgggatatc tgtccgctga agtaataatc gtcgcggttt
     6181 aagttttcaa actcacgccg actggcgaaa gttttaaacg acaagcgatg ttggccgccc
     6241 agttgcaacg gttggctgtc catacgcaaa gtaaaacgtt tgaatcgggt gtccatgctg
     6301 cggttgtata tttcgtccaa atccttctga tttatagttg cgcgtccagg tggaataatc
     6361 catcgggaac gagcctttgt tgttaaccgc cgccactttg gttttctgat aatcgaagtc
     6421 cgccttcaaa gacgacaacc aatttgaatc aggcgtccat tcgtaaaaga ggttggcatt
     6481 gcgccgtctg tttacgtcat cggcttcgcg ccaggaagaa gcggtcaggt tataagactc
     6541 ttcaaatcgt gtaattatgc ccctgctggc cgttaaacga tgcgccgatg cggtgcttgt
     6601 cgttgatttg ataagcaatc ttacccaaga agttgtggta tttgtgtttg gacggatcag
     6661 ggataccgcg tgccgaacca cggatattcg ctccgctgcc agcaccctct accggatagc
     6721 cacgctcgcc cgcgctttcg gtctcatgac cgcgacgttg cgaatacagc aaagcggcat
     6781 ccacgcggtc gttgctcaca ccgaaaccga gtgtatttgt ccattcgcgg ttgcggctgc
     6841 tgtaaccgtt tttcatcatc acgccgaatt gcctgtcgtc caacagcaaa tcatggcctt
     6901 gcagggtttg gtaattcacg ccgccaccca atgcgccgct accggtattg aaagagtcag
     6961 cgcccttcgc gatttcgatg ttgcgcacga gttcggggtc gatagacagg cgcgagctgt
     7021 tgaagttgcc ataacgtgca tacagtgagt tttcttccga atcaggcagg ctcacgccgt
     7081 caatgctgac accgacacgg ttgccttcca cgccgcgcac agcaaagcct ttttgatggc
     7141 ggccgctatc gctcaagccg acgtcggtgg agtaacgcac caagtctttg ttgtcgcgta
     7201 tcatttcctg ttgaatgcgg ccgaggttga cacgttccac ggttgcaggc gcattaagct
     7261 ggtctttaac gcgcacttct tttatctctg ctttaacggg tgtggtttcg gttgcagctt
     7321 catccgctgc caagaccgga ttgccgaaaa tactgccgac cagcgcggca ataggaagca
     7381 tgtgtaatgg tttcatatta tcaactcaag atgtaatgga ttgttcatcc atcagttaat
     7441 tcataataaa ttttctgata atcattaata tttaataaga cagcaacccg tacaaataaa
     7501 tctgtgtcgt gtaattaaag gtctctgcaa acatctatgc cgaggccttg tttgtttcat
     7561 tatttt
//
LOCUS       DAWXHA010000097         7418 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.097, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000097 DAWXHA010000000
VERSION     DAWXHA010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7418
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.097"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(658..1122)
                     /locus_tag="AABD07_001692"
     CDS             complement(658..1122)
                     /locus_tag="AABD07_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HFB2356175.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSSTPVTERVCRL
                     EREHYISGYHAHLNPHLLGKPPLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
     gene            1344..2402
                     /gene="alr"
                     /locus_tag="AABD07_001693"
     CDS             1344..2402
                     /gene="alr"
                     /locus_tag="AABD07_001693"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HFB2356176.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTKGLEGEESLANSAAILNIPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRISMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(2944..4299)
                     /locus_tag="AABD07_001694"
     CDS             complement(2944..4299)
                     /locus_tag="AABD07_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HFB2356177.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKHLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSVPEAMKTTDIVCSSINIGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDAVSLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPAKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(4314..4586)
                     /locus_tag="AABD07_001695"
     CDS             complement(4314..4586)
                     /locus_tag="AABD07_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HFB2356178.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEILDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(4711..5448)
                     /locus_tag="AABD07_001696"
     CDS             complement(4711..5448)
                     /locus_tag="AABD07_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HFB2356179.1"
                     /translation="MKKLSRIVFSIVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAAGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGSIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(5449..5574)
                     /locus_tag="AABD07_001697"
                     /pseudo
     CDS             complement(5449..5574)
                     /locus_tag="AABD07_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212671.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
     gene            complement(5586..6485)
                     /gene="prmB"
                     /locus_tag="AABD07_001698"
     CDS             complement(5586..6485)
                     /gene="prmB"
                     /locus_tag="AABD07_001698"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFB2356180.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAVYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIVPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            complement(6584..6781)
                     /locus_tag="AABD07_001699"
     CDS             complement(6584..6781)
                     /locus_tag="AABD07_001699"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356181.1"
                     /translation="MGERLVQTDYAHPAVGIADIGHLVVFCGYPLLALNKPRFFPVYQ
                     VAHTVRHRRFRSGNGLRAAFM"
     gene            6691..7302
                     /locus_tag="AABD07_001700"
     CDS             6691..7302
                     /locus_tag="AABD07_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356182.1"
                     /translation="MDNRKRRQGVRCLQCQRRDGRNRFARAFLPRCVDDTGASKWQVR
                     GCSRCRADRQAGERQPRDGNGRWTAGEVVSVSGGELGEFAETKELRKAAMQYARDNFV
                     GKSYVNESSGHELKVTWQGVKHAASKSNSIELSLMVALDKVLMNAKYEGSFPNKLGRD
                     HIIAVHKYSTGVRFGNKVLKIRIIAREKFDGIKHYDHFILKDK"
BASE COUNT         1987 a         1807 c         1691 g         1933 t
ORIGIN      
        1 cgttgcctcg ccttgccgta ctatttgtac tgtctgcggc ttcgccgcct tgtcctgatt
       61 tttgttaatc cactataaag tctgattcta ccgccctaaa gggcagggtt tcaaccgaaa
      121 aggaaacacg atgaaagcat atgatttttt gaataatcgg attgacgggt ttttgaggga
      181 atttgttacc ggatagccat cgggcaagtt ttttgcaaaa tttgaatcgg tcgggtaaat
      241 tttcaaaaaa taattgacag cagataagaa acggcggata attaccgccg ttgagttgct
      301 tgatgcagct tgatttttct cctctacttc tcctttgtag acttggcaca cattcaaccg
      361 gatgtgtgca ttttttatct ccgctttttt tgaaatttaa ttacttttat tgtttgaaat
      421 tctattcttt aagaaattta acaagaaaaa cgcttgcttt ttgaccggaa aagctgcata
      481 attcgttccg ttagctggtt cgagtagtca gttaatagtt tctcctctat ttctcctttg
      541 tagacttggc acacattcta ttgaatgtgt gcatttttta tctgaagcaa caagcctctg
      601 tgcgtgatgt tgttatgttt catttagatg tcaaaccgca tacccggtct gaaatattca
      661 atccaaatcc aaaaccggat tttctttgac ttcctccatc acaacataac tcctactctc
      721 cgaagcggca ggcagttgca ataggatatt gccgagcata tcccgatagg cagacatatc
      781 gggcaaacgt actttaatca ggtagtcgta ttcgcccgac accagatggc actccataat
      841 ttgcggaatt ttcagcactt cttttttgaa atcttcgaaa atattgcccg atttggattg
      901 cagcttcagc tcgacaaaaa ccaatggcgg tttgcccaac agatggggat tgagatgggc
      961 gtgatagccg gaaatataat gttcccgctc caaacggcat accctctctg taacgggcgt
     1021 gctggacaac cctaccttct cggcaagctc cgtcatcggg atacgggcat tttgctgaag
     1081 aattttgagg atgcggaaat cgattttatc tagttctttc atttggatta ccttgtattt
     1141 attattgatt ttaacaaata gagtataaat ttgggaaagc aattatatca ggaaaagcaa
     1201 accgccttcc tacctgaaaa ctgctgctct ggcttgaaga cacaaggttc tttaatattt
     1261 taaaagcctt gccgttggat tataattccc caattgattt cttaattttg ctaataaaca
     1321 cttgtttggt aaggaatgaa tttatgcggc ctttgaacgt gcagatcagg ttgggcaacc
     1381 ttaggcacaa ttatcggatt ttgaaggaaa tgcacggagg caagctgttg gcggtagtga
     1441 aggccgacgc atacggacac ggtgcggtca gatgtgcttt cgcgctggca gacttggcag
     1501 acggctttgc cgtggcgaca atcgacgagg gaatcaggct gcgggagagc ggcattaccc
     1561 atccgattgt ccttttagaa ggcgtatttg aagcatcaga gtacgaagcg gtcgaacaat
     1621 actcgctttg gccggcagtc ggaaaccaat ggcagcttga ggctttgctt tcccgccatt
     1681 ggaaaaaacc tgtcaaggtc tggttgaaaa tggattcggg aatgcaccgt accggatttt
     1741 tccctcatga ttacgcttcg gcatatgcgg cattgaaaca gtcggaatat gtggacagta
     1801 ttgtcaagtt ctcgcatttc tcctgtgcgg acgaacctga aagcggtatg acggaaatac
     1861 agatggaagc attcgatttg ggtacgaaag ggctggaagg cgaagaaagc cttgccaatt
     1921 cggcagctat tttgaatatc cccgaagcac gcagggattg ggggcgcgcg ggcttggcgt
     1981 tatacggcat ttccccgttc ggaggcagcg atgacaggct gaaacccgtg atgaggcttt
     2041 caacccgtat tttcggcgaa cgcgttttac agccgcactc ccctatcggt tatggcgcaa
     2101 cattttatac cagtaaatct acgcgcgtcg gtctgattgc ctgcggttat gcggacggtt
     2161 atccgcgccg cgctccaagc aattcccccg tcgccgtcga cggtaaattg acccgggtca
     2221 tcggcaggat ctctatggat atgatgacta tcgagctgga cgcttcgcaa gaaggtttgg
     2281 gacacgaggt cgaactgtgg ggcgatacgg tcaatatcaa taccgttgcc gaagcggccg
     2341 gaaccatccc ttacgaattg atgtgcaata tcaaacgtgc aaaattcact tatatcgagt
     2401 aatcgagtcc aaacgaaaat cccgtctgaa gcttttcaga cggcataaat gcgttttgac
     2461 aaaatcagta aaagacattg ccaaatagaa aatactgata atgcccacaa tctgaaaccc
     2521 catccttccc gcaaaaacgg aaaatcaaaa tcagaaacct aaaatttcgt cattcccgcg
     2581 caggcgggaa tccggttttt tgagtttccg tcatttctga taaattctcg tcgtttttca
     2641 tttctagatt cccgcatgcg cgggaatgac aaaattaaag tttcagaatt tatttgaaca
     2701 acaaactaga ttcccgcttt cgtggggatg acggcggata ggttttgttg tttcggataa
     2761 attcctgttg ttttttggtt tccagattcc cacctttaaa agaatgacgt aagaaagcag
     2821 aaataagaac acggggattt tttaaatttg caatattctt ttctaaagac attttaccca
     2881 atgcccataa acaaaaatgc cgcctgaagc ctttcagacg gcattttccc atcaaaaccg
     2941 caatcagttt ttcatcgatt gaaccggtgc gggaatcctg ccgccccggt tgacgaacac
     3001 ttcgcacgaa ccttcttttg ccggcattac aggcgcgtag cccaacagac cgccgaactc
     3061 gacgctgtcg ccgacggttt tgcccgttac cggaataatg cgcacggcgg tggttttgct
     3121 gttgatcatg ccgatggcgg cttcgtcggc gatgatgccg gaaatggtgt gcgcgggcgt
     3181 gtcgccggga acggcaatca tgtccaaacc aacggagcag acggcggtca tggcttcgag
     3241 tttgtccagc gtcaacacgc ctgcctcggc ggcggcaatc ataccttcgt cttcggaaac
     3301 ggggataaac gcgccgctca aaccgccgac cgcgctggaa gccatcatgc cgcccttttt
     3361 cacggcatcg ttcagcaatg ccaaagctgc tgttgtgccg tgcgtaccgc agacgctcaa
     3421 gcccatttct tcaagaatgc gcgccaccga gtcgccgacg gcgggggtcg gtgccagcga
     3481 caaatcgaga atgccgaacg ggatattcag catttttgag gcttcgcggc cgatgagttc
     3541 gcccacgcgg gtgattttga aagcggtttt cttcacgact tcggcgacct cggtcaggct
     3601 gaccgcgtcc gaattttcca gcgcggcttt gaccacgcct ggaccggata cgccgacatt
     3661 aatcacagca tccgcttcgc ccgagccgtg gaacgcaccc gccataaacg gattgtcttc
     3721 caccgcgttg cagaacacga cgattttggc gcagccgaaa ccttcgggcg tgatttcagc
     3781 cgtgcgtttg atggtttcgc ctgccagctt gaccgcatcc atattgatac cggcacgcgt
     3841 gctgccgata ttgatggagc tgcacacgat atcggtagtt ttcatcgctt cgggaacgga
     3901 acggatcaac acctcatccg aaggcgacat acctttttgc accagcgcgg aaaagccgcc
     3961 gataaaggac acgccgatgg ctttggctgc cttgtccaaa gtctgcgcca cgctgacata
     4021 actgtcggct ttggtcgccg ccgcgatttg ggcaatcggc gtaacggaaa tgcgctgatt
     4081 cacaatcggc acgccgtatt tggcggaaag gtgtttcgcc gttgccacca agtctttgcc
     4141 gaccgtggtg attttgttgt aaatgttttg gtttaacacg tcgatgtcgg tgctgatgca
     4201 gtcgtgcaaa tcaatgccga tggtaatggt gcggacatca aaattctggt cggcaaccat
     4261 tttgacggtt tctaaaattt cgccggattg gatactcatc acattcctcc gactcaaatg
     4321 cggtgcatcg cttggaagat ttcttcgttt tgcatacgga tgtcaagcgc gagttttttg
     4381 ctctcttccg caaacaaatc caaaatctcc tgccgcgatt tagggcattt cgaggtatcc
     4441 accaagataa tcatagtaaa aaaatcgtcc atcagctgtt ggctgatatt gaggatgttg
     4501 attcggtttt ccgccaaaat tttggaaaca tcgtacacga tgccgacgcg gtctttaccg
     4561 atgacggtga tgactgaatt gttcacaggc ttactccttg cagatatccg ttaaaatccg
     4621 aaattatacc accgtcggat tttgaagaat attgtcaaca atatatacat acaaaatgcc
     4681 gtctgaaact atttcagaca gcatcaagat tcagggttcg attaaataac catccttatc
     4741 ccattgggtt ttcctgacca acttgtcatc ctgataaaca gcctcgctct ttttagaacc
     4801 atcttcatac cactccaaaa ccaccccgtt gcgtttatgg tggcggatag acagttccga
     4861 aagtaatcgg ccgctttcat cccaagtcag aattttggca ggctcatcgt tgaccataac
     4921 catttccgtc ttgatacttc cgtcggcata ccattgcttc catacgccgt tcgccttatt
     4981 ttgcttaaac tggatttcgc tttccttgcc gccgttacgg taataacggt atcccgtacc
     5041 ctcactcaag ccatttttat aaggcataac cgcagatttt ttaccgttcg gataccagtt
     5101 gacccattcc ccgtccggct tacccttgct gaagcccccc gccatttttt tctgaccatt
     5161 aaaatgccac aaaatcaaca taccgttttg cagggtaggc acaaaagatt tgatttgcgt
     5221 tgaagcaacg atataaggtt cggaatattt cttcatcgac ggataataaa aatcctgcgc
     5281 gtgtgcgata cccgccgcca cactatattg cctgatataa gcggcagaag acatcgtcgc
     5341 cgtcagtttc ccgttctgat taaaataaac agaataggtc tgcgccggca aagcggccga
     5401 aaaacccaac agtacgattg aaaatacaat ccgagataat ttcttcatta tgatagcgat
     5461 ataaaaaaca attaacttat aaacaatatg gtaaggattt ctcaaccaag cgtcaaaccc
     5521 gaaacaatgt atcgtaaaaa tgccgtctga aaacaaatcg tcttcagacg gcatttccct
     5581 ccaactcact cttcgcccaa taactgctcg cgcgtcaaga ggaaaacaaa accgtcgccc
     5641 ccgctggttt ccaaccaagt aaaaggcaac tccggatacg ctgcttccaa tacatccctg
     5701 ttatgcccga tttccaccag caatacacct ttaggattca gaaactttgc cgcattcaga
     5761 agaatctgcc tggtggcatc caacccgtcc gccccgctgc ccaacgccaa ttccggttcg
     5821 tgcaaatatt cctcaggcaa agccccaacc gactctgcat ccacataagg cggattggaa
     5881 acaatcaaat cataagtgcc ttccagtccc tcaaacaaat cggtatgaat aagctgaata
     5941 cgctcttcca gaccataatc ttcaatattg atccctgcaa cttccaaagc atccaaactc
     6001 acatcaaccg catcaatttg ggcatcagga taatggtgcg ccatctgaat ggcaaggcaa
     6061 ccgcttccgg tgcaaagatc caaagcatta tgcaccagct catcgtattc tatccaaggt
     6121 cgaagtccgt cacccagcaa ttcataaata aaagagcgcg gtacaatcac gcgttcatct
     6181 acataaaaat caaactcccc ctgccaggcc tggtgtgtca aataagcggc aggaatgtgt
     6241 tcgacagcac gacgctcaat aaccgccagc acttcctctt tttcagcttc caagagtttt
     6301 gcatcaagat atggggcaag catatccaaa ggcaaattca aagtatgcag aatcaaataa
     6361 accgcttcat catgcgcatt atctgttcca tgaccaaaaa agagccctgc ctcattaaaa
     6421 cggctgactg caaaacgtaa aacatcacgg atagtcgtca attcttgtgc ggcctgatta
     6481 aacataatat gaaccattct gcgtatagat gcttttaatt ataacagaaa caacaagcaa
     6541 accttttcat atcgccaaat aaccactcaa tctacccata caactacata aatgccgcgc
     6601 gaagaccatt gcccgaacgg aaacggcgat ggcggacggt atgggcaacc tgatagactg
     6661 ggaagaaacg gggcttgttg agggcaagca gtggataacc gcaaaagacg acaaggtgtc
     6721 cgatgtctgc aatgccaacg gcgggatggg cgtaatcggt ttgcacgagc ctttctccca
     6781 cggtgcgttg acgataccgg agcatccaaa tggcaggtgc gcggttgttc ccgttgtcgg
     6841 gcggacaggc aagctggcga aaggcagccg cgcgatggaa acgggcgatg gacggcaggt
     6901 gaggttgttt ccgtatcggg cggcgaattg ggggaatttg ctgaaacaaa ggagcttcgt
     6961 aaagcggcta tgcagtatgc gcgtgataac tttgtcggca aaagctatgt caatgaaagc
     7021 agcgggcatg aactgaaggt aacttggcaa ggtgtgaaac acgctgcgtc aaaatcgaac
     7081 agcatcgaac tttcccttat ggtcgcgctt gataaagttt tgatgaatgc aaaatatgaa
     7141 ggaagttttc ctaacaaatt agggagggat catattattg cggtacacaa atactcaacc
     7201 ggtgtcagat ttggcaataa agtcttaaaa atcaggataa tagcccgtga gaaatttgat
     7261 gggataaaac attacgatca ttttattttg aaagacaaat gaaaaaaccc tgtccagtat
     7321 atctgggata gcttatggaa gcatttaacc cagcctcgga taaggcttta aatccatcat
     7381 gccatttata cggtaaaaac aagggtctgt accagatt
//
LOCUS       DAWXHA010000098         7164 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.098, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000098 DAWXHA010000000
VERSION     DAWXHA010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7164
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.098"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(164..2440)
                     /gene="metE"
                     /locus_tag="AABD07_001701"
     CDS             complement(164..2440)
                     /gene="metE"
                     /locus_tag="AABD07_001701"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HFB2356183.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLDVAKDLRE
                     KNWKHQAAANADYVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLPLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQTLGLKAKPTVVGPL
                     TFLWVGKEKGSVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLNKVSAKILLGTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFAGY
                     DKVLSAGVIDGRNIWRANLNKVLETVGPLQAKLGERLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPVNADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSASDYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQNLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLAAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTRKLRAELAK"
     gene            complement(2576..3457)
                     /gene="metF"
                     /locus_tag="AABD07_001702"
     CDS             complement(2576..3457)
                     /gene="metF"
                     /locus_tag="AABD07_001702"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HFB2356184.1"
                     /translation="MQNYAKEINALNNSLSDLKGNINVSFEFFPPKNEQMETMLWDSI
                     HRLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASHDELRQIA
                     KDYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKS
                     AQADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQ
                     LGKMAQVTNVKIPKWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTL
                     NRSELTYAICHILGARP"
     gene            3648..3923
                     /locus_tag="AABD07_001703"
     CDS             3648..3923
                     /locus_tag="AABD07_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HFB2356185.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAGTHGKTMVWTDGKE
                     YPLFSLDTSSSSHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            3923..4048
                     /gene="rpmJ"
                     /locus_tag="AABD07_001704"
     CDS             3923..4048
                     /gene="rpmJ"
                     /locus_tag="AABD07_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HFB2356186.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKSRQR"
     gene            complement(4085..4351)
                     /locus_tag="AABD07_001705"
     CDS             complement(4085..4351)
                     /locus_tag="AABD07_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356187.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRRQKRVLREVAEISAWVLLG
                     AAAATLFWYLFMLYFKHIPDSYRRKMPSETHFSVSDGIFEKGLR"
     gene            4494..5633
                     /locus_tag="AABD07_001706"
     CDS             4494..5633
                     /locus_tag="AABD07_001706"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HFB2356188.1"
                     /translation="MSQNTSVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPMVTVKDWVKSQAALADYLGIEQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSHNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYSVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVTAYMNNVDKDCRL"
     gene            5630..6211
                     /gene="metW"
                     /locus_tag="AABD07_001707"
     CDS             5630..6211
                     /gene="metW"
                     /locus_tag="AABD07_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HFB2356189.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALAEHKKCSGYG
                     IEIDTDNVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RLAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            6328..6519
                     /locus_tag="AABD07_001708"
     CDS             6328..6519
                     /locus_tag="AABD07_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356190.1"
                     /translation="MKNKTSSLPLWLAAIMLAARSPSKEDKTKENGASAASSSASQSD
                     LQPAASAPDNVKQAESAPL"
     gene            6724..>7164
                     /locus_tag="AABD07_001709"
     CDS             6724..>7164
                     /locus_tag="AABD07_001709"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HFB2356191.1"
                     /translation="MLAIEDLRYGTRTISRQAQDAIMEQERRLREATLMLTQGSQKTR
                     GQGEEPKRARYFEVSATSAYLNRHNNGLGGNFQYIGQLPGYLKMHGEMLENQSLFRLS
                     NRERNPDKPFLDIHFDENGKITRIVVYEKNIYSRLNLNQDKATKP"
BASE COUNT         1741 a         1786 c         1884 g         1753 t
ORIGIN      
        1 tcaaatacaa ctccgatttg cctgttcccc acatataaag ccgaattaga gaaaaacaag
       61 ctgcaatgaa aagattttcc ggcaactgct cccctgcgcc gcaactcagg acaaaatgcc
      121 gtctgaaagg ctttcagacg gcatttgttc atacggtctc ggcttatttc gccaattcgg
      181 cacgcagttt gcgggttacg ttcatcatta cttgaagctg ttccagagtt tctttccagc
      241 cgcgtgtttt caggccgcag tccgggttaa cccacagacg ctcaaccgga acaacctcaa
      301 tggctttgcg caacaggtgt tccacttcgg cttctgtcgg tacgcgcggg ctgtggatgt
      361 cgtaaacgcc cgggccgatg tcgttcgggt atttgaattc gccgaacgca gccaagagtt
      421 ccatgtcgga acgtgaagtc tcaatggtga tcacgtccgc atccattgca gcaatcgcag
      481 gcaggatgtc gttgaactca gagtagcaca tatgagtgtg gatttgagtg ctgtcttcgc
      541 aacctgcaga ggatagacgg aaggattcgc ccgcccagtt caggtaggca tcccaatcgg
      601 cacgtttcaa aggaagacct tcgcggatgg caggttcgtc aatttggatg actttaatgc
      661 cggctttttc cagatccaat acttcgtcgt tcagagccag tgcgatttgt ttgcacacgg
      721 tagcgcgcgg aatatcgttg cggacgaaag accattgcag aatggttaca ggaccggtca
      781 acataccttt catcgggcgt ttggtcaggt tttgtgcgta agtagaccaa gcgacagtca
      841 tagcttcagg acggcttacg tcaccgaaga tgataggtgg tttaacgcag cgtgagccgt
      901 agctttgcac ccagccgtat tgggtgaatg caaaaccgct caacagttcg ccgaagtatt
      961 cgaccatgtc gttacgctcg gcttcgccgt gcaccagtac gtccaagtcc agtttttctt
     1021 gctcttcaac caccaaggcg atttcttttt tcattgcggc ttcgtaatcg gaggcagaca
     1081 gttcgccttt tttgaaggct gcgcgtgctt ggcggatttc ggtagtttgc gggaaagaac
     1141 caatgttggt cgtcggcagc agaggcaggt tcaaccatgc ttgttgcgct ttgatacggt
     1201 cggcaaacgg tgatttgcgt tggtctgcgt tgacaggcag gtcggccaag cgtttggcaa
     1261 cgtctgcacg gtggatttca ctgctgttgg cacgggagtc ggcagcagct tggctggcgg
     1321 ccagttcttc ggcaacagaa tcacggcctt cattcaatgc ggctttcaga acacgcaatt
     1381 cttgggtttt ttgcagagtg aatgccaacc aagagtacag gtcgggtttg ttggctttca
     1441 gtttttcttc gactgacaag tcaaacggag tgtgcagcag cgagcaagag ctggaaatcc
     1501 acaaacgctc gcccagtttg gcttgcagag gcccgacggt ttccaaaact ttgttcaggt
     1561 tggcgcgcca aatgttgcgg ccgtcaatca cgccggcaga caggactttg tcgtagccgg
     1621 cgaacgcgtc cagttgctcg ggtgcgcgta ccaagtcgat gtgcaggccg tcaacaggca
     1681 gggatttcaa caatgcggcg tgttcggcaa cagaaccgaa gtaagtgccc aacaggattt
     1741 tggcgcttac tttgttcaaa gtagcgtaaa cgtctttgta tgcttctacc cattctttag
     1801 gcagatcgac agccaaagca ggctcgtcga tttgaatcca ctcggcaccg gcttcaacca
     1861 aagcagtcag gatttcaacg taaacaggca acagtttagg caacaggctc agacggtcga
     1921 attcaacgga gcctttttct ttacccaccc acaggaaagt caaaggaccg acaacggtcg
     1981 gtttggcttt caagcccaaa gtttgggctt cttgcagttg ttgaacgtag tgtttggcgt
     2041 tggctttgaa ttcggtatcg gcatggaatt caggcaccag gtagtggtag ttggtgtcga
     2101 accatttggt catttcgatg gcgaattggt ctttgttgcc gcgcgccagt tggaagaatt
     2161 gttccaaagg caggttttgg ctatcgaagc cgaaacgggc gggaatcgcg ccggtggcaa
     2221 cttgcaggtc gaggatgtga tcgtagaaag tgaaatcacc tacagcaacg taatcagcgt
     2281 tggcagcagc ttggtgtttc cagtttttct cgcgcaggtc tttggcaacg tcgagcagct
     2341 cttgttcact gatctctttg cgccagtatt tttcttgggc gaatttcaat tcacggaagg
     2401 cgccgacacg cgggaagcct gagaaatgta atgttgtcat gttgaactct ccagttggat
     2461 tttgtaagga ccggttcaat ccgaatcggc cggtattgta aatcagaatg gctcggatag
     2521 ggcggcgttt tgcttttcag acggcctcgg atgctgtctg aagccgtttt cggctttaag
     2581 ggcgcgcgcc taaaatatgg cagatggcgt aagtcagctc gctgcggttg agcgtgtaga
     2641 agtggaaatc tttcacgcct tcgcgggaca ggactttaac catatcgatg gcgatactgg
     2701 cggcgacgag gttgcgcgtg ccttggtcgt cgtccaagcc ttcatacatt tgcgacagcc
     2761 atttcgggat tttgacgttg gttacttgtg ccattttgcc gagttgcttg aagttggtaa
     2821 caggcaggat gccgggaacg atttcgacgt cgatgcccaa catcacgcag cggtcgcgga
     2881 agcgcaggta gcgttccaca tcgaagaaga attgggtgat gacgtggttc gcgcccgcat
     2941 cgattttgcg cttcagatta atcaggtcgg cttgtgcgga tttcgcttcg ggatgtactt
     3001 cggggtatgc tgctacagag atgtcgaagt cggcgacgga gcgtaatagc ttaaccaagt
     3061 cttcggcgta aaacggtttt ttctcataac cggccggctc gtcgccacgc agggcaacga
     3121 tgcggcggat accgctgtcc caatagtctt tggcgatttg gcgcaattcg tcgtgggatg
     3181 catcgatgcc ggtcaggtgc ggagctgctt ccaaaccggt ttcctgtttg atgcgtttga
     3241 cgatgccgtg cgtgcggtcg cgttcgccgg agtttgcgcc gtaagttacg gatacgaact
     3301 tgggatgcag ggtttgcaga cggtggatgg aatcccacag catcgtttcc atttgttcgt
     3361 ttttcggcgg gaaaaattca aacgaaacgt tgatgttgcc tttcaaatcg gaaaggctgt
     3421 tgtttaacgc attgatttct tttgcataat tctgcatacc ttcgttatct tttacatgat
     3481 gtttcaggcg gtatgataag gttgcaccga atatgagtca atttcaaaat tttcaggttt
     3541 atgatgaaaa tttttaatat ttagcaaaaa ctatacgctt ttcttgtaca atccttctaa
     3601 attatgataa agtttgttat gttataacac ttcaatcaag gcaatatatg aaaccgaata
     3661 ttcatcctga caattatcga accgtccttt ttttcgacag cagtgccaat gaaggctggc
     3721 tgattcgttc ttgcgccgga acgcacggaa aaacaatggt ttggacagac ggcaaagaat
     3781 atccgctctt ttccttagat acttcctctt cctcacatcc cgtctatacc ggcaaacagc
     3841 gtaacgtcaa taccgaaggc cgtgccagca agttcaacca acgtttccaa tccgtcatgt
     3901 catcgtttag aaaggacaaa taatgcaggt tctgtcttcg ctcaaaaccg ccaaacaacg
     3961 ccaccgcgac tgccaaatcg tcagacgcag gggcaaagtg tacgtcatct gcaaaagcaa
     4021 tccgcgtttt aaatcgcgcc aacgctgacc ccctgccctt cctgcttcgg ttgtaaagcc
     4081 cctcctaccg caagcccttt tcaaatatgc cgtctgaaac agaaaaatgc gtttcagacg
     4141 gcattttccg tcgatacgaa tccggaatgt gtttgaaata cagcataaac agataccaaa
     4201 acagcgtcgc ggcggctgca ccgagcagta cccatgcgct gatttcggcg acttcgcgca
     4261 ggacacgttt ctgcctgcgg ctaaagaggc ggttgataat cagcgcggca agtgcgaaaa
     4321 agaaaaaaat acggaaaagt ctgcctatca tgtcgggaag cgaaaagtat ggttcgggcg
     4381 cggcggcatg ggaaaggatg tttcagcgcg tcaggctgct tgtccgaccg tgtcaaaaag
     4441 tcatgccgtt tgcgatataa taacgctttt cgccgcattt gttggaacag gatatgagtc
     4501 aaaatacctc ggtgggcatt gtaacgcccc aaaaaattcc gtttgaaatg ccgctggttt
     4561 tggaaaacgg taaaactttg ccgcgtttcg atctgatgat tgaaacctac ggcgagctga
     4621 atgctgaaaa aaacaatgcg gttttaatct gccacgcgct gtcgggcaac catcacgttg
     4681 cgggcaggca ttcggcggag gataaatata cgggctggtg ggacaatatg gtcggtcccg
     4741 gaaaaccgat tgatacggaa cgttttttcg tggtcgggtt gaacaatctg ggcggctgcg
     4801 acggcagcag cgggcctttg tcgatcaatc ctgaaacggg cagggaatac ggcgcggatt
     4861 ttccgatggt tacggtgaag gactgggtaa aatcacaagc cgcgcttgcc gattatctcg
     4921 gcatcgaaca atgggcggcg gttgtcggcg gcagcttggg cggcatgcag gctttgcagt
     4981 gggcgatttc ctatcccgaa cgtgtgcgcc acgccttggt gattgcgtct gcgccgaaac
     5041 tgtccacgca aaatatcgcg tttaatgatg tagcacgtca ggcgattttg accgaccccg
     5101 atttcaatga aggacattac cgcagccaca acaccgttcc cgcgcgcggt ttgcggattg
     5161 cccgtatgat gggacacatt acgtatcttg ccgaagacgg tttgggcaaa aaattcggac
     5221 gcgatttgcg ttccaacggc tatcaatacg gctatagcgt tgaatttgaa gtagaatcct
     5281 atctccgcta tcaaggcgac aaattcgtcg ggcggtttga tgctaataca tatttgctga
     5341 tgaccaaagc tttggactat ttcgatccgg cggcggattt cggcaacagc ctgactcgcg
     5401 ccgtgcagga tgtgcaggca aaattctttg tcgccagctt cagcaccgac tggcgtttcg
     5461 cgcccgaacg ttcgcacgaa ctggtcaagg cactgattgc cgcccaaaaa tccgtgcagt
     5521 atatcgaagt caagtccgca cacgggcacg atgccttttt aatggaagac gaagcctata
     5581 tgcgcgccgt aacggcttat atgaacaatg ttgacaagga ttgccgatta tgaacctgcg
     5641 cgatgatttg caactgattt acgaccggat acccgaaggc agccgcgtct tagacttggg
     5701 ctgcggcgac ggcgaattgc tggcggcttt ggcggaacac aaaaaatgca gcggctacgg
     5761 catcgaaatc gacaccgaca acgtgattgc tgcgatgtcg cgcggcgtaa atgttatcca
     5821 agccgatttg gaagaagggt tgaccgcatt caacgatcaa agttttgatg tgattgtttt
     5881 gagccaaacc atccaagcga tgcagaatac cgaaaaaatc ctgcgctgcc tgatgcgcct
     5941 cgccaaacag gcaatcgtca gtttcccgaa tttcggctac tggcgcaacc gcgtccaaat
     6001 cgcactcggc ggacatatgc cggtttccga acgtatgccc taccattggt acgacacgcc
     6061 caatatccat tggtgcacgc tcaaagactt tgatttgttg tgcgccaaaa acaatatccg
     6121 cgtcctcgaa cgcgccgtga tgacgggcaa cagacaggtc aaacatttcc ccaacctttt
     6181 gggcagcctt gcgttttacc gcgtcgggta agacaggttg aaaaccttgt cggcaataac
     6241 gggtttctcg gttctattaa caacagtccg tctgaaaaat gaaacggcag gttttcagac
     6301 ggccttttca atattggaaa caatagaatg aaaaacaaaa cgtcatcact tcccttatgg
     6361 cttgccgcaa tcatgctggc cgcgcgttcc ccgagcaaag aagataaaac gaaagaaaac
     6421 ggcgcatccg ccgcttcgtc ttccgcgtcc caatccgatt tgcaaccggc cgcatccgcc
     6481 cctgataacg tcaagcaggc agaaagcgcg ccactgtgaa attgcaccgg cctgcacccc
     6541 gccgccggca ttggcgatct catacagcaa atcgccgaac acatcgactc ggactgtctg
     6601 tttgcccttt cccataacga actggaaacc cgtttcggct tacccggcgg cggctatgac
     6661 aacatacagc ggctgctgtt tcccgacatc cgccctgaag atcccgacta ccatcagaaa
     6721 atcatgctgg caatcgaaga cttgcgttac ggaacgcgca ccatcagccg gcaggcacaa
     6781 gatgccataa tggaacagga acgccgcctc cgagaagcga cgctgatgct gacacagggc
     6841 agtcaaaaaa cccgcggaca aggcgaggaa ccgaaacgcg cacgttattt tgaagtttcg
     6901 gcaacatctg cctatttgaa ccggcacaac aacggactcg gcggcaattt ccaatacatc
     6961 ggccaattgc ccggctatct gaaaatgcac ggagaaatgc ttgaaaacca atcactcttc
     7021 cggctgtcca accgtgaacg caatcccgac aaaccgtttt tagacatcca ttttgacgaa
     7081 aatggcaaaa tcacgcgtat tgtcgtttac gaaaaaaata tctatagtag attaaattta
     7141 aatcaggaca aggcgacgaa gccg
//
LOCUS       DAWXHA010000099         7160 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.099, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000099 DAWXHA010000000
VERSION     DAWXHA010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7160
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.099"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            225..1600
                     /locus_tag="AABD07_001710"
                     /pseudo
     CDS             225..1600
                     /locus_tag="AABD07_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675025.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
     gene            complement(1662..2414)
                     /gene="rlmB"
                     /locus_tag="AABD07_001711"
     CDS             complement(1662..2414)
                     /gene="rlmB"
                     /locus_tag="AABD07_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HFB2356192.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSITELYIQEGKSDARTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEGILENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGDADLYHCNLPDSTAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNKKA"
     gene            complement(2480..2968)
                     /locus_tag="AABD07_001712"
     CDS             complement(2480..2968)
                     /locus_tag="AABD07_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HFB2356193.1"
                     /translation="MTALLVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGY
                     QIYGAGILWTVGLISLGGILADYMAGMLGVKYTGAGKLAVRGALAGSIIGIFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            complement(2973..3692)
                     /locus_tag="AABD07_001713"
     CDS             complement(2973..3692)
                     /locus_tag="AABD07_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HFB2356194.1"
                     /translation="MLATPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLT
                     LTKSTLWQLESLLNGTPPQEMPQAHKDCLLAELKNHPPVAAFPPQEEMGYFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            complement(3696..4637)
                     /gene="miaA"
                     /locus_tag="AABD07_001714"
     CDS             complement(3696..4637)
                     /gene="miaA"
                     /locus_tag="AABD07_001714"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HFB2356195.1"
                     /translation="MPTPKAFTLLGPTACGKTALALKIAETLPVEIISLDSALLYTGM
                     DIGTAKPSASERAFVPHHLIDIITPVQTYSAARFVEDCTRLTGEITARGKCPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEIYYLTGRPMSAHLNGQPEHTLPFELYTAALIPEDRARLHENIALRFHLMLE
                     QSFIGEVENLRRRYPGLTADSPAIRCVGYRQAWEHLDGATDRQTFIEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSGTRLIEAAKRFFGE"
     gene            4988..5266
                     /locus_tag="AABD07_001715"
     CDS             4988..5266
                     /locus_tag="AABD07_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356196.1"
                     /translation="MSRNLLVRWLAVCLIPLATLAVFAANPPEDKPQHLINGIILACE
                     ATFLFKFVLFETIKHHLKQGFDLKRQTMFLFIPIVLLVVYLFHYFGAF"
     gene            5285..6436
                     /gene="earP"
                     /locus_tag="AABD07_001716"
     CDS             5285..6436
                     /gene="earP"
                     /locus_tag="AABD07_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HFB2356197.1"
                     /translation="MNTYAFPVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWT
                     DDVSALRALCPDLPDVPFVHQDIHVRTWHSDAADIDTAPVPDAVIETFACDLPENVLN
                     IIRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYRE
                     AVRFDTEALRRRLVLPEKNAPEWLLFGYRGDVWAKWLDMWQQAGSLMTLLLAGAQIID
                     SLKQSGVIPQNALQNDGGVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVR
                     TQLAGKPFFWHIYPQDENVHLDKLHAFWDKAYGFYTPETASVHRLLSDDLNGGEALSA
                     TQRLECWQTLQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            6479..7039
                     /gene="efp"
                     /locus_tag="AABD07_001717"
     CDS             6479..7039
                     /gene="efp"
                     /locus_tag="AABD07_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HFB2356198.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVDYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
BASE COUNT         1425 a         1806 c         2152 g         1777 t
ORIGIN      
        1 ttgggtttaa gcagtggatg cgccgttgag gattaaaatg tgttaagcgc atgaaggctc
       61 tctggaaatg aaggactgtc cggtgtggaa attcaaagaa atttgaattc ggacaaccgg
      121 tggtgttttt gcacatgagg atttgaattg ataaggaatc tttgattcgt tacaatttcg
      181 ttcttaaaat tttttaacgt ttggcaacgg atagaaagac tccaatggct gaaacaatga
      241 aaaaacaggc ggattcgcct gatttggtgt acggtttgga agacaggcca ccgttcggta
      301 atgcgctctt gagcgcggtt acccatcttt tggcgatttt cgtgccgatg attacgcccg
      361 cgctgattgt gggcggcgcg ctggaactac cggtggaaat gacggcgtat ctcgtgtcga
      421 tggcgatggt ggcttccggc atcggcactt atttgcaggt caaccgcttc gggccggtcg
      481 gctcggggat gctgtccatc cagcgttacc gtcatgattg cgctcggcgc ggggatgaaa
      541 gagggcggtt tgagtgaggg ggcgatggtt tcgacgctct tgggcgtatc gtttgccggt
      601 gcgtttttgg tgtgtttctc ggcgtggctt ttgccgtatt tgaaaaaagt gattacgccg
      661 acggtcagcg gcgtggtcgt gatgctgatt ggtctgagtt tggtacacgt cggtattgcc
      721 gatttcggcg gcggcttcgg cgcgaaggcg gacggcacgt tcggctcgat ggaaaacttg
      781 gggctggctt cgctggtgct gctgattgtg ctggtgttca actgcatgaa aaatccgctg
      841 ctgcggatga gcggcattgc ggtcggtctg attgccggct actattgtcg cgctgttttt
      901 gggcaaggtg gatttttccg cactgcaaaa cctgccgccg gttacgctgc ccgtaccgtt
      961 taaatatggt tttgcttttg actggcacgc atttattgcg gcgggtgcga ttttcttgtt
     1021 gggcgtgttt gaggcggtcg gcgatttgac ggcaacggca atggtgtccg accagccgat
     1081 tgaaggcgaa gaatacacca aacgcctgcg cggcggcgtg ttggctgacg gcttggtatc
     1141 ggtgattgcg acggctttgg gttcgctgcc gctgacgacg tttgcgcaaa acaacggcgt
     1201 gattcagatg accggagtgg cttcgcgcca cgtgggcaaa tatattgccg tgattttggt
     1261 gctgttgggt ctgttccccg ttgtcggacg cgcgtttacg acgattccga gtccggtgtt
     1321 gggcggcgcg atggttttga tgttcggcct gattgcgatt gcgggcgtgc ggattttggt
     1381 cggccacggc atccgcaggc gcggggcggt gattgcggca acgttggtcg gtttgggctt
     1441 gggcgtgggg tttgagccgg aagtgtttaa aaacctgccc gtcttgttcc aaaactctat
     1501 ttccggcggc ggcattacgg cagtcttgct gaatttggtc ttgccggaag ataaaaccga
     1561 ggcggcggtc aagtttgata ccgaccattt ggaacactga ttttgaaaat gaatgccgtc
     1621 tgaaacagaa tccctgtttc agacggcatt gtttttgagg cttacgcttt tttgtttttc
     1681 aatacgcgtt gccggcgggt ttcgcttaat accattcctg cggacacgga gacgttcatg
     1741 ctttcgaccg tgccgaacat gggtatggac accagcatgt cgcaatgttc gcgcgtgagg
     1801 cggcgcatac cgtcgccttc gttgcccatc acccacgccg tgctgtcggg cagattgcaa
     1861 tggtaaaggt cggcgtcgcc gcccatgtcg gtgccgataa tccaaatgcc gtattctttc
     1921 aattcgcgca gggtgcgggc gaggttggtt acggtgatgt aggggacggt ttccgccgcg
     1981 ccgcaggcga ctttgctgac ggtggcgttc agtcccgcgc ttttgtcttt cggcgcgatg
     2041 acggcgtgta cgcccattgc gtcggcggta cgcaggcacg cgccgaggtt gtgcggatcg
     2101 gtgatgccgt cgagtatcag cagcagcggc ggttcgctca agttttccaa tatgccttcg
     2161 aggtggacgt ggtttttgga ggcatcgata aatccgacca cgccctgatg gcgcgcgcct
     2221 ttgctgatgg cgttgaggcg gtcggcatcg gcaaaatata cgcggatgtt ttcgtttgcc
     2281 gccttttcca gcacttcgcg cgtgcgtgcg tcggatttgc cttcttggat atagagttcg
     2341 gtaatcgatt tggggttttg ccacaatcgg gcgttgacgg cgtggaagcc gtagatgggt
     2401 ctttggtttg ccataatggt gctttgtcgg aaatttcaga cggcattata gcaatttgcc
     2461 ggtatgccgt ctgaaggggt taaaacaggt aggcgatgta tttcaccaac aggataaaca
     2521 agatggatac ggcgcagccg attttgaacg ccgtgccgac gacaagcccc aacagcgtac
     2581 ccaagcccgc tttacctgcc tgaagcatat tgcgccgatc gatcagttcg cctgccgccg
     2641 cgccgataaa ggggccgagt atcagcccgg gcagggagaa aaatatgccg atgatgctgc
     2701 cggccaatgc acctcggacg gcgagtttgc ctgccccagt gtattttacc cccaacatgc
     2761 ctgccatata gtccgccagt atgccgccaa ggctgatgag tccgaccgtc cacaagatgc
     2821 ctgcgccgta gatttgatag ccgccggcat aggcaagcag ccatgttccg gcaaacatca
     2881 atgccaagcc gggcagggcg ggatagacga tgcctgccgt gccgacggct atcagggcga
     2941 gggcgaggat gacgagtagg gcggtcatgg gttcaacctt ttcttttgtt ttggaaaaaa
     3001 cggcttaata cggcgcggca ttcttcttgc aggattccgc cccgtatggc ggtgtgcgta
     3061 ttgaggcgtt tgtcggcaaa caggttgacg atgctgcctg ccgcgccggt tttgggttct
     3121 gccgcaccgt agatcacgcg cctgattcgt gcctgtatca gtgcggacgc gcacatggcg
     3181 cagggttcga gggtgatgta gatgtcgcat ccgtcaaggc ggtagttttg catttcgctg
     3241 cctgcctgtg ccaaggcgtt gatttcggcg tgtcggctga cattgcagtc ggcaatgcag
     3301 gtgttgtgtg ccgatgcgat gattttgccg tctgaaacga tgactgcccc gacgggtatt
     3361 tcgccgtcgg cggcggattg ttctgcttgg cgcagtgctt cgcgcatgaa gtatcccatt
     3421 tcttcctgcg gcggaaaggc ggcgacgggc ggatggtttt tcaactcggc aagcaggcag
     3481 tctttatgcg cttggggcat ttcttgcggc ggcgtgccgt tcagcagcga ctcgagttgc
     3541 cacagcgtgc ttttcgtgag ggtcaaaccc gatgctttga gcagcagaaa ggctttgacc
     3601 gaaccgtttt gccgcagttc ttcgagcgta cggataccga gcctgtgcag ggcggcgacg
     3661 gttttggggg cgagcggcgg cgtggccagc atggtttatt cgccgaaaaa ccgttttgcc
     3721 gcctcaatca ggcgcgtgcc tgaagtgccg tctgaaaacg ggtcggcaac gcagtctaaa
     3781 ggtgttttgc gtaaccaagt tagttggcgt ttggcaagtt ggcgcgtggc ggcaatgcct
     3841 ttttcgatga aggtttgtct gtcggttgca ccgtcgaggt gttcccacgc ctgacggtag
     3901 ccgacgcagc ggatggcggg ggagtcggcg gtcaggccgg gatagcggcg gcgcaggttt
     3961 tctacttcgc cgataaagct ctgttcaagc atcaggtgga aacgcagggc gatgttttcg
     4021 tgcagtcggg cgcggtcttc gggaatcagg gcggcggtgt agagttcgaa gggcagggtg
     4081 tgttcgggct gtccgttcag gtgcgcgctc atcggcctgc cggtcaggta atagatttca
     4141 agggcgcgtc cgatgcgctg gctgtcgttc ggtttcagac ggcatgctgt ttcagggtcg
     4201 actttttgca gggtgcggta gaggaaatcc aaaccgtaca tctgtttttg ttcgtccaag
     4261 tcggcacgca ggcaggcatc ggcttcgggc aaatcgttca aaccttgggt cagggcgcgg
     4321 aaatacatca ttgtgccgcc gacaatcagc ggacatttcc cacgcgccgt gatttcgccg
     4381 gtcagacgcg tgcagtcttc gacaaaacgg gcggcactgt atgtctgaac gggcgtaatg
     4441 atgtcgataa ggtggtgcgg gacaaaggcg cgttcggagg cggacggttt cgccgtgccg
     4501 atgtccatac cggtatagag cagtgcagaa tcgaggctga tgatttcgac cggaagggtt
     4561 tcggcaattt tgagggcgag cgcggttttg ccgcaggcgg tcggcccgag cagggtaaag
     4621 gctttcgggg tcggcataat gtttcaggtt tggaaaaatg cggattatag cggaaagcgc
     4681 gccgccctta tattttgctt tgcggaagca cgccgacggc aaggggcggg tttgccgtac
     4741 gcctttataa aatgcgttca aaccgatgcg tcgggctttc aatatgcccg cgcccgatgc
     4801 cgccttgtcc gcaggcatcg gcggcagcgt ccgatttctc ggggaacgcc cgtcccgggt
     4861 atatttaaag gttcggcggt gcggcgtttt ccggcggcaa ggcttcagac ggcatctccg
     4921 gcgcgtccgt tagacaaggt gcgttcttga ggcgataatg gcgttttgct tttttgaaag
     4981 ccttgcaatg tcccgaaacc tgcttgtccg ctggctcgcc gtctgcctca tccccttggc
     5041 gacgcttgcc gttttcgccg ccaatccgcc cgaagacaaa ccccagcatc tgatcaacgg
     5101 catcatcctt gcctgcgaag cgacgttttt gtttaaattc gtcctctttg aaaccatcaa
     5161 gcatcatctt aaacaagggt ttgatttgaa acgtcaaacc atgtttctgt ttattccgat
     5221 tgttttgctg gttgtgtatt tgttccacta tttcggcgcg ttttagcttg ttttcccgat
     5281 ggttatgaat acatacgctt ttcctgtctg ttggattttt tgcaaggtca tcgacaattt
     5341 cggcgacatc ggcgtttcgt ggcggctcgc ccgtgttttg caccgcgaac tcggttggca
     5401 ggtgcatttg tggacggacg acgtgtccgc cttgcgcgcg ctttgtcccg atttgcccga
     5461 tgttcccttc gttcatcagg atattcatgt ccgcacttgg cattccgatg cggcagacat
     5521 tgataccgcg cccgttcccg atgccgttat cgaaactttt gcctgcgacc tgcccgaaaa
     5581 tgtgctgaac atcatccgcc gacacaaacc gctttggctg aattgggaat atttgagcgc
     5641 ggaggaaagc aatgaaaggc tgcacctgat gccttcgccg caggagggcg ttcaaaaata
     5701 tttttggttt atgggtttca gcgaaaaaag cggcgggttg atacgcgaac gcgattaccg
     5761 cgaagccgtc cgtttcgata ccgaagccct gcgccggcgg ctggtgctgc ccgaaaaaaa
     5821 cgcccccgaa tggctgcttt tcggctatcg gggcgatgtt tgggcaaagt ggctggacat
     5881 gtggcaacag gcaggcagcc tgatgaccct actgctggcg ggggcgcaaa ttatcgacag
     5941 cctcaaacaa agcggcgtta ttccgcaaaa cgccctgcaa aatgacggcg gtgtctttca
     6001 gacggcatcc gtccgccttg tcaaaatccc gttcgtgccg caacaggact tcgacaaatt
     6061 gctgcacctc gccgactgcg ccgtgatacg cggcgaagac agtttcgtgc gtacccagct
     6121 tgccggaaaa cccttttttt ggcacatcta cccgcaagac gagaatgtcc atctcgacaa
     6181 actccacgcc ttttgggata aggcatacgg cttctacacg cccgaaaccg catcggtgca
     6241 ccgcctcctt tcggacgacc tcaacggcgg agaggcttta tccgcaacac aacgcctcga
     6301 atgttggcaa accctgcaac aacatcaaaa cggctggcgg caaggcgcgg aggattggag
     6361 ccgttatctt ttcgggcagc cttccgcatc cgaaaaactc gccgcctttg tttcaaagca
     6421 tcaaaaaata cgctagaata gcgcgtttta cgacaaccga tttgattgga aaatcacaat
     6481 gaaaacagca caagaactgc gcgccggcaa tgtatttatg gtcggcaacg atcctatggt
     6541 cgttcaaaaa accgaataca tcaaaggcgg ccgctcttcc gccaaagtca gcatgaaact
     6601 gaaaaacctg ctgaccggcg ctgcttccga aaccatttac aaagccgacg acaaattcga
     6661 cgtggtcatc ctgtcccgca aaaactgtac gtacagctat tttgccgacc cgatgtacgt
     6721 ctttatggac gaagaattca accaatacga aatcgaagcc gacaacatcg gcgacgcgtt
     6781 gaaattcatc gttgacggta tggaagacca atgcgaagtt accttctatg aaggcaatcc
     6841 catttctgtc gaactgccca ccatcatcgt gcgcgaagtc gactacaccg agcctgccgt
     6901 caaaggcgat acttccggca aagtgatgaa aaccgcgcgt ctggtcggcg gcaccgaaat
     6961 ccaagtgatg tcttacatcg aaaacggcga caaagtcgaa atcgataccc gtaccggcga
     7021 attccgcaaa cgcgcctgat atcctacttg aaaaatgccg tctgaaaacg tttcagacgg
     7081 cattttttta tattcgcccc gtgtttggat tgaagtatag tggattaaat ttaaaccagt
     7141 acagcgttgc ctcgccttgc
//
LOCUS       DAWXHA010000100         7129 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.100, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000100 DAWXHA010000000
VERSION     DAWXHA010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7129
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.100"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            71..2236
                     /locus_tag="AABD07_001718"
     CDS             71..2236
                     /locus_tag="AABD07_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFB2356199.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNANVALDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFAGNNGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNDNGGKT
                     VPYSALDKRSYLAKIGTTFGDGDHRIVLSHMKDQHRGIRTVREEFAVSEKNSRITIKR
                     QAPSYRETTQSNTNLAYTGKDLGFVEKLDANAYVLEKKRYSADDKDNGYAGNVKGPNH
                     TRITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNGEFKISDKEKGPNGTEVD
                     VDVAQKAKNRANEKIVYAYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVKTH
                     DGKTVSSSSLNPSFGVIWQPREHWNFSASHNYASRSPRLYDALQTHGKRGIISIADGT
                     KAERARNTEIGFNYNDGTFAANGSYFRQTIKDALANPQNRHDSVAVREAVNTGYIKNH
                     GYELGASYRTGGLTAKVGVSRSKPRFYDTHPKKLLSANPEFGAQTGRTWTASLAYRFK
                     NPNLEIGWRGRYVQKATGSILAAGQKDRDGKLENVVRQGFGVNDVFANWKPLGKDTLN
                     VNLSVNNVFDKFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
     gene            2388..3353
                     /locus_tag="AABD07_001719"
     CDS             2388..3353
                     /locus_tag="AABD07_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2356200.1"
                     /translation="MLRLTALTLCTALALGACSPQNSDPAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVVLVNGGKMSAFGPSSRLGGWL
                     HKDIGVPAVDESIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            3371..3562
                     /locus_tag="AABD07_001720"
     CDS             3371..3562
                     /locus_tag="AABD07_001720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356201.1"
                     /translation="MPSETRMQTASCVSDGIARYGRYRGNGGKRFDWNLPHPLPVRRF
                     QTRLSAPTVRTALFESPTP"
     gene            3581..4549
                     /locus_tag="AABD07_001721"
     CDS             3581..4549
                     /locus_tag="AABD07_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFB2356202.1"
                     /translation="MTAKPFSLNLANLLLPAVLFAVSLSVGIADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFVAY
                     EFEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFIGLVVPNIVSRLMGDRLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            4539..5513
                     /locus_tag="AABD07_001722"
     CDS             4539..5513
                     /locus_tag="AABD07_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HFB2356203.1"
                     /translation="MPSEKNIGFMAGSSRPLRVAFALLLVSCILFMTVNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYTSLPLTGKFGFELVVMMGGSLLLFYTLIRQGGRDLPHMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVRSELLGIGALVLLVSAAVVWRERYRSDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            5558..6184
                     /locus_tag="AABD07_001723"
     CDS             5558..6184
                     /locus_tag="AABD07_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356204.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGTRDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRNLLSFGAGEINGTLTLRRKDSGKTVAVSLNAALQPFAPQ
                     MRDIMPKAVGGSASAKELERFGQLWQARVKAFLTESADDPQFVIVREL"
     gene            6268..7026
                     /locus_tag="AABD07_001724"
     CDS             6268..7026
                     /locus_tag="AABD07_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFB2356205.1"
                     /translation="MITIRNVSYRIGTHPILDNVSLDIPEGGITALIGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLAGTPTAELARTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILQKLTHEHKRTTVAVLHDINQAAAYADHVVAMKNGKAALTG
                     TPEEVFTVHNIKELFDMDVDVLDYEGKKLIVHHI"
     gene            complement(7061..>7129)
                     /locus_tag="AABD07_001725"
     CDS             complement(7061..>7129)
                     /locus_tag="AABD07_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFB2356206.1"
                     /translation="EFRFNSGTPSRQLKILRDRCGI"
BASE COUNT         1638 a         2144 c         1854 g         1493 t
ORIGIN      
        1 ttttttctta tcctgccaaa ccttaacggt ttggcttaac ttcccttcat acactcaaaa
       61 ggacgaacaa atgaacgccc cgtttttccg cctcagcctg ctctcgctca cacttgccgc
      121 cggctttgcc cacgcggcag aaaataatgc caatgtcgca ttggataccg ttaccgtaaa
      181 aggcgaccgc caaggcagca aaatccgtac caacatcgtt acgcttcaac aaaaagacga
      241 aagcaccgca accgatatgc gcgaactctt aaaagaagag ccctccatcg atttcggcgg
      301 cggcaacggc acgtcccaat tcctgacgct gcgcggtatg ggtcagaact ctgtcgacat
      361 caaggtggac aacgcctatt ccgacagcca aatcctttac caccaaggca gatttattgt
      421 cgatcccgct ttggttaaag tcgtttccgt acagaaaggc gcgggttccg cctctgccgg
      481 tatcggcgcg accaacggcg cgatcatcgc caaaaccgtc gatgcccaag acctgctcaa
      541 aggcttggat aaaaactggg gcgtgcgcct caacagcggc tttgccggca acaacggcgt
      601 aagctacggc gcaagcgtat tcggaaaaga gggcaacttc gacggtttgt tctcttacaa
      661 ccgcaacgat gaaaaagatt acgaagccgg caaaggtttc cgcaatgaca acggcggcaa
      721 aaccgtaccg tacagcgcgc tggacaaacg cagctacctc gccaaaatcg gaacaacctt
      781 cggcgacggc gaccaccgca tcgtattgag ccacatgaaa gaccaacacc ggggcatccg
      841 cactgtgcgt gaagagtttg ccgtcagcga aaaaaattca cggataacta ttaaacgcca
      901 agccccatcc taccgcgaaa ccactcaatc caacaccaac ttggcgtaca ccggcaaaga
      961 tttgggcttt gtcgaaaaac tggatgccaa cgcctatgtg ttggaaaaga aacgctattc
     1021 cgccgatgac aaagataacg gctacgcagg caatgtaaaa ggccccaacc atacccgaat
     1081 taccactcgg ggtatgaact tcaacttcga cagccgcctt gccgaacaaa ccctgttgaa
     1141 atacggcatc aactaccgcc atcaggaaat caaaccgcaa gcgtttttga acggcgaatt
     1201 taagatctcc gataaggaaa aaggacccaa cggaacagaa gtcgacgtag atgtagcaca
     1261 aaaagcaaaa aaccgtgcaa atgaaaaaat tgtttacgcc tacaaacttt ccaacccgac
     1321 caaaaccgat accggcgcgt atatcgaagc cattcacgag attgacggct ttaccctgac
     1381 cggcgggctg cgttacgacc gcttcaaggt aaaaacccac gacggcaaaa ccgtttcaag
     1441 cagcagcctc aacccgagtt tcggcgtgat ttggcagccg cgcgaacact ggaacttcag
     1501 cgcgagccac aactacgcca gccgcagccc gcgcctgtat gacgcgctgc aaacccacgg
     1561 caagcgcggc atcatctcga ttgccgacgg caccaaagcc gaacgcgcgc gcaataccga
     1621 aatcggcttc aactacaacg acggcacgtt tgccgcaaac ggcagctact tccggcagac
     1681 catcaaagac gcgcttgcca atccgcaaaa ccgccacgac tccgtcgccg tccgcgaagc
     1741 cgtcaacacc ggctacatca aaaaccacgg ttacgaattg ggcgcgtcct accgcaccgg
     1801 cggcctgacc gccaaagtcg gcgtaagccg cagcaaaccg cgcttttacg atacccatcc
     1861 taaaaaactg ttgagcgcga accccgagtt tggcgcacaa accggccgca cttggacggc
     1921 ctcccttgcc taccgcttca aaaacccgaa tctggaaatc ggctggcgcg gacgctatgt
     1981 tcaaaaagct acgggttcga tattggcggc agggcaaaaa gaccgcgacg gcaaattgga
     2041 aaacgttgta cgccaaggtt tcggtgtgaa cgacgtcttc gccaactgga aaccattggg
     2101 caaagacacg ctcaatgtca atctttcggt taacaacgtg ttcgacaagt tctactatcc
     2161 gcacagccaa cgctggacca ataccctgcc gggcgtggga cgtgatgtac gcctgggcgt
     2221 gaactacaag ttctaaaacg cacatcccga aaaaatgccg tctgaaagcc tttcagacgg
     2281 catctgtcct gataatttga tatagattat catttatcct ttctaaagcc gttccggttt
     2341 gtccgaccgg cggctttgcc ccaatatccc cattttggag acaccctatg ttgcgtttga
     2401 ccgcattgac cctctgcacc gccctcgcct tgggcgcgtg ttcgccgcaa aattccgacc
     2461 ctgccccaca agccaaagaa caggcggttt ccgccgcaca atccgaaagc gcgtccgtta
     2521 ccgtcaaaac cgcgcgcggc gacgttcaaa taccgcaaaa ccccgaacgc atcgccgttt
     2581 acgatttggg tatgctcgac accttgagca aactgggcgt gaaaaccggt ttgtccgtcg
     2641 ataaaaaccg cctgccgtat ttagaggaat atttcaaaac gaccaaacct gccggaactt
     2701 tgttcgagcc ggattacgaa acgctcaatg cctacaagcc gcagctcatc atcatcggca
     2761 gccgcgcagc caaggcgttt gacaaattga acgaaatcgc gccgaccatc gagatgaccg
     2821 ccgataccgc caatctcaaa gaaagtgcca aagagcgtat cgacgcgctg gcgcaaatct
     2881 tcggcaaaca ggcggaagcc gacaagctga aggcggaaat cgacgcgtct tttgaagcgg
     2941 cgaaaaccgc cgcgcaaggc aaaggcaaag gtttggtggt tttggtcaac ggcggcaaga
     3001 tgtccgcctt cggcccgtct tcacgactgg gcggctggct gcacaaagac atcggcgttc
     3061 ccgctgtcga tgaatcaatt aaagaaggca gccacggcca gcctatcagc ttcgaatact
     3121 tgaaagagaa aaatcccgac tggctgttcg tcctcgaccg cagcgcggcc atcggcgaag
     3181 agggtcaggc ggcgaaagac gtgttgaaca atccgctggt tgccgaaacg accgcatgga
     3241 aaaaaggaca ggtcgtttac ctcgttcccg aaacttattt ggcagccggc ggcgcgcaag
     3301 agctgctgaa cgcgagcaaa caggttgcgg atgcttttaa cgccgcgaaa taatgaaacg
     3361 gcggcattcg atgccgtctg aaacacggat gcaaaccgct tcctgtgttt cagacggcat
     3421 tgcccgatac gggcgttatc gcgggaatgg cggcaagcgt tttgattgga acttgcccca
     3481 tcctctgccc gtccggaggt ttcaaacaag gctttccgct ccgacggttc ggactgcctt
     3541 gtttgaatct cctacgccgt aacgcttttc ccttctgttt atgactgcca aacctttttc
     3601 cctcaacctg gccaacctcc tgctgccggc ggtgttgttt gccgtcagcc tgtcggtcgg
     3661 cattgccgat ttccgctggt cggatgtgtt ttcgctgtcc gacagccaac aggtcatgtt
     3721 catcagccgc ctgccgcgca cgtttgcgat tgtgttgacg ggcgcgtcga tggcggtggc
     3781 ggggatgatt atgcagattc tgatgcgcaa ccgttttgtc gagccttcta tggcgggtgc
     3841 gggccaaagt gcggctttgg gtttgcttct gatgtccctg ctgctgcctg ccgcgccgct
     3901 gccggtcaaa atgtcggttg ccgccgttgc cgcgctgatc gggatgttgg tctttatgct
     3961 gctgatccgc cgcctgccgc cgacggcgca gctgatggtg ccgctggtgg ggattatttt
     4021 cggcggcgtg gttgaggcgg tggcgacgtt tgtcgcgtat gagtttgaga tgctgcaaat
     4081 gttgggcgtg tggcagcagg gcgacttttc aagcgtgctg ctggggcggt acgagctgct
     4141 ttggattacg ggcggtttgg cggtgtttgc ctacctgatt gccgaccggc tgacgatttt
     4201 ggggctgggc gagacggtca gcgtgaattt gggtttgaac cggacggcgg tgttgtggtc
     4261 gggtttgatt attgtggcac tgattacatc gctggtcatt gtaacggtcg gcaatattcc
     4321 gtttatcggg ctggtcgtgc cgaatatcgt cagccgcctg atgggcgaca ggctgcgcca
     4381 aagcctgcct gcggtcgccc tcttgggcgc gtctttggtt ttattgtgcg acattatcgg
     4441 acgcgtgatt gtgtttccgt ttgaaattcc ggtctctacg gtttttggtg tgttgggtac
     4501 ggctttgttt ttgtggcttt tattaaggaa acctgcccat gccgtctgaa aaaaatatcg
     4561 gttttatggc aggaagcagc cgtccgttgc gggtcgcctt tgcgctgttg ctggtttcct
     4621 gcatcctgtt tatgacggtc aacgtcaaag gcgattggga ctttgtcttg cacctgcgcc
     4681 tgaccaagct tgccgcgctg ctgatggtcg cctatgcggt cggcgtgtcc actcaactct
     4741 tccaaacgct gaccaacaac ccgattctga ccccttcgat tttgggtttc gattcgctgt
     4801 atgtgttttt gcagaccttg ctggtgttta cgttcggcgg cgtgggctat acatccctgc
     4861 cgttgacggg caaattcggc tttgaactgg ttgttatgat gggcggctcg ctgctgctgt
     4921 tttacacgct catccgtcag ggcgggcgcg atttgccgca catgatttta atcggcgtga
     4981 ttttcgggat tttgttccgc agcctttcct cgctgctttc gcgcatgata gaccccgaag
     5041 aatttaccgc cgcgcaggcg aatatgtttg ccggattcaa taccgtccgc agcgagcttt
     5101 taggcatagg cgcgctggtc ctgctcgtca gcgcggcggt cgtttggcgc gaacgctacc
     5161 gctcggacgt acaccttttg gggcgcgacc aagccgtcaa tttgggcatc agctacacgc
     5221 gcaacacctt atggatactg ctttggattg ccgcattggt ggcgacggcg accgccgttg
     5281 tcggcccggt gagctttttc gggcttctcg ccgcctcgct tgccaaccac ttttccccgt
     5341 ccgtgcgcca ttccgtccgc ctgccgatga cggtttgcgt cggcggcatc ctcttggtcg
     5401 gcggacaaac cgtattcgaa cacttcttgg gcatgaaggc ggtattaagc gtggtggtcg
     5461 aatttgcggg cggactcgtt ttcctctatc tcgttttaaa acacaaaaaa tgacggatgc
     5521 cgtctgaacg gcagcccgcc ccgaaaggac aaaccatatg acgcaagaac gtttacccga
     5581 atttttcgac cgcgccccga cgctgaccgt acaagacccg cttgccgcat tcctcggcgc
     5641 ggccgaaaac ggcatcctca cttaccgcta cgccgatgcc gtgcgcctgt gcggacattc
     5701 ctgcccgacc gtcgcgggcg cgtacctgat ggttatcaaa ggcctgaaag cactttacgg
     5761 cgaagagctg cccgaacgcg gcggcatcga agccgccatg cagggaacgc gcgacgaagg
     5821 cacggtcggc gtaaccgcgt ccgtcgtcca actccttacc ggcgcagccc ccgaaaccgg
     5881 cttcggaggc atcggaatgc agggacgctt cgcccgccgc aacctcttat cctttggtgc
     5941 aggcgaaatc aacggcacac tgaccctgcg ccgcaaagac agcggcaaaa ccgtcgccgt
     6001 cagcctcaac gccgccctgc aaccctttgc acctcaaatg cgcgacatca tgcccaaagc
     6061 cgtcggcggc agcgcaagcg caaaagaact cgaacgcttc ggacaacttt ggcaggcacg
     6121 cgttaaagca tttttgaccg aatcggcgga cgacccgcag ttcgtcatcg tccgcgaact
     6181 gtgaacgttc agacggcatt ccgaatttca aatgccgtcc gaacccccgc caaacaacaa
     6241 caaacctacg cccgacaagc atccgccatg attaccatcc gcaacgtcag ctaccgcatc
     6301 ggcacacacc ccatcctcga caacgtcagc ctcgacatcc ccgaaggcgg cattaccgcg
     6361 ctaatcggcc ccaacggtgc gggcaaatcc accctgtttt cctttatggc gcggctgcgc
     6421 ccgcttgaaa gcggcagcat cgcctaccga ggcaaaaacc ttgccggcac ccccaccgcc
     6481 gaactcgccc gcacgctctc catcctcacc caagaaaaca gcatcatgag ccgcatcacc
     6541 gtgcgcgacc tgctgatgtt cggccgttac ccctaccatc aaggcagacc gactgccgaa
     6601 tgccgccgta tcgttaacgg tgcaatcgaa gaattccacc tgcaggacct ctccgaccgc
     6661 tacctgaccg aactctccgg cggacaacgc caacgcgcca tgattgcgat ggtgttctgc
     6721 caaagcaccg actacgtcct tttggacgaa ccgctgaaca acctcgatat gtatcacgcc
     6781 cgctcgctca tgcagattct gcaaaagctc acgcacgaac acaaacgcac caccgtcgcc
     6841 gtattgcacg acatcaacca ggccgccgcc tacgccgacc acgtcgtcgc catgaaaaac
     6901 ggcaaagccg ccctgaccgg cacacccgaa gaagtgttca ccgtacacaa catcaaagaa
     6961 ctgttcgaca tggacgtgga cgtactcgac tacgaaggta aaaaactcat cgtccaccac
     7021 atctgaagct caaaaagaaa ggggctgtac tagattatcc ctaaattcca caccgatccc
     7081 gcaggatttt tagctgccgg gacggtgtgc cggagttaaa tcgaaattc
//
LOCUS       DAWXHA010000101         7106 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.101, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000101 DAWXHA010000000
VERSION     DAWXHA010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7106
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.101"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(67..285)
                     /locus_tag="AABD07_001726"
     CDS             complement(67..285)
                     /locus_tag="AABD07_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356207.1"
                     /translation="MKFINTCRKYGAKLAVVTAAPLALAAQANAALPETAKNALEAAK
                     ADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            complement(359..556)
                     /locus_tag="AABD07_001727"
     CDS             complement(359..556)
                     /locus_tag="AABD07_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356208.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAV
                     NAGLEEIGNQCEFVVFGFLKD"
     gene            complement(561..851)
                     /locus_tag="AABD07_001728"
     CDS             complement(561..851)
                     /locus_tag="AABD07_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356209.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            complement(896..2225)
                     /locus_tag="AABD07_001729"
                     /pseudo
     CDS             complement(896..2225)
                     /locus_tag="AABD07_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705962.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
     gene            2897..3301
                     /locus_tag="AABD07_001730"
     CDS             2897..3301
                     /locus_tag="AABD07_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HFB2356210.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWHG
                     HIAEITDLSAAKRGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFEN
                     DATFPAPIWANPVRKHGMTLPQNWTEQLKKLL"
     gene            3341..4522
                     /locus_tag="AABD07_001731"
     CDS             3341..4522
                     /locus_tag="AABD07_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HFB2356211.1"
                     /translation="MTEPTSRRRFLKTCTAAGAGLLQACGTSATSVPPLPSSHSVVKA
                     RTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRFQ
                     RFAGTDAQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGTL
                     FFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGTTQNRLTVDV
                     PYIQRADVETEGTLWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNTL
                     YLSGILGKQRAIVFGDFRMEKIRDLYDSSYDFSAVAKHISRTAKIPVLTGFPFGHIAD
                     KITFPLGAHTRIRMNGNGGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADIS
                     E"
     gene            complement(4625..6880)
                     /locus_tag="AABD07_001732"
     CDS             complement(4625..6880)
                     /locus_tag="AABD07_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HFB2356212.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQTTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     AYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPKLQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPGEVFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNARFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAPDLIFIGGAICVAI
                     QATKIVFGRDK"
BASE COUNT         1747 a         1895 c         1732 g         1732 t
ORIGIN      
        1 gaaataaagg ttttcggccc ggtgcttctc aagacattta tttccgactt ggcagtacat
       61 gccgccttac ttcatcaccc tcttaacgat ggaaaataca aaaagcgcgg cgaaaacgcc
      121 cactacaatc caaccggctt ccataccgtc cgcttttgcg gcttccaaag cgttttttgc
      181 cgtttcgggc aacgctgcgt ttgcctgtgc cgccaaagcc agcggggcgg ctgttacaac
      241 agccagtttt gcgccgtatt tacggcaggt gttaataaat ttcatgatat tttccttcaa
      301 aaagtgtttg gcggtaatgg atggagagtt tttcagacga ccgccgaaca tccgaaaatc
      361 agtctttcaa aaatccgaat acgacaaatt cgcattggtt gccgatttct tccaaacctg
      421 cgttaaccgc ttcttcgaag tcgtagaaat aatcggcatt ggtaattaat ttggtatgtc
      481 cgatgtcgcc cgtttcagga gagagataca gaaagtcccc tgttgatacg gactggacaa
      541 catagacttt ctgcattcaa tcagcctttc ttaacgagtt gaaaaccgat gactttcagt
      601 ttttgagttt tgcccgtagt gacgatttcc acgttcaggt ttgcttcgat cggaaattgg
      661 gcgtttcgga actgctcgaa attggcagag ccgccgaaat cgtattcagt agtagagctg
      721 cccaatgcgt tgccttggga gctgtctaag ggtgtggcga caatcaggcg gcaatagtcg
      781 aagctcttgc cttcgatttg tccgttgaat tttttaacgc cgacgatgtg gccttgaagt
      841 tggatgttca ttttttggtt tccttgtgtg attaaacgtc tttcgggcag acactttaag
      901 cccatgaaat cggtaaattt gcgtatttgt catacatctt ctctaaataa cgctgctctt
      961 cccctgtttt ttgacgctga atatatcgat ccatccacat gccgtattgg tcaaatttta
     1021 gaacggacgg aatttcatgc agtggcgtta gctttgcctc gctgcaatcg taattctcga
     1081 agctcagttt tttaggcaaa aaatcatgtt tcggctcaag cacttcaaac aattcttgtt
     1141 tggatttgtc cggaaacact gctttcgatg cattgattcc tcgtccgatt tgctttttca
     1201 gtcgttctat ataggtatcg aaatcaatca tgatcttgct tttgaccgct tcaatacggt
     1261 ttgcactgcc tgtaaaccgt tcgcaaatcg ggtatgctcc gccgaaatac tcgcccggtg
     1321 tctgtaagac ttcaaaggga attacaatgt ctttcgcttt gaattcgatt tcaaagcgcg
     1381 tccatgtgct tgttttatcg ccaagctgct tgcctttttc atagattcgt acatattttg
     1441 aagactcacg cgaacctatg ccgtaggttt tgccgctcgt cattttggtt tcgtcgtctt
     1501 cttcctccca atcagaacca agacactcgc ccttcggttt gacgtgatgg cacgtaaaca
     1561 aacctttatt gcggtcttct cttgcctgat tcgggctgta ctctccgttg aaaaagtctt
     1621 ttgcaatgtc aacgcgcgtt atttttggac gaatcgcatt tgtcagaaaa tcaaaaagcc
     1681 ttgattccca tccaatattt gcagcattgc agcctaccgc cgtcaattca accaacatcg
     1741 tttcacgttg gccgccgtaa tggacgcgcc cgtattgggc attttccgtt cccatcagcc
     1801 agcagccttc atagaaacgc ccgcccgaat gcttggcttt ttcaatgatt ccgaatccga
     1861 aaatttcctc catcttggcg gaagccgcgc gtatgaaatc gtcatcatcg aacaaatcaa
     1921 acgaaagtcc ataaacatgg aaaaacgtgt cttcatgaat tgaaaatgtg atttggtcaa
     1981 tgaaagccga atctgataca ccgcgcctaa gaggaacgcc taacaggttt cctttaccgt
     2041 ccgttatgta cgtttcgtaa cattcgaaga cttcctgaac cctgcccgcc gtttcggttt
     2101 ctgtaccccc cctgttagat aagggggggg ggaagattcg aagcggttgc cggcttcctg
     2161 ccgtccgccg gcgcctccgt catcacgccg gcaaccgcct ttgtcatccc ttgcttatct
     2221 cccatttgcg aatcctcaaa aacgggcaaa aaaaaagccc tgttacttgt agaaagtaaa
     2281 gggcgttaat ttttgttaat cgccccttct tagggacgca atatataagg tttcagacgg
     2341 cattgttctc ccgccgtcat tcccgcgcag gcgggaatcc ggaacgtaaa atctaaagaa
     2401 accgttttat ccgataagtt tccgtgccga caggcccgga ttcccgcctg cgcgggaatg
     2461 acgggatttt aggtttctga ttttggtttt ctgtttttga ggaaatgacg ggattttagt
     2521 aaccgtaaca actgcctgcg cgacggctaa ggggcttcag caaccgtagc aactgcctgt
     2581 gtgggaatga cggacaatgg gcttcagacg gcatctcttg ccttccgcta aaacagtttg
     2641 ccgcacaact gttcaaacgc gtccgatatg tttcaacaca caggacgaca cataaagcac
     2701 cgccctatat gtcgtcctga ttcggaaggg gttacgcccc tcccaaacaa agtctgatcc
     2761 tgccgcccta aagggcgggg tttcaaccga aaaggaaaca cgatgaagtg gtacaattaa
     2821 cggcaatgcg gacagacaaa ttaaactatc agaaattgcc ctaccgtttt ttaaacactt
     2881 tcaggaataa ggaaaaatga ccgcccaacc ctgccccatc tgcacggcac aagatgaaga
     2941 tattttgctg caaaccccca agctgcgcgt catcgccgtc cataacgaca gcggttcgcc
     3001 ggcattctgc cgcgtcattt ggcacggaca cattgccgaa attaccgacc tttcggcagc
     3061 gaaacgcggc gaattgatgg aaatggtgta caaagtcgaa gccgctatgc gccaagtgtt
     3121 ccggccggca aaaatcaacc tcgccagctt gggcaatgtc gtgccgcacc tgcattggca
     3181 tattatcgcc cgctttgaaa acgatgcgac tttccctgcg ccgatttggg caaaccccgt
     3241 ccgaaaacac ggtatgaccc tgccgcaaaa ttggacggaa cagcttaaaa agctgcttta
     3301 aacccgccga tgccgtctga aaccgtatga aagggaaatt atgaccgaac cgacctcccg
     3361 ccgccgtttt ctgaaaacct gcaccgccgc cggcgcgggg ctgcttcagg cttgcggcac
     3421 atccgccaca tccgttccgc cccttccctc ttcccattcc gttgtgaaag cccgaaccgt
     3481 gcctctccaa acgccacgcc gtcaaagttc ggacggcaac cttctgcgcg ttgtcgcttc
     3541 gtcaggattt gccgaagaca ccaaccgcgt caacacagcc ttaacccgcc tttacaatgc
     3601 cggttttacc gtaaccaacc aacaggcggg cagccgccgt ttccaacggt ttgccggcac
     3661 ggacgcgcaa cgcgcggcag atttccaaga ggtcgcctcc ggccgcgtcg ccacgcctaa
     3721 agtgctgatg ggcttgcgcg gcggttacgg tgcggcgcgg attctgccgc atatcgattt
     3781 tgcctcgctc ggcgcaagga tgcgcgaaca cggcacgctg tttttcggat tcagcgacgt
     3841 atgcgccgtc caactggcat tgttggcaaa aggcaatatg atgagttttg ccggcccgat
     3901 ggcttatagc gattttggca aacctgcccc cggtgcgttt acgatggatg cctttatcaa
     3961 ggggacaacc caaaaccgcc tgaccgttga tgttccttat atccaacgcg ccgatgtcga
     4021 aaccgaaggc acgttgtggg gcggcaactt aagcgtcctc gcctcgctcg ccggtacgcc
     4081 ttatatgccc gacatcgacg gcggcatttt gttcctcgaa gatgtcggcg aacagcccta
     4141 ccgcatcgaa cgtatgctca atacgctgta tctttcgggt attttgggca aacagcgcgc
     4201 catcgtgttc ggcgatttcc gtatggaaaa aattcgagat ctctatgatt cgtcttatga
     4261 tttttccgcc gttgccaagc atatttcgcg cacggcgaaa atccccgtgc tgacgggctt
     4321 cccgttcgga cacattgccg acaaaatcac tttccctctg ggcgcgcaca cccgaatccg
     4381 tatgaacgga aacggcggct attcggtcgc gtttgaaggc taccccacac tcgatgcgtc
     4441 cgccctgact ttggataccc tgctcccacc gccggatttg cctatcttcc ccgaaagcgg
     4501 tgttgccgat atttcggaat aaacccgcaa acggacaaat gccgtctgaa gccttcagac
     4561 ggcattttcc tgtaaaaaaa accgcacctg atggcaggtg cggtttccat tttcaggcta
     4621 aaacttattt gtcgcggccg aatacgattt tagtggcttg gatggcaacg cagattgcac
     4681 cgccgataaa gattaagtcg ggggcagtgc gtacccagcg cagggtgtcg aggatttcca
     4741 tttgcaggaa ttcttcgctg cgggcatacc acaaaccgtg cgtgatagag gcgtatgcct
     4801 gaatcacgcc gacaggcagc aggctgatgg caatcatacc gaccaagccg ccgttgagca
     4861 gccagaagcc ccaagtcatc agtttgtcgt caaaccgcgc gttcggtttc aagtagcgcg
     4921 caaccaacaa tacgaagccc aatgccaaga aaccgtacac accgaacaag gcggcgtgcg
     4981 cgtgaacggc ggaagtgttc aaaccttgga tatagaacag ggaaatcggc ggattgatca
     5041 gaaagccgaa tacgccggca ccgatcatat tccaaaaagc gactgccacg aagcacatca
     5101 gcggccaacg caggcgtttc gcccagtcgg acaggtgttg gtaagaccag tgctcgtatg
     5161 cctcgcggcc cagcaacacc agcggcacga cttccaaagc ggagaagcag gcgccgattg
     5221 ccatagaggc ggaggtagag ccggagaagt acaggtggtg cagcgtgccc ggaacgccgc
     5281 ccaacataaa gatggcggca gcggccaaag tggaggcagt ggcggtactg cggcggacaa
     5341 agcccatatt gtagaagaca aaggcaaagg cggcagtggc aaatacttca aagaagcctt
     5401 ccacccacag gtggaccacc caccaacgcc agtattccat tacggcaatc ggggattttt
     5461 cgccatagaa caggcccggt gcgtagaaca cgcccacgcc gaccatagaa gcgacaaaga
     5521 ttgccagcaa gtttttgtcc acgccttttt ctttgaaggc ggaaaccgtg cagcgcaaca
     5581 tcaggaacag ccacaacagc agtccgacca tcaaaaggag ttgccagaaa cgtcccaaat
     5641 cgaggtattc gtaaccttgg tgtccgaacc agaagttaaa ttcgggagga aggatgtgcg
     5701 tcaacgcgaa gaagttgccc gcgtaagaac cgccgaccac gatgaagagg gcgatataga
     5761 ggaagttcac gcctgcacgt tggaacttgg gatctttgcc gccgttgaca atcggcgcga
     5821 ggaacaaacc tgccgtcaaa aagccggttg caatccagaa gatggcggat tggatgtgcc
     5881 aagtacgggt cagggcgtag gggaaccagt cggacatttc aaagcccaac gcctcgtcaa
     5941 tgccgtagaa accctgacct tcgacggtgt agtgcgcggt caggccgccc agcaatactt
     6001 gtaccacaaa cagggcgacc gtcaggaaga cgtatttgcc caatgctttt tgcgaagggg
     6061 tcagttggat tttggaaatc gggtcttcag acggcacttc cacttcctcg tgtttggtca
     6121 ggaaggaata accccacatc aacaaaccga tgcccatcaa gagcagtacg acactggtaa
     6181 acgaccacat gtagttttca gtagtcggta cattgttgat caaaggctcg tgcggccagt
     6241 tgttggtgta ggtaaagacc tcgccgggac ggttggtcga agcagaccaa gaagtccaga
     6301 agaagaagtc gaacagtttt tcacgcgctt cttggcttgg caatgtgttg tttttcattg
     6361 caaagtgttc gcgggtggtt tgcaacttgg gatcatcgcc gtaaacgccg tgatagtaag
     6421 gcaggatgct ttcgatggct ttcacgcgcg tatcgctgat gacgacgctg ccgtcttctt
     6481 taatacggct ttgattgcgg tattcatcgg ccaagcgggt tttcagaacg gcttgttctt
     6541 caggggaaac ttcatcgaat tttttgccgt aagcctgttg cgcggtcaaa tccaaccagg
     6601 cggacaactc acgatgcagc cagtcggccg tccaatccgg agcctgatat gcgccgtgtc
     6661 ccagaatcga accgacttcc atgccgccgg tagtctgcca cgcagactga cctgccaaaa
     6721 tatcgtcttt cgtcatcagc actttgccgg atgcggaaac gacctgttcg gggtaaggcg
     6781 gggctttctt ataaacctcg ctgcccatat agccaagaat ggtaaagcat accgccagaa
     6841 cggcaaacag caagtaccac agcttcttgt actgtcccat tttgagagct ccttttaata
     6901 aatcagttgt ttaaaattca caaaatatga atgttaaaga ttgtagcatg gtttaccgcg
     6961 caaataaaca tttgttcaaa caaactcaca tatagaacaa atacatatat gataataact
     7021 atcattattc tttactcgga aattgccctg cctttgcctg ctctgccgga gcccctagca
     7081 aatcagccta ttcattgtaa ttttta
//
LOCUS       DAWXHA010000102         7085 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.102, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000102 DAWXHA010000000
VERSION     DAWXHA010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7085
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.102"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            70..960
                     /gene="ubiA"
                     /locus_tag="AABD07_001733"
     CDS             70..960
                     /gene="ubiA"
                     /locus_tag="AABD07_001733"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HFB2356213.1"
                     /translation="MNLKSPLFLRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQFYLGLAFSFGIP
                     MAFAAVGNSVPVEAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFAAIFAHTFFAK"
     gene            1145..1594
                     /gene="ptsN"
                     /locus_tag="AABD07_001734"
     CDS             1145..1594
                     /gene="ptsN"
                     /locus_tag="AABD07_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HFB2356214.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHASVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVASAEEARAILTEE"
     gene            1598..2560
                     /locus_tag="AABD07_001735"
     CDS             1598..2560
                     /locus_tag="AABD07_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HFB2356215.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANDLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            2541..3395
                     /gene="rapZ"
                     /locus_tag="AABD07_001736"
     CDS             2541..3395
                     /gene="rapZ"
                     /locus_tag="AABD07_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HFB2356216.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDLGYFCVDNLPLEMLPSLVSYH
                     IERADETELAVSVDVRSGIDIAQAREQIAYLRGLGHRVEVLFVEAEEAVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVVLESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLAQEM
                     VDGIERFVTRWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLSGR"
     gene            3476..4417
                     /gene="ylqF"
                     /locus_tag="AABD07_001737"
     CDS             3476..4417
                     /gene="ylqF"
                     /locus_tag="AABD07_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HFB2356217.1"
                     /translation="MAIQWFPGHMNKARKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDDNSWLEWIAKKRGAVLSGGRVNYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            4518..5120
                     /locus_tag="AABD07_001738"
     CDS             4518..5120
                     /locus_tag="AABD07_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HFB2356218.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLIEMPSTDEEEPETVPSDTLPN"
     gene            5304..6977
                     /gene="recN"
                     /locus_tag="AABD07_001739"
     CDS             5304..6977
                     /gene="recN"
                     /locus_tag="AABD07_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HFB2356219.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPALKAELREQGLLDEGGEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGGQLIDIHGQNDHHSLNQEAAQRELLDAFVGGRVQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGHSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAGRLSSETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRIEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
BASE COUNT         1771 a         1834 c         1883 g         1597 t
ORIGIN      
        1 attggttatt ggaactagaa gtttatggat tagttttcca agggtgtaag acttatatga
       61 aagagggtta tgaatcttaa atccccttta tttttacgac tgtccgatcg tttggacgtt
      121 tatatcagac tgatgagggc ggacaagccc attgggacgc tgcttttact gtggccgacc
      181 tactgggcat tgtggctggc ttcagacggc attcccgatt tggcggtatt ggcggcgttt
      241 acaatcggca cgtttttaat gcgcagtgcc ggctgcgtca tcaacgactt tgccgaccgt
      301 gattttgacg gtgctgtcga gcgcaccaaa aaccgtccgt tcgcacaggg cagggtcaag
      361 aaaaaagaag ccctgctgct gacggcattt ttgtgtctgc ttgccgcatt gtgcctgatt
      421 ccgctgaatc atctgacatg gctgatgagc ctgcccgcgc tgttccttgc gctgacttac
      481 ccgtttacca aacgcttttt tccgattccc caattttatc tgggacttgc cttttccttc
      541 ggcatcccga tggcgtttgc cgcagtgggc aacagcgttc ccgttgaagc gtggatactc
      601 tttgccgcca atgttttatg gacactggct tacgataccg tctatgcaat ggcggacaaa
      661 gaggacgatt tgaaaatcgg catcaaaacc tccgccgtca cgttcgggcg ttacgacatc
      721 gccgccgtta tgctgtgtca tggcggcttt accctgctga tggcagtatt gggtgcggtt
      781 atcggtgcgg catgggcata ttggacggca atccccatcg tcctgctgct gcaataccgc
      841 caatatgccg ccatcaaaag ccgcgtccgg caaatctgtt ttgaaacgtt tttggcaaac
      901 aacagaatcg gttgggtgtg gtttgccgct atttttgccc atacgttttt cgcgaaataa
      961 ggcagggcaa tgccgtctga agaaccgtaa actgctttgg acggcatttc tatctgtgcc
     1021 gaaaagcgtt aaaatatgtt tttgaaacgc tgtgttatgt cagcccgtgc cgtatgcggg
     1081 attgagattt gccccggcag tcggtacaat ccttctgttt tgcgatgtct gaaaagagaa
     1141 gcttatgagc cttatcggcg aaattttgcc tttgtcccat attgttttgg atatggaggt
     1201 gggcagtaaa aaaaggctgt ttgaggaagc gggcctgctt ttggaacgcg aatcctcatt
     1261 gtcccatgct gatgttttcg aatgtctttt tgcccgtgaa aaactcggtt cgaccggttt
     1321 ggggcagggt gtcgccatcc cccacggccg ccacgcgagc gtgaagcagg cgacgggcgc
     1381 gttcatccgt acgcgcgaac ccgtcggatt cgacgcgcct gacggcaaac cggtttcact
     1441 ggtttttatc ttgctggtgc cggaaaacgc aacgggcgag catttggaag tcttatccaa
     1501 actggccggc aagttttccc aaaaaagcat cagagaatcg ctgatgacgg ttgcttctgc
     1561 ggaagaagcc cgcgccatcc tgaccgaaga ataaaatatg cccagtatct ccgtccgccg
     1621 cctgtttgac gacaaccaat acaagttgca acttgcctgg gccgccggca attcgggtgc
     1681 ggacaaccgt atcggcgtag aggcggacaa gcccgtcctc gccctggtcg gacacctgaa
     1741 tttcatccat cccaaccaaa tccaagtggt cggtttggcg gagtcggaat atctgaaccg
     1801 cctcgaatcg ggggagacgg gttatcagtt cggagacctg ttcgatattt ccatgtcttt
     1861 ggtcattgtg gcaaacgatt tgccggtttc cccggggctg cgcgactact gccacaaaaa
     1921 cgacatcccc ctgttgactt ccaaactcga aagcccttat ctgatggatg tgttgcggat
     1981 ttacctgcaa cgcaccttgg cagcatcgtc cgtcaaacac ggcgtatttc tcgatgtgtt
     2041 tgaaatcggc gtgctgatta ccggacattc tggtttgggt aagagcgaat tggcattgga
     2101 actgatttcg cgcggccata gcctgattgc cgacgatgcg gtcgagctgt tccgcatcgg
     2161 tccggaaaca ttggaagggc gttgttcgcc tatgctgcgc gattttttgg aagtgcgcgg
     2221 cttggggata ctcaatatcc gccatatttt cggcgaaact tccatccgcc ccaaaaaaat
     2281 cctgcaactc attatcaatt tggtcgaggc ggacgacgag tatatgaagc agctcgaccg
     2341 gttgagcatc cgcaccgaaa ccgaatccat cctcaacgtc aacgtccgtt cggttacgct
     2401 gcccgtcgcc gtcggacgca accttgccgt tttggttgag gcggcggtac gcaattacat
     2461 tttgcagttg cgcggcaaag acagtacgcg cgaatttttg gaacgccatc agacgcaact
     2521 taaagaaaac gaacagaatc atgaaaatcg tcctgattag cgggctttcc ggctcgggca
     2581 aatccgttgc actgcgccaa atggaagatt tgggctattt ttgcgtggac aacctgccct
     2641 tggaaatgct gccgtcgctg gtgtcgtacc atatcgaacg tgcggacgaa accgaattgg
     2701 cggtcagcgt cgatgtgcgt tccggcatag acattgccca agcgcgcgag cagattgcct
     2761 atctgcgcgg actcggacac agggtggaag ttttgtttgt cgaggcggaa gaggccgtgc
     2821 tggtccgccg cttttccgaa acccggcgcg gacatccttt gagcaatcag gatatgacgc
     2881 tgttggaaag cctgaaaaaa gagcgcgaat ggctgttccc gcttaaggaa atcgcctact
     2941 gtatcgacac ttccaagatg aatgcccaac agctccgcca tgcagtccgg cagtggctga
     3001 aggttgagcg taccggactg ctggtggttt tggagtcctt cgggttcaaa tacggtgtgc
     3061 cgaacaacgc cgattttatg ttcgatatgc gcagtctgcc caacccgtat tacgatcccg
     3121 agttgaggcc ttacaccggt atggacaagc ccgtttggga ttatttggac ggacagccgt
     3181 tggcgcagga aatggttgac ggcatcgaaa ggtttgttac gcgttggttg ccgcgtttgg
     3241 aggatgaaag caggagctac gttaccgtcg ccatcggctg taccggcggg cagcatcgtt
     3301 cggtctatat tgtcgaaaaa ctcgcccgaa ggttgaaagg gcgttatgaa ttgctgatac
     3361 ggcacaggca ggcgcaaaac ctgtcgggcc gctaatcccg tcaaaccatt atgccgtctg
     3421 aaaccccgtc cgccgtttca gacggcattt caaatattga gaagaaagaa cagacatggc
     3481 aatccaatgg tttcccggcc atatgaacaa ggcaagaaaa gccatcgccg agcgtgccaa
     3541 aagcgttgat atggtgattg aaatgctgga cgcgcgtatg cccgcctcca gcgaaaatcc
     3601 actgttggcg cagctttcca aaggtaagcc caaactcaaa attttaaaca agcaagacct
     3661 tgccgaccct gaacgcacaa aggtctggct tgaccactac aacagccgcc ccgacacccg
     3721 ggccatcgcc ctcgattcct ccgaaaccgg cgcacacggc aaaatcaccc aagcctgccg
     3781 cgcgatgatt ccccaccggc aaggcataga caaacccctg cgcgttttga tttgcggcat
     3841 tcccaacgtc ggcaaatcca ccctcatcaa tggaatgata ggcaaaaaat ccgccaaaac
     3901 cggcaacgaa cccggcatta ccaaagccga acaacgcctt ttccttgccg acgacttctg
     3961 gctgtacgac accccgggaa tgctgtggcc gaaaatcatc gtcgaagaaa gcggctacaa
     4021 cctcgccgcc ggcggcgcag tcggacgcaa cgcattggac gaagaagaag tcgccctcga
     4081 acttttagac tacctccgcc gccactacct ccctatgctg caagaacgct accaagccga
     4141 caaagacccc agcagccact gggacgacaa ctcgtggctc gaatggatag ccaaaaaacg
     4201 cggcgcagtc ctcagcggcg gacgggtcaa ctaccaaaaa gccgccgaaa acatcctcac
     4261 ggacttccgc gaaggcaaaa tcggcagaat cacccttgaa acaccgaacc aatgggaaac
     4321 ttggcttaaa aaagcacgtc agaaagaagc cgaactcaaa gccattcgcg aagccagaaa
     4381 agcagagcgc aaagggcaga agccttcgga agcataaaga atgccgtctg aaaaatattt
     4441 ttcaggcagc ttctctctac tccaaccgat ttcagacggc atatccaaac ccatgccgtt
     4501 tcagcacgga tacccgtatg accgacaaaa tttctcccga cgcgctgatt gaagccgcac
     4561 tgctgaccca aaccgaaccg ctgaccgaaa aatctatgcg cgaactgtgt gtgccgccgt
     4621 tgtcgcaaga caaactgatt gatgtgttgg cgcagttgaa aacgcgttgg caggataggg
     4681 cgttgcaact ggtgcatacg caggagggct ggcgttttca gattgttcag acggcattcg
     4741 agcggctggg cagcctgcaa gaacagcgtg cgccgcgcta ctcccgcgcc gtgatggaaa
     4801 cactggcgat tatcgcctac cagcagcccg taacgcgcgg cgacatcgaa ggtatacgcg
     4861 gcgtggcggt gtcgcagaac gtgatgcaga ccttgcagga tcgggggtgg attgaagtca
     4921 tcggacatcg ggacacattg ggaaaacccg cattgtgggc aacaacggca acttttctca
     4981 gcgatttgcg cttggacggt ttggaagaac tgccgccgct gaccgaactg ggcgaactgg
     5041 ttttgcccga tttgatagaa atgccgtcta cggatgaaga agagccggaa accgtaccgt
     5101 ccgataccct gcccaactga aattccaaat gccgtctgaa acgcacattg cttcagacgg
     5161 cattgcaaca aataagcaga taaaaacaaa cactaagcaa aattaaggaa aaacttattt
     5221 ttaatttaaa aaatcttaga tataattcgt atatctaaag ttgatattgc ttttgtcggt
     5281 agaattgcta aggaatcctc acaatgcttc taacactttc tttgcgtgat tttgtcattg
     5341 tcgaaaatct gaatctggat tttcaaagcg gttttaccgt tttgaccggc gagaccggcg
     5401 cgggcaagtc cattactttg gatgcgattg gtctgctgtt gggcgataag gccgattaca
     5461 gccaagtccg cagcggcgca aaagaagcgc agttgtcggc attgttcgat atttcccatt
     5521 tgcctgcttt aaaagcagaa ttgcgtgaac aagggctgtt ggatgagggc ggggaagaac
     5581 tcagtatccg ccgcattatc gatgccaaag gcaaaagccg cagttttatc aacaatcagg
     5641 cggctacctt ggcgcaactc aaagccgtcg gcgggcagct tatcgacatc cacgggcaaa
     5701 acgaccatca ttcgcttaat caggaagctg cccagcgcga attgttggac gcatttgtgg
     5761 gcggcagggt gcaggcggaa accgtcaggc agctttatca aaactgggcc aatgcgaaaa
     5821 aagccctcca agaggcgcag gaacacgccg atgccgtcat tatcgagcgg gagcgtctgg
     5881 aatggcagtt taacgaactg aatcagttgg acattaaaca aggcgaatgg gaagctctca
     5941 gccaaagcca cgacagcctt gcccattctg ccgaattgtt gcaggccgcc gaagaagtcg
     6001 gaagcaagat tgacggcgac aacggcatcc aacgccatat ctatcaatgt caaaaactat
     6061 tggccaatct gcaaaacatc gagccgcgct ttgccgagag cctgaatatg ttggcaagca
     6121 tcgaggccga attgggcgaa atcagtgcca atatgcgcga tgtggcagga cacagtgaca
     6181 tcaaccccaa tgaattggcg gcacaggaac agcgtatggg cgaactgatg gggatggcgc
     6241 ggaaataccg gattgaaccc gaagagttgc ctgccaagtt ggcagaaatc gaagaacgcc
     6301 tgcaaagtct tcaagctgcc gctgatttgg acgcgctcga gcataatgtt gcccacaatt
     6361 ttgccgaata tcaggaagct gcccacatcc tttctgccat gcgccatcag gcggcagggc
     6421 gtttgagtag cgaaacgacc gagcatatgc aacaccttgc catgaaaggc gcgcgtttcg
     6481 acatcgtcct gttgccttcg tcgccgacgg cacacggttt ggagcaggtt caatttcaag
     6541 ttgccgctaa caaaggcaat ccgccccgcc cgctgaacaa agtcgcctcc ggcggcgaat
     6601 tggcgcgtat cagccttgcc ttacaggttg ttgccagcca atatacccaa gttcccaccc
     6661 tgatttttga tgaggtcgat accggtattg gagggggagt ggctgaaatg gtcggcaagg
     6721 cattacgtgc gttgggcaga aaacatcagg tgcttgccgt tacccatctt ccgcaagtcg
     6781 catcctgcgg agaaaaccac tggcgggtgc gcaagcacag cgagggagag caaaccgtca
     6841 gcgaaatcag tatattggat gaaatacaac ggatcgaaga ggttgcccgt atgttgggcg
     6901 gagaagttat taccgatacg acgcggcaac atgcggcaga attgctgcaa cttgcgtcga
     6961 aaaatagttt attttaaaat caatcagtta caaaaataac tgaaaataga agtctaaaat
     7021 aatagacagg actcagataa atccgtatta tcacgctttc ttaatcactt gaacaagtga
     7081 ttgtg
//
LOCUS       DAWXHA010000103         7043 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.103, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000103 DAWXHA010000000
VERSION     DAWXHA010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7043
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.103"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            95..856
                     /locus_tag="AABD07_001740"
     CDS             95..856
                     /locus_tag="AABD07_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFB2356220.1"
                     /translation="MYIVKSDYSKDAKAPRVQVLFAEDYLSISLCDLWTNINTTGLEA
                     EGNVELKNGKKPESLIETIIKLATNENDIVLDYHLGSGTTAAVAHKMNRQYIGIEQMD
                     YIETLAVERMKKVIDGEQGGISKAVNWQGGGEFVYAELSPFNETAKQQILACENSDGI
                     KTLFEGLCERHFLKYNVSVNEFSQIIEEPEFQSLALDEQKQMMLEMLDLNQMYISLSE
                     MDDEQFAGCLNDDDKALSRAFYQSVKHQAEKKDGE"
     gene            846..3620
                     /locus_tag="AABD07_001741"
     CDS             846..3620
                     /locus_tag="AABD07_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HFB2356221.1"
                     /translation="MANNKTLFDWVEDRKSMLEEMEQTDFFALPEFVSNNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNKNNIVYKTENNFIDPTHPKFLFTEKILQGDTVIPIRKVETFSQYSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHELNLVMLGDEAHHLNAQTKGKKQGELDLEKEMNE
                     RTSDAEIERKGWEHMVLELLLNKNGNPGQNVLLEFTATLPENAEVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSGTLNKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYLAFLNWVENVQADDFSFLTTFSTSLNDSNNANEQGKTRTEQALKFMQENK
                     FEFVHLANWIKQNYQKHNVIITNSETNKNKTEKTDSETEKLLNNLEAADNPIRAIFTV
                     DRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEG
                     KQPNKRKFDNDMQHELRILEELFYYTHDEQSRYITELKNELRKDGYLPEKDDDKVLAT
                     FKLKSEFADNKDFRELLIWANKKIPNPNAKSNNADSLQANPQTLSFQVHGNQLLQETQ
                     FTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFDRLQSKLD
                     IQNRNELQNKLLKDWQIEFLGLEQDKQVRPDDKLAGCLKILEMVEKHLNESDIPFIGT
                     KEFTPKKLWEIFGTPKQKWVKKDDIKTAIATQNDWYVMDNFAGTGLEEALIQFISARL
                     GDLKSQYDVHLIRNEEVFKLNNFADGEGFMPDFVLLLKDKQKSSSDSVDDFLHYQIFI
                     EPKGGHLVENDSWKEAFLKSITVEYGRDKILQKNTPHYRLIGLPFFTDHQKNGQFTEL
                     FPLGAASLEK"
     gene            complement(3769..4941)
                     /locus_tag="AABD07_001742"
     CDS             complement(3769..4941)
                     /locus_tag="AABD07_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HFB2356222.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGGDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALV
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTGHRDIQDVDASILRSKDWGRETV"
     gene            complement(5062..5292)
                     /locus_tag="AABD07_001743"
     CDS             complement(5062..5292)
                     /locus_tag="AABD07_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356223.1"
                     /translation="MVVVARVGFFIVGGIVQYLSVSVKYGGAVADCLFKWRYSLILLY
                     LFGFLNQLVMFFEERRLGRFAGKRFQNDLIYF"
     gene            5291..5737
                     /gene="iscR"
                     /locus_tag="AABD07_001744"
     CDS             5291..5737
                     /gene="iscR"
                     /locus_tag="AABD07_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HFB2356224.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPPAQINIAQIISAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            5766..6980
                     /gene="iscS"
                     /locus_tag="AABD07_001745"
     CDS             5766..6980
                     /gene="iscS"
                     /locus_tag="AABD07_001745"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HFB2356225.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WTAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILISIMWVNNEIGVV
                     QNIPAIGEICRERKIAFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELAQDTAHYLKLRDI
                     FLKGIEGIEEVYINGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
BASE COUNT         2214 a         1681 c         1490 g         1658 t
ORIGIN      
        1 agcagctagt agtagcgtaa aaaaattagc agatgaaaaa aaagaaattt gccaacaaca
       61 atttttttca gttatttcta aacgagataa attattgtat atcgtcaagt cagattactc
      121 aaaagatgca aaagcaccac gagtgcaggt tttgtttgca gaagattatt tgagtattag
      181 tttatgcgat ttatggacaa atataaatac cacaggacta gaagcagaag gaaatgtaga
      241 gttaaaaaat ggtaaaaagc cagaaagttt aattgaaacc atcattaaac tagcaaccaa
      301 cgaaaacgac atcgttctag actaccactt gggcagtggc acaaccgccg ccgtcgccca
      361 taaaatgaac cgccaataca tcggcattga acaaatggat tatattgaaa cgcttgccgt
      421 tgaacgcatg aaaaaagtaa ttgacggcga gcaaggcggt atctcaaaag ctgtgaattg
      481 gcaaggtggc ggcgagtttg tttatgccga actttcccca tttaacgaaa ccgcaaaaca
      541 acaaattttg gcgtgcgaaa attcagacgg catcaaaacg ctgtttgaag gtttatgcga
      601 acgccatttc ttgaaataca acgtcagcgt aaatgaattt agccaaatta ttgaagagcc
      661 tgaatttcaa tccttggcat tagacgaaca aaaacaaatg atgcttgaaa tgttggattt
      721 aaatcaaatg tatatttcat tatccgaaat ggacgatgaa caatttgcag gctgcctgaa
      781 tgatgatgat aaagcgttaa gccgtgcgtt ctatcaatca gtaaaacatc aagcggagaa
      841 aaaagatggc gaataataaa acgttgtttg attgggtgga agaccgcaaa tcaatgctgg
      901 aagaaatgga acagacggat tttttcgcgc tgcctgaatt tgtttccaat aatttaaaat
      961 atccgttttt tgaatggcaa aaatcggctt tagaaaattt tgtgattttt gaccgcactt
     1021 caaaattaaa ggatttcccc gacatcaaaa accgccctac ccatttgctg ttcaatatgg
     1081 caacaggtgc aggcaaaacg atgatgatgg cggcattgat tctgtattat tttgagaaag
     1141 ggtatcggca ttttttattt ttcgtcaata aaaacaatat agtatataaa acggaaaata
     1201 attttatcga tccgacgcat ccaaaatttt tatttaccga gaaaattttg caaggtgata
     1261 cggtaattcc cattcgcaaa gtggagacat ttagccaata ttcagacggc attgaaatta
     1321 aatttaccag cattcaaaaa ctatataacg atattcacac cgagcgggaa aatcaaacca
     1381 cattggcgga tttgcacgaa ttaaatcttg tgatgctggg cgatgaagca caccatttaa
     1441 acgcgcaaac caaaggcaaa aaacaaggcg aattagattt agaaaaggaa atgaacgagc
     1501 gtaccagcga tgccgaaatt gaacgcaaag gctgggagca tatggttttg gagttgttac
     1561 tcaataaaaa tggcaatccc ggccaaaatg tgctgttgga atttaccgcc acactgcctg
     1621 aaaatgctga agtgcaacaa aaatatgcgg ataaaatcat cacaaaattt ggtttaaaag
     1681 aatttttgca aaaaggttat accaaagaaa tcaatttggt atccggtacg ctgaataaga
     1741 aagagcgggt gttgcacgct ttattgtttg cctggtaccg ccatcaaatc gcgttgaaat
     1801 acggcattgc caatttcaag cctgtgatgt tgtttagaag taagacgatt gatgaatcaa
     1861 aagcggatta tttggcattt ttaaattggg tagaaaatgt gcaagcggat gatttttcgt
     1921 ttttaactac attttcaaca agcttaaacg atagcaataa cgccaacgaa caaggcaaaa
     1981 cccgtaccga acaagccctg aaatttatgc aggaaaataa atttgaattt gtgcatttgg
     2041 caaattggat taaacaaaat tatcaaaaac acaatgtcat tattaccaac tccgaaacca
     2101 acaaaaacaa aactgaaaaa accgacagcg aaaccgaaaa attgctgaac aatctggaag
     2161 cggctgataa tccgatccgt gccattttta cggtggatag attaaccgaa ggttgggacg
     2221 ttttaaattt gtttgatatt gtgcgtttgt atgaagggca aaacggtggc ggttcgaata
     2281 aaaaatcagg caaaacggct gccgccaccg tatcggaaaa gcagttgatt ggtcgcggcg
     2341 tgcgttattt tccatttgcg tttgaaggta aacagccgaa taaacgcaaa tttgacaacg
     2401 atatgcaaca tgaattgcgt atcttggaag aattgtttta ttacacgcac gatgagcaat
     2461 cccgctatat tacagaactg aaaaacgagt tacgaaaaga cggttatttg cctgaaaaag
     2521 acgatgataa ggtattggca acatttaagc tcaaatctga atttgcagat aataaggatt
     2581 ttagagagtt gttaatttgg gcgaataaaa aaatccccaa cccaaacgcc aaaagcaata
     2641 atgcagacag cctgcaagcc aatccgcaaa cgctttcatt ccaagttcac ggtaatcaac
     2701 tgttgcagga aacgcaattt acagccgatg aaaatgatga aacagcccga caaatcggca
     2761 cacaaaataa ttttactcaa accataaaaa tgagtgaaat ggagcggcat attttcaata
     2821 aagcattaca tatcaaaggg aaaaatagtc aatctttatt ccattttgac cgcctgcaaa
     2881 gcaaactcga cattcaaaat cgcaatgaat tgcaaaataa attgttgaaa gactggcaga
     2941 ttgaattttt gggattagag caagataaac aggttcgccc ggatgataaa cttgcaggct
     3001 gcctgaaaat cttggaaatg gttgaaaaac atctgaatga aagtgatata ccgtttatcg
     3061 gtacaaaaga atttacacct aaaaaattgt gggaaatttt cggcacgcca aaacaaaaat
     3121 gggtcaaaaa agatgatata aaaactgcta ttgccacgca aaatgattgg tatgtgatgg
     3181 ataattttgc cggaacgggt ttggaagaag cgttaattca atttatttca gcgcgcttgg
     3241 gcgatttgaa atctcaatat gacgttcatt taatccgcaa tgaagaagtg tttaaattga
     3301 ataactttgc cgatggcgaa ggatttatgc cggactttgt tttattgctg aaagataaac
     3361 aaaaatcttc ttccgacagc gtggacgact ttttgcatta ccaaattttc attgaaccga
     3421 aaggcgggca tttagtggaa aatgattcgt ggaaagaagc ttttttaaaa tcaatcacag
     3481 tggaatatgg gagggataag atcctgcaaa aaaatacacc gcattatcgt ttgatcggtt
     3541 tgccgttttt tactgatcat cagaaaaatg gacaatttac agagttattc cctttaggtg
     3601 cggcatcgct tgaaaaatag agtagtgcat tgcaggcagc cccgttcggc aaaacttcct
     3661 ttacaaaagg gcgttttgtc agatatttaa tcaacacatt attaaaatac aaccaaattt
     3721 taatgccgtc cgaaccatgt attcagacgg catcgtattt ttcagtatct aaaccgtttc
     3781 cctgccccaa tccttactcc tcaaaatcga ggcatcgaca tcttgaatat cgcggtgtcc
     3841 cgtaaacgcc atcgacacat ccatttcctt gtacaaaatc tccagcgcgc gcgttacgcc
     3901 ttcttcgcca tacgcaccca aaccatacag gaacgcccga cctatcatcg tgcctttcgc
     3961 acccaaagcc cacgccttca aaatatcctg gccgctgcgg ataccgctgt ccatccaaac
     4021 ttcgatgtcg ctgccgactg cggaaacaat atcgggcaag gccttgatgg cggacacagt
     4081 atcgtcgagc tggcggccgc cgtggttgga aacgaccaat gcatccgcac cgcttttcgc
     4141 cgccttttcc gcgtcttcgg gttccataat gcctttgata atcagcttgc cgccccacaa
     4201 atctttaatc cgcgccacgt cgtcccagct taagcgcggg tcgaactgtt ccgccgtcca
     4261 cgaagaaagt gaagacaaat cgccgacgtt tttggcgtgt ccgacgatat tgcggaacgt
     4321 gcggcgttcc gtgttcagca ttttcatgca ccattcgggc ttggtcgcca gattgattaa
     4381 attggcgatg gtcggtttcg gcggcgcgga caggccgttt ttgatgtctt tgtggcgttg
     4441 acccaaaacc tgcaaatcgg cagtcaatac caatgccgaa catttggcat ctttcgcacg
     4501 cttaatcagg ttttccataa attcgcggtc gcgcatcaca taaagctgaa accaaaacgg
     4561 cgcgctggtg ttctcggcaa cgtcttcaat cgagcagatg gacatggtgg acaacgtaaa
     4621 cggaataccg aacttctccg ccgcacgcgc cgccaaaatt tcgccgtctg cgtgtgccat
     4681 gccggtaaaa cccgtcggcg caatcgccac cggcattttc acatcccccc cgatcatttt
     4741 ggtttcgagg ctgcgtccct ccatattgac caataccttt tgtcggaagc ggatatcttt
     4801 gaaatccgaa gtattctccc tataagtcgt ttccgtccac gaacccgaat cgatgtaatc
     4861 gtaaaacata cgcggcattt tgcgcttggc aacgcggcgc aagtcttcga tgcaggtcat
     4921 tttgctcaaa tcacgtttca tcttgttttt ccctgtttaa cagcctgatg gaatatgccg
     4981 tctgaaactg cttgagcctt caaacggcat ttcgggcaat acccaaataa atcactaaga
     5041 tttagataat ctatatcaat attaaaaata aatcaaatcg ttttgaaacc gcttgccggc
     5101 aaaacgcccc aaccgccgct cctcaaaaaa cataactaac tgattcaaaa aaccaaacaa
     5161 ataaagcaaa atcagactat accgccattt aaacaaacaa tcggcaacag ctcccccata
     5221 cttgactgaa acactcagat attggacaat tccgcccact ataaaaaagc cgacacgggc
     5281 aaccaccacc atgagactga ccaccaaagg gcgtttcgcc gttaccgcta tgctggattt
     5341 ggcgatgaac gcgcaaaccg gcgccgtcaa actcagtgcc atcagcgaac gccaaaatat
     5401 atccctctcc tatctcgagc aattgttcgg caaactccgc cgcgccggac tggttgaaag
     5461 cctgcgcggg cccggcggcg gctacatcct cgccgcccct cccgcacaaa tcaacatcgc
     5521 ccaaatcatt tccgccgccg aagaccgtct ggacgcgacc caatgcggca gcaaagccaa
     5581 ctgccaccac ggcgcgccct gcctgacgca cgacctttgg gagaatttaa acaaaaccat
     5641 caacgactat ctcggcagcg ttaccctgca aagcatcatc gaacagaaaa acaacggcga
     5701 cggcagccgc gtcgtccaat ttacacacat ccattaaata acacccgaaa aagaaagagc
     5761 aaaccatgac cgtcaaaacc cccgtttacc tcgactacgc cgccaccaca cccgttgaca
     5821 aacgcgttgc cgaaaaaatg attccctatc tgactgaaac cttcggcaac cccgcctcca
     5881 acagccacgc attcggctgg acggcagaag aagccgtcga aaaagcccgc gccgacatcg
     5941 ccgccctgat taacgccgac cccaaagaaa tcgtcttcac cagcggcgcg accgagtccg
     6001 acaacctcgc catcaaaggt gcggcaaact tctacaaaac caaaggcaaa cacctcatca
     6061 ccgtcaaaac cgaacacaaa gccgtgctcg acacgatgcg cgaactcgaa cgccaaggct
     6121 ttgaagttac ctacctcggc gtgcaggaaa acggtttgat tgatttggaa gaactcaaag
     6181 ccgccatccg cgacgacacc atcctgattt ccataatgtg ggtgaacaac gaaatcggcg
     6241 tggtgcaaaa cattcccgcc atcggcgaaa tctgccgcga acgcaaaatc gccttccacg
     6301 tcgatgccgc ccaagcctgc ggcaaagtgc ctgtcgatgt cgaagccgcc aaaatcgact
     6361 tgctctcgat gtccgcgcac aaagtgtacg gccccaaagg catcggcgcg ctgtacgtcc
     6421 gccgcaaacc gcgcgtccgc ctcgaagccc aaatgcacgg tggcggtcac gagcgcggtt
     6481 tccgttccgg cacattgccg acccatcaaa tcgtcggcat gggcgaggcc ttccgcatcg
     6541 ccaaagaaga attggcacaa gacacagcgc actacctgaa actgcgcgac atcttcctca
     6601 aaggcatcga aggcatcgaa gaagtctata tcaacggcga cctcgaacac cgcgccccga
     6661 acaacctgaa cgtcagcttc aacttcgtcg aaggcgaaag cctgattatg gcggtgaaag
     6721 aactcgccgt atccagcgga tccgcctgca cctccgcctc gctcgaaccc agctacgtcc
     6781 tgcgcgcgct tggccgcaac gacgaactgg cgcactcatc cctgcgcatc accttcggcc
     6841 gcatgaccac cgaagaagaa gtgcaattcg cggcagaact gatcaaatcc aaaatcggca
     6901 aactgcgcga actgtcgccg ctgtgggaaa tgttcaaaga cggtattgat ctgaactcga
     6961 ttgaatgggc ggcgcattaa gattgatgtc aaacaaaggc tgtctgagaa agaataccat
     7021 gaaagttaaa attattaatt tgc
//
LOCUS       DAWXHA010000104         7024 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.104, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000104 DAWXHA010000000
VERSION     DAWXHA010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7024
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.104"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(957..1640)
                     /locus_tag="AABD07_001746"
     CDS             complement(957..1640)
                     /locus_tag="AABD07_001746"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HFB2356226.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAE
                     KYGDEQVRIWRRSYDTLPPLLDKDDAFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            1789..4092
                     /gene="parC"
                     /locus_tag="AABD07_001747"
     CDS             1789..4092
                     /gene="parC"
                     /locus_tag="AABD07_001747"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HFB2356227.1"
                     /translation="MNTQPHASHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDRSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFMPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDRLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRVVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQFGDARRTL
                     VEEAGRAVLTQTAADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSSGRTYSIDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSEPEILIESEGRRGAAHKDRLPV
                     ALIEAKRGKKGRLLPISGSLKQLSSPK"
     gene            4112..5836
                     /locus_tag="AABD07_001748"
     CDS             4112..5836
                     /locus_tag="AABD07_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HFB2356228.1"
                     /translation="MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYLWLAIACWLIFFSTLNPQWQWQWQALRIPSFSAVADITMIGVLTY
                     LFGGIDSGFGILILPFVGSSCLLSYGRYPLLYASYASILLIFNALADSNINMYPLILD
                     AKTVTNTFVVVAGSYFVAMIASLSVRYIDRAGKLAHENHVAYRRIRGLNQIVLNRVQE
                     AVVVINVEHQTILFNKKAKDLLPMLEIGQHTSLFDPVAILWDKTSSRTFEHYIDTPEL
                     TARIRAVPMNKKQNKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIR
                     HADGGTLFLDEVADLPLSMQVKLLRAIQEKAVRRIGDATEQPVDVRIVCATHKNLEAL
                     VESGAFRQDLYYRLNVVSLNMPSLREMRENLKLPTPYLLYKHSHNNRPYTLSPAAQQM
                     LLNYSYPGNFRELENILERAVALCVGYTVQIDDLQIQDVHHKPVRTETAVPVADTLPS
                     ETAAAPSRLLPFDPDTMQIQDYLDKIERDIIGQVLKQTEGNRTQAAKRLGISFRSMRY
                     RMERLNID"
     gene            5936..6688
                     /locus_tag="AABD07_001749"
     CDS             5936..6688
                     /locus_tag="AABD07_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal RNA small subunit methyltransferase J"
                     /protein_id="HFB2356229.1"
                     /translation="MTDILIDDTATEAVRTLIRAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSNVIVDFTSGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG
                     KPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGADKG"
BASE COUNT         1689 a         2087 c         1734 g         1514 t
ORIGIN      
        1 actattttag tagttttacc attagaaaaa ggatatgaat ggaattgcct tgaggtagaa
       61 gtactatccg ctgctcaatc tctagcaaat atctattgca acaaggttcg cctcatagat
      121 ggtcatgttt gggaggaata aatgaaaaag cgtagttggt aatttttagt tgcgcagggt
      181 gggcttcagc ccaccgtttt ttcttcattt tgggttgttg attggtgggc taaagcccac
      241 cctacgatta ctaaaatccc gtcattcccg cgtagagcgc atcataataa ggcgggaatc
      301 cagacctttc ggtgcgaaaa cttatcggat aaaacggttt cccctgcatc ctggattccc
      361 actttcgtgg gaatgacggg atataggttt ccctacggac gtgttcagat tcctgccttc
      421 gcgggaataa cggcggagca gtttctgctt ttccaataaa tgaccgtaac ttaaaatccc
      481 gtcatccccg cgaaagcaaa aatcctgcct gtcggatttc ggttttttcg ggaaactgat
      541 gaatcgtcat tcccgcgcag gcgggaatcc agaacgcggg acggcggcaa tattcaaagg
      601 ttgtctgaaa attcagaggt tccagattcc cgccttcgcg ggaatgacag cggagcagtt
      661 tctgcttttc cgataaatga ccgcaaccta aaacccatcc ttcacacgaa aacagaaaaa
      721 caaaaaccta aaatcccgtc attcccgcga taacagttgc gtaattgcgt agggtgggct
      781 tcagcccacc gtttcttcat ttttgcttgt caattagtgg actgaagccc accctgcggt
      841 tactgtttct tctttttcga ttattaattg gcaggctgaa gccctcccta cgtttaccgt
      901 caaaaatgcc gtctgaaatg ctcaagccct cagacggcat tttttatttc gcacccttac
      961 aggtaaaatt tctcgatgac tttcaggttg tcgtctaatt tgtacaccag cggctggccg
     1021 gtcgggattt ccaagcccat gatgtcttcg tcggaaatgc cctcgatgtg ttttgccagc
     1081 gcgcgcaggg agttgccgtg cgccgctacc aagacgcgtt tgccgctcaa aatcgcgggg
     1141 gcgatttggt cttcccaaaa cggtaatacg cgctccagcg ttactttcag gttttcgccg
     1201 tcgggtacga catcggcagg cagatgggca tagcgacggt ctttgtgtgc ggaaaacgcg
     1261 tcgtctttgt ccaaaagcgg cggcagggtg tcgtagctgc gccgccagat gcggacttgc
     1321 tcgtcgccgt atttttcggc ggtttgtttt ttgtccaaac cttgcagtcg gccgtagtgg
     1381 cgttcgttca gcctccatgt tttgatttgc ggtacgaaca gttggtcgga ttcttccaaa
     1441 acgatgttgc aggtcttaat cgcgcgggtc aggacggatg tgaaggcgat gtcgaactca
     1501 tagccgtttt ctttcagttt tttaccggcg gcggcggcct cggcaagccc ctgctcgctc
     1561 agcttcacgt cgcgccagcc tgtaaacagg tttttcgcgt tccattcgct ttgtccgtgg
     1621 cggataaata ccaattccat atcgtctcca atgtgtgaaa gtgggaaagc tttatttata
     1681 acatattttc acatttcccg tatttgattc agattcaggc acggcgccca ctatggtttg
     1741 ccattttgat ttacaataat gtcctttgct ttacattccg catacacaat gaatacgcaa
     1801 ccgcacgctt cccataccga ttccaacacg ctgatgctcg gccgatacgc cgaacgcgcc
     1861 tatctcgaat acgccatgag cgtggtcaaa ggccgcgcgc tgcctgaagt ttcagacggc
     1921 caaaagcccg tgcagcggcg cattttgttt gccatgcgcg atatgggttt gacggcgggg
     1981 gcgaagccgg tgaaatcggc gcgcgtggtc ggcgagattt tgggtaaata ccatccgcac
     2041 ggcgaccgtt ccgcctatga ggcgatggtg cgcatggctc aggattttac cttgcgctac
     2101 cccttaatcg acggcatcgg caacttcggt tcgcgcgacg gcgacggggc ggcggcgatg
     2161 cgttacaccg aagcgcggct gacgccgatt gcggaattgc tgttgtccga aatcaatcag
     2221 gggacggtgg attttatgcc gaactacgac ggcgcgtttg acgagccgct gcaccttccc
     2281 gcccgcttgc ctatggtgtt gctcaacggc gcgtcgggca tcgcggtggg tatggcgacc
     2341 gagattccgt cgcacaattt gaacgaagtc acgcaggcgg cgattgcact gttgaagaaa
     2401 ccgacgctgg aaaccgccga cctgatgcaa tatattcctg ctcccgattt tgccggcggc
     2461 ggtcaaatca tcacgccggc ggacgaattg cgccgtattt acgaaaccgg caagggcagc
     2521 gtgcgcgtgc gtgcgcgtta tgaaatcgag aaattggcgc gcggacagtg gcgcgtcatc
     2581 gtaaccgaac tgccgccgaa cgccaattcc gccaaaatcc ttgccgaaat cgaagagcaa
     2641 accaacccga aaccgaaagc gggcaagaag cagctcaacc aagaccggct taataccaaa
     2701 aagctgatgc tggatttaat cgaccgcgtg cgcgacgagt ccgacggcga acatcccgtg
     2761 cgccttgtat ttgaacccaa atccagccgc atcgataccg ataccttcat caacacgctg
     2821 atggcgcaaa cttcgctgga aggcaatgtg tccatgaact tggtgatgat gggtttggac
     2881 aaccgccccg cgcagaaaaa cctgaaaacg attttgcagg aatggctgga tttccgcgtc
     2941 gttaccgtaa cacgccgtct gaaattccgt ttaaaccaag tggaaaaacg gctgcacatc
     3001 ctcgaaggcc gtctgaaagt ctttctgcac atcgacgaag tgattaaagt catccgcgaa
     3061 tcggacgacc cgaaagccga tttgatggcg gcattcgggc tgaccgaaat ccaggccgaa
     3121 gacattttgg aaatccgcct gcgtcagctg gcgcgtttgg aaggtttcaa actcgaaaaa
     3181 gaattgaacg aattgcgcga agaacaaggc cgtctgaaca tccttttggg cgacgaaaac
     3241 gaaaaacgca agctgattat caaagagatg caggcggaca tgaagcagtt cggcgacgcg
     3301 cgccgcacgc tggtggaaga ggccggacgc gccgtgctga cacaaaccgc cgccgacgaa
     3361 cccatcacgc tgattttgtc ggaaaaaggc tggatacgca gccgtgccgg acataatctc
     3421 gatttgagcc aaaccgcgtt caaagaaggc gaccgcctca aacaaaccct tgaaggccgc
     3481 actgttttac ccgtcgtcat cctcgattca tcgggcagaa cctactcgat cgatgccgcc
     3541 gaaatccccg gcggacgcgg cgacggcgta ccggtttcct ccttaatcga gttgcaaaac
     3601 ggcgcgaaac ccgtcgcgat gttgacagga ttgccggaac aacattattt attatcaagc
     3661 agcggcggct acggctttat cgccaagctg ggcgatatgg tcggacgcgt gaaagcgggc
     3721 aaagtggtga tgaccgcaga cagcggcgaa accgtcctgc cgccggttgc cgtctatgcc
     3781 tcctcgttca tcaaccccga ctgcaaaatc attgcagcca ccagtcaaaa ccgcgccctc
     3841 gccttcccca tcggcgaatt gaaaattatg gcgaaaggca aaggactgca aatcatcgga
     3901 ttaaacgccg gcgaatcgat gacgcatacc gccgtttctt ccgagccgga aatcctgatt
     3961 gaaagcgaag gcaggcgcgg cgcggcgcac aaagaccgcc tccccgtcgc cctgattgag
     4021 gcaaaacgcg gcaaaaaagg cagactgttg cccatatcgg gcagcctgaa acagctttct
     4081 tcccccaaat aaacccggtt ccgcacatat tatggtgatt tccaaccccc gcgaacttga
     4141 aaaactcaaa gaccggattc ccaatctgat caacatcatc cgcgtcgcca tcgttttccc
     4201 gctgatgatt atgcacatcc tcgggctgga aaccggcagc cgtgcgaacc tgcacgcctc
     4261 atggacggcg tgggcgtttt acttgtggct tgccattgcc tgctggctga ttttcttttc
     4321 caccctcaac ccgcaatggc aatggcaatg gcaggctttg agaataccga gtttcagcgc
     4381 cgtggccgac atcacgatga tcggcgtgct gacctacctg ttcggcggca tcgattcggg
     4441 gttcggcatc ctgatcctgc ccttcgtggg cagctcctgc ctactcagtt acgggcgtta
     4501 tcccctgctc tatgccagct atgcatccat cctgctgata ttcaacgccc ttgcagacag
     4561 caatatcaat atgtatccgc tgattctgga tgcaaaaacc gtcaccaata ccttcgtcgt
     4621 cgtagccggc tcctatttcg tcgctatgat tgcctcgctg tcggtcagat acatcgaccg
     4681 tgccggcaaa cttgcccatg aaaaccacgt cgcctaccgc cgtatcaggg gcttgaacca
     4741 aatcgtgctc aaccgcgttc aggaagcggt cgtcgtcatc aacgtcgagc atcagaccat
     4801 actgttcaat aaaaaggcaa aagatctgct ccccatgctt gaaatcggac agcatacctc
     4861 cctgttcgac cctgtcgcca tcttatggga taaaacatcc tcacgcacct tcgaacacta
     4921 tatcgacacg cccgaactga ccgcccgcat ccgcgccgtg ccgatgaaca aaaagcagaa
     4981 caagctgctc atcctctata tccgcccgca aagcgaaatt caggcggaag ccctgtccgt
     5041 caaacttgcc gcgctcggac aactgaccgc caaccttgcc cacgaaatcc gcaacccgat
     5101 gtccgccatc cgccacgccg acggcggcac tttatttttg gacgaagtgg ccgacctgcc
     5161 cctttccatg caggtcaaac tcttgcgcgc gattcaagaa aaagccgtgc gccgtatcgg
     5221 cgacgcgacc gagcagcccg tcgatgtccg catcgtctgc gccacccaca aaaacctcga
     5281 agcccttgtc gaaagcggcg cattccgcca agacctgtat taccgtctca atgtcgtcag
     5341 cctcaatatg ccgtccctgc gtgaaatgcg cgaaaatttg aagctgccca ccccctacct
     5401 cctgtacaaa cacagccaca acaaccggcc ctacacactc tcccccgccg cgcaacagat
     5461 gctcctgaat tacagttatc cgggcaattt ccgcgaactc gaaaacatcc tcgaacgcgc
     5521 cgtcgccctg tgcgtcggat atacagtgca aatcgacgac ctgcaaatcc aagatgtgca
     5581 ccacaaaccc gtccggacgg aaaccgccgt ccccgttgcc gataccttgc cgtctgaaac
     5641 agccgccgca ccgtcccgcc ttctcccgtt cgaccccgat accatgcaga tacaggacta
     5701 tctcgacaaa atcgaacgcg acatcatcgg acaagtcctc aaacaaaccg aaggcaaccg
     5761 cacgcaagcc gccaaacgct tgggcatcag cttccgctct atgcgctacc gtatggaacg
     5821 cctcaacata gactgacaaa cggcatccgc accatctccg cccacccgaa aaaatgccgt
     5881 ctgaaacggc acggggaagc gggttcgccc cacgaccgaa cggacacaat acaccatgac
     5941 cgacatcctc attgacgata ccgccaccga agccgtccgc accctgatac gggcattccc
     6001 cctcgtgccc gtttcccaac cgcccgaaca aggcagttac ctccttgctg aacacgatac
     6061 cgtcagcctc aggcttgtcg gggaaaaaag caacgtcatc gtcgatttta cctccggcgc
     6121 ggcacaatac cggcgcacaa aaggcggagg agaactcatc gccaaagccg tcaaccacac
     6181 cgcgcacccc accgtatggg atgcaaccgc aggattgggg cgcgacagct tcgtcctcgc
     6241 ctcgctcgga ctgaccgtta ccgccttcga gcaacatccc gccgtcgcct gcctgctttc
     6301 agacggcatc cgccgcgccc tcctcaatcc cgaaacgcaa gacaccgccg cgcgcatcaa
     6361 cctccatttc ggcaatgccg ccgaacaaat gcctgccctt gttaaaacac aaggcaaacc
     6421 cgacatcgtt tatctcgacc cgatgtatcc cgaacgccgc aaaagtgccg ccgtcaaaaa
     6481 agaaatggct tatttccacc ggcttgtcgg cgaagcgcaa gatgaggtcg tcctccttca
     6541 taccgcacgc caaacggcaa aaaaacgcgt cgtcgtcaaa cgcccgcgcc tcggcgaaca
     6601 ccttgccgga caagcccccg cctaccaata caccggcaaa agcacccgct tcgacgttta
     6661 cctgccctac ggagcggaca agggataacg cccataaaac aagacaccga aaaatttgcc
     6721 gttcttatgc aaacgagaaa ccggtttttg cgtttcgact gttttggata agtcatcaca
     6781 ccttaaagtt tgtcattccc acggaagtgg gaatccggaa atgaaaggca acaggaattt
     6841 atcgtaaatg actgaaaccg aacggactag attcccgcct gcgcgggaat gacggggcgg
     6901 gaggatgccg tctgaaattc cgtcattccc gtgaaaacgg gaatctagaa cttctgattt
     6961 ttcagacgac ttttgaagat tgccgctacc caatgatctg gattcccgct tttgcgggaa
     7021 tgac
//
LOCUS       DAWXHA010000105         6594 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.105, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000105 DAWXHA010000000
VERSION     DAWXHA010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6594
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.105"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(91..1194)
                     /locus_tag="AABD07_001750"
     CDS             complement(91..1194)
                     /locus_tag="AABD07_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1845 domain-containing protein"
                     /protein_id="HFB2356230.1"
                     /translation="MQQQCFMKLFLITYKDLKMEFAKQRYIIKPGAIHVAQQFDLKVT
                     TKQSPFSDGYDMARAALALGDKVNQKLTEDDEQFQQWEEFKAHELLLKQHLQKETGRK
                     HHLVWGEYEILSSENDRFKNIGSLTSSGDDGFFMHTKQGIRMWEGNNNKKNGPRWPGI
                     RYGLTLSNELFGMAMSDNPYAQSRLLQIEKQMSEIEEFFETVKKQVHAQIDSLAAAGM
                     KITLIQNNNPVHIRLNVLRAYGFKLVKLLRDYDSFVCAVKTLNIKGMMANKQCNDTLY
                     NGGRMMRKLLNDLYIAVMETRAIKSIRRDSLLDPEQLSKLKSAVEQEILPRIPLSVWV
                     YESQPSLVYIQRKMNQEDLNKLVDIVRDNGLSG"
     gene            complement(1332..2849)
                     /locus_tag="AABD07_001751"
     CDS             complement(1332..2849)
                     /locus_tag="AABD07_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356231.1"
                     /translation="MVTATKLPPPKVFNSELTQCWQALQGGRRVAIYRCLIDITGSLK
                     TAAMLSQLIYWTRVSKEVAERDGWIFKSIAQMEAETGLTVREQRTCKNKLLETNLIQT
                     CRKGVGAALAIKVNLDAIAELIAKSSGTDDQLALTLADLQNTSSLYFRKHFSKRIAYH
                     RDLVSITGCINSAVLLSCVLNDAVGLVSQNPHLQRHAFATLTAADWEERTSLSYKSQL
                     TARNRLKNLNLIYERNFLASRRIFTLVNGHDIVISIKKLLAGKQDDGFSPYNSKKREI
                     LSLAERAKCDWRKGPNGLDKGFQSGFEGDAPLFPSMTSGSVEREYSDVSNWNFKKGHS
                     GKFISVDWGSSELPNRQIIYYINYKGVYNYNYMTVEPNKPRSSEQDHVVVVDDVDLIY
                     PKLFNVQMRQQADLIFTKHLSKSSWALRQEILDEIQGQKKEVTSPLGLLINLCRCASQ
                     GNFTALVAPQVRFQREQDQKLQAYLEKQNNQKQDSLDAMDVELARNNLRKFYSKR"
     gene            complement(2849..3604)
                     /locus_tag="AABD07_001752"
     CDS             complement(2849..3604)
                     /locus_tag="AABD07_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356232.1"
                     /translation="MSMYMDFSTSYDYETGFVPSKNMSTDNFIRSLVALWEEPATYVR
                     QFAQAVGSVSEGYFLSWFVEKCLPGEWVSLNNDLLFNEAGITAKQWRNIRNSLLQKGI
                     LLNRRTVAPTESQFTLNDALFEDLVSKHGKSDVLDMVSPPISINKLHLKTLADRGLAF
                     VSILYLSFLQSEAEYQDLSKRGDWSPWTHAAEKHVFYSTMLSRRQQERAIAELTSFGL
                     IESCVDGMPAARRCRYSLKMLADLTSEYLNGCV"
     gene            complement(3601..4206)
                     /locus_tag="AABD07_001753"
     CDS             complement(3601..4206)
                     /locus_tag="AABD07_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356233.1"
                     /translation="MRSKPLISNPIYRLFNTDPVYTNLALTRLASAPNTPRESSYNAL
                     VAREHEDVLNTLKRMNPKRIEKLASMCPDVVTYSIDLKVLKSKISEMEHYEQRFMEQM
                     QRLKWMLEHKASNLMIMNLCSLISKAEIKKLRIEMNIPVVKGRIVMPSIDVRVRVLKA
                     WSKSEKEPDLFIRYQLLIDEFPDYSLAQLHSIINDVKFFGV"
     gene            complement(4196..5716)
                     /locus_tag="AABD07_001754"
     CDS             complement(4196..5716)
                     /locus_tag="AABD07_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HFB2356234.1"
                     /translation="MNLDQNKATLSLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEID
                     FFDKNPRRLHDVSSYAAIKESIRSSGIQQPVHVTQRPGESKYVLAQGGNTRLKILCEL
                     LEETGDNRFRMMPCIYIPYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDE
                     SDSGKLSLRELEVMFSDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKL
                     HSTLFSISKSIQLDDSFQYLWSDVLEQWHNQYSATELDVHELYQFVLDRFKFEYGSDA
                     FSETENSSDKDKIETAVKQDVNLHQKEVSENNTESKDSDMEFVPAKVNGTKADAEDEP
                     KEAEPITLEQTSKKLFSAVRKLLAKVSLSDCFKIHKDFPYGWYVEYPAFEHISASSAG
                     NAIYAIDVLHEEAGNVFTFLWKLSGIDTFMFDVGDSSNPLLTLKSDSKLRIAYEDPDK
                     YDEYTNCGIGNKENIIASLLNWQTNTSHEFHANIVEILSLSTQYNNLRKTGAKSEE"
     gene            complement(5719..>6594)
                     /locus_tag="AABD07_001755"
     CDS             complement(5719..>6594)
                     /locus_tag="AABD07_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFB2356235.1"
                     /translation="APVILSAAATKGGVGKTTLIANVSAVLADIGLRVLMIDCDVQPS
                     LSKYYPISHRAPNGIVELLLGENTEEIIRSTISNTVFPNLDIVISNNISAFVETEVTS
                     RPDRAFLLKSKLHSQYIQNNYDVVLIDTQGAVGPLLDTAAFAATCLLCPIMPEVLSAR
                     EFLTGTQELLKRLQKGEAMRIPMPQLRAIIYAQDRTNDAKFIASSIKDFFSNTLDDRR
                     KLLSVAVPAAKAYKEATTLRVPVHCHERKQLGKMLPAYEIMHRIVYEIFPGIEQKNLR
                     GSCFNDMASLLQEEV"
BASE COUNT         1933 a         1454 c         1256 g         1951 t
ORIGIN      
        1 tcatatcaca tcataaaaaa atccatacaa acaagggcca atcaatacca tcttaaaact
       61 cgattgtaac cccacgttcc aatttcacaa ctagcccgat aatccattgt cacgaacaat
      121 atcaaccaac ttattgagat cctcctgatt catttttctc tggatataaa ccaaagaggg
      181 ttgtgattca tacacccaaa cagacaatgg aattctaggc agaatctctt gctcaacagc
      241 agatttcaac ttcgacaact gctctgggtc aagcagactg tcacgtcgaa tgctcttgat
      301 agccctggtc tccattaccg caatatataa atcattcagt agctttctca tcatccgacc
      361 gccattatac aacgtgtcat tacattgttt attagccatc atgcctttga tattaagtgt
      421 cttaacggca catacaaaac tatcgtaatc ccgcaacaat ttaaccagtt tgaaaccata
      481 agcccgcaat acattcaatc tgatatgaac agggttattg ttctgaatca aggttatctt
      541 catacctgca gcggccaaac tatcaatctg agcatgaacc tgttttttca cagtctcaaa
      601 aaattcctca atttcggaca tctgtttttc aatctgcaat aaccgacttt gggcataagg
      661 attatcggac atagccatac caaacaactc gttactgagt gtcagaccat atctgattcc
      721 cggccaacgt gggccgttct tcttgttgtt attgccctcc cacatacgga taccttgctt
      781 ggtatgcata aaaaaaccat catcaccgga agaggtcagg ctgccaatat ttttaaaccg
      841 gtcgttctca gaagaaagaa tttcatactc cccccaaact aagtgatgct ttcgacctgt
      901 ctccttttgt agatgttgct tgagcagcaa ttcatgtgct ttaaactctt cccactgttg
      961 gaactgttcg tcatcctcag tcaacttttg attgacctta tcccccaaag ccaaagcagc
     1021 acgagccata tcgtaaccgt cactgaaagg tgactgtttt gttgtgactt tgagatcaaa
     1081 ttgctgtgca acatggatcg caccaggttt gatgatatat ctttgttttg caaattccat
     1141 ttttaaatcc ttataagtta ttaaaaagag cttcataaag cactgttgtt gcatgtcaga
     1201 ggctaattag tcatgtacac catcatatct gtcctttgcc gatgactgta acgccccgtt
     1261 acatccgctt cgaagtaata gatttattcg tctttcaaaa attcatcaaa aatatttttt
     1321 taaattaaat tttatctttt ggagtagaac tttcttaaat tattgcgggc aagctcgaca
     1381 tccatggcat ctaatgagtc ctgtttttgg ttattctgct tttcaagata agcctgtaat
     1441 ttctgatcct gctcacgctg gaatctaacc tgtggggcga caagagcagt aaagttacct
     1501 tgcgaagcgc agcggcatag gttaatcaaa agaccaaggg ggctagtaac ttcttttttc
     1561 tgtccctgga tctcatccaa gatttcctgc ctcaaagccc aggaactttt tgagagatgt
     1621 tttgtaaaaa tcaaatccgc ctgttgacgc atttgcacat taaaaagttt tggataaatc
     1681 aaatcaacat catcaaccac taccacatga tcttgttcgg aagaacgtgg tttgttgggt
     1741 tcaacagtca tgtagttgta gttataaacc cctttgtaat ttatataata aataatctgc
     1801 cgattcggca attctgaact tccccaatcg acacttatga atttcccact atgacctttc
     1861 ttaaaattcc aattcgacac atccgaatat tccctttcga cacttccgga tgtcatactt
     1921 gggaataggg gggcatcacc ctcgaaaccg ctctgaaacc ctttatccaa tccatttggc
     1981 cctttccgcc aatcacattt ggccctttcc gccaaactga gaatttcgcg ttttttggag
     2041 ttatatggac taaagccgtc gtcctgtttg ccagctagaa gttttttgat ggatataaca
     2101 atatcgtgac catttaccag ggtaaaaata cggcggctgg ccaagaaatt tctctcataa
     2161 atgagattta aattcttcag cctattgcga gctgtcaatt gagatttata agagagagag
     2221 gttctttcct cccaatcagc agcagtcaaa gtagcaaagg catgacgttg taaatgtgga
     2281 ttttgagaaa ccaaaccaac cgcatcattt aacacacacg acaataatac agccgagttg
     2341 atacagcctg taatagaaac caggtctcgg tgataagcaa tccttttaga aaagtgtttt
     2401 ctaaaataca gggaacttgt gttctgtaaa tcagccagcg taagtgcaag ttgatcgtca
     2461 gtaccgctcg atttagcgat caactcagct atggcatcca agttcacttt gattgctaaa
     2521 gcagccccca cacctttacg gcatgtttga ataaggtttg tctcaagaag cttgttttta
     2581 caagtgcgct gctctctcac tgtcaaacca gtttcagctt ccatctgagc aatagacttg
     2641 aaaatccaac catcccgttc ggcaacctct ttgcttactc ttgtccaata gattaactga
     2701 gaaagcattg cagcagtctt cagagagcct gtaatatcaa ttaaacatcg atagatggca
     2761 acccttcgac caccttgcaa tgcttgccag cattgtgtca gttcagagtt aaatactttg
     2821 ggagggggta atttggtggc ggtaaccatc acacacatcc gttcaaatat tcagaagtaa
     2881 gatcagcaag cattttcaag ctgtatctac aacgtcgcgc tgctggcata ccatcaacac
     2941 agctctcaat caaaccaaaa gaggttaatt cggcaatagc tctttcctgt tgccgtcttg
     3001 acaacattgt tgaataaaaa acgtgctttt cagctgcatg agtccaagga gaccagtcac
     3061 cacgcttact caaatcttga tattcagctt cactttgaag aaacgacaaa tacaaaatgg
     3121 atacaaaagc aagacctcta tcggctaatg tcttcaggtg aagtttatta atcgaaatag
     3181 ggggcgaaac catgtcaagt acatctgatt taccatgttt acttaccaaa tcctcaaaaa
     3241 gagcatcatt caatgtgaat tgtgattcgg ttggcgctac ggttctccga ttaagcaaaa
     3301 tacctttctg cagaaggcta ttgcgaatat tccgccactg ctttgcggta atacctgctt
     3361 cattaaacaa cagatcatta ttcaggctta cccattcgcc aggcagacat ttctcgacaa
     3421 accaactcaa aaaatatccc tctgaaacag aaccgaccgc ctgagcaaac tgacgcacat
     3481 atgtggccgg ttcctcccac aaggcaacca agctacggat aaagttatcg gttgacatgt
     3541 tcttagatgg tacaaaacca gtctcataat cataggaagt agagaaatcc atatacatac
     3601 tcatactcca aagaacttta catcgttaat tattgaatgt aattgggcaa ggctataatc
     3661 ggggaattca tcaatcaata gctggtatct aataaacaaa tctggctctt tttccgactt
     3721 actccatgcc ttcaataccc tgacgcgaac atcaatagat ggcatcacaa tgcgcccttt
     3781 aacgacagga atattcattt ctatacgcaa ttttttaatt tccgccttag aaattaatga
     3841 acatagattc ataatcatca gattgctggc cttatgttct aacatccatt taagacgctg
     3901 catctgttcc ataaaccttt gttcgtaatg ttccatttct gaaattttgc tttttaaaac
     3961 cttcagatca atggagtagg tcacaacatc aggacacatg gatgctaatt tctcaatccg
     4021 cttcgggttc attcgtttga gcgtgttcaa aacatcctca tgttcacgag caaccaaagc
     4081 gttataagaa gattcacgcg gcgtatttgg tgcggatgcc aaccttgtaa gtgcaagatt
     4141 ggtataaacc ggatccgtat taaaaagtct ataaatggga ttactaatta aaggcttact
     4201 cctcactctt agctcccgtt tttctcaagt tgttgtactg tgtgctcaga gataatattt
     4261 ctacgatatt ggcgtgaaat tcatggctgg tattagtttg ccaattcagt aaagaggcaa
     4321 taatgttctc tttattacca attccgcagt tcgtatattc gtcgtactta tcggggtcct
     4381 cgtaggcaat acgaagcttt gaatcacttt taagtgtcag caggggattg gaactatcac
     4441 caacatcaaa cataaaggtg tcgattccac taagcttcca taagaatgtg aaaacatttc
     4501 cggcttcttc atgcaaaaca tcaatagcat agatggcatt tccggcactt gatgctgaaa
     4561 tatgctcaaa agccggatat tcgacatacc agccgtatgg aaagtcctta tgaatcttaa
     4621 agcaatcgga cagactcact ttggctaaca gtttacgaac agcagaaaac agttttttgc
     4681 tggtttgctc caaagtaatc ggttcggctt ctttcggctc atcctctgca tcagctttag
     4741 taccatttac tttggctggc acaaattcca tatccgaatc ctttgactca gtgttgtttt
     4801 ccgatacctc tttttgatgc aaattgacat cttgtttgac ggctgtttca attttgtctt
     4861 tatcagaaga attttctgtt tcagaaaagg cgtcagagcc atattcaaat ttaaatctgt
     4921 cgagcacgaa ctgataaagc tcatgcacgt ctaactctgt tgcagaatat tggttatgcc
     4981 actgctccag tacatccgac cacaaatatt ggaaagaatc gtccaactga attgatttag
     5041 aaattgagaa tagggtagag tgaagttttt taatttcttc tacttttgca tgggaaagtt
     5101 tgaatgcgta ttcttgcagc tcttgtaaat tatcggaggc aaaaaagaat aatcctaaag
     5161 tcttatgaga aaccgtaagg cctttatcag aaaacatcac ttccagttcg cgcaaagaaa
     5221 gtttccctga gtcagattca tcttggaaaa tatcgcggat ttcggcatat ttacaggcct
     5281 tatcccaaaa acacatttca gcacggagtt cattttcaac aagatgcgca acctgcaatg
     5341 tagtttcgtc agagtagggg atgtaaatac aaggcatcat acggaagcgg ttatcaccag
     5401 tttcttccaa aagttcgcac aagattttga gacgggtatt accaccctgt gccagtacat
     5461 atttactttc accaggtctc tgggtaacgt gtacaggttg ttgaatacct gaagaacgga
     5521 tggactcttt gatggccgcg tagctggaaa catcatgtaa acggcgaggg tttttgtcaa
     5581 agaaatcgat ttcgctgatt ggcaacgaca ttaacatgcc ccgagaagga gtatcctctt
     5641 ggccaaaact catatttgtc tgtgcagggg taccgatgtg caggctcaag gttgctttat
     5701 tttggtccaa attcatgatt acacctcctc ttgcagcagg ctggccatgt cattgaaaca
     5761 gcttccacgc aggttcttct gttcgatacc agggaaaatc tcataaacaa tacggtgcat
     5821 gatttcataa gcaggcagca tctttccaag ctgtttacgc tcatgacaat gaaccgggac
     5881 tcttaaagtt gtagcttcct tatatgcttt ggcagcagga actgctacgc ttaacaattt
     5941 acgtctgtca tctagagtat tgctaaagaa atctttgata gaagatgcga tgaatttcgc
     6001 atcattggta cgatcttgtg cgtagatgat ggctcgtaat tgaggcatcg ggatacgcat
     6061 tgcttcgcct ttttgcagac gctttagaag ttcttgcgta ccggtaagga actcacgggc
     6121 actcaaaact tcgggcataa ttgggcaaag caggcatgta gcagcaaatg ctgcggtatc
     6181 taagagagga ccaactgcac cctgagtatc gattaaaacc acatcgtagt tattctgtat
     6241 gtattgggaa tgcagtttgc ttttgagcaa gaaggcacgg tcgggacgag aggttacttc
     6301 agtctcgaca aaagcagaaa tgttattgga aataacaatg tctaaattcg gaaaaacggt
     6361 attggaaatt gtcgagcgga tgatttcttc ggtattttca ccgagaagta attcaacaat
     6421 accatttgga gcgcggtggc ttattggata gtattttgac aatgatggct gaacatcgca
     6481 gtcaatcatt aagacacgca gtccgatatc agcgagaaca gcagagacat tagcaatgag
     6541 tgttgtttta cctacgccac cttttgtagc ggctgcagac aatattacgg gtgc
//
LOCUS       DAWXHA010000106         6467 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.106, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000106 DAWXHA010000000
VERSION     DAWXHA010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6467
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.106"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            348..659
                     /locus_tag="AABD07_001756"
     CDS             348..659
                     /locus_tag="AABD07_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HFB2356236.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRHTKHISKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRTLPYAEQKIQCRAAYEAFDDFDGGRFR
                     R"
     gene            complement(922..1689)
                     /locus_tag="AABD07_001757"
     CDS             complement(922..1689)
                     /locus_tag="AABD07_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HFB2356237.1"
                     /translation="MSSNKASFFTRLRRLCRLTVWLFKTGKNLRGIDGGCPKSRNRAV
                     IALGKGALAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVAGDADVAV"
     gene            complement(1777..2604)
                     /gene="mutM"
                     /locus_tag="AABD07_001758"
     CDS             complement(1777..2604)
                     /gene="mutM"
                     /locus_tag="AABD07_001758"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HFB2356238.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAV
                     KLALMDNTVVVGVGNIYANESLFRAGISPHRPANRLKKKECAVLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCLRCGGLVVKETLGQRGTFYCTNCQK"
     gene            complement(2657..3322)
                     /locus_tag="AABD07_001759"
     CDS             complement(2657..3322)
                     /locus_tag="AABD07_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HFB2356239.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFNRYVASYRFSGMCAVQVGGQWL
                     SLSEDIVCVPRDMSMSAENMALADVFADMLLLPHTLECGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFCRWFDGVRLPEKRFCLPLPELKRQLADAGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYWGGKALAAGAAR
                     VAD"
     gene            3501..5477
                     /locus_tag="AABD07_001760"
     CDS             3501..5477
                     /locus_tag="AABD07_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFB2356240.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQVGLAIMRLNSSILD
                     LPPTKQYFQSGSLWDELRQGFRMGEVNPELVRRHESKFIASRSYFDRVVNRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAVNRARDQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPGRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKNKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLHTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVSIARIQPAAAQTADITVAPLPQETVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQVVPPNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAETSPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            5545..6237
                     /locus_tag="AABD07_001761"
     CDS             5545..6237
                     /locus_tag="AABD07_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFB2356241.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIRGGYVSINGTCMDDTDADIDSS
                     YVETLDIDGEAVTVVPEPYFYILLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVPLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIECPKF"
BASE COUNT         1688 a         2009 c         1407 g         1363 t
ORIGIN      
        1 ctttaccgat aaaaaacggg taaatttttt gccttttgac cggctccggc tacaaggcga
       61 tgaaataagg attttccgac gaaaaaggaa aacttccggt tttccgcccc tgcgaattgt
      121 taaattttgc aaagtatgat ttttgccacg ccgccgccga caaattccat tttcttaccg
      181 attggaattt attattgaga ttaatatgtt atttgaattt gcatatcaaa cggcaagttt
      241 tgtcggctga atgagtctga aactgccgac agtttgcccg ttccatcctt ccatcctata
      301 ctggaaggaa ttacaaactg aaaggatcgt catgtccgtc aataaagatg cttgccatac
      361 tgttgtctgc aatactggga ctggtatcaa caactgccgc tgccggtacg tcagaacccg
      421 cccaccgaca taccaaacat atcagcaagg caaacaagca gatgctgcac cccgaatgca
      481 ggaaatattt ggaacgccgt gccgcgtggt accgatcgca aggcaacgtg caggaattgc
      541 gcgaaaacaa aaaggcgcgc aaagcattcc gcaccctgcc ttatgcggaa cagaaaatcc
      601 aatgccgggc ggcttatgag gctttcgatg atttcgacgg cggcaggttc cgccgttaat
      661 cccatataaa atatgctgtc tgaacacaag ttaagatggc attttccata gatatagtgg
      721 attaaattta gaccggtacg gcgttgcctc gccttgccgt gctatttgta ctgtctgcgg
      781 cttcgccgcc ttgtcctgat ttaaatttaa tccactatac aacaaactat ccttacggca
      841 tttcttttga ggtactcccg ttaccgcagc cttaaggcat ccgcaaaagc gaatcatacc
      901 gccacattcc gacaaccgct ttcagacggc aacatccgca tcgcctgcga caacggcacg
      961 gatgctttct tcgattttat cttttaaagc ataacggtct tcgctttccg ccgcgtccgc
     1021 cacgcaaacg aaatcgactt tgatagtcag ttttttcata gacacgattc gccacaggca
     1081 agtcggcaaa ccgacatcgg catacgacgg acgggccgtc ctttttcccg tttcgtcata
     1141 ataacgcagt gcgaccgcca aaacctttgc ccccgcatcg atggcggatt ggaacagcgc
     1201 agccttgaac ggcaggagcc ccagtccgga ggaagttcgc gcctcaggga aaaaactgac
     1261 gttttgaccg cgttgcaagg tttcgcagac ggcgcggtta atcggttcga tgtcgcgccg
     1321 cgaattgcgg ttgatgaaca ccgttcccgc gttctgcccc atcttgccca ataccggcca
     1381 gcttttgatt tcctgcttgg cgataaagct actcggataa accgcgctca tcgcgaaaat
     1441 atccagccag gacacgtggt tggcggcaac caagacaccg ttcggatgtt cgggtgcggg
     1501 tctgcccacc tccaatccga tatccaaagc cgccaaagcg cccttgccca acgctataac
     1561 tgcccgattg cgcgacttgg ggcagccgcc gtcaataccg cgcaggtttt tgccggtttt
     1621 gaacagccag accgtcaagc ggcacaagcg gcgcagacgt gtaaaaaatg aagctttatt
     1681 tgaagacatg ggcaattctt tcccgataat cggtgtttgt tgttgaaacg ttcggacggc
     1741 ataccgataa aatgccgtca gaaaccgttt tccgccctat ttctgacagt tcgtgcaata
     1801 aaacgtgccg cgctgcccca aagtttcttt cacaaccaaa ccgccgcacc ggaggcacgg
     1861 ctgattgtgc cgcccgtaca ccgtatattc ctgttgaaag tagccgcttt tgccgtcgct
     1921 gtccacaaaa tccctcagcg tactgccgcc cgtttcaatg gcgcgctgca acaccgcttt
     1981 gacggtttca accaaaaccg cgcactcttt cttttttagg cggttggcag gacggtgggg
     2041 cgaaatgccc gccctgaaca gactctcgtt ggcataaata ttgcccacgc cgaccacgac
     2101 ggtattgtcc atcagagcga gtttgaccgc gcgtttctgc gccttcagcc ccgcatacag
     2161 ataatccgtg caaaatgcct ccgacaaagg ctccggcccc agtttttcca acagcggatg
     2221 acgttcttcg attccctcat accaaagtat cgcgccgaac tttctcggat cgcggtaacg
     2281 catgaccgtg ccgtctgaaa acacaatatc gacgtgatcg tgtctgtccg gcctgccgat
     2341 acgtccgtcc gacggcgtaa agatccgcaa gctgcccgac atccccaagt gaatcagcaa
     2401 aatccccgtt tggaaacgga caatcagata tttggcacgc ctgccgcagg acaaaacctg
     2461 ccggccggac aaaatctccc ccaaatcggg attgatctgc cagcgcagct tcagttggcg
     2521 caatatcacg gcttccaccg tttttccttc aatatgcggc gcgatgccgc gcaacgtcgt
     2581 ttccacttcc ggcaattccg gcataacccc tcccgacatt tcttctgaca gatgccgtct
     2641 gaaagacggc cgtcccttaa tccgcaaccc ttgccgcacc cgccgcaagg gctttgccgc
     2701 cccaataccc gtcccacgcg ggcaggggcg ttacgcccgc cgcccttttg accaaaacca
     2761 aaccgtacac tgcggcacat tgcggccacc aacggtcgcc cgccttttcc ataaaccgcc
     2821 aaaagcgtat ttgcccgagc gacgaaacgg gaggcagata caccatgaat ttcccaaatt
     2881 caatatcgaa accggcatcg gcaagctgcc ttttcaactc gggcagcggc agacaaaacc
     2941 gtttttccgg cagacggaca ccgtcaaacc aacggcagaa tccccaaagc gaatacggat
     3001 tgaaacccgt cagcatcaaa cgtccggacg gtttcaatat ccggtgcgct tccgacagga
     3061 tttgcgaagg tacgccgcat tccagcgtat gcggcaaaag cagcatatcc gcaaaaacat
     3121 ccgccaaagc catattctcc gccgacatcg acatatctcg cggcacacag acaatgtctt
     3181 cagacaggct cagccactga ccgcccacct gaaccgcaca cattcccgaa aaacggtatg
     3241 acgccacata ccgattaaag aagtcctgtt ccaattttgc aacataccgc cccatcgccg
     3301 tatcttcaaa ccatgcatcc atattgcgtc cgtttcaaac agattgcctg ccgatatttt
     3361 attccaaaca ggatttctgt caaaaaacac atcggccgcc catttccgaa tccgcataaa
     3421 gttcctgtaa aacttgacgc tttttcagtc aaacagtacc atcggacgat aaaatatgtt
     3481 tattccgccg agtataaatc atgtccaaac tcaaaaccat cgccctgacc gcatcaggtc
     3541 tgtccgtttg tccgggtttc ctatatgccc aaaacacctc atcacaccaa gtcggtttag
     3601 cgattatgcg gttaaactct tcaatactcg acctgccacc gacaaaacaa tatttccaat
     3661 ccggcagcct gtgggacgag ctgcgccaag gcttccggat gggcgaagtc aatcccgaac
     3721 tggtacgccg ccacgaaagc aaattcatcg caagccgcag ctatttcgac agggtcgtca
     3781 accggagccg accctatatg taccatatcg ccaacgaagt caaaaaacgc aatatgcccg
     3841 ccgaagccgc cctgcttccc ttcatcgaaa gcgcgttcgt caccaaagcc aaatcacacg
     3901 tcggcgcatc gggcctgtgg cagttcatgc ccgctaccgg caggcattac ggcttggaaa
     3961 aaacaccggt ttacgacggc aggcacgacg tttacgcagc caccgatgcc gcactcaact
     4021 atctgcaata tctctatgga ctgttcggcg actggccgct cgcctttgcc gcctacaact
     4081 ggggtgaagg caacgtcgga cgcgccgtca accgcgcccg cgaccaaggg ctcgaaccga
     4141 cctacgaaaa cctgcgtatg cccaacgaaa cgcgcaacta tgtccccaag ctgctcgccg
     4201 tgcgcaacat tattgccacc ccccaatctt tcggcatgaa tatcagcgac atagacaaca
     4261 aaccctattt tcaggcagtc gaaccgggcc gtccgctcga caacgaagcc atcgcccggc
     4321 ttgccggcat cacgcaaagc gagctgctcg ccctgaatcc tgcattcaac gtccccgcgt
     4381 tcatccccaa aaacaaacgc aaactgctgc ttcctgtcgc gtccgtccaa accttccaaa
     4441 gcaactacct caacgccgca cccgacagcc tgttttcatg ggaagtctat acgcctgccg
     4501 ccaaaaccag cctgtccgac atctcgacgg caaccggcat gagcattgcc gacatcaaac
     4561 gcctcaacaa cctgaacggc aaccttgtca acgcaggacg cagcatcctt gtcgccaaga
     4621 acggcaagac ccttcatacg gcatcggaat ccgtcgtttc catcgacatc gacaatacgc
     4681 ccgacaccta ccgttccaat atgccggcag gcacggtgaa cgtcagcatt gcccgaatcc
     4741 aacccgccgc cgcacagaca gcggacatta ccgtcgcacc tttgccgcaa gaaaccgtcc
     4801 gtacggaacc cgatcccctt gtccgcattg ccgaacccgc ccttgcgaca gccgcagcgc
     4861 aacctcaaac cgaaaaacag actgccatgc cgtctgaaac ccaaaccgca acactcgcgc
     4921 aggtcgtccc cccaaacgac atgcaggcgg cagacgaact catgcagctt gttgcccgaa
     4981 acaacctgcg ccggcaggct gaagaaacca tctccgccgt catcggcacg cctgacacag
     5041 ttgccgaaca caacatttcc tcatctccgc aacataccgt tgccgccgac ggcaaacgcc
     5101 gggcacgttt ggaaacgcgc gtagccaaag ctgccgacgg cgaagccgaa acctccccgc
     5161 tccatgccag catccaccgc gttgtagaag gcgacaccct gttcaacatt gccaaacgct
     5221 acaacgtcag cgtagccgac ctgattgtcg ccaacaacat caaaggcaac accatccaaa
     5281 aaggacaggt actccgcctg gcgcaggcag cccctgccca aacccgtatt gaaaaagtat
     5341 cctacaccgc gcgcaaaggc gacaccttca aaagtatcgc cgcgcgcttc aatatccata
     5401 tcgacgacat ccgccggctc aatcccaacc tgaacaccat caatccggga cagagggtca
     5461 aactgattgg aagctgattc ggatacggca catgacagga ctttctcagt cctgtctttt
     5521 tcatcccaca tttcccatac catcatgaaa ctcatcaaat acctgcaata tcaaggcata
     5581 ggaagccgca agcagtgcca atggctgatt aggggcggct acgtctccat caacggaacc
     5641 tgcatggacg acaccgatgc agacatcgat tcctcatacg tcgaaacgtt ggatattgac
     5701 ggggaagcag taaccgtcgt tcccgaaccc tatttctaca tcctgctcaa caagcctgaa
     5761 gattacgaaa cttcgcacaa accgaaacac taccgcagcg tattcagtct gttccccgac
     5821 aatatgcgga acatcgatat gcaggcggtc ggcaggctgg atgcggatac gaccggcgta
     5881 ttgctaatta ccaacgacgg caaactgaac cacaacctga cttcgccgag cagaaaaatt
     5941 cccaagctat acgaagtaac gctcaaacac cctacaggag aaacgctctg cgaaactttg
     6001 aaaaacggcg tgccgctcca cgacgaaaac gaaaccgttt gtgccgccga tgccgttttg
     6061 gaaaatccga ccaccctgct gctgaccatt accgaaggaa aataccacca agtcaaacgc
     6121 atggttgccg ccgccggcaa ccgcgtgcaa caccttcacc gccggcgatt cgcacatttg
     6181 gaaacagaaa acctcaaacc cggggaatgg aaatttatcg aatgtccgaa attctgaaac
     6241 aaaattccat aatttcccta tattcaacca tatgcttatt aaataagcag ttttacaaaa
     6301 attaactcaa aaaacagtta gtttacaata taatccgctt gtctaagtaa cgcctgttca
     6361 agcaggatta tgagcaagac gttttccccg taatgtgttt tgccatctat acttcccccc
     6421 ttgtatagat ggttttctat ttcaaattcc ctctctttca tcatcat
//
LOCUS       DAWXHA010000107         6380 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.107, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000107 DAWXHA010000000
VERSION     DAWXHA010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6380
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.107"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..524
                     /locus_tag="AABD07_001762"
     CDS             <1..524
                     /locus_tag="AABD07_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HFB2356242.1"
                     /translation="IAADYARYRKWNDNKYSVNIENVRIRKENGIRIDRKTENQENGS
                     FHAVSSLGLSAVYDFKLNDKFKPYIGARVAYGHVRHSIDSTKKTIEFLTAPSNAPNGA
                     STNYDISPKTQNAHQESNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLENTRF
                     KTHEASLGMRYRF"
     gene            complement(944..3733)
                     /gene="ileS"
                     /locus_tag="AABD07_001763"
     CDS             complement(944..3733)
                     /gene="ileS"
                     /locus_tag="AABD07_001763"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003747300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HFB2356243.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTVA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     GALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMSVWEANPVILQWPEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGSDGKTLRDKAIKAVDDTEFFPPWG
                     RARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVAQRIEEKGIE
                     AWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYALVLARRLQERLAGGYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PAINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGDELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
     gene            complement(3875..4795)
                     /gene="ribF"
                     /locus_tag="AABD07_001764"
     CDS             complement(3875..4795)
                     /gene="ribF"
                     /locus_tag="AABD07_001764"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HFB2356244.1"
                     /translation="MKIRPGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADA
                     RGLPVVAVIFEPQPKEFFAARTGKTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNF
                     SEISAQAFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRRIEADMEAAKCW"
     gene            5293..5967
                     /locus_tag="AABD07_001765"
     CDS             5293..5967
                     /locus_tag="AABD07_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HFB2356245.1"
                     /translation="MQADLAYAAERITHDYPEPTGTKKDKISTVSDYFRNIRTHSIHP
                     RVSVGYDFGGWRIAADYARYRKWNDNKYSVDIKELENKNQNKRDLKTENQENGSFHAV
                     SSLGLSAVYDFKLNDKFKPYIGARVAYGHVRHSIDSTKKTTRFLTSSYGGAKPTVYPE
                     ENTQDAHHQSNSIRRVGLGVIAGVGFGITPKLTLDAGYRYHNWGRLENTRFKTHEASL
                     GMRYRF"
BASE COUNT         1458 a         1780 c         1690 g         1452 t
ORIGIN      
        1 gcatcgccgc ggattatgcc cgttacagaa aatggaacga caataaatat tccgtcaaca
       61 tagaaaatgt gcggatacgt aaagagaatg gcatcaggat agaccggaag acggaaaatc
      121 aggaaaacgg cagcttccac gccgtctcct cgctcggttt gtccgccgtt tacgacttca
      181 aactcaacga taaattcaaa ccctatatcg gtgcgcgcgt cgcctacgga cacgtcagac
      241 acagcatcga ttcgaccaaa aaaacaatag agtttcttac cgccccctcc aatgctccta
      301 acggagcatc tacaaattat gatattagtc caaagacgca aaacgcccat caagaaagca
      361 acagcatccg ccgcgtgggt ctcggtgtca tcgccggcgt cggtttcgac atcacgccca
      421 agctgaccct ggacgccggg tatcgctacc acaactgggg acgcttggaa aacacccgct
      481 tcaaaaccca cgaagcctca ttgggcatgc gctaccgctt ctgattcccc gataccgatg
      541 ccgtctgaac cttcagacgg catttttaat cgcccgccgt ttacaggcgc ggggcgggcg
      601 cagtaaaata cccgaaccgt cattcccgac aacaccgcaa tctcgaaacc cgtcattccc
      661 gcgcaggcgg aaatctagat ctgtcagtgc aggaacttat cgggcaaaac ggtttcttga
      721 gattttgagt cctggattcc cactttcgcg ggaatgacaa ttcataagtt tcccgaaatt
      781 ccaacataac cgaaacctga cagtaaccgt agcaactgaa ccgtcattcc cgacaacacc
      841 gcaatctcga aacccctccg ccattatgaa gacaaatcgc ggcacaaaaa atgccgtctg
      901 aaatactgtt tggcggtttc agacggcatt tgctcaaact ttatcaggcg taatggcgcg
      961 tttcgccttc tccgccgaca ttctccgcac agcgtttgca gacggtttca taacctgcaa
     1021 ccgcgcccac atcgcgggtg taatgccagc agcgttcgca tttttcgccg tcgctggctt
     1081 tggcggcaac ggcaagttca tcaccgactt tcacttctgc tttagacacc agcagggcaa
     1141 agcgcaattc ttcgcccaaa gcattcagat agccggccat ttcttccggc gcggtgattt
     1201 cggcttccgc ctgcaaggac gaaccgacgg ttttgtcggc gcgcaaaggc tcgatggcgg
     1261 cggttactgc ttcgcgcgct tcgcggattg ccgtccattt tttcaccagt tcggcttcgg
     1321 ctttttcgtt gatggccggg aactcgtgcc aagtatggaa gaggacgctg tcttcttcgc
     1381 cgccgccgat gatgtcccac gcttcttcgc cggtgaagca caaaatcggt gcaatcaaga
     1441 gaaccaggct gcgcgtgatg tggtacaggg cggtttgcgc gctgcggcgg gcgcggctgt
     1501 cggctttggt ggtgtagagg cggtctttca ggatgtcgag gtagaacgcg cccaagtctt
     1561 ccgagcagaa agaaacaatg tctttcacgg cgaagtggaa ggcatagcgc ggatagtaac
     1621 cgcctgccaa acgctcttgc agccgccgcg ccaataccaa ggcgtagcgg tcgatttcca
     1681 ccatatccgc ctgttgcacg gcatcttcaa tcgggttgaa gtcgctgagg ttggcaaaca
     1741 ggaagctcaa ggtattgcgg atgcggcggt agctttcggt tacgcgtttg aggatttctt
     1801 tggaaatcgc caattcgccg ctgtaatcgg tggatgccgc ccacaggcgc aggatgtccg
     1861 cgccgaactc gttatacact tcctgcggcg cgacgacgtt gccgatggat ttcgacattt
     1921 tgcggccgtt ttggtcaacc acgaaaccgt gggtcagcag ctgtttatac ggtgcgcgtc
     1981 ccatggatga ggcgcaaccg gtcagcatag aggattggaa ccagccgcgg tgttggtcgc
     2041 tgccttcgag gtacaagtca gccggccatt ccaattcttc gcgttgtttt acaacggaat
     2101 aatgcgtcga gcctgagtcg aaccatacgt ccatggtatc ggggagtttg tcgtaatgtt
     2161 cgcaatcttc ggcgcttaat aattcgcttt tatcgaggga gaaccaagcc tcgatgcctt
     2221 tttcttcgat gcgttgcgcg actttttcca aaagttcggc agagttcgga tgcagctcgc
     2281 ccgtttcttt gtgaacaaag aaagtcatcg gcgtgcccca atagcgttgg cgtgaaacca
     2341 cccagtcagg acggccttca atcatggatt ccaaacgcgc acgaccccat ggcgggaaga
     2401 attcggtgtc gtccacggct ttgatggctt tgtcgcgcag ggttttaccg tcgctgccgg
     2461 ctttgtccat gccgacaaac cactgacctg tcgctcggta aatcagcggg gttttgtggc
     2521 gccagcagtg ggcgtagctg tgttcgattt tgctgcttgc caagaggttg ccggtttctt
     2581 ccggccattg caggatgacg ggattcgcct cccaaacgct catgcctgcg acacgaggcg
     2641 tttcgcttat gtatttgcct tcggcgttga cagggttgta aagctcgatg ccgtatttat
     2701 tgcagacggc gtagtcttcc aaaccgtgcg caggcgcagt atgcaccaag ccggtaccgg
     2761 catcggtggt aacgtgttcg ccgttgagca tgggaatatc gcgttcgagg aacggatgat
     2821 tcatgtgcag gttttccagc ttgtcgccgg tggtttcggc aaggatggcg atgccgtctg
     2881 aaaagccgta gcgtttcaaa gcgccttccg ccaaatcttt cgccagcacc aatttgcctt
     2941 tgggcgtatc gattaattga tacaccacgt ccgcgccggc agacacggcc tggctcgcag
     3001 gcagagtcca aggcgtggtc gtccaaatga cggcaaacgc tttgccttcg atacctgcca
     3061 agccgaatgc ggcggcaagc gcgacggtgt ctttaaacgg ataggcaaca tcaatcgcag
     3121 gcgatacttt gtctttgtat tccacttccg cttccgccag cgaagatccg caatccaagc
     3181 aaaactgaac cggtttcgca ccacggtaga gatagccgga tttgtagatt tcgccgagca
     3241 tacgcacggt atcggcttcg gttttgaaat ccatagtcag gtaaggatga tcccaatcgc
     3301 ccaacacgcc caagcggata aagtcttttt tctgacgggc aatctgttcg gcggcatatt
     3361 cgcggcacaa ttcgcggaaa cgggctttag gcatatcttt gccgtgcagt ttttccacca
     3421 tcacttcgat gggcaggccg tggcagtccc aacccggtac ataaggcgcg tcaaaaccgg
     3481 cttgggtttt gctgcggata ataatgtctt taaggatttt attgacggca tgaccgatat
     3541 ggatgtcgcc gttggcatac ggcgggccgt cgtgcaggat gaatttcgga cggcctttgg
     3601 cgatttcgcg cagtttttgg taacgttttt gctcgtacca gcttttcagc cacgcaggct
     3661 cgcgcttggc aagattgccg cgcatcggaa acgggctttc gagcaggttg acggttttac
     3721 tgtaatcggt cattttttaa tctctattgt tacaatattt cggtttcaga cggcattgcg
     3781 cctcaaacag tatttcacaa cgggaaaccc ctgtgccgtc tgaacagtta aaaggctgat
     3841 tgtagcccaa tcggatggtt tgtataaggt ttttctacca acactttgcg gcttccatat
     3901 cggcttcaat ccgccttttc agttcttcca taccgtcaaa cttttcctcg tcgcgcagtt
     3961 tgtgcaggaa gcggacgttc aaccgttgtc cgtacaaatc gccttgaaag tcgaacaggt
     4021 ggacttcaag cttttgagaa cagccgccat caacggtggg attgaagccg aagctcgcca
     4081 cgccgcgccg cgtgccgaat gcgccgtccg cctcgacgac gaacacgccg ccgagtgcat
     4141 aacggtggcc gggcaggcgg atattggcgg tcggggcgtt taaggtgcgt ccgagttttc
     4201 tgccgtgcac caccctgccc cccaaaacgt agtcgtgccc caaaagtttc ttcgcatagg
     4261 caaggttgcc gtctgaaagg gcttggcgga cggcggtact gctggtgcgg atgtcttcga
     4321 cgatgacgga aggcgtgcgc tcggtttgca tatcgggctg ttgtgccaaa agttcaaaac
     4381 agccttcccg ccccgcaccg aaacggaaat catcgccgac gagcaaatag cgcgtattca
     4441 aggtttgacg cagcaggcgg tcgataaatg cttgcgcgga tatttcggaa aaattccgat
     4501 cgaaacgcaa aacccaggcg gcatcgacgc aaccggtttt ttcgagcagc ccgagtttgg
     4561 tacgcagggg gctgatacgg cacggcgggg ttttgcctgt gcgggcggca aaaaattctt
     4621 tgggttgcgg ctcgaaaatg acggcaacga cgggcaatcc gcgtgcgtcg gcttcgaggc
     4681 ggagtttttg gaggatgtgt ttgtgtccga ggtgcacgcc gtcgaaattg cctatggtta
     4741 cggcggcccc gtgcggaaag tcgggcgcgt tgtgccgccc cggcctgatt ttcattgtat
     4801 ttccttttcg gttgaaaccc cgccactcgg acatccgtcc ttcggggcgg caggatcaga
     4861 ctttattcgg gaggggtgca accccttcca aatcaggacg acacataggg cggtgcttga
     4921 tgtgccgtcc cgtgtgttga aacattgttg cgttcgggta tgtggtgaaa caggcggtca
     4981 ttgtaaacgg tattgcggtt tatagacagt gtgccgcccg ttccgcccgc ccgacgcggg
     5041 aaaagcaggc aaatttcccg ccgccgaacg cgccaaacgc ataaaacgcg cagcaggcgc
     5101 ggtgctatgt attgaaacac cgcccggaac ccgatataat ccgcctttga agcatcagtg
     5161 aaaatctttt tttaaccggt caaaccgata taaggagccg aaaatgaatc cagcccgcaa
     5221 aaaaccttct cttctcttct cttctcttcc gcagcgcagg cggcaagtga aggcaatggc
     5281 cgcggcccgt atgtgcaggc ggatttagcc tacgccgccg aacgcattac ccacgattat
     5341 ccggaaccaa ccggtacaaa aaaagacaaa ataagcacgg taagcgatta tttcagaaac
     5401 atccgtacgc attccatcca ccccagggtg tcggtcggct acgacttcgg cggctggagg
     5461 atagcggcag attatgcccg ttacagaaag tggaacgaca ataaatattc cgtcgacata
     5521 aaagagttgg aaaacaagaa tcagaataag agagacctga agacggaaaa tcaggaaaac
     5581 ggcagcttcc acgccgtttc ttctctcggc ttatcagccg tttacgattt caaactcaac
     5641 gacaaattca aaccctatat cggtgcgcgc gtcgcctacg gacacgtcag acacagcatc
     5701 gattcgacca aaaaaacaac acggtttctt acctcctcct atggtggcgc aaaacctacg
     5761 gtttatcctg aggaaaatac gcaagacgcc catcaccaaa gcaacagcat ccgccgcgta
     5821 ggtctcggtg tcatcgccgg cgtcggtttc ggcatcacgc ccaagctgac cttggacgcc
     5881 ggctaccgct accacaactg gggacgcctg gaaaacaccc gcttcaaaac ccacgaagcc
     5941 tcattgggca tgcgctaccg cttctgattc cccgataccg atgccgtctg aaccttcaga
     6001 cggcattttt aatcgcccgc cgtttacagg cgcggggcgg gcgcagtaaa atacccgaac
     6061 cgtcattccc gacaacaccg caatctcgaa attcgtcatt cccgcgcagg cgggaatcta
     6121 gatctgtcag tgcaggaact tatcggataa aacggttgcc caaaccccgc gtcctagatt
     6181 cccacttccg tgggaatgac ggttcggttg cgttccgaca acaccgtagt cttaaaaccc
     6241 gtcattcccg acaacaccgt aatcttgaaa cccgtcattc ccgacaatac cgcaatctcg
     6301 aaacccgtca ttcccgcgca ggcggaaatc cggacccctg acgcggcggg aatctatcgg
     6361 aaataactga aaccccgcgt
//
LOCUS       DAWXHA010000108         6375 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.108, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000108 DAWXHA010000000
VERSION     DAWXHA010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6375
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.108"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..288
                     /locus_tag="AABD07_001766"
     CDS             <1..288
                     /locus_tag="AABD07_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356246.1"
                     /translation="VWDDEEYWKLENALIEVRRKYPYPMDIPRDIVIGIGIIIDFLMV
                     PNWELFEIKASPWLPDSVGIHERYERFRVMLRYIFTEIDIVNVRFDYYNKK"
     gene            complement(352..2565)
                     /locus_tag="AABD07_001767"
     CDS             complement(352..2565)
                     /locus_tag="AABD07_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFB2356247.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWSLA
                     QEHYPADAATPYGEPLPDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLDILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSGKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSATTIVKQSKIKKGGKTGVLIDGEDGLMTTLAKCCKPAPPDDIAGFVTR
                     ERGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLAGLGDVKGVLSVTRL"
     gene            2690..3349
                     /gene="grxB"
                     /locus_tag="AABD07_001768"
     CDS             2690..3349
                     /gene="grxB"
                     /locus_tag="AABD07_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin, GrxB family"
                     /protein_id="HFB2356248.1"
                     /translation="MTRNILMKLYIYDHCPFCVRARMAAGLFGADVEEVVLANDDEAT
                     PIGMIGAKQVPVLQKEDGSFMGESLDIVCHFDREGRLKDEVRPEIQAWLDKVGGYNNK
                     LVQPRLIKIGLPEFVTPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENL
                     MDGTSDGINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRA
                     L"
     gene            complement(3421..4059)
                     /locus_tag="AABD07_001769"
     CDS             complement(3421..4059)
                     /locus_tag="AABD07_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HFB2356249.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCIAASGP
                     LSNLAMAVLWGVVLVLTPYAGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLPAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            4315..5166
                     /locus_tag="AABD07_001770"
     CDS             4315..5166
                     /locus_tag="AABD07_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HFB2356250.1"
                     /translation="MDKERILTPAVVFSVALLHLAIVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGGGAPEGAGAPAAPEPQPAPDPPKPVEPPKPVLKPAVTKKADADIQQPKEK
                     PKPEEKPKPEPEPEAKPAPKPAEKPAEKPSEKPAEHSGNASAKAGSEQGNGEGKGTGT
                     KGDGTGRGEGSGKGSGGAKGEHGEGAGGSGGGTGVGSSKGNPLRANGSIPRPAYPALS
                     MENDEQGMVVLSVLVSPGGHVESVKVVKSSGFSRLDNAARKAAQNGHFQANAWTEFKV
                     PVKFELN"
     gene            5232..5894
                     /locus_tag="AABD07_001771"
     CDS             5232..5894
                     /locus_tag="AABD07_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbB"
                     /protein_id="HFB2356251.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSTVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            5897..6331
                     /locus_tag="AABD07_001772"
     CDS             5897..6331
                     /locus_tag="AABD07_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HFB2356252.1"
                     /translation="MAFGSMNSSDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
BASE COUNT         1442 a         1507 c         1937 g         1489 t
ORIGIN      
        1 gtgtgggatg atgaagaata ttggaaattg gagaatgctt taatcgaggt taggagaaaa
       61 tatccttatc cgatggatat accaagggat attgtgattg gaatcggtat cattattgat
      121 tttttaatgg ttccaaattg ggagcttttt gaaattaaag cttccccttg gttgcctgat
      181 agtgtgggaa ttcatgaacg ttatgaaagg ttcagagtaa tgctccgtta tatttttacc
      241 gagatagaca tagtcaacgt gcgatttgat tattacaaca aaaaatagca aaccccggca
      301 atcaaaatgc cgtctgaagc gttatccggc tttcagacgg catttttgta tttaaagccg
      361 ggtaacgctc aatacgcctt tgacatcgcc gaggccggcg aggacgcgcg ggaggtcgtt
      421 gacttgtttg acttcgagcg tgaacctcat gctggcttcc aagtcgcggg actgggtttg
      481 cacggcggta acgttgagtt tgtggcgggc gagcgcgtcg gatacgtcgc gcaaaagccc
      541 ggagcggtct tgggcgcgga tttcgatatc gacggcgaac acttgccctt cctgcaacgc
      601 cgcccaactt gcgtccagta ctttttcggg cgcgtgttcg gcaaggtgtc ggaaagaggg
      661 gcaggttttg cggtggacgg aaatgccgcg ctcgcgggta acgaagccgg caatatcgtc
      721 gggcggcgcg ggtttgcagc atttggcaag cgtggtcatc aagccgtctt cgccgtcgat
      781 gagcacgccg gttttgccac cttttttgat tttggactgt ttgacgatgg tggttgcgct
      841 gacgggcacg ggcggcggtt cgttcagcgt gccgcaggct ttttggatgg cgcggttgga
      901 aatttcgcct tgtccgacgg cggtgtagag gtcttctggc tttttgtagc cgagattttc
      961 ggcaagctct tgcaggttgg gtttgggcgt gagtttggca agctgcttgt cgagttggac
     1021 acggccttct tcgcgcacgg tgtcggcgtt ttgctggcgg atgtaggcgc ggattttgcc
     1081 gatggccttg ccggatttga cccagccttc gtaaagccag ttgacggaag gatgcccttc
     1141 tttggcggta atgatttcga cgcgctgtcc gttttcgagc ggggtggaca gcggcacaat
     1201 ctgcccttcg actttcgcgc cccggcagcg gtcgccgatg ctgctgtgca gggcgtaggc
     1261 gaagtcgatg ggggttgcgc ccgttggcag agagaggact ttgccgtgcg gggtcaaaac
     1321 ataaatcgtg tcgttgaaaa gctcggtttt gaaggcggcg gcgaggtctt ccttgccgct
     1381 ttccgccata ttttcgcgcc agtccaagag ttggcgcaac caggcgattt tttgttcgta
     1441 ggcggaatcg cctttgccgc cttctttgta acgccagtgg gcggcgacac cgaattcgtt
     1501 gaattggtgc atatcgaagg tgcggatttg cacttccaca cctttgtctt ccgggccgac
     1561 gatgacggtg tgcaaacttt tataaccgtt gcctttgggg ttggcgatgt agtcgtcgaa
     1621 ctcgccggga atgggctgcc agaggctgtg gacgatgccc agcgtggtgt aacactcggg
     1681 gacggtatcg accagaatcc gcacggcgcg gatgtcgaac aggccgtcga agctgagttt
     1741 tttcttcacc atttttttgt aaatggagta gatgtgtttc ggacggccgg cgacttcaaa
     1801 gtggatattg tattttttga gttccgtacg caggatatcg aggaagtttt cgatgtattc
     1861 gaggcgttcg gtgcgttttt cgtccaaaag cagggcgatt tcgcggtatt tttcgggttc
     1921 ttgatggcgg aagcccaaat cttcgagctg ccatttgagc tgccacacgc ccaagcggtt
     1981 ggcgagcggg gcgaagatgt cgagggtttc tttggcgacg gcgcgttttt cagggctgtc
     2041 gggggcgttg cttaaaaatt gcagggtgcg cgtacgcatc gccagtttga ttaatacgac
     2101 gcggatgtcg gtaaccatcg ccagcagcat tttccgcatg gtttccgctt gctgtgcgcg
     2161 ttcttccggc gtggcgaggc tgtccacccg ggcgaagtgg gtaagtttct gcacttcgtc
     2221 cacacctttg accagctcgg cgacggtgct gttgcagcgc tcggaaacca ataggttcca
     2281 atcggggacg tagcgtccga tgtcggcaag cagggtggcg gcgacggcat cgggcagcag
     2341 gtcgagttcg tcgaccattt gcgccgcgcc gaggaagtgg tcgggcagcg gctcgccata
     2401 cggcgtggcg gcatcggcag gataatgttc ctgcgccagc gaccatgcgg taccgatgag
     2461 gtttttatcg ttgtccggca gagcggcgca gtagctgtcg aaccattcgc gcaattcttg
     2521 cagggtcgcg ctttgcgtgt cttgaatcgg gctgatggcg gtcatgatgg gatcttccgt
     2581 tccgataaaa acgagttcat tgtaacagct tatttattta cggtgcatag gcgggaagat
     2641 aaacttgttt cgggcggcgc cgggtgttaa ggtagccggt accgacaggt tgacgaggaa
     2701 tattttgatg aaactgtata tttacgacca ttgcccgttt tgcgtgcgtg cgcggatggc
     2761 tgccgggctg tttggtgctg acgttgaaga agtcgtgctg gcaaacgacg acgaggcaac
     2821 gccgatcggt atgatcggtg cgaaacaagt gcccgtcctg caaaaagaag acggttcgtt
     2881 tatgggcgag agtttggaca ttgtgtgcca tttcgaccga gaaggccgtc tgaaagacga
     2941 agtccgcccc gagatacagg cgtggctgga caaggtaggc ggatacaaca acaaattggt
     3001 tcagccacgc ttgatcaaaa tcgggctgcc cgaatttgta acgccggaag cggtgaaata
     3061 tttcacagac aaaaaagaga aaagcatcgg cagcttttcc gccaatttga ataaaaccgc
     3121 ccaatacctt gaacggataa acgcagattt gcaagagttg gagaatttga tggacggtac
     3181 ttcagacggc atcaacggtg gaatcggtat ggaggatatt ttggttttcc ccgttttgag
     3241 gaatctgacc gtggtgcgcg gcatcgcgtt ccctcggaag acgatggatt atttaatcgg
     3301 tatgagtgaa aaatcaggcg tgccgcttta tttcgacagg gcattgtaaa accaaaaaaa
     3361 agcggcaggg caatatgtcc ttccgcgttt tttggaacgt ttatgccgtc tgagagccag
     3421 tcagacgaac atctgcacaa acgcaatcac cagccgcaca atcggtgcaa taaacgcacc
     3481 caaaaccccg gtcagcataa gcagcaggat aatccacgtc ccataaggtt cgattttgcg
     3541 gaacgcttgc gaatatttcg ccggcaggaa ggtgtcgatg aaaatgccgc cgtcccaagg
     3601 caggatgggg atgatgttga gcgcgaacaa aatcgcattg atcagaatac cgtagtttgc
     3661 catttgagcc agcggcatct gatacgcccc gccggcatac ggagttagca ccaaaaccac
     3721 gccccacaga acagccatcg ccagattcga cagcgggccg gacgcggcaa tgcaacgcca
     3781 tgcaaggcgc gggttgcgga agttgcgcga atcgatagga atcggacgcg cccagccgaa
     3841 caggaagggc gtgaacatca aagtaagcag cggtacgatg attgtgccga ccaaatcgat
     3901 atggggcagg gggttcagtg tcagcctgcc gtattgttcg gcagtgttgt ctccccagta
     3961 gcgcgccgta tagccgcgcg ccacctccct gacggtaatg gcgagcagca cgggcaggac
     4021 agcaagcaga aacacgccca agtcaaaatt ttgaaacatg gttttccttt gaacagatgt
     4081 ggtgtgcagc ccgaaacggc tgacagacag aagcggcaat atatcatcta acctgatttt
     4141 attggaataa gaaatcagac ggaatcattt tttctgccgg cccgttatct gatgatttgc
     4201 tgtaataccg cgtttaaaca cggtttgcct atgaatggag caggcgttca catgacaaca
     4261 aattataaaa aataggttgc aaataggaat tgttgctatt attatgcccg aattatggat
     4321 aaagaacgaa ttttaacccc cgcagtcgtg ttttccgtcg cactgctgca tttggcaata
     4381 gtggcattgc tctggcaggc gcacaagctg cccgtgatag agtcaggaaa tgttatcgaa
     4441 tttgtcgatt tgggcgattt tggcggaggg ggcggcgcac ccgaaggcgc aggcgcgcct
     4501 gccgcgcccg aaccgcaacc cgcgcccgat ccgcccaaac ctgtcgaacc gcccaagccg
     4561 gttttgaagc cggcggttac aaaaaaggcg gatgcggata ttcagcaacc taaggaaaag
     4621 ccgaaacccg aagaaaaacc taagcccgaa cccgaaccgg aagcgaagcc tgccccgaaa
     4681 ccggcggaaa aaccggcaga gaagccgtct gaaaaacctg ccgaacattc cggtaatgct
     4741 tctgccaaag ccggcagcga gcagggtaat ggggaaggta agggaaccgg taccaaaggc
     4801 gacggaacgg ggcgcggaga aggcagcggt aaaggaagcg gcggtgccaa aggcgaacac
     4861 ggggaaggag ccggcggcag cggcggcgga accggtgtcg gcagcagcaa aggcaatcct
     4921 ttacgcgcca acggcagcat cccgcgcccg gcctatcccg cactttctat ggaaaatgac
     4981 gagcagggta tggttgtttt gagcgttttg gtttctccgg gcggtcatgt cgagtccgtc
     5041 aaagtggtga aaagcagcgg tttttcccgt ttggacaatg cggcacgcaa agcggcgcaa
     5101 aacgggcatt ttcaagccaa tgcctggacg gagtttaaag tccccgtcaa gtttgaattg
     5161 aattaggcgg ttgtcgcggc agtttgcggc agcttggatg tttgattggt tttttcagtg
     5221 ttggaatcat tatgaatttg aaattagtgt ttgaatcggg cgatcccgtc ctgatcggtg
     5281 tgtttgtgtt gatgctgttg atgagtaccg taacgtggtg tctggttgtc ttgcgctgca
     5341 tcaagctgta tcgggcgcgc aaagggaatg ccgccgtcaa acggcatatg cgcgatactt
     5401 tgtcgctgaa cgacgcggtc gaaaaagtgc gcgccgtcga tgcgcctttg tccaaactgg
     5461 cgcaagaggc attgcagtct taccgcaact accgccgaaa cgaagcgtcc gaactggcgc
     5521 aggctttgcc gttgaacgag tatttggtca ttcaaatccg caacagtatg gcgcagatta
     5581 tgcgccggtt tgattacggg atgaccgcgc ttgcctccat cggcgcgacc gcgccgttta
     5641 tcgggttgtt cggcacggtt tgggggattt accacgccct gatcaatatc gggcaaagcg
     5701 ggcagatgag tattgcggcg gttgccggcc cgattggcga ggcactggtg gcgacggcgg
     5761 cgggtttgtt cgtggcgatt ccggcggtgt tggcatacaa cttcctcaat cgcggcacaa
     5821 aaatactgac ccaggatttg gatgcgatgg cgcacgattt gcacgtccgc ctgcttaatc
     5881 aaaaggatag ctgattatgg catttggttc gatgaattcc agcgacgatt ctccgatgtc
     5941 cgacatcaac gttacgccgt tggtggacgt gatgctggtg ttgctgattg tgtttatgat
     6001 tactatgccg gtgctgacgc attccatccc tttggaactg ccgaccgcgt ccgagcagac
     6061 aaacaagcag gacaaacagc ctaaagaccc cctgcgcctg acgattgatg cgaacggcgg
     6121 ctattatgtc ggcggggatt ctgcaagcaa agtggaaatc ggggaagtgg aaagccgtct
     6181 gaaagccgcc aaggagcaga atgaaaacgt gattgtggcg attgcggcag acaaggcggt
     6241 ggaatacgat tatgtaaaca aagctttaga agccgcccgt caggcaggaa ttaccaaaat
     6301 cggttttgta accgaaacca aggcgcaata aagttcgacg cttgaacgaa tgccgcctga
     6361 aagtctttca gacgg
//
LOCUS       DAWXHA010000109         6328 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.109, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000109 DAWXHA010000000
VERSION     DAWXHA010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6328
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.109"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(122..1208)
                     /locus_tag="AABD07_001773"
                     /pseudo
     CDS             complement(122..1208)
                     /locus_tag="AABD07_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951001.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
     gene            complement(1145..1360)
                     /locus_tag="AABD07_001774"
     CDS             complement(1145..1360)
                     /locus_tag="AABD07_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HFB2356253.1"
                     /translation="MSTQFDVAVIGAGPAGSAASALLRKKGYQVCVLENSTFRASSSA
                     KACCRTVWKCWKKPVLPMPFAPGPAFS"
     gene            complement(1540..2913)
                     /locus_tag="AABD07_001775"
     CDS             complement(1540..2913)
                     /locus_tag="AABD07_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFB2356254.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGY
                     IKNLPLRHTVLFGGVNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKAEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTFQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYI
                     HRIGRTGRAGADGVAISLMDESEQKMFEAIKELTGNKLLIERIEGFEPRWWEQEGSKP
                     EKTETSEPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRRGHRTCALL
                     QPRYGVK"
     gene            3127..4131
                     /gene="dusB"
                     /locus_tag="AABD07_001776"
     CDS             3127..4131
                     /gene="dusB"
                     /locus_tag="AABD07_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HFB2356255.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRAFGAGWAVCEMLAS
                     DPTLRNTGKTLHRSDFADEGGIVAVQIAGSDPEQMADAARYNVGLGAQVIDINMGCPA
                     KKVCNVQAGSALMQDEPLVAAILEAVVKAAGVPVTLKTRLGWHDDHQNLPAIAKIAED
                     CGIAALAVHGRARTQMYKGEARYELIAETKSRLNIPVWVNGDITSPQKAAAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECRAAILNHIRAMHAFYGETVGV
                     RIARKHIGWYIGEMPDGEQARREINRLDNAAAQYDTLAGYLERLAGKTDRWACGYREG
                     "
     gene            4320..4559
                     /locus_tag="AABD07_001777"
     CDS             4320..4559
                     /locus_tag="AABD07_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HFB2356256.1"
                     /translation="MNPATADIAQCIEQNLNQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            4562..5098
                     /gene="ruvC"
                     /locus_tag="AABD07_001778"
     CDS             4562..5098
                     /gene="ruvC"
                     /locus_tag="AABD07_001778"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HFB2356257.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPADEP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            5137..6018
                     /locus_tag="AABD07_001779"
     CDS             5137..6018
                     /locus_tag="AABD07_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HFB2356258.1"
                     /translation="MCTEMKFIFFVLYVLQFLPFALLHKIAGLIGSLAYLLVKPRRRI
                     GEINLAKCFPEWDEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAKCLKSLVRYRNKHYL
                     DDALAAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHN
                     VFLIGRTEGLRALVKQFRKSSAPFLYLPDQDFGRNNSVFVDFFGIQTATITGLSRIAA
                     LANAKVIPAIPVREADNTVTLQFYPAWKSFPSEDAQADAQRMNRFIEERVREHPEQYF
                     WLHKRFKTRPEGSPDFY"
BASE COUNT         1381 a         1621 c         1869 g         1457 t
ORIGIN      
        1 cccgatttga cgatgcacta ctgtcctatt ttgattttaa ttgactatat ttgtgtgaat
       61 ggtgaaataa aaatgccgtc tgaacccgat tggattcaga cggcattttg tatggcagga
      121 tttattcgct ttccaactga ccgacccatt ctgacaaggc agtcaggcgt tgttcggatt
      181 tcgccacgaa cgggttttcg gtatcccacg cgtagcctgc caaaatcgaa gaaagcatac
      241 ggctgatttc cgggctgcgg tcgggcgcgt acacgacgtt ttggaagcgg aaatcatacc
      301 agccgtccac ataggtgcgg aacgcgtcta cgccgatcat caggggttcg gcaaattcgg
      361 tttgccaatc ggcggcttcg cctttgagtt gttttgtcag cagatcggca gcaagttcgg
      421 cggagtgcag cgcgatggtt acgcccgacg agaacacggg gtcgaggaac tcggcggcat
      481 tgcccaacag cgcgaaatgc ctgccgtgca gtgatttgac gttggcggaa tagccttgga
      541 tggagcggaa cggaaaatcg ttttcccaaa cggctttgtc caaaatttcg cttaacatcg
      601 ggcattcgta aacaaatttt ttcaacaccg tttccgattc gccggcaagt ttgtcgggtg
      661 tgccgaccac gccgacggaa cagcggttgt cgccgaaggg aatcagccaa atccacacgt
      721 cgcggttgtt gcggatgggt ggtaatcagg attttgttgc ggtcgaattt cgggtgggta
      781 atgttgtcgt cgatgtgcgt gaaatgcgtt tggcgcggcg gcaggtgcga gggcgtttcc
      841 aagtttagca ggcgcggcag cacgcgtccg tagccgcttg cgtccaagac gaatttcgcg
      901 gtcagttcat agctctcgcc ggtgtcggtt tcgatgttca agcgggcaaa atcgccgctg
      961 ttgtcgaacg cggttacgcc gtgcccgaaa cgtacttcaa cgccttgttt ggcggcttct
     1021 tcaatcagga ttttgtcgaa cacggcgcgg cggacttggt aaaccgtgcc ggggccgtct
     1081 gaaaatttat cggtgaaatc aaactcggta tagcggctgc cccacgaaaa cgccgcaccg
     1141 tttttcaact gaaagccggg cccggtgcga acggcatcgg caaaaccggc ttcttccagc
     1201 atttccatac agtgcggcag caggctttcg ccgatgacga agcgcggaaa gtgctgtttt
     1261 ccaacacgca gacttgataa ccttttttgc ggagcagggc ggatgcggcc gaacctgccg
     1321 gacctgcgcc gattacggcg acatcgaatt gggtggacat tgggaaatcc tgatggtttg
     1381 agtggaaaag gaaatgatat tgtacaggca gcaaatgccg tctgaaactg tttgcggaag
     1441 aaatttatcc ggtgcgggcg gttgctccca atgcgtcagt ccggtttgaa aaatgccgtc
     1501 tgaaacggga aatgttcaga cggcatttga ttttcagggt tattttacgc cgtaacgcgg
     1561 ttggagcagg gcgcacgtcc ggtgtccccg gcggcttcgg cggctgcgcc cggcaatttt
     1621 tccgcaggcc gcgcccgcat cgtttgccgt ggtttccggc cgggtatttt tttcgcgctg
     1681 agccctggcg gattcgtagc ggttgcgttg tctcggttcg cttgtttcgg ttttttccgg
     1741 ttttgagcct tcctgttccc accatcgggg ctcgaagcct tcgatgcgtt cgatgagcag
     1801 cttgttgccg gtcagttctt tgatggcctc aaacattttc tgttcggatt cgtccatcag
     1861 ggaaatcgcc acgccgtccg caccggcgcg ccccgtgcgt ccgatgcggt ggatgtagtc
     1921 ttcgggctgg gcgggcattt cgtaattgat gacgaagggc agttcggcga tgtccagccc
     1981 acgcgcggcg atatcggtgg cgacgaggac gcgcaggctg ccgtctttga aggcgttgag
     2041 tgtttcgagc ctgctttgtt gggaacggtc gccgtgtatc gcctgtgcgg acaggttgcg
     2101 gcgcaccagt tcgcgcgtta cgcggtcgac gctttgtttg gttttgcaaa agacgataac
     2161 ttggttcata tgcagatcga caatcagccg ttcgagcagg ttgcgctttt ggaaggtatc
     2221 gacggcgatg atgtgttgtt cgacgttggc gttggtggtg ttttgggcgg caacctcgac
     2281 ggtttcgggc gcgttcatga agtcttgcgc cagtttgcgt atcggggcgg agaaggtggc
     2341 ggaaaagagc agggtttggc gttggcgggg cagcatctgc atgattttgc ggatgtcgtc
     2401 gataaacccc atatccaaca tgcggtctgc ttcgtccaga acgacgattt cggctttgtt
     2461 taaactgatg tttttctgtt tcacatggtc gagcagccgt ccgacggtgg cgacgactat
     2521 ttcgcagccg gcacgcaggt cggcggtttg tttgtccatg ttgacaccgc cgaagaggac
     2581 ggtatgccgc agcggcaggt ttttaatgta gccctgcacg ttttggtcga tttggtcggc
     2641 aagttcgcgc gtcggggtca acacgagcat acgcacgggg tgcattgcag gcgaggtgct
     2701 ggcggtggcg taacgtttga ggcgttccag actgggcagc ataaaggcag cggttttgcc
     2761 tgtgccggtt tgcgcggcgg caagcaggtc gtgtccggcc agtgctttgg gaatggccgc
     2821 ggcttggatg ggcgtcgggt tttcgtaacc ttgcgcggtc agtgcggaaa ccagttccgt
     2881 acccaaacct aaagaggaaa atggattact catgattgta gtctttcttt cagaccttat
     2941 gccgtctgaa gcgggaaacc gataggacgg ggaaataaac tgcccgcctg tgaacggcgg
     3001 ggacgggaat ttgtgtgcgg attatgccat aaaacggtgc ccgccccaat cgcgggcgcg
     3061 tccgcagatt ggaaatcctg cttaaaaaat gtacaatggc gcactttttt gaaacgcggg
     3121 cccattatgc acatcggcgg ttattttatc gacaacccca tcgcacttgc gccgatggcg
     3181 ggcattaccg acaaaccctt ccgccgcctc tgtcgggcgt ttggcgcagg ttgggcggtg
     3241 tgcgaaatgc tggccagcga tccgacgctc aggaataccg gaaaaaccct gcaccgcagt
     3301 gattttgccg atgaaggcgg catcgttgcc gtgcagattg ccggcagcga ccccgaacag
     3361 atggcggatg cggcgcgtta caacgtcgga ctcggggcgc aggtcatcga catcaatatg
     3421 ggctgccccg ccaagaaagt gtgcaacgtc caagccggta gcgcgctgat gcaggacgag
     3481 ccgctggttg ccgccatttt ggaggcggtg gtcaaggcgg cgggcgtacc cgttaccctc
     3541 aaaacccgtt tgggttggca cgacgaccat caaaacctgc ccgccatcgc caaaatcgcc
     3601 gaagattgcg gcattgccgc ccttgccgtc cacgggcgcg cgcgcacgca aatgtacaaa
     3661 ggcgaggcgc gttacgaact catcgccgag accaaaagcc gtctgaacat cccggtctgg
     3721 gtcaacggcg acatcacttc gccgcaaaaa gccgccgccg tcctcaaaca aaccgccgcc
     3781 gacggcatca tgatagggcg cggcgcgcaa ggcaggccgt ggtttttccg cgatttgaag
     3841 cattatgccg aacacggcgt tttaccgcct gccttgagtt tggcagaatg cagagccgcc
     3901 attttgaacc acatccgcgc catgcacgcg ttttatggtg agaccgtcgg tgtgcgcatc
     3961 gcacgcaaac acataggctg gtacatcggc gaaatgcccg acggcgaaca ggcgcggcgt
     4021 gaaatcaacc gcttggacaa tgcggcggcg caatacgaca cacttgccgg ttatcttgaa
     4081 aggcttgccg gaaaaaccga ccgttgggcg tgcggctatc gggaagggta gggcagtatt
     4141 gccatgccgc cgttcgggtt cggacggcat ctgtctgcat ggttcggagg tcgggcggaa
     4201 tcccggccgg cgaatgtcga aaacaataaa tgccgtctga aaacgagtgg aacgggtttc
     4261 gccaaaaggc tttcagacgg cattccgtct taaaaacatt tcaatcaaaa ggatatgcga
     4321 tgaaccctgc gactgcggac attgcgcaat gtatcgagca gaacttgaac caatatttca
     4381 aagacctgaa cggcaccgaa ccttgcggcg tgtacgatat ggtactgcat caggtggaaa
     4441 agccgctgct ggtgtgcgtg atggagcaat gcggcggcaa ccagtccaaa gcctccgtga
     4501 tgctgggact gaaccgcaat accttgcgta agaaactgat tcaacacggt ttgctgtgaa
     4561 tatgtcggca accgtccgta tcttgggcat cgacccgggc agccgcgtaa cgggtttcgg
     4621 catcatcgat gtcagggggc gcgatcattt ttacgtcgcc tccggctgca tcaaaacgcc
     4681 tgccgatgag cctctggcag acaggattgc cgtgattgtg cggcatatcg gcgaagtcgt
     4741 tgccgtttac aagccgcaac aggcggcggt ggaacaggtg ttcgtcaacg tcaatccggc
     4801 atcgacgctg atgctcggtc aggcgcgcgg agcggcattg gcggctttgg tcagccataa
     4861 gctgcccgtt tcggaataca cggccttgca ggtcaaacag gcggtggtcg gcaaaggcaa
     4921 ggcggcgaaa gaacaggtgc agcatatggt ggtgcaaatg ctgggacttt cgggaacgcc
     4981 gcaggcggat gcggcggacg gtcttgccgt cgcgctgacc cacgccttac gcaaccacgg
     5041 gcttgccgcc aaactcaatc cttcggggat gcaggtcaag cgcggaaggt ttcaatagtt
     5101 tcagacggca tttgtatttt gccgcctgaa aagaaaatgt gtaccgagat gaaatttata
     5161 ttttttgtac tgtatgtttt gcagtttctg ccgtttgcgc tgctgcacaa gattgccggc
     5221 ctgatcggtt cgcttgccta ccttctggtc aaaccgcgcc gccgtatcgg cgaaatcaat
     5281 ttggcaaaat gttttcccga atgggacgaa gaaaagcgta aaaccgtgtt gaaacagcat
     5341 ttcaaacaca tggcaaaact gatgctcgaa tacggcttat attggtacgc gcctgccaaa
     5401 tgcctgaaat cgctggtgcg ctaccgcaat aagcattatt tggacgacgc gctggcggcg
     5461 ggggaaaaag tcatcatcct gtacccgcac tttaccgcgt tcgagatggc ggtgtacgcg
     5521 cttaatcagg atgtcccgct gatcagtatg tattcccacc aaaaaaacaa gatattggac
     5581 gaacagattt tgaaaggccg caaccgctat cacaacgtct tccttatcgg gcgcaccgaa
     5641 gggctgcgcg ccctcgtcaa acagttccgc aaaagcagtg cgccgttcct gtatctgccc
     5701 gatcaggatt tcggacgcaa caattcggtt tttgtggatt ttttcggcat tcagacggca
     5761 acgattaccg gcttgagccg cattgccgcg cttgcaaatg caaaagtgat acccgccatt
     5821 cccgtccgcg aggcggacaa tacggttaca ttgcaattct atcccgcttg gaaatccttt
     5881 ccgagtgaag acgcgcaagc cgacgcgcaa cgtatgaacc gctttatcga agaacgcgtg
     5941 cgcgaacatc cggaacaata tttctggctg cacaagcgtt tcaaaacccg tccggaaggc
     6001 agccccgatt tttactgact acataaaatt acaaaacaaa tcaggcgttt cagatcaaaa
     6061 accccgattg tttttgggaa tttgaaaccc gggttgtaca aacaggattt gccggacggt
     6121 tttaacggtt cagttgtttg taaaaacaat gcttttttaa aattgacaaa aaacgaaatc
     6181 ggttttaaag gcttattccg agaacaaagg ggagtggatg ccgaaaaccc ggttaatata
     6241 ttatagtgga ttaacaaaaa ccaatacggc gttgcttcgc cttagctcaa agagaacgat
     6301 tccctaaggt gctgaagcac caggcgaa
//
LOCUS       DAWXHA010000110         6269 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.110, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000110 DAWXHA010000000
VERSION     DAWXHA010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6269
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.110"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            248..1795
                     /locus_tag="AABD07_001780"
     rRNA            248..1795
                     /locus_tag="AABD07_001780"
                     /product="16S ribosomal RNA"
     gene            1892..1968
                     /locus_tag="AABD07_001781"
     tRNA            1892..1968
                     /locus_tag="AABD07_001781"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1926..1928,aa:Ile,seq:gat)
     gene            1974..2049
                     /locus_tag="AABD07_001782"
     tRNA            1974..2049
                     /locus_tag="AABD07_001782"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2007..2009,aa:Ala,seq:tgc)
     gene            2392..5289
                     /locus_tag="AABD07_001783"
     rRNA            2392..5289
                     /locus_tag="AABD07_001783"
                     /product="23S ribosomal RNA"
     gene            5384..5497
                     /gene="rrf"
                     /locus_tag="AABD07_001784"
     rRNA            5384..5497
                     /gene="rrf"
                     /locus_tag="AABD07_001784"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            5787..6149
                     /locus_tag="AABD07_001785"
     CDS             5787..6149
                     /locus_tag="AABD07_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComEA"
                     /protein_id="HFB2356259.1"
                     /translation="MLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNI
                     NAASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASV
                     GAPAPKGPAKPVLPAVKK"
BASE COUNT         1674 a         1364 c         1878 g         1353 t
ORIGIN      
        1 cggttcttcg ccgctgccga agcggcggac gaactgaaaa gtatagcacg gaatgtcgga
       61 aatatcgaga gatatcttag acaggcggaa gggatacttt ataatttcgc aacgctcttt
      121 aacaaaacag attaccgata agtgtgagtg ccttgggcct cgcactgttt gaaagacaga
      181 cgagatgatg ttttgaacat tgtcctgtcg gtttctttga agcagaccag aagttaaaaa
      241 gttagagatt gaacataaga gtttgatcct ggctcagatt gaacgctggc ggcatgcttt
      301 acacatgcaa gtcggacggc agcacaggga agcttgcttc tcgggtggcg agtggcgaac
      361 gggtgagtaa catatcggaa cgtaccgggt agcgggggat aactgatcga aagatcagct
      421 aataccgcat acgtcttgag agggaaagca ggggaccttc gggccttgcg ctatccgagc
      481 ggccgatatc tgattagctg gttggcgggg taaaggccca ccaaggcgac gatcagtagc
      541 gggtctgaga ggatgatccg ccacactggg actgagacac ggcccagact cctacgggag
      601 gcagcagtgg ggaattttgg acaatgggcg caagcctgat ccagccatgc cgcgtgtctg
      661 aagaaggcct tcgggttgta aaggactttt gtcagggaag aaaaggccgt tgccaatatc
      721 ggcggccgat gacggtacct gaagaataag caccggctaa ctacgtgcca gcagccgcgg
      781 taatacgtag ggtgcgagcg ttaatcggaa ttactgggcg taaagcgggc gcagacggtt
      841 acttaagcag gatgtgaaat ccccgggctc aacccgggaa ctgcgttctg aactgggtga
      901 ctcgagtgtg tcagagggag gtggaattcc acgtgtagca gtgaaatgcg tagagatgtg
      961 gaggaatacc gatggcgaag gcagcctcct gggataacac tgacgttcat gtccgaaagc
     1021 gtgggtagca aacaggatta gataccctgg tagtccacgc cctaaacgat gtcaattagc
     1081 tgttgggcaa cttgattgct tggtagcgta gctaacgcgt gaaattgacc gcctggggag
     1141 tacggtcgca agattaaaac tcaaaggaat tgacggggac ccgcacaagc ggtggatgat
     1201 gtggattaat tcgatgcaac gcgaagaacc ttacctggtt ttgacatgtg cggaatcctc
     1261 cggagacgga ggagtgcctt cgggagccgt aacacaggtg ctgcatggct gtcgtcagct
     1321 cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca acccttgtca ttagttgcca
     1381 tcattcggtt gggcactcta atgagactgc cggtgacaag ccggaggaag gtggggatga
     1441 cgtcaagtcc tcatggccct tatgaccagg gcttcacacg tcatacaatg gtcggtacag
     1501 agggtagcca agccgcgagg cggagccaat ctcacaaaac cgatcgtagt ccggattgca
     1561 ctctgcaact cgagtgcatg aagtcggaat cgctagtaat cgcaggtcag catactgcgg
     1621 tgaatacgtt cccgggtctt gtacacaccg cccgtcacac catgggagtg ggggatacca
     1681 gaagtaggta gggtaaccgc aaggagtccg cttaccacgg tatgcttcat gactggggtg
     1741 aagtcgtaac aaggtagccg taggggaacc tgcggctgga tcacctcctt tctagagaaa
     1801 gaaggggctt taggcattca cacttatcgg taaactgaaa agatgcggaa gaagcttgag
     1861 tgaaggcaag gttcgcttaa gaagggaaac cgggtttgta gctcagctgg ttagagcaca
     1921 cgcttgataa gcgtggggtc ggaggttcaa gtcctcccag acccaccaag aacgggggca
     1981 tagctcagtt ggtagagcac ctgctttgca agcagggggt catcggttcg atcccgtttg
     2041 cctccaccaa aactttacaa atgaaagcaa gtttgctgtt tttagcagct tattttgatt
     2101 tgcgaagtag aataacgacg catcgatctt taacaaattg gaaagccgaa atcaacaaac
     2161 aaagacaatg agtttgtttt gattttttat tctttgcaaa ggataaaaac ctctcgcaag
     2221 agaaaagaaa acaaacatag tatttgggtg atgattgtat cgacttaatc ctgaaacaca
     2281 aaaggcagga ttaagacaca acaaagcagt aagctttatc aaagtaggga tttcaagttt
     2341 gcttacttag tcaacgggta ggtaaacgaa gtcaaagaag ttcttgaaat gatagagtca
     2401 agtgaataag tgcatcaggc ggatgccttg gcgatgatag gcgacgaagg acgtgtaagc
     2461 ctgcgaaaag cgcgggggag ctggcaataa agctatgatt ccgcgatgtc cgaatgggga
     2521 aacccactgc attctgtgca gtatcctaag ttgaatacat aggcttagag aagcgaaccc
     2581 ggagaactga accatctaag tacccggagg aaaagaaatc aaccgagatt ccgcaagtag
     2641 tggcgagcga acgcggagga gcctgtacgt aataactgtc gagatagaag aacaagctgg
     2701 gaagcttgac catagcgggt gacagtcccg tattcgaaat ctcaacagcg gtactaagcg
     2761 tacgaaaagt agggcgggac acgtgaaatc ctgtctgaat atggggggac catcctccaa
     2821 ggctaaatac tcatcatcga ccgatagtga accagtaccg tgagggaaag gcgaaaagaa
     2881 ccccgggagg ggagtgaaac agaacctgaa acctgatgca tacaaacagt gggagcgccc
     2941 tagtggtgtg actgcgtacc ttttgtataa tgggtcaacg acttacattc agtagcgagc
     3001 ttaaccggat aggggaggcg tagggaaacc gagtcttaat agggcgatga gttgctgggt
     3061 gtagacccga aaccgagtga tctatccatg gtcaggttga aggtgccgta acaggtactg
     3121 gaggaccgaa cccacgcatg ttgcaaaatg cggggatgag ctgtgggtag gggtgaaagg
     3181 ctaaacaaac tcggagatag ctggttctcc ccgaaaacta tttaggtagt gcctcgagca
     3241 agacactgat gggggtaaag cactgttatg gctagggggt tattgcaact taccaaccca
     3301 tggcaaactc agaataccat caagtggttc ctcgggagac agacagcggg tgctaacgtc
     3361 cgttgtcaag agggaaacaa cccagaccgc cggctaaggt cccaaatgat agattaagtg
     3421 gtaaacgaag tgggaaggca cagacagcca ggatgttggc ttagaagcag ccatcattta
     3481 aagaaagcgt aatagctcac tggtcgagtc gtcctgcgcg gaagatgtaa cggggctcaa
     3541 atctataacc gaagctgcgg atgccggttt accggcatgg taggggagcg ttctgtaggc
     3601 tgatgaaggt gcattgtaaa gtgtgctgga ggtatcagaa gtgcgaatgt tgacatgagt
     3661 agcgataaag cgggtgaaaa gcccgctcgc cgaaagccca aggtttccta cgcaacgttc
     3721 atcggcgtag ggtaagtcgg cccctaaggc gaggcagaaa tgcgtagtcg atgggaaaca
     3781 ggttaatatt cctgtacttg attcaaatgc gatgtgggga cggagaaggt taggttggca
     3841 agctgttgga atagcttgtt taagccggta ggtggaagac ttaggcaaat ccgggttttc
     3901 ttaacaccga gaagtgatga cgagtgtcta cggacacgaa gcaaccgata ccacgcttcc
     3961 aggaaaagcc actaagcttc agtttgaatc gaaccgtacc gcaaaccgac acaggtgggc
     4021 aggatgagaa ttctaaggcg cttgagagaa ctcgggagaa ggaactcggc aaattgatac
     4081 cgtaacttcg ggagaaggta tgccctctaa ggttaaggac ttgctccgta agccccggag
     4141 ggtcgcagag aataggtggc tgcgactgtt tattaaaaac acagcactct gccaacacga
     4201 aagtggacgt atagggtgtg acgcctgccc ggtgccggaa ggttaattga agatgtgcaa
     4261 gcatcggatc gaagccccgg taaacggcgg ccgtaactat aacggtccta aggtagcgaa
     4321 attccttgtc gggtaagttc cgacccgcac gaatggcgta acgatggcca cactgtctcc
     4381 tcccgagact cagcgaagtt gaagtggttg tgaagatgca atctacccgc tgctagacgg
     4441 aaagaccccg tgaaccttta ctgtagcttt gcattggact ttgaagtcac ttgtgtagga
     4501 taggtgggag gcttggaagc agagacgcca gtctctgtgg agtcgtcctt gaaataccac
     4561 cctggtgtct ttgaggttct aacccagacc cgtcatccgg gtcggggacc gtgcatggta
     4621 ggcagtttga ctggggcggt ctcctcccaa agcgtaacgg aggagttcga aggttaccta
     4681 ggtccggtcg gaaatcggac tgatagtgca atggcaaaag gtagcttaac tgcgagaccg
     4741 acaagtcggg caggtgcgaa agcaggacat agtgatccgg tggttctgta tggaagggcc
     4801 atcgctcaac ggataaaagg tactccgggg ataacaggct gattccgccc aagagttcat
     4861 atcgacggcg gagtttggca cctcgatgtc ggctcatcac atcctggggc tgtagtcggt
     4921 cccaagggta tggctgttcg ccatttaaag tggtacgtga gctgggttta aaacgtcgtg
     4981 agacagtttg gtccctatct gcagtgggcg ttggaagttt gacgggggct gctcctagta
     5041 cgagaggacc ggagtggacg aacctctggt gtaccggttg taacgccagt tgcatagccg
     5101 ggtagctaag ttcggaagag ataagcgctg aaagcatcta agcgcgaaac tcgcctgaag
     5161 atgagacttc ccttgcggtt taaccgcact aaagggtcgt tcgagaccag gacgttgata
     5221 ggtggggtgt ggaagcgcgg taacgcgtga agctaaccca tactaattgc ccgtgaggct
     5281 tgactctatc atttgaagga cttcaagaga taaaagctta ctgactgatt cagtcattac
     5341 cgaatatatt gattaaggct ttaccgattt gcaacagttt aagtttggcg gccatagcga
     5401 gttggtccca cgccttccca tcccgaacag gaccgtgaaa cgactcagcg ccgatgatag
     5461 tgtggttctt ccatgcgaaa gtaggtcact gccaaacacc ctttcagaaa acccccggat
     5521 atccgggggt ttttgctttg cccggaaaaa atgtcgggga tggcgggacg gcatctgtac
     5581 ggtgtccggt cgggtttgcg gaggaacggc ttgaaacttt gggatattca ttttagaatg
     5641 acccgtttta tagcggatta acaaaaatca ggacaaggcg gcgggccgca ggcagtacgg
     5701 atagtacgga accggttcgc ccggtgcttc atcaccttag ggaatcgttc cctttgagcc
     5761 ggggcggggc aacgccgtac cggtttttgt taatccgcca tatcgtcgca agatgcggtt
     5821 tgttgtttgc aacccttaaa ggaaaaacca tgaaaaaaat gtttgtattg ttctgtatgc
     5881 tgttctcctg cgccttctcc cttgcggcgg taaacatcaa tgcggcttcg cagcaggagc
     5941 tggaggcgct gccgggcata ggcccggcga aggcgaaggc cattgcggaa taccgcgcgc
     6001 aaaacggcgc gttcaagtct gtggacgatt tgatcaaggt gaagggcatc ggtccggcgg
     6061 tgctggcgaa gctgaaagac caggcttccg tcggcgcgcc cgcaccaaaa ggccccgcca
     6121 aaccggtgct gcctgcggtt aaaaaatagg ggaacctgta aaggaagggg catcggctgc
     6181 cgccggcgct tttttgttct ttgtttggaa gggaaatggc tggagaaaga cctgcgctat
     6241 atcggggaat gaatcgatgc aaaggaaat
//
LOCUS       DAWXHA010000111         6208 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.111, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000111 DAWXHA010000000
VERSION     DAWXHA010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6208
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.111"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            279..725
                     /gene="yciA"
                     /locus_tag="AABD07_001786"
     CDS             279..725
                     /gene="yciA"
                     /locus_tag="AABD07_001786"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HFB2356260.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVEVWVKTL
                     MNDCVTEDRHLVTEAVFTYVAIDAEGNPRPIPKEGNPKLSGLLATP"
     gene            complement(776..1597)
                     /locus_tag="AABD07_001787"
     CDS             complement(776..1597)
                     /locus_tag="AABD07_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFB2356261.1"
                     /translation="MAVLITGASAGFGEAMCRTFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSCRESVENVLNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDNERVAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKTAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1716..2174
                     /locus_tag="AABD07_001788"
     CDS             1716..2174
                     /locus_tag="AABD07_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFB2356262.1"
                     /translation="MKTQISLAATALALFLSACGNGGAPAQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2317..3453)
                     /gene="lst"
                     /locus_tag="AABD07_001789"
     CDS             complement(2317..3453)
                     /gene="lst"
                     /locus_tag="AABD07_001789"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HFB2356263.1"
                     /translation="MGLKKVCLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGKPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFYLPYGLNKSFNFIPTMAELKVKSMLLPKVRRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTNNLIRESSYLGDEFYVNGAIKRNFARMMVGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTALNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFRQADIPILAFDDKNQSHGKSK"
     gene            3590..3730
                     /locus_tag="AABD07_001790"
     CDS             3590..3730
                     /locus_tag="AABD07_001790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/arginine repetitive matrix 2"
                     /protein_id="HFB2356264.1"
                     /translation="MPPHIRHNAADAAAKRGKAISPFLSRRRVQTRQDRTKREQSRQN
                     MP"
     gene            3798..6023
                     /locus_tag="AABD07_001791"
     CDS             3798..6023
                     /locus_tag="AABD07_001791"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HFB2356265.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPGANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWAKDSKTHVATMQSGDFFHNEQSVTVPDATSVSIVFTDKQGNKKELREPVALK
                     AGEIIDAAVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLIANLDKLDADTRAAVEAEITAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGNVLMQHD
                     VEAGGIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFAPLAAALTADEAKIVEELSAVQGKAVDIGGYYAANPEKAAQAMRPSATFNQVLNA
                     L"
BASE COUNT         1623 a         1847 c         1423 g         1315 t
ORIGIN      
        1 atgcggaatc tagagaaacc ttttaaccga taagtttccg tgcggacagg tctggattcc
       61 cgcctgcgcg ggaatgacgg ttcggttgct tagggtagga tttggcggga ttggtgggct
      121 gaagcccgcc ctacgcatcc gccctacaat actccttgcg aatctgtccc gcgcccgacc
      181 ttgtatgtct caaatgggtt aaactacgca cttcccgact tcccgtttcg ggcaggggtg
      241 caggtccgat ttatatttca ataaaacaag gaaactttat gcagcacgaa gaaggcaacc
      301 gccaacgccc tcaaggcgaa ctgctcctgc gtaccgtcgc tatgccgcgc gataccaatc
      361 ccaaccaaga cattttcggc ggctggatta tgtcgcaaat ggatttgggc ggcggcatat
      421 tggcggcgga aatcgcgcgg gggcgcatcg ttaccgtcgc cgttcaggaa atgaacttca
      481 tccgcccggt caaggtcggc aacgtcgtct gctgctacgg gcattgcgtc cgcgtgggca
      541 atacttccct ccagcttaaa gtcgaagtct gggtgaaaac tttgatgaac gattgcgtta
      601 ccgaagaccg ccatctcgta accgaggcgg tgttcactta tgtcgccatc gatgcggaag
      661 gcaatccgcg cccgattccg aaagaaggca accccaaatt gtcaggctta ttggccaccc
      721 cgtaagaata cccgtaaaaa tgccgtctga aactgtcttc agacggcatt ccgtatcatt
      781 tgaaccaaga cctgatgcgg gaaaacagcg acatactctg tttttcaaag tcttcccgca
      841 cttcgggcac ggctgttttt atgaccttca ttcctgcaaa agtctgcgcc acaggcataa
      901 tttcaatcgt gttcacattc atatgcgccg gccggcggta cagccacaat gcggtttccg
      961 caatatcttc ggggcggata aattccacac cctcatacac gcccgccacc ctctcgttat
     1021 cgcctttgaa gcgcacgttg gaaaactccg tattgccgca caaacccggc tcgatattgg
     1081 taacgcggat gttcttatcc gccagctctg cgcgcaaatt caggctaaac tggcgcacaa
     1141 acgccttggt cgccccgtaa acgttgctgc cggcataagc ataattgcct gcaatcgaac
     1201 ccaaattcat cacataaccg ccgccgcgtt ccaccatttg cggcaaaatc ttgcgcgtca
     1261 ggaacgtcaa acccaaaaca ttggtttgaa tcattgtttc ccaatcttca aaatccgcct
     1321 tgtccgccgt gtccaaaccc aaagccagcc cggcattgtt gatgaggcag tcgatgtcgg
     1381 aaaattcatc ggggatgccg ttcaagacgt tttccaccga ctcgcggcac gacacgtcca
     1441 tttccaaagg gtaaaacaaa gcacccaatt catccgccaa agcctgaagc ctgtccgcac
     1501 ggcgcgccgc accgataacg cggtatcccg ccccgacaaa cgtgcggcac atcgcttcgc
     1561 cgaagcctgc cgaagcaccg gtaattaaaa cagccattgt ttttcctttc tttctcgttt
     1621 cccaaacctg tttcaggtat cataacaccc ttcagacggc atcgcgccgg ctgaaaacga
     1681 caacaaccgt accaccacga caggacacat tcaacatgaa aacccaaatc agccttgccg
     1741 caaccgccct cgccctattc ctttccgcct gcggaaacgg cggcgcgccc gcacagccca
     1801 aaggcgaaat ttccgaaaac cgcaccgccg cgttcaaatc tatgatgccc gacttctcgc
     1861 gtatgggcaa aatggtcaaa ggcgaagagc cttacgatgt cgaaaaattc aaacaggcgg
     1921 cggcggcgtt tgccgaaagc agcaaaaaac cgttcacact ttttgagtcc gatccgcaag
     1981 gcaacggccg cgccctgcct gccgtttggt cggatggtgc aaaatttgaa gccgaaaaaa
     2041 caaaattcgc cgccgccgtc gagaaactca acgccgccgc ccaaaccggc aaactggacg
     2101 aaatcaaagc cgcctacggg gaaaccggcg caagctgcaa atcctgccac gacagtttcc
     2161 gcgcaccgga ataacatccg aaacaaaaca atgccgtctg aagccttcag acggcatttt
     2221 ctttgtcatt tcggcacacg caaagcaatc ggaaattatc ttcaattcaa aaaatacgcc
     2281 atatcctgat ttttgcctta cttactccgc cattttctat tttgatttac catgcgattg
     2341 atttttatcg tcaaatgcca aaatcggaat gtcggcctga cggaacagcg cataaacggg
     2401 cttgagccaa taatcttccg gaagggaagc cggtttcaat gcgtaaacgt gcacattggg
     2461 aaaatccttc atcgtcaacg ccgcaccgct gaaaaaggta taaatttcat accttgtatg
     2521 cgggtttttc ttaatttcgc gcaaaatata gtcttcgatg acatagggcg aatttaacgc
     2581 ggttacgccg gaaagcccgt aggtctggcg gggatgcggc gcgacatatt gtatgttgaa
     2641 attttttgcc gccttttccg aaatttcctt catctctttg tcgggcgaac ccaaaagtat
     2701 ccgcaccgtg ccgcccgttt cgtcccccgc cttcagttcg gacgcatcga acagcggcag
     2761 gtaagtcatc ttgcggcggc cgtcgtccat aatgtttttc aaacccttga atatcgtgta
     2821 atgctcgtcg gaagcattgc gggttttggc gatgctccaa tccccgacca tcattcgggc
     2881 aaaattccgc ttaatcgccc cgtttacata aaactcatcg cccaaatagc tgctctcccg
     2941 tatcaggttg tttgtgccgt cgtcaaaggt cttgatttcc gcatccgggt aagtgctcaa
     3001 aaaggcggcg atgctgactt tttccaaact cgccaaataa atccgcctga ccttcggcag
     3061 cagcatcgac ttcaccttca gctccgccat cgtcggaatg aaattaaacg atttgttcaa
     3121 accgtagggc aggtagaaaa aatacgcccg ctccgcctta tcctttatct gattgaaata
     3181 ataatcgtat ttttcattcc tgttttcaga catcagcacc acataaaacc gctcccccgg
     3241 atgctgcgcc ataatccttt ctgccacctt catctgcaat atggtatagc agaaaatcag
     3301 attgacgggt ttcccctctt cattgaagag tttgtccttc agcagggaaa ccgcgttcct
     3361 ttccccctga tttacccggt caaacgtata aaatatcccg aagcaaaaaa caatcaggca
     3421 caacacggtc aaacagactt ttttcaaccc catatcccta aaaactccat tccgacaaat
     3481 tgaacatacg ccccgagtgt cccggtgcgg aaactccggt gcggaaaatg cggaatttta
     3541 gcagatattc cgacagttgc cgaatattaa aattaatttt accgaaaatg tgccgccgca
     3601 catcaggcac aacgccgccg acgccgccgc caaacgcggg aaagccattt cccccttcct
     3661 ttcccgccgc cgcgttcaaa cacgccaaga tcgaacaaag cgcgaacaaa gccgccaaaa
     3721 tatgccataa tagccgcgca cattcccccg cgcaatgtgt ttcaaaagaa aaaaccaacc
     3781 tacaagagaa taatcctatg actcaaaaat ccaccattgt ttatacccat accgacgaag
     3841 cccccgcgct ggcgacccaa tcgctgctgc cgattgtgca ggcgtttgcc cgccacgccg
     3901 atattgatgt caaaactgcc gacatttccc tgtccggccg cattttggcg gcattccccg
     3961 aatatctgac cgaagcgcag cgcgtacccg acgcgcttgc cgaattgggc gaactggtga
     4021 aacaacccgg tgcaaacgta atcaaactgc cgaacatcag cgcatccgta cctcaactga
     4081 ccgccgcgat taaagaattg cagtctaaag gctttgccgt tcccgactat cctgccgacc
     4141 ctcaaaccga tgaagaaaaa gccgtacgcg aacgctacga ccgcatcaaa ggcagcgcgg
     4201 taaaccctgt cctgcgcgaa ggcaactccg accgccgcgc gcctaaagcg gtgaaaaact
     4261 ttgccaaaaa aaatccgcac agcatgggcg cgtgggcgaa agactccaaa acccacgttg
     4321 ccaccatgca aagcggcgac tttttccata acgaacaatc cgttaccgta cccgatgcga
     4381 cttccgtatc catcgtgttc accgacaaac aaggcaataa aaaagagctg cgcgagcctg
     4441 ttgccctgaa agccggcgaa atcattgacg cggccgtaat gagcaaaaaa gccctgctcg
     4501 ccttccttgc cgaacaagtg aaagacgcaa aagctaaagg cgtattgttc tcgctgcata
     4561 tgaaagccac gatgatgaaa gtgtccgacc cgattatctt cggacacgcc gtcaaagtgt
     4621 tcttcgcgcc tgtatttgaa aaattcggcg gcaaactggc tgccgcaggc gtcaacgtca
     4681 acaacggctt cggcaacctg attgccaatc tggacaaact ggatgcggac acccgcgccg
     4741 ccgtcgaagc tgaaatcacc gccgtttacg ccgccaaccc ggatttggcg atggtcgatt
     4801 ccgacaaagg catcaccaac ctgcacgttc ccagcgatgt catcgttgat gcttctatgc
     4861 ctgcgatgat ccgcaattcc ggccgtatgt gggacaaaaa cggcaaagcg caagacacca
     4921 aagccgtgat tcccgacagc agctatgccg gtgtttacca agcaaccatc gatttctgcc
     4981 gcgaacacgg cgcattcgat ccgacaacaa tgggtactgt gcccaacgtc ggactgatgg
     5041 cgcaagcggc ggaagaatac ggctcacaca acaaaacctt tgaaatcgaa gccgacggtc
     5101 aggttcaagt gattgatgcg gcgggcaatg tcctgatgca gcacgacgtt gaggcaggcg
     5161 gcatctggcg catgtgccaa accaaagacg ctcccgtcaa agactgggta caactcgccg
     5221 tcaaccgcgc ccgcctgagc aacacgcccg ccgtgttctg gctcgacgaa aaccgtccgc
     5281 acgacaagag tctgctcgcc aaagtcaaag cctaccttgc cgaattggat accaacggcc
     5341 tcgacatccg cgtcctcgcg cccgaagaag ccgctaaatt cagcttgggc cgtctgaaaa
     5401 acggcgaaga caccatttcc gtaaccggca acgtcctgcg cgattatctg accgacttgt
     5461 tcccgatttt ggaactgggt accagcgcga aaatgctgtc catcgttcca ttgatgaacg
     5521 gcggcggtat gtttgaaacc ggcgcgggcg gttctgcacc gaaacacgtc caacagttcc
     5581 tcgaagaaaa ccacctgcgt tgggactcat tgggcgaatt cctcgcgctt gccgtatcgt
     5641 ttgaacatct ggcgcaaaaa accggcaacg ccaaagccca agtcctcgcc gacactttgg
     5701 atgccgccac cgaaaaactg ctgttgaacg acaaatcgcc caaacgcaaa gcgggcgaac
     5761 tcgacaaccg cggcagccat ttctacctca ccctctactg ggcgcaagaa ttggcggcgc
     5821 aagacaaaga tgccgaactg aaagccgcat ttgctccatt ggcagccgct ttgactgccg
     5881 acgaagccaa aatcgttgaa gaactctctg ccgtacaagg caaagcggtc gacatcggcg
     5941 gctactacgc agccaatcct gaaaaagccg cacaagcgat gcgtccgagc gcaaccttta
     6001 atcaagtact aaacgcctta taagcacaaa ggcaaaaatg ccgtctgaac attcgtcgtt
     6061 cagacggcat tagttatccc tatctgcctg attatgatta aacgccgcac ccattggata
     6121 tatagtggat taacaaaaac cagtacggcg ttgccccgcc ttagctcaaa gagaacgatt
     6181 ctctaaggtg ctgaagcacc aagcgaac
//
LOCUS       DAWXHA010000112         6114 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.112, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000112 DAWXHA010000000
VERSION     DAWXHA010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6114
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.112"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            46..807
                     /locus_tag="AABD07_001792"
     CDS             46..807
                     /locus_tag="AABD07_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356266.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGKTGYKPVTAQYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLLSESGKTQTVRNIVV
                     KPKPLKAYNLTVADWHTYFVKGDKAETEGVWVHNDCPTKLKPTERYNRQTHYGGSQTD
                     GARAQAARQAGEGKPCPTCGRIQIFGTKTAPSPQHEPPLVKHYYEHGGHSMSNADRAK
                     HARESIKGTQCLTCQRKEGAMMSRYSREQAKKHGL"
     gene            797..1345
                     /locus_tag="AABD07_001793"
     CDS             797..1345
                     /locus_tag="AABD07_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFB2356267.1"
                     /translation="MDYNQTVLSHLQKFWKHHDIKGFTWTLGRIVEELPDFQVFQVIP
                     NHEDEPWVYVSSGIGQFLGQEFFIISPFETPEHIETLAMLASASMHYPDQFQLGKTVN
                     IGRPWVEQSSFRHFLISLPYPYGQELEYMDNVRFFWLLPITQTERLFLNTHSVEELET
                     KFDEAGIDYLDINRASTVWQAG"
     gene            1642..1995
                     /locus_tag="AABD07_001794"
     CDS             1642..1995
                     /locus_tag="AABD07_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356268.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQTGLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            1985..2308
                     /locus_tag="AABD07_001795"
     CDS             1985..2308
                     /locus_tag="AABD07_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HFB2356269.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKPMIIEFFIDGSQKNLQSIES
                     QLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFGIAQKNDCNYEGF
                     GSYGN"
     gene            2367..2594
                     /locus_tag="AABD07_001796"
     CDS             2367..2594
                     /locus_tag="AABD07_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356270.1"
                     /translation="MEIKFNTLGVILNGVNPEEKFIKIIDDQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            2721..3264
                     /locus_tag="AABD07_001797"
                     /pseudo
     CDS             2721..3264
                     /locus_tag="AABD07_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
     gene            3399..4130
                     /locus_tag="AABD07_001798"
     CDS             3399..4130
                     /locus_tag="AABD07_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pretoxin"
                     /protein_id="HFB2356271.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTARYGNPYR
                     ETVYIKVSDGIGNSQTLISNRIHSFYSGGKWIKAEDLKAGSRLLSESGRTQTVRKTVV
                     KPKPLKAYNLTVADWHTYFVKGSQAETEGVWVHNDCPYGKGNQRYKDAPYHGKNDNSV
                     KSRAPTNGQAVLDNSVQVKSTSSQRVGVDKTNNEIVVLNQTRIFNDGSAEYHGHVRNW
                     KNLHTDQQNALKKAGLVNSKGKIKK"
     gene            4127..4462
                     /locus_tag="AABD07_001799"
     CDS             4127..4462
                     /locus_tag="AABD07_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356272.1"
                     /translation="MMADKEQVEKMIYSENKDCVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLRSKQGNPDFQGFAEDALDDI
                     SFFIFKKRP"
     gene            4522..5034
                     /locus_tag="AABD07_001800"
     CDS             4522..5034
                     /locus_tag="AABD07_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356273.1"
                     /translation="MGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLFAENGAEQTVQ
                     SVTVKPEPLKAYNLTVADWHTYFVKGSQAETEGVWVHNDCPPKPKPTNHAQQRKEEAK
                     NDSHRSVGDSNRVVREGKQYLDSDTGNHVYVKGDKVVILTPDGRQVTQFKNSKANTSK
                     RVKNGKWTPK"
     gene            5012..5293
                     /locus_tag="AABD07_001801"
     CDS             5012..5293
                     /locus_tag="AABD07_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356274.1"
                     /translation="MGNGHQNNQSSLEKRIFYLEHSGQYLMICALSDYSQNKHTVVMA
                     NFLYPNEKMDWRNLDDLFNELVLEELQSSFMDWYPTIEKAISHHLEDFS"
     gene            5349..5948
                     /gene="mafB"
                     /locus_tag="AABD07_001802"
                     /pseudo
     CDS             5349..5948
                     /gene="mafB"
                     /locus_tag="AABD07_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
BASE COUNT         2040 a         1139 c         1296 g         1639 t
ORIGIN      
        1 ggggattttt ctaaatccta cacctgctcc ttccacggca gcaccttggt caaaacggca
       61 gacggctaca aagccattgc ccatattcaa gccggagacc gcgtcctttc caaggacgag
      121 gcaagcggga aaacaggata caaacccgtt accgcccaat acggtaatcc gtatcaagaa
      181 accgtttaca ttaaagtttc agacggcatc ggcaacagcc aaaccctgat ttccaaccgc
      241 atccatccgt tttattcgga tgggaaatgg attaaagcgg aagatttgaa agcgggaagc
      301 cggctgttat ccgaaagcgg caaaacccaa accgtccgca acatcgttgt caaaccaaaa
      361 ccgctcaaag cctacaatct gaccgttgcc gattggcata cctactttgt caaaggcgat
      421 aaggcggaaa cggaaggggt ttgggttcat aatgattgtc caaccaaact aaaaccgaca
      481 gaacgttata atcgtcaaac gcattatgga ggttctcaaa cagatggagc aagggctcag
      541 gcagcaagac aggcaggaga aggtaaacct tgtccaactt gtggtagaat tcagatattt
      601 ggtacgaaaa ccgcaccaag tccgcaacat gaacccccat tagtaaaaca ttactatgaa
      661 catggtggtc actctatgag caatgctgat cgagcgaaac atgccaggga aagcataaaa
      721 ggaactcaat gtttaacatg tcaaaggaaa gagggtgcga tgatgtcaag atattcgaga
      781 gaacaggcta aaaagcatgg actataacca aactgtttta tctcacttgc aaaaattttg
      841 gaaacatcat gatattaaag gatttacttg gactttagga agaattgttg aagaacttcc
      901 cgatttccaa gttttccaag tgattcctaa tcatgaagat gagccttggg tttatgtcag
      961 ctctgggata ggtcaatttt tagggcagga gttttttatc atcagcccgt ttgaaacacc
     1021 tgaacatatt gagaccttgg caatgctggc atctgcaagt atgcattatc ctgatcaatt
     1081 tcaattaggg aaaaccgtca atatcggtag accgtgggtc gagcaatcat ccttccggca
     1141 ttttctgatt tctctgcctt atccttatgg gcaagagttg gaatatatgg ataatgtccg
     1201 atttttctgg ttattgccaa ttacccagac agaaagactt ttcttgaata ctcattcggt
     1261 agaagaattg gaaacgaaat ttgatgaagc gggtattgat tatttagata taaatcgtgc
     1321 gagtactgtc tggcaggcag gataaaaatt cggcaatcaa aatgccgtct gaaacaagtt
     1381 tggactttca gacggtattc tgatgaatgg aacaggatac tgggaactga gttcttcaaa
     1441 aatcctatct ccgtccctta tacgtcggtg ctttagtcaa aacggcagac ggatgaaaaa
     1501 ttattgcccg tatccttgcc aaagatgaag caagatgaag ccaggtaatt gaatcggtac
     1561 aagcgcaatg tccgacttgt tctgcaaaac agggagggag attaagccaa tattcaaaag
     1621 aacagaaaaa gaaactgagt aatgggaata aaaaatgaac aaataataat ttgtaaaaaa
     1681 tataatacag aaatatatcc tgtttccgat gtttcaaaaa tcggtgttgc tgaaaatgtc
     1741 aaacagacag gcctgtatcc gattaacggg ttaaggcacc gtcccaaagg tgatactaac
     1801 ggttggtata tctgggccgg tgaaaacttc tcctatgata aaaatttttt cctgcccttg
     1861 catacgttcc atttgcaaat atggcgaccc gaaatcatcc cctttttgac acttccgccc
     1921 ggttaccgtt ttttaattgg ggaaaacggt tatgaagacg tatggtttga tgagttgcta
     1981 ttaaatgata attgacgaaa aatctacttc agatgtactg aaacaatatc aagaactagg
     2041 gtttgatttg acaaaaccta tgataataga gttttttata gatggttctc aaaagaatct
     2101 gcaatcaata gaaagccaac tcatttctta tcggcaagat tttcaaatca gtattgaaca
     2161 agatgaattc ggagaaatgt ggacttgcta ttgttccgtc aatatcgtcc cttcccttga
     2221 aaacatttta gctattgaaa ctacgttatt tggtattgca caaaaaaatg attgtaatta
     2281 tgaaggtttt ggttcgtatg ggaactaaca aaaagtgtag gttgggttga aaaaaccata
     2341 ttcccattaa agattagggg atgtctatgg aaataaaatt caatactttg ggggttatcc
     2401 tgaatggagt caatcctgaa gaaaaattca taaaaattat tgatgaccag gaaaataccg
     2461 gtggatttct gatactgtta tcttcaaatg acaaattctc atcatttgac agttacgatg
     2521 actgggtcga aaacttagaa atattaaaag aatacctgca agaatctcat tggataataa
     2581 agtgggtcgg atagtcggca aacgtagtcc gtttgaaacg cttttacttt tcagacggac
     2641 tttctaccaa tgggaacaag gcgttttgtc tcaatccggt ttatgattat tcgatacagt
     2701 gatgggaagc taagaaaaat atgattaatc atattgaaaa atatataggc actatttctc
     2761 atggctcgaa aagcgattcg ggaagtcagt acaaattaaa tatcgcagct attccctctt
     2821 cccctaacag ggatttaaaa acttatatta ctttagggtt aagcaaacat gatctgaatt
     2881 ataaaagcag atttgaaata ctttttgtat gttctttaaa atatgatgaa aatcagattt
     2941 tcccattttt aagatggtta gcagaaacca tcattgagaa taaaaaaaat ccttcttcgg
     3001 gggcaggttg tttatttgcc tagaagcatt gttaattcaa caaaaatgga tgcactgtat
     3061 gtttccgccc cattttattt cgacgatgat ttccaagtct gttatggcga acactacaat
     3121 attgttttcc ctttgcttgt ccccttgtat aaacaggaag ccgaattggt ggaaaaaaag
     3181 ggttggaatg cttttgagca gttcttgttg gataatgaag ttggcaacct ttcggatatg
     3241 aataggaaac cgtttgtttg gtaagggctt tcttaaattt gattaaaggt cgtctgaaac
     3301 cgtgtttaac tttcagacaa cctttccttc atttgaaaca gaatattgaa aactaagttc
     3361 ttcaaaaatc ctacacctgc tccttccacg gcagcacctt ggtcaaaacg gcagacggct
     3421 acaaagccat cgcccatatt caagccggag accgcgtcct ttccaaggac gaggcaagcg
     3481 gagaaacggg atacaaaccc gttaccgccc gatacggtaa tccgtatcgg gaaaccgttt
     3541 acattaaagt ttcagacggc atcggtaaca gccaaaccct gatttccaac cgcatccact
     3601 cgttttattc gggcggcaaa tggattaagg cggaagattt aaaagcggga agcagactgt
     3661 tatccgaaag cggcagaacc caaaccgtcc gcaaaaccgt tgtcaaacca aaaccgctca
     3721 aagcctacaa tctgaccgtt gccgactggc atacctactt cgtcaagggc agtcaggcgg
     3781 aaacggaagg ggtttgggtt cataatgatt gtccgtatgg aaaaggcaac caacgatata
     3841 aagatgctcc ttatcatggt aaaaatgata attctgtgaa aagtagagcg ccaacaaatg
     3901 ggcaagctgt ccttgataac tctgttcaag ttaaatcgac atcttctcaa agagttggag
     3961 ttgataaaac caataatgaa atcgttgtat taaaccaaac tagaattttt aatgacggtt
     4021 ctgctgagta tcatgggcat gtaaggaact ggaaaaattt acatactgat caacaaaatg
     4081 ctttaaagaa agcaggattg gttaattcaa aaggaaaaat caaaaaatga tggctgataa
     4141 ggaacaagta gaaaagatga tttattctga aaataaagat tgtgttattg atggtatgct
     4201 cggtatgacc ttcagctcgg aggaggatga aatcccttgg atttccgaga aattgacgga
     4261 gttgtcgaag cataaagact tggatattgc cagattgtca ttaacctgtt tcggacatct
     4321 cgccaggatg catgaaaata tcggcgattg cgataaagtg attgctttat tgcgctcaaa
     4381 acaaggtaat ccggattttc aaggttttgc cgaagatgcg ttagacgata tttccttctt
     4441 tatatttaaa aagcgtccgt aagcgcggat taaacccgga aatccgatgc gtctgaaagt
     4501 acattccggc tttcagacgg catcggtaac agccaaaccc tgatttccaa ccgcatccat
     4561 ccgttttatt cggacggcaa atggattaaa gcggaagatt tgaaagcggg aagcaggctg
     4621 tttgctgaaa acggtgcaga gcagaccgtt caaagcgtta ccgtcaaacc ggaaccgctc
     4681 aaagcctaca atctgaccgt cgccgactgg catacttatt tcgtcaaggg tagtcaggcg
     4741 gaaacggaag gagtttgggt tcataatgat tgtccgccta aaccaaaacc aaccaatcat
     4801 gcccaacaaa gaaaagaaga agctaaaaac gattctcatc gaagtgtggg agattccaat
     4861 cgtgtcgttc gcgaaggaaa gcaatattta gattccgaca caggaaacca tgtttatgta
     4921 aaaggagata aagtggttat tctaactcct gatggaagac aggtaactca atttaagaac
     4981 tcgaaagcca atacgtcaaa aagggtaaaa aatgggaaat ggacaccaaa ataatcaatc
     5041 ttccttagaa aaaagaattt tttatctgga gcattcgggg cagtatctga tgatttgcgc
     5101 cctatcggat tactcccaaa ataaacatac tgtcgttatg gcgaatttcc tctatccaaa
     5161 tgaaaaaatg gattggagaa atttagatga tttgttcaat gagttggttt tagaggaatt
     5221 acagtcttca tttatggatt ggtatccaac tattgaaaag gcaattagcc atcatttaga
     5281 agacttttcg taacaagcat aaatcaaaaa gtcgtctgaa actgctttta attttcagac
     5341 gacctttccc catatcggcg gattatgaat ttacagctat cgggaaattg agttatctct
     5401 ctgatagaga aaattccata cgcgaagccg ttgaccggtg gatacaggaa aatcccaatg
     5461 ccgccgaaac cgtcgaagcc gtcttcaacg ttgccgcagc agccaaagtc gcgaagttgg
     5521 caaaggcggc aaaaccaggg aaggctgcgg ttagcgggga ttttgctgat tcttataaaa
     5581 agaaattggc tttgtctgat agtgcgagac agttatatca aaatgcaaag tatagagaag
     5641 ctctagatat acattatgaa gatttaatta gaagaaaaac cgatggtaca tcaaaacttg
     5701 ttaacggtag agaaattgac gctgttacga atgatgcttt aatacaagcc aaaagaacaa
     5761 tttcagcaat agataaacct aaaaatttct taaatcaaaa aaatagaaag caaattaaag
     5821 caaccatcga agcagcaaac caacagggaa aacgtgcaga attttggttt aaatacggtg
     5881 ttcattcaca agttaagtca tatattgaat caaaaggcgg cattgttaaa acaggtttag
     5941 gagattaaac atggcatcat atgtttccat aaaaggatgg attgaatgct ctgacgatga
     6001 tataaaaatc atccaagaaa acattaataa tttttggaat aattgtccct ttaatatcga
     6061 agagaaagaa tctgcaaaaa tatataaaag cgggtgggtt ttcccgacaa atag
//
LOCUS       DAWXHA010000113         6096 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.113, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000113 DAWXHA010000000
VERSION     DAWXHA010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6096
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.113"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            312..731
                     /locus_tag="AABD07_001803"
     CDS             312..731
                     /locus_tag="AABD07_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356275.1"
                     /translation="MNETDLPKLLSVINRFTDIDKNWSCVLLFWIQRASGYLEMMTLD
                     DDENTATFLIEKLEKLLEPLPIDIDNTTFAEALADDFEILFLMAQYGSEYWNSLEESF
                     EEFCIRHTTLPNQLIADIPHAKKEKVTMWLKSLLKSS"
     gene            728..3280
                     /locus_tag="AABD07_001804"
     CDS             728..3280
                     /locus_tag="AABD07_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HFB2356276.1"
                     /translation="MKTSLLTIASSLMLVSGSMLYLINTRKSTDSVSHNDEVAHINQN
                     IVNDRFRILNAHELIQVLDLSPQISGIKMNLGLSDENWSKDALPFLEKYIAFVQRLPA
                     SESHHHAGDGGLVRHTLDVAALALVASTSQSWPPNAKTEEIAKKTAVWRYGIMCAALL
                     HDVGKTVTGFQVELFDSAISLEKLLWLPDTGSMAESGKLYYRVEFPDAKSAYSTHAEI
                     AWTFFQALVPSHVRQWLATTDPNLMITLRNYLSGKKDGSPLEQLIKNADMTSVSRDLR
                     SGSRQRFSTAKRKPFIETIMETLKEMLSDRGVHFSIATTAGGDLFRKGDRIYLMSKNV
                     PDYIRQYLRKNQHPAAGSFPADNQRIFDTLFEYRAVIPPENDPHRAINHIEVEFTRMD
                     GEKVRNIFSVLCFNAKTLYPDGDYPTEFLGNLSEVSAKKEIPDVVVSEDKVSTQIQGA
                     EDNPVTMTKDKMDFLSIQPVTAEQPPLPEKNQTETANSAFDNSMNTAAPAENKSSESE
                     KAKEPGYGTIDNLIENFNLIEADSEQTESTKSEAETAENAVNLVQENIRVEVKTETVD
                     KPRAEVKETETDKAPKTIKSGTKASRKKLAGLFADNRKPIGKTAEPDAQIKTTETVTH
                     QIDSEAVSLPESESAQNGMRELERLRLREPTSSPRPVQVMDDSEGLDSLASGVKNMAE
                     LEAIVSERNLKKQSETESTEIVKDSVKAKHMEARDRGMQFLRWLADGLGDGSIAVNRS
                     GATVHFIEQGMLLVTPAVFRDYAGGVFNKSDTESLGPLTQKGFEALRLHARTKKSSLH
                     RVLTTNGSNRRLFYCYLIPEHNIKHIIQPGSRPQNNTDIKLDESDLLVMEQK"
     gene            3277..5319
                     /gene="traD"
                     /locus_tag="AABD07_001805"
     CDS             3277..5319
                     /gene="traD"
                     /locus_tag="AABD07_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HFB2356277.1"
                     /translation="MSAHFPENVYRSPYEWISVAAYSTTAVSVAHLPVPPTIAYGSLA
                     IFSLVSVKRTLSALRIMRFRKNIRKLPYYALTADEIPSSDKALFLGKGFRWTQTHTQR
                     LFMVRQPENDGLRNPSKLYKAARKHEIETMGTDWISRITRKSAWWNPVAPLPPVGGSP
                     ELHGIEIEEDDIWEDLGERVGHKVVLGTTRVGKTRLCETMIVQDIRRGDVTIAFDPKG
                     DADLMTRMYVESQKSNRPFYMFHLGFPEYSCRYNPIGDYGRITEVATRIANQLPSEGQ
                     SAAFRDFVWRFVNVLTKTMEGLSIKPSYENIYKSAANVDELAGDYFKKILDKHHPGWE
                     KDFDNFDMPESEAKSAVKTGRNLDTMKLGSFLKAKKHNEPLIDALGGILSNDRSYFEK
                     LVSSLYPLLEKLTTGEVAKLISPDTEDLSDPRIIMDWRKVMESNAVVYIGLDSLSDAE
                     VAAAVGNAMFADLTSLAGQIYKFGHGVGQSGKTQKRKVSIHADEFNELIGDEFIPLLN
                     KAGGAGYQVTVYTQTWKDVEAKIGSPAKAGQIGGNLNTMIMLRVKTVETAEMLTNQLP
                     EVKIMTSTLVSRAGDVAFPDSHEDFSSGNEDRIGAETVPMLTPADLTQLPKGQAFALI
                     EGGQLYKIRLPLPKKDKQEEIPAHIGEMAADMREVYRLSRPSAEENAFTEGSSYAV"
     gene            5309..6004
                     /locus_tag="AABD07_001806"
     CDS             5309..6004
                     /locus_tag="AABD07_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4400 domain-containing protein"
                     /protein_id="HFB2356278.1"
                     /translation="MPSNTSAWYMNSLPLKFLFLPFKAAYTLFLIVLLIFGSSVLTQN
                     YFGTGNLLEDEIKWSESVGHDAFPGKEVGDTINLQIARLSYKGLKTVFFDLTLVNESL
                     KAKSEADFGYKFKNYLVPRMKYLQQFDTTLKVISLRLGNLALIVGISVIFAIPVLIDG
                     LVMRAIRQENASRESAGIYHRAKYWRTGIIWLGCMIYMCVPISIPPYLLYLPLVAAIW
                     MIFMQAKYLKKYL"
BASE COUNT         1874 a         1247 c         1347 g         1628 t
ORIGIN      
        1 tcttatccaa aagccaaaag gccgtctgct aaaaaaaatc gcagccggcc ttttttaaaa
       61 gctgtaacgg taaagcaaca gccttaatgg ttaaaggaag ggttcaaggg aaaaagggta
      121 aaagttaaag gtaaaacaaa ggcctgcatg taaaaatgca ggcctttgcc tattaaaagg
      181 ggcagcatta taccttataa atcttattct gtgacaattc taattaaaat aacatttttt
      241 attttgattt ttgacatggc aacttttttt tattatatga atggtttgac aaccctgtct
      301 ttttaatcaa aatgaatgaa acagatcttc ccaagcttct tagtgtcata aatcggttta
      361 cggatatcga taaaaactgg tcttgcgtgt tgttgttctg gatacagcgt gctagcggtt
      421 atctggaaat gatgacgctg gatgacgatg aaaatacggc aaccttcctt atcgaaaaac
      481 tagagaaact actagagcca ctgccgatag atattgataa cacgactttt gcagaagcac
      541 ttgccgatga ctttgaaatc ttatttctaa tggcccaata cggttctgaa tactggaatt
      601 cacttgaaga aagctttgag gaattttgta ttagacatac tacgctacct aatcaattga
      661 ttgctgatat tccacatgca aaaaaggaaa aagtcaccat gtggctaaaa tctttgctta
      721 aatcatcatg aaaacaagcc ttctcactat tgcatcctca ctaatgcttg tcagcggctc
      781 aatgctatac ctgataaata cgagaaaaag tacagattcc gtgtcacata atgatgaggt
      841 tgcccatatc aatcagaaca tagtaaatga ccggtttcgc attttaaacg cgcatgaact
      901 gattcaggtg ctcgacttaa gccctcaaat atccggtatt aagatgaact tagggttatc
      961 ggatgaaaac tggagtaagg atgcccttcc ctttttggaa aaatatatag cctttgttca
     1021 aaggcttccc gccagtgagt ctcatcacca tgcaggtgat ggtggtttag tccgccatac
     1081 actcgatgtg gctgcactgg ctcttgtggc atctacatcg caatcatggc ccccaaatgc
     1141 caaaaccgag gaaatagcga agaaaactgc cgtttggcgt tatggaatca tgtgtgccgc
     1201 cctgcttcac gacgttggta aaactgtgac gggatttcag gttgaactgt ttgattcggc
     1261 tatcagtctc gaaaaattat tatggttgcc tgatacaggc tccatggctg aaagtggcaa
     1321 gctttattat cgtgtcgaat ttcctgatgc aaagtctgct tacagtacac atgccgaaat
     1381 cgcctggaca ttctttcaag ctttggttcc ttcacatgtc agacaatggc ttgccacaac
     1441 ggatccgaat ttaatgatta ctttgagaaa ttatctgagt gggaaaaagg atggcagtcc
     1501 tcttgagcag ttaataaaaa atgcggatat gacctcagtt tcaagggatt tacgaagcgg
     1561 cagccgtcaa cgcttctcaa ccgccaagcg taaaccattc attgaaacca ttatggaaac
     1621 attgaaggag atgttatccg atagaggagt ccatttcagc atcgcaacaa ctgccggtgg
     1681 tgacctgttc cgtaagggtg atcgcatcta tttgatgtca aaaaacgtac ctgactacat
     1741 ccggcagtat ttgaggaaaa atcaacatcc tgctgcaggc tcatttccgg ctgacaacca
     1801 aaggatattt gacacattat tcgagtaccg tgccgtcatt ccgccggaaa acgatcctca
     1861 cagggcaatt aaccatatag aggttgagtt tacccgtatg gacggtgaaa aggtccgtaa
     1921 tatcttcagt gtactttgtt tcaatgccaa aaccctgtat ccggacggag attatccgac
     1981 tgagttctta ggtaatcttt cagaagtttc cgccaagaag gaaataccgg atgttgtagt
     2041 atcagaggat aaagtgtcaa ctcagataca aggtgccgaa gataacccag tcactatgac
     2101 caaggacaaa atggacttcc tgtctatcca accggtgaca gcagaacaac ctcccctacc
     2161 tgaaaaaaat caaactgaga cagctaactc ggcttttgac aacagtatga atactgctgc
     2221 tccagcggaa aataaatcta gcgagtcaga gaaagctaaa gaaccgggtt acggcacaat
     2281 tgataattta attgaaaact ttaacctgat agaagctgat tcagaacaaa cagaatcaac
     2341 caaatcagaa gccgagacag cagaaaatgc cgttaacctg gttcaagaaa atataagagt
     2401 agaagttaaa actgagacag tggacaaacc tcgcgctgaa gttaaagaaa ctgagacaga
     2461 taaagcacca aaaacaatta aatcaggaac caaagcaagc cgtaagaaac ttgccggcct
     2521 tttcgcagac aatcgtaaac ctattggaaa aacagccgaa cccgatgcac agattaaaac
     2581 aactgagaca gtaactcatc aaatagattc tgaagcagtt tcattgcctg aatctgaatc
     2641 agcacaaaac ggtatgcgtg aactggagcg gctaagacta agagaaccta catctagtcc
     2701 acgcccggtt caagtcatgg atgactccga aggtttagat agccttgcaa gcggggtaaa
     2761 aaatatggcc gaactcgaag ccatagtttc tgaacgtaat ttgaaaaagc aatcagaaac
     2821 agagtcgacc gaaatagtca aggattcagt caaagccaaa catatggagg ccagagaccg
     2881 tggaatgcag tttttacgat ggctggcaga tggattagga gacggcagca tagcagtcaa
     2941 tagaagtggt gcaacagtcc actttattga acaggggatg cttttggtta cgccagccgt
     3001 atttcgagat tacgccggcg gcgtgttcaa taaatctgat acggaaagtc taggccctct
     3061 tacacaaaaa ggctttgagg ctttgaggtt gcatgcaaga acgaaaaaaa gctcattgca
     3121 tagggttctg actacaaacg gtagcaatcg cagactcttc tattgctacc ttatccctga
     3181 acataatatc aaacatatca tacagccagg ttcaagacct cagaataata ccgatattaa
     3241 attagatgaa tccgacttat tagtaatgga acaaaaatga gtgcccactt ccctgaaaac
     3301 gtttatcgat caccctatga atggatcagt gtagccgcat actccaccac agcggtttca
     3361 gtagcacatt tgcccgtacc tccgacaatt gcttatggca gtttagctat tttttcgttg
     3421 gtttcagtca aacgcacgtt atcagcatta cgcattatgc gtttccgtaa aaatattcgg
     3481 aagttgccct attatgccct tactgccgat gaaattcctt cttctgataa agctcttttt
     3541 cttgggaaag gttttagatg gacacagaca catacccaac gtctttttat ggttcgccag
     3601 cctgagaacg acggacttcg taacccctca aaactctata aggcagcgcg aaaacatgag
     3661 attgagacaa tgggtacaga ctggatttcc cgcataactc ggaaatcggc atggtggaat
     3721 ccggttgctc ccttacctcc ggtcggaggt tctcctgaat tacatggcat tgaaattgag
     3781 gaagatgata tttgggaaga tttgggggag cgtgttggcc acaaggttgt attgggcaca
     3841 acccgcgttg gtaaaacccg attatgcgaa accatgattg ttcaggatat tcggaggggg
     3901 gatgttacga tcgcatttga tccaaagggt gacgctgacc tgatgactag aatgtatgtc
     3961 gaatcgcaaa aatcaaacag gccgttttat atgttccatt tgggtttccc cgagtacagt
     4021 tgccggtaca accctatcgg ggattatggc cgtattaccg aggtggcgac aaggattgca
     4081 aaccaactgc cttctgaagg tcagtctgct gctttccgag attttgtatg gcgtttcgtc
     4141 aacgttttaa cgaaaaccat ggaaggttta tccattaaac caagctatga aaatatctat
     4201 aagtctgctg caaatgtaga tgaacttgca ggggattact ttaaaaagat attagataaa
     4261 caccaccctg gttgggagaa agacttcgac aattttgata tgcccgagtc tgaagcaaaa
     4321 agcgcagtca aaactgggcg caacttggac acaatgaagc tcggttcttt cttgaaggcc
     4381 aaaaagcata acgaacctct tattgacgca ttgggtggta ttttgtccaa tgacagatcc
     4441 tattttgaga agctagtcag ctccctgtat ccattgctgg aaaaactgac gactggcgaa
     4501 gttgccaagc ttatcagccc ggatacagag gatttgtcag atccaagaat cattatggac
     4561 tggcgcaaag tcatggaatc gaatgccgtc gtctatattg gattggattc cctatctgat
     4621 gccgaagttg cagcagccgt tggtaatgcg atgtttgctg acttaacctc tcttgcgggt
     4681 cagatctata aattcggcca tggggttgga cagagtggaa aaacccagaa aagaaaagtc
     4741 tcaattcatg cagacgaatt caatgaatta atcggtgacg aattcattcc gttattgaat
     4801 aaggccggtg gtgccggcta ccaagtgacg gtttatacac aaacctggaa agacgtagaa
     4861 gccaaaattg gttcccctgc taaagcaggt caaattggcg gcaacttgaa tacgatgatt
     4921 atgcttaggg tgaaaactgt cgaaacagca gagatgctga cgaatcagtt gccggaagtc
     4981 aaaattatga ccagcactct agtctcaagg gctggtgatg ttgccttccc tgatagtcac
     5041 gaagatttta gcagtggaaa cgaagacagg attggtgctg agacagttcc tatgctgaca
     5101 cccgccgatt taacccaatt acccaaaggt caagcattcg cgcttattga aggtggccag
     5161 ctatataaaa ttcgactccc tctacccaaa aaggacaagc aggaggaaat ccctgcgcat
     5221 attggagaaa tggcggctga tatgcgcgaa gtttacagac taagccggcc ttcggctgaa
     5281 gaaaacgcat ttacggaggg aagtagttat gccgtctaat acaagcgcat ggtacatgaa
     5341 ttcattgcct ttaaagttct tatttctccc gtttaaagct gcttatacct tattcttaat
     5401 tgtgctgctt atctttggta gttcggtgtt gacacaaaac tattttggta ccggtaatct
     5461 attggaagat gaaatcaaat ggtctgagtc tgttggccat gatgcgtttc caggaaaaga
     5521 ggttggcgat actataaatc tgcaaattgc cagacttagt tacaaggggc tgaaaaccgt
     5581 attttttgac ctgacattag tcaatgaatc actgaaagcc aagtcagaag ccgattttgg
     5641 ttacaaattt aaaaattatt tagtcccccg tatgaaatat ctacagcaat tcgatactac
     5701 gttgaaggtt atttccttac gtttgggaaa tttggcatta atcgtgggta tctcagtaat
     5761 ctttgcaatt ccggttttga tagatggttt agtaatgaga gccattagac aggaaaatgc
     5821 ctcgcgagag agtgcaggca tttatcaccg tgcaaaatac tggagaacag ggattatttg
     5881 gttgggttgc atgatttata tgtgtgtgcc aatatcaata ccgccctact tgctctattt
     5941 acctctggta gcagcaattt ggatgatttt catgcaagct aaatatctta agaaatatct
     6001 ctaggcttcc agtagaatct aaatagtgct tttttagttc attaaacggg ggcttaatgc
     6061 tttaactgac ggtacagaaa tctcgaaaag catttt
//
LOCUS       DAWXHA010000114         5800 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.114, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000114 DAWXHA010000000
VERSION     DAWXHA010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5800
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.114"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(252..1102)
                     /locus_tag="AABD07_001807"
                     /pseudo
     CDS             complement(252..1102)
                     /locus_tag="AABD07_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752038.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
     gene            1452..2966
                     /locus_tag="AABD07_001808"
     CDS             1452..2966
                     /locus_tag="AABD07_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HFB2356279.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLTQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRSQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFDNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQAGLL"
     gene            3482..4047
                     /locus_tag="AABD07_001809"
                     /pseudo
     CDS             3482..4047
                     /locus_tag="AABD07_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
     gene            4269..5432
                     /locus_tag="AABD07_001810"
     CDS             4269..5432
                     /locus_tag="AABD07_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HFB2356280.1"
                     /translation="MSFKLRYLASVLALSSLLAACGGQEKSAAGDASPASETEAASQV
                     QASEAVPSASSASPEDQDLLKRAQGVFQPLPTVEEMQKIRPFTEEQVKLGHQLWYEPR
                     LSKGNTVSCNSCHNLASAGVDNMPTSQGHKGQFGGRNSPTALNAALLGSQFWDGRAAD
                     VEEQAGGPLVNPVEMANDSQEAAAAKIAKVPEYQEMFKKAFPEDGAVSFKNITTALGA
                     FERTLLTPTKWDEYLKGNVNALSEQERKGVRAFMDNGCIACHNGVNLGGTTFQKFGLV
                     QGPYWKFIEDPKRDKGRADVTKKTEDEFFFRVPGLRNVAKTYPYFHNGSVWELDKAVT
                     IMGKAQLGKDIPKEDVDNIVVFLNALSGNVSESARTMPELPLTAPMESKPDNK"
BASE COUNT         1382 a         1495 c         1546 g         1377 t
ORIGIN      
        1 ccaatcccgc caccaacctc accggctcaa accggcacag caacttatat cccgtcattc
       61 tcgcgcaggc gggaatccag ccccgccggt acagaaactt atcgaaaaaa agtttcttca
      121 gattttacgt tctagattcc cactttcgcg ggaatgacgg gatgcaggtt tccgcgcgga
      181 cggattcggc attcccgctt tcgcagaaat gtcggctttt ggtttgttgt ctttataaga
      241 ttattcggta attattctgc ggttttgcgt ttgtgtgctg ccggaatctc aagggattct
      301 ctgtatttgg caacggtgcg gcgggaaacc tctataccgc ggaaagccag caggttggcg
      361 agtgcctcgt cagaatagga cttgggcgtg gacgaggcaa aaccggcggc gggaaagggg
      421 ttgagcgaag caatgaggcc gagtgcggct tcgagtgtgc cgctgtcggt ttggggcagg
      481 cgttttttat tcgcgccggg gtttggctgc ggttgccgtc aatgctgtcg agggcgtttc
      541 ggacgatatg cagggcggcg ggtttggcag cacattcgcc cgatctttct atctgcaata
      601 tcaacgattc ggtcacatcg gcggcggcca tgcctgccgg atcgaatttt ttcaatgcgg
      661 tcagggcttg tttcagcatt gcttcatcca acatccactc caagggcgta tggtccagga
      721 tgtcttcgat gctgtcggtc aggtagccct gctcgtcaag gaaatcgata aggatgtgga
      781 cgcaggcggc ttcttggtcg gaaagggggt gttcgcacgc ttgcgcgtgc aggtattgct
      841 tgaaatcttc ttcgccggcg atgttggaca gcatatcttc gccttcgtct ccgccgattt
      901 gacgcgcggg cgcggtgtaa tggctgaatt cggcatcgga aaattcatcc gtttctttgc
      961 gttcgagcag ggggttgtcc gacggtcagt tttcgacctc gcgttcaagt tcgatacccg
     1021 gcatctgcaa tacgcgcaaa gattgttgca gccgctggtc gagctgctgg gtctgtttga
     1081 gctttattcc gattaaggta atgataatgc ggtgaaaatt gttattttca gcctgtcggc
     1141 gcaaaaaaat gccgcaaagc ggcattgcat tataaatggt tttaatgagc gggttcggat
     1201 tccgtccgat aacaaaaaac aaacgaaaat ggaaacttga ttgcttataa caatattaaa
     1261 tcaatttcat agttttaata acgaaaatct tggcgtataa tcgcatccat agtttttgca
     1321 aaaggaaaat aaaatgtcga ttcaagaaat ttattacaat caagaaaccg gttacgaata
     1381 cgctttccgc caaatcgtac tgtaagccgt ttgcccccca tttgaccaac ctgagaaaag
     1441 gaacaagagc gatgactacc tccaaatgcc ccgtaaccca tctgaccatg aacaacggcg
     1501 cgcccgttgc cgacaatcaa aacagcctga ccgccggccc gcgcggcccc ctgctgacgc
     1561 aagatttgtg gctgaatgaa aaactcgccg acttcgtgcg cgaagtcatc cccgaacgcc
     1621 gtatgcacgc caaaggttcg ggcgcgttcg gtacgtttac cgtaacacac gacatcacca
     1681 aatacacccg cgccaaaatt ttcagcgaag tcggcaaaaa aaccgagatg ttcgcccgtt
     1741 tcaccaccgt ggcaggcgag cgcggcgcag ccgatgcgga acgcgacatc cgcggttttg
     1801 cgttgaaatt ctataccgaa gaaggcaact gggatgtggt cggcaacaac acgcccgtgt
     1861 tcttcctgcg cgacccgcgc aaattccccg acctgaacaa agccgtcaaa cgcgatccgc
     1921 gcaccaatat gcgttccgcc acaaacaact gggacttctg gacgctgctg cccgaagccc
     1981 tgcaccaagt taccatcgtg atgagcgacc gcggtattcc cgccagctac cgccatatgc
     2041 acggcttcgg ttcgcatacc tacagcttct ggaacgaagc gggcgaacgt ttttgggtga
     2101 aattccattt ccgcagccag caagggatta aaaacctgac caacgaagaa gctgcaaaaa
     2161 tcatcgccga cgaccgcgaa agccatcagc gcgacctgta cgaagccatc gagcgcggcg
     2221 agttcccgaa atggacgatg tacatccaag tcatgcctga agccgatgcc gaaaaagtgc
     2281 cttatcatcc gtttgacttg accaaagttt ggccgaaaaa agactatccg ctgattgaag
     2341 tgggcgaatt cgagttgaac cgcaatcccg aaaacttctt cgccgatgtg gaacaatccg
     2401 ccttcgcacc gagcaacctc gttcccggta tcggcgcgag cccggataaa atgttgcaag
     2461 cccgtttgtt caattacgcc gacgcgcaac gttaccgctt gggtgtgaac ttccgccaaa
     2521 tccccgtcaa tcgtccgcgt tgccctgttc acagcaacca gcgcgacgga caaggccgcg
     2581 ccgacggcaa ctacggcagc ctgccgcact acgaacccaa cagcttcggc caatggcagc
     2641 aacaacccga cttcgccgaa ccgcctttga aaatcaacgg cgacgcggca cactgggact
     2701 accgccaaga cgatgacgac tacttcagcc aaccgcgcgc cttgttcaac ctgatgaacg
     2761 acgcgcagaa acaggctttg tttgacaaca ccgccgcagc catgggcgat gcgcccgact
     2821 tcatcaaata ccgccatatc cgcaactgct accgttgcga cccggcatac ggtgaaggcg
     2881 tagccaaagc cctcggactg accgtcgaag acgcacaagc cgcccgcgcg accgatcccg
     2941 cactgggtca ggccggtttg ctgtaagggg gcattatgtg gatggaaatt gaagaaatcc
     3001 tgtcccgcgc cgtccgatac cggaaataac cgggcataaa aatgccgtct gaaacgtcgt
     3061 ttgaccgttt cagacggcat ttccacacct cgccccgccg tttcagtggg cgttttttat
     3121 tatagtggat taaatttaaa ccggtacggc gttgcctcgc cttgtcctga tttttgttaa
     3181 tccactataa acgcaaaata tcccgtcatt cccgcaccat ccccaccggt tcaaaccggc
     3241 acgaaaactt ttccgcgtca ttcccgcgaa agtgggaatc cggaacgtaa aatctaaaga
     3301 aaccgtttta tccgataagt ttccgtgccg acggggctgg attcccactt tcgtgggaat
     3361 gacgggattt ctgtttttga ttttttgttt ttgcgggaat aacgggatgc gggttttcgt
     3421 gcggcgtttt tcgcgctttg ctgttttgtt ataatccgcc ctttttaagg atgggtgcgg
     3481 tatgagtctt tacgctttgc tcttggttgc gctgggaatg tcgatggatg cgtttgccgt
     3541 cgcgctggca aagggtgcgg cggtcaggat gccccgcgca aaattgcagc aacggctttg
     3601 gtgttcggta cggttgaagc gttcatgccg ctggcgggct gggtaggcgg tttttatgcc
     3661 aagccgttta tcagcgaatg agaccattgg gtggcttttg tcctgttggg cggactgggt
     3721 ctgaaaatga tgcgcgaagg gttgtccggc gaggcggaag atgtgcgcga aagcaaacag
     3781 gaaagcctat ggatgacggt tttgactgct tttggaacca gtattgattc catgatcgtc
     3841 ggggtgggct tggcgtttat ggaggtaaac atcgcctttg ccgccgccgt aatcggtatg
     3901 gcggctacgg taatggttac catcgggctg acggcgggaa aggcttttgg cgtattgttc
     3961 ggcaggcgtg cggaatttgc cggaggtttg gtgttgattg ccatcggtac atggacgctc
     4021 ttatcgcatt tgggtttgat tcaatgatgt cggaaaataa aatgccgtct gaagctttac
     4081 cggtttcaga cggcattttg ttaaacttga ttctctatcg gtattattgt gtaaagctat
     4141 tgaaaataaa atattgattt tccgcaaaga tggctaaagg tgcgataggt acactgaaga
     4201 aataatcggc agaacaggtt tgcctgccgg tttgaacaat gattttaacc tcccataagg
     4261 aatacacgat gtctttcaaa ctccgttacc tcgcatcagt attggcattg tcttcactgt
     4321 tggcggcatg cggcggtcag gaaaagtctg cggcaggcga tgcttctcct gcttccgaga
     4381 ccgaagcggc ttcccaagta caggcctcgg aagccgttcc ttccgcttca tcggcctcgc
     4441 ccgaagacca agaccttttg aaacgcgcgc aaggtgtatt ccaacctttg ccgactgtcg
     4501 aagaaatgca gaaaatccgt ccgtttaccg aagaacaggt caaactcgga caccaactct
     4561 ggtatgaacc acgcctttcc aaaggcaata ccgtaagctg caactcttgc cacaaccttg
     4621 cttccgccgg tgtggacaat atgccgacca gtcaggggca caaagggcag ttcggcggac
     4681 gcaactcgcc taccgcattg aatgctgcgc tgctgggcag ccagttttgg gacggacgtg
     4741 ccgccgatgt tgaagaacag gctggcgggc ctttggtgaa tccggtggaa atggcgaatg
     4801 attcgcaaga ggcggctgca gccaaaatcg ccaaagttcc cgaatatcaa gaaatgttta
     4861 aaaaagcttt tcctgaagac ggcgcggttt cgtttaaaaa catcactacc gcattgggtg
     4921 cgtttgagcg taccctgctg acgccgacca aatgggacga atacctcaaa ggcaacgtca
     4981 acgccctgag cgaacaggaa cgaaaaggcg tgcgcgcgtt catggacaac ggctgtattg
     5041 cctgccacaa cggtgtcaac cttggaggca cgaccttcca gaaattcggt ctggtccaag
     5101 ggccgtattg gaaattcatt gaagatccga aacgcgacaa aggccgtgct gacgtaacca
     5161 aaaaaaccga agacgaattt ttcttccgtg ttccggggtt gcgtaacgtg gctaaaactt
     5221 atccgtattt ccacaacggc agcgtgtggg agctggataa ggcagttacc atcatgggta
     5281 aggcgcaatt gggtaaagac attccgaaag aagatgtgga taacatcgtc gtattcctga
     5341 atgcactttc cggcaatgtt tccgaatcag cgcgcacgat gccggaactg cccctgaccg
     5401 caccgatgga atctaagccg gacaacaaat aatccggccg gtacgcaaaa atgccgtctg
     5461 aaacgggaat ctgtttcaga cggcatttta tatttcgtcg cgtcagatac gcagggtatg
     5521 ccgtagggtg tgcttcagcc agccgtttcc accaattcaa ccaaccatgt ccgggtctta
     5581 tgcgtttttc acgaatgcgc ggcgtaggcg gagggattgg tgggctgaag cctaattcaa
     5641 tggctgcgtt gtgtaagcca tgatgcgttt ggataattaa tcaatattct tgcgctacca
     5701 ttaccatcgg ctttgggggt ttgtacttcg gcattatgat aatcaatagc ctgtttggat
     5761 tgtattcccg aatccgacag ttttagatta taaaaaggcc
//
LOCUS       DAWXHA010000115         5769 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.115, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000115 DAWXHA010000000
VERSION     DAWXHA010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5769
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.115"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(93..1340)
                     /locus_tag="AABD07_001811"
     CDS             complement(93..1340)
                     /locus_tag="AABD07_001811"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HFB2356281.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPEAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYTLDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRAAQEQESMGAKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKNPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
     gene            complement(1493..1894)
                     /gene="gcvH"
                     /locus_tag="AABD07_001812"
     CDS             complement(1493..1894)
                     /gene="gcvH"
                     /locus_tag="AABD07_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HFB2356282.1"
                     /translation="MENQTMSNNIPTELKYVASHEWLRLEEDGIITVGITHHAQELLG
                     DIVFVELPEVGANLAAEEQSGVVESVKAASDVYAPIAGEVVAVNDDLPGAPETANSDP
                     YGAGWFFKIKPANPADYDGLLTAEQYAGEVD"
     gene            complement(1931..2470)
                     /locus_tag="AABD07_001813"
     CDS             complement(1931..2470)
                     /locus_tag="AABD07_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356283.1"
                     /translation="MFFDTEGKSHTAIFMKIVGGNGKIAGEVVIDGEYALDIVRMNDD
                     LSIAVQDNKGRSRASDLEALSQAKSFTLIAFSRYAGTVEVDKVSAVTGICADYRSKGL
                     KVAVADNMRPKQEIVVFRASGVMASNKRKINEAYLDYSASSKLPSAQKQELEQDKNNM
                     IAVHYGRLEELIARGICVR"
     gene            complement(2617..3717)
                     /gene="gcvT"
                     /locus_tag="AABD07_001814"
     CDS             complement(2617..3717)
                     /gene="gcvT"
                     /locus_tag="AABD07_001814"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HFB2356284.1"
                     /translation="MTALKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVVGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPDTEAVAFFKVLQTA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGRTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEADVRVLKLPFVRSGQKQFD"
     gene            3688..3906
                     /locus_tag="AABD07_001815"
     CDS             3688..3906
                     /locus_tag="AABD07_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA delta(2)-isopentenylpyrophosphate
                     transferase"
                     /protein_id="HFB2356285.1"
                     /translation="MKRGGFQSSHSQVSPDFLFRCRPRTCARMTLSVLEPEIFDRIRM
                     MANQSAHCFARLSEWWFRRPSPLRWTLF"
     regulatory      complement(3928..4024)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            4227..4709
                     /locus_tag="AABD07_001816"
     CDS             4227..4709
                     /locus_tag="AABD07_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HFB2356286.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     gene            4765..5361
                     /locus_tag="AABD07_001817"
     CDS             4765..5361
                     /locus_tag="AABD07_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HFB2356287.1"
                     /translation="MNIDTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNLVRI
                     AISEAKHLDGFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIADAAV
                     VENGLEGIVQIAPFHPYFQFEGTDSDGIGNYTNRSPYPTLHLIREDSIAKAAQAFPDA
                     SAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            5358..5717
                     /locus_tag="AABD07_001818"
     CDS             5358..5717
                     /locus_tag="AABD07_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 domain-containing protein"
                     /protein_id="HFB2356288.1"
                     /translation="MIRYLLIACGGISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLMMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
BASE COUNT         1301 a         1601 c         1415 g         1452 t
ORIGIN      
        1 tcgatataat gtgggatttc acgatgttgt caggcggcac aaaaatatgc cgtctgaaac
       61 cccttcagac ggcatccttt tccggcgcac cgttatttgt ccaaatgata aatctgcgcg
      121 acggcatgaa ccaaatcttt atcttcttcc cccgccttat tcaaggtttg agttggcgaa
      181 tgcagcagct tgttggtcag ttggacggac agccgttcca aaacctcttc cgccgttgca
      241 cctttggcaa gctgtttcat cgcattttcc aacacctgct tgcgcgcttt ctcgccctcg
      301 tcccgcaagg ccttaatcag cggaacgctc tgcctgccct gctgctgcct gacaaattcg
      361 gcaacctttt cggacaccag cgtttcggcg gcggcggcgg ccttctgcct tgcctccttg
      421 ccgctttgga cgatgttgac catatcgtcc accgtataaa gatacgcatc gttcaaatcg
      481 ccgacttccg cttcaatatc gcgcggcacg gccaagtcaa gcatgaacaa cggcatactc
      541 tgacgctgtt tcaatgcgcg ttcgaccatg cctttgccga ctatcggaag ctggctcgcc
      601 gttgaagaaa ccaccacgtc gtaatcgtgc agaatggcag gcagatcgga cagcaggcac
      661 ggttccgcgt taacaccgag cttgtcgcac aactcctgtg cacgcgccag cgtccggttg
      721 gcaaccgtca tcagccgggg atttttggcg gcaaaataag tggcaaccag ctcaatcatt
      781 tcgcctgcgc cgataaacaa tacgttcaaa tcgccgatgt cgggaaaaat ctgttccgcc
      841 aacttgacgg acgcggaagc catcgaaacc gaattttcgc cgacagcggt atcggtacgg
      901 acttctttag caacggaaaa ggttttttgg aacagggcat tgagttttgc ccccatactt
      961 tcctgttctt gagccgcacg caccgcatct ttaatctgcc ccaaaatctg cggctcgccc
     1021 aaaaccatcg aatccaagcc gcaggcaacg cggaaggcgt ggcgcacggt ttcctgcata
     1081 tccagcgtgt acagatacgg acggatttct tcaatcggca aactgtggta atcggcaagc
     1141 catcggatga tttcttccga atcgccgacg cagtaaagct cggtgcggtt gcaggtagaa
     1201 aggattaccg cctccgttgc cgcattgctt cgggcaagat tgcggacggc ttctggcagg
     1261 gcggcggcgg caaacgccag cttttcccgt atgcttaaag gtgcggtttg atgattgagt
     1321 ccgacagcgg taagttgcat gaaaaaatcg gtgaagatgg atatagaccg ttattatagc
     1381 ctaactgcat ccttaaaaca cggacaaaaa aactgcacct ccgaccgcag aaatgccgtc
     1441 tgaaggtgca gtttccgttt gtccgacggt tgccgtcgga caaacgggcg gtttaatcca
     1501 cttcgcccgc gtattgttcg gcagtcagca gaccgtcgta atcggcagga ttggcaggtt
     1561 tgattttgaa gaaccagcct gcgccgtaag ggtcgctgtt ggcggtttcc ggcgcgcctg
     1621 gcaagtcatc gttgacggca acgacttcgc ccgcaatcgg cgcatacacg tcggatgcgg
     1681 cttttacaga ctcaaccaca ccggactgtt cttcggcggc gaggttcgca ccgacttcgg
     1741 gcagctcgac aaacacgatg tcgcccaaca gctcttgcgc gtgatgggta ataccgacgg
     1801 taatgatacc gtcttcttca aggcgcagcc attcatggct ggcaacgtat ttcagttctg
     1861 ttgggatgtt gttgctcatg gtttgattct ccattggtag ggggttattt tcagacggca
     1921 tctgcacaac ttagcgtacg cagatacctc gtgcgattaa ttcttccaag cgtccgtaat
     1981 ggacggcaat catattgttt ttatcttgtt ccaattcttg cttttgggcg gaaggcagtt
     2041 tagaggatgc agaataatcc aaatatgctt cgtttatctt gcgcttatta cttgccatta
     2101 cgccgcttgc acggaataca acgatttctt gtttgggcct catattgtct gcaacggcaa
     2161 ccttcaggcc tttgctgcgg taatctgcac aaatgcctgt aacagccgat actttatcca
     2221 cttcaactgt gcccgcataa cggctgaacg caattagggt aaatgatttc gcttgcgaca
     2281 atgcttccag gtcggaagca cggcttctac ccttattatc ttgcacggca atactcaaat
     2341 catcattcat gcggacaata tcaagagcat attccccgtc tatcaccacc tcgccggcaa
     2401 tctttccatt gccgccaacg attttcataa atattgcagt atgggatttt ccttctgtat
     2461 cgaaaaacat caatccgcgc tcgccggcga cgaagcgcaa gccgataaca tcaataacaa
     2521 caataaactg ccaaaatttg ctttcatagg aaataacaat tccttaaaac ctgctttcag
     2581 acggcttaat tcaaacaaat gccgtctgaa ccgatattaa tcaaactgtt tttgaccgct
     2641 gcggacgaac ggcagcttca gtacgcgcac gtccgcttct ttgccgcgaa tcaggacttt
     2701 ggcggtatcg ccgtcaaaat ctttcggtac gcgggcgatg gcgatagatt gtttcaggct
     2761 gggcgagaat acgccgctgg tggtttcgcc ttttcctttg tcggtcaaca cttccatatg
     2821 cgcgcgcagg atgccgcctt tttcgagcag caaaccgact tgtttgacgg caacgccttt
     2881 ttctttcaat gccaacaagg cggctttacc gacaaaatcg cggctttcgt ctttcaaatc
     2941 aaccgtccgg cccatgcctg cttcgagcgg gctggtgtcg tcgtccatat cgttgccgta
     3001 gaggttcata ccggcttcca tgcgcagggt gtcgcgcgcg ccgaggccgc aaggctgtac
     3061 gcctgctgtt tgcaggactt tgaagaatgc gacggcttcg gtatccggca gaatcacttc
     3121 gacgccgtct tcgccggtgt agcctgtacg ggcgacaaac cagtcgttgc ccaaatccgc
     3181 gccttggaac ggtttgaggc cgtgaatcac atccgcccat tcgggtttga cggtcaggag
     3241 tttttcaatg gctttaggac cttgtacggc aagcataccg aggtcgtagc gcggattgaa
     3301 ggcaacgccg aactcttgtc cgactttgtg gaattgtgcc gtgtcttttt cacgggtcgc
     3361 accgttggac acgatgcggt attgggtttc ggcctcgttg gtgcggtaaa cgatcaagtc
     3421 gtcaatcacg ccgccgttgt cgttgagcaa agcggaataa agggctttgc cgacaaaagc
     3481 gagtttggca acgtcgttgg caatcaattt gcggaaaaag gctttggcgt tcgctccgac
     3541 gacgtcggta acgagcatat gggatacgtc aaacataccg gcgtcggtgc gcacggcttc
     3601 gtgttcggcg atttgcgaac cataatggat gggcagttcc cagccggcaa aatctaccgg
     3661 cttcgcgcct gcatcttgat gggcttgatg aaacggggtg gttttcagag cagtcattct
     3721 caagtttctc cggatttttt gttcagatgc cgcccgcgca cctgtgcgcg gatgacccta
     3781 tctgtccttg aacctgagat tttcgaccgt atccgcatga tggcaaacca gtctgctcac
     3841 tgctttgcgc ggttgtctga atggtggttc agacggcctt ctccccttcg gtggacgtta
     3901 ttctaacgcc gctctccaga ttgtttgttt caatgtgcag tccctgatac ctgagcgatt
     3961 taagggtgtc tgcgccttcg gcggctacgc gtaatcgggt gtagctctct cctgcacatt
     4021 tcccgattat gtcttgaatc ggcggtttgg gcaagccgtc ttaaagagat gcaaaccgac
     4081 cgcctctgtt ttcacatgat tttccgaaaa caaaatttgt cccggatgac ggtataactt
     4141 tttatatgtt aatatggtct ccatctatgc ggattgccgc aaacatacgg acagacaatc
     4201 cgaattcctt aaaacggaac gcaaatatgc cccaactcac tttagacaaa accgatatta
     4261 aaatcttaca ggtcctccag gaaaacggca ggctgaccaa tgtcgaactg tccgaacgtg
     4321 tcgcactttc gccttctccg tgcctgcgcc gtctgaagca gttggaagat gccggcatcg
     4381 tccgccaata tgccgcgctg ctgtctccgg aatccgtcaa cttaggtctt caggcattta
     4441 tccgcgtttc catccgcaaa gcaaaagacg cgcgggaaga ttttgccgca tcggttcgaa
     4501 aatggccgga agtcttgagc tgcttcgccc taaccggcga gaccgactac ctgcttcagg
     4561 cattttttac cgatatgaac gcgttttccc attttgtttt ggatacgctt ttatcccacc
     4621 acggcgtaca ggatgcgcaa tcgagctttg ttttaaaaga aatcaaacac accacctccc
     4681 tgccgctcaa ccacctgctg aaggaatagt gcccttcccg attttcccgc acgtgcactc
     4741 tgcaaacaca tttacatgac aataatgaat atcgatactt ccgaaaataa agatgctgtt
     4801 gccgaacaca ccggacaatg gttggaaaaa gccgtcatcg gtctgaacct gtgtcccttt
     4861 gccaaagccc cccacgttaa aaaccttgtc cgcatcgcga tcagcgaagc caaacacctt
     4921 gacggttttt tggaagactt ggacgaagaa ctgcagcgac tgggcaatac acccgccacc
     4981 gaactggaaa ccaccctgct ggttcacccg accctattcc ccgatttcga cgtattcaac
     5041 gatatgctcg acattgccga tgccgccgtt gtcgaaaacg gcttggaagg catcgtccaa
     5101 atcgccccgt ttcatcccta tttccaattt gaaggcacgg attcagacgg catcggcaac
     5161 tacaccaacc gttctcccta tccgacgctg cacctcatcc gcgaagacag cattgccaaa
     5221 gccgcacaag cctttcccga cgcttcggca atattcgaac gcaatatcgc cctgctggaa
     5281 aaaatgggac atgaaggctg ggcaaaactc ggtatcacat cctgccctta tccgcacaat
     5341 aagaaaaata tttcaaaatg atccgttatc ttttaattgc ctgcggcggc atctccctgc
     5401 tgctggggat catcggcatt tttttgccgc tgttgccgac cacgccgttc gtactactct
     5461 ccgccgcctg ctgggcaaag gcatccccgc gctttcaccg ctggctgcac cggcaccgct
     5521 atttcggccc gatggttcat aactgggaac aaaacggcgc agtgccgcgc aaagccaaga
     5581 ttttcgccat cagcatgatg accgcatcct gcctgatgat gttttggcag tttccccaac
     5641 gctggtgggt cggggcggtt tcatcggttt tttgttccct tgtcgccata tggatgtggc
     5701 gcagacccga atcttgaatg ccgtctgaaa gggataaggg caaacaaacg ggtggggcaa
     5761 acctgtttc
//
LOCUS       DAWXHA010000116         5585 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.116, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000116 DAWXHA010000000
VERSION     DAWXHA010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5585
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.116"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            593..3637
                     /locus_tag="AABD07_001819"
     CDS             593..3637
                     /locus_tag="AABD07_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HFB2356289.1"
                     /translation="MSDLEAKVRITVENHTKQGFDSAAADADKAAEKMRSSGDNAAKG
                     FKAAIDSMHETMRNLHADVKAGFEAAGNQAQQASEKVRAEVGKIGSGLSGLTKLLAGL
                     ATADFAKSVLDTADAMQSINSQVRQVTSSETEYLAVQQQLLDTANRTCASLELTANLY
                     VSTSRALKDYGYTQQEILKFTEATNNAMTIGGVGARQQAAALFQLSQALGSGVLQGDE
                     FKSISEAAPILLDTIAEYMGKSRAEIKKLGSEGKLTADVIFKAISGASEKFGEQAAKM
                     PVTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAVAVA
                     AAVAPTLALNLALLANPFGIIAVAIGTVVGLIAKFGDEIDVFGGGWSNLSDVIRAVWQ
                     IITETVGEAVGTVKSWFDGLTGRLNEGAGGWPSLFGRVMSVISSAIGAYVNVYINIFA
                     TGWMLIKEAANDMPQFFANLGKAIGNVFISAIERMINKAVGMINSMIDFANKAASMAG
                     ISGIGKLNKVRMGRMDDGGLGERIHDSLTKDRAGAMANAVRERAADIHEADALKGRGG
                     GGHAKTARKKPGANQGGGKGGKSRSGGPGAAKDPMQAWEGEIKARKLAHREMQRETLT
                     HQEWDLAREAEYWRAKLATVDANGKTGVKIREKILTLEDQLSKQSTEAKMNQAAEWEK
                     LDKHKLEMEKDAADQALADGRISQLERLDLEIEFENRRYQIAYDALQERIALAEQDPA
                     YSQAAIGKLKAQMGELGRGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGRNVWQEAQ
                     QQMGQAFTAMLARAQNFRQAMNGFFKSMGQTFIQEMVTKPLTGLMRRMVEESAIYKMI
                     FGTKETLETAAAAKTAATKATETTAVVSSNAVQAASGAAASQAHIPYVGPILAVAAMA
                     AMMSAVMGLMGGGGSQTTTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHAQTI
                     REMADQQGGGSTVIINSTGGDFIHKNDLAKLLKQMKRDFKFV"
     gene            complement(3697..4176)
                     /locus_tag="AABD07_001820"
     CDS             complement(3697..4176)
                     /locus_tag="AABD07_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HFB2356290.1"
                     /translation="MTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAE
                     RNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGG
                     ALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK"
     gene            complement(4518..5507)
                     /locus_tag="AABD07_001821"
     CDS             complement(4518..5507)
                     /locus_tag="AABD07_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HFB2356291.1"
                     /translation="MATITQRNGKWRVQIRMKGVSRSATFERASDAKAWAARIESQIM
                     DGIQGNAPRNTIFADLIRRYLSEVTPSKRGAREESYRIGRALKTPLAKVRLADLRPQD
                     FADWRDQRLQEVSPTSVGRELTTLSAVCEHAMKEWGLLRENPVRKISKPKKSRARTRR
                     PTEQEIADICAALLYRPNEKPKMAVQRVAVAVLFAIETAMRAGEICGLKWADVNMRRR
                     IAHLPITKNGDSRDVPLSLRAAELIEQLRGIDDTWVFSLDAKSLDVLFRRARDNCGIQ
                     GLHFHDTRREALTRLSKKVPVEVLAKISGHRDLRILLNVYYRPDMADIAKMLD"
BASE COUNT         1358 a         1383 c         1615 g         1229 t
ORIGIN      
        1 ctgaaggcgg ccggtatgta taacgactgc agggcgcggc acggcgcgct ggtacgggcg
       61 ttgggcgcgg attgagttgt caaccggaag tttgcaaccg aaccgtcggt tcggggttgg
      121 cggccgcatc gggggaagtg tcggcattcc ccccgatttt ttacatatcg ggcggacgcg
      181 gcaaattttt gccgttttgt ttgcgcgaag ggggcgttat acaaaattat taagcgcacc
      241 aataatgggc ggaaatgaaa atgccgtacc gatccggaca acaaccgatg ccgcaccctg
      301 cgggcaggct tcgcactctg aaaggttcag gcggcatttg tattccctgc gcgtcaaacc
      361 gccttcgtgt aaagcggttg caaaaaagcc ttttattttg acagggtgca gagatgaacg
      421 ccgaaggatt ttgtgaaaaa caaaccgcct gccggccgga cgggcgccga aatgcgggcg
      481 atcgtgccga tttgaaggcc tttgagtttg ccggacggga attggcgaat tatcgggaaa
      541 tgttgaaacg ttatgccgtc tgaaaagacg gcttttttat ttggggctgt aaatgagcga
      601 tttggaagcc aaagtcagga taacggtaga aaaccatacg aagcagggtt ttgattcggc
      661 cgccgccgat gctgataagg cggcggaaaa gatgcgcagc agcggcgata atgccgcaaa
      721 gggctttaaa gctgcaatcg acagtatgca cgagaccatg cgcaatttgc acgccgatgt
      781 gaaagcggga tttgaagcgg cgggcaatca ggcgcaacag gcgtctgaaa aggttagggc
      841 cgaagtgggt aaaatcggct caggcttatc ggggctgacc aaactgctgg caggattagc
      901 aaccgcagac ttcgccaaat cggtgcttga taccgccgat gcgatgcagt cgataaacag
      961 ccaagtccga caagtcacgt cgtctgaaac ggagtatctg gccgtgcagc agcagcttct
     1021 cgatacggca aaccgtacct gtgcatcgct tgaattaacg gcaaacctgt acgtttccac
     1081 aagccgcgcg ttgaaagact acggctacac gcagcaggaa attttaaaat tcaccgaggc
     1141 aaccaacaac gcgatgacca tcggcggcgt tggcgcgcga caacaggccg ccgcgctgtt
     1201 ccagttatcg caggctttgg gcagcggcgt attgcagggc gatgaattta aatccatttc
     1261 cgaagccgca cctattttgc tggataccat tgcggaatat atgggcaaat cccgcgctga
     1321 aatcaaaaag ctgggcagcg aagggaaatt gacggcggat gtgattttca aagccatttc
     1381 cggcgcgtcg gagaagttcg gggagcaggc ggccaaaatg cccgtgacga tggggcaggc
     1441 tttgacggtg ttctcgaaca actggcaaag catggtttca aaactgctga acgacagcgg
     1501 cacaatgtcg gggattgccg ccgttattaa actgattgcc gataacctga atttggtcgt
     1561 ccctatcgtc gcaggttttg ccgttgccgt tgccgccgcc gttgcaccga cactggcttt
     1621 gaatcttgca ctgctggcaa acccgttcgg gattattgcc gtcgcaatcg gcacggttgt
     1681 cgggctgatt gcgaaattcg gcgatgaaat cgatgttttc ggcggcggct ggtcgaatct
     1741 ttccgatgtg attcgggcgg tttggcaaat catcacggaa accgtcgggg aagcggtggg
     1801 aaccgtcaaa tcgtggtttg acgggctgac aggccggctg aacgagggcg cgggcggctg
     1861 gccgtcgttg ttcgggcgcg tgatgagcgt catctcaagc gcaatcggcg cgtatgtgaa
     1921 cgtttatatc aacatattcg caaccggctg gatgctgatt aaagaagccg caaacgatat
     1981 gccgcaattc ttcgccaatc tcggcaaggc cataggcaac gtgtttattt ccgcgatcga
     2041 acggatgata aacaaagcgg taggcatgat taacagcatg attgactttg ccaacaaagc
     2101 cgcgtcgatg gccgggatat cgggcattgg aaagctgaac aaggttcgga tggggcggat
     2161 ggacgacggc gggcttggcg agcgtattca tgacagcttg acgaaagacc gcgccggcgc
     2221 aatggcaaat gccgtccgcg aacgggccgc cgatattcac gaagccgatg ccctcaaggg
     2281 acgcggcggc ggaggacacg ccaaaaccgc ccggaaaaag ccgggcgcaa atcagggcgg
     2341 cggcaaaggg ggcaaatccc gttcgggcgg tccgggcgcg gccaaagacc cgatgcaggc
     2401 ttgggaaggg gaaatcaaag cccgaaaact cgcacaccgc gaaatgcagc gcgaaacgct
     2461 cacgcaccaa gaatgggatt tggcgcgtga ggcggaatat tggcgggcga agctggcaac
     2521 ggtggacgcc aacggaaaaa caggcgtaaa aatccgcgaa aaaatcctga cgcttgaaga
     2581 ccaattatcg aagcagtcaa ccgaagccaa aatgaatcag gcggccgaat gggagaaatt
     2641 ggacaagcac aagctggaga tggagaaaga cgcggcagac caagccctgg cagacggacg
     2701 tatttcgcaa ctcgaacgcc tggacttgga aatcgagttt gaaaaccgcc gttaccaaat
     2761 cgcctatgac gcattgcagg aacgcatcgc acttgccgaa caagacccgg catacagtca
     2821 ggcggcaatc ggcaagctca aggcccaaat gggcgaattg gggcgggggc acgaacggac
     2881 gcaggcgaag aacgagggca aacgcgaaaa ccaacgccgc aaagacgcgc ccaacgtcat
     2941 ggaaatgctg caagacggcg gcaggaacgt ttggcaggaa gcacagcagc agatggggca
     3001 ggcgttcacc gccatgctgg cgagggcgca gaacttcagg caggcgatga acggtttctt
     3061 caaaagtatg gggcaaacct ttattcagga aatggttacg aaacctttga cgggcttgat
     3121 gcggcgcatg gttgaggaat cggccattta caagatgatt ttcggaacta aggaaacgct
     3181 ggagacagcg gcggcagcca agacggcggc aactaaggca accgagacaa cggcggttgt
     3241 cagtagtaat gctgttcaag cggcttcagg cgcggcggct tcccaggcgc atatcccata
     3301 tgtcggcccg attcttgccg ttgcggctat ggcggcgatg atgtcggctg taatgggact
     3361 gatgggcggc ggcggttctc aaacgaccac aaccacgacg cgcattccct cggcggcagg
     3421 cggctgggac atcccggcag gcatcaaccc gctgacccaa ctgcacgaaa acgagatggt
     3481 cttacccgca gaacacgcgc aaaccatccg tgaaatggcg gatcagcagg gaggcggcag
     3541 caccgtcatc atcaattcga caggcggcga cttcatccat aaaaacgatt tggcgaagct
     3601 cttgaagcag atgaaacggg actttaaatt tgtctgagaa aatgccgtcc gaaaggttcg
     3661 gacggcctat gttgcggcgt acgtcaagct attaagctat ttggttttca gaggcttttt
     3721 cttccatttc cgggctacgg cttcaaattc ttgaaaggcc gtcggcgcgc tcctgatacg
     3781 gcgtatttca aaaatgaagc tgcttaggtt gtcccagtcg cgtaacagca tggagtattc
     3841 gaaatcttta tacattttct cgtgcagcgc cccgcccaat acgcccgcac agacaaattc
     3901 gcgctggttt aaaactgtca gtatggcttc acggtctttc ttcttgtccg gggtatctga
     3961 tgtataggtg gcgagtatgc atccgtctgt ttttgccagc ccgtttacta tggttatggc
     4021 ttcttgaagg gcggcattgt tacgttcggc catgatcatg tcgatggtgg cgcgcttttt
     4081 ggcgttttcc gtattcctca tgatgccgta agcggcaaca aaaacgccga taacagtcaa
     4141 tatcggcgtt gctatctgta ttaggttgtc agtcattgcc gtcccagccg tccgaaaggc
     4201 ggaaatcacg gctttccgaa taaatatgcc ccattgtcat ccccttaagc tgatgttgag
     4261 aataaatcct tgcgtcggaa tatacggcat tgcctgacta ttttcaagat tccgcacccc
     4321 gcggaccgga ctatacaaaa aaaccgcctt cgtgtaaagc ggttgaagag agcctttcaa
     4381 taaaaatgcc gtccgaaggg ctttcggacg gcatttttta tagattcttt tttaatgaac
     4441 ctttgaaacc gaagataatt aattttcctc tttattttca atacgcagtg tgccctatgt
     4501 ttttaaataa aaatatttta atccaacatt tttgcaatat ccgccatgtc ggggcggtag
     4561 taaacattga gtaaaatcct taaatcccga tgcccgctga tttttgccaa gacctccaca
     4621 ggcacttttt ttgataggcg cgtgagggct tcgcggcggg tgtcgtgaaa atgcaggcct
     4681 tgtatgccgc aattatcccg cgctcgcctg aataatacat caaggctttt ggcatccagg
     4741 ctaaacaccc atgtgtcatc aattccgcgc agttgctcta ttagttcggc ggctcgcaag
     4801 gataatggca cgtcacggct gtcgccgttt ttagttattg ggaggtgggc aatacgacgc
     4861 cgcatattca catctgccca ttttaggccg cagatttcgc ctgcccgcat ggcggtttcg
     4921 atggcaaata ggacggcaac ggcaacccgt tgcaccgcca ttttcggttt ctcattaggc
     4981 cggtatagga gggcggcgca aatatcggca atttcctgct cggttggccg tcttgtcctt
     5041 gcccggcttt ttttcggctt gctgattttg cgtacagggt tttcgcgaag aagtccccac
     5101 tctttcatgg cgtgttcgca gacggcggat aaagtggtta attcgcgtcc gacgctggtg
     5161 ggggatacct cctgcaaccg ttgatctcgc caatcggcga agtcttgagg gcgcaggtcg
     5221 gcaagccgca cctttgccaa aggtgttttt agtgcgcgtc caatgcggta tgattcttcc
     5281 cgtgcgcccc gctttgatgg tgtaacctcg gataaatacc gccggataag gtcggcaaag
     5341 atagtatttc gcggggcatt gccttggatg ccgtccataa tttgcgactc tattcgcgcc
     5401 gcccacgcct tcgcgtctga tgcccgctca aatgtggcgg aacgggaaac gcctttcata
     5461 cggatttgta cgcgccattt gccgttacgt tgagtgatgg ttgccatatt tattcgggtg
     5521 caattcgggt gcaaatataa tagagcaaaa cagatataaa gcggggcaaa atagggctat
     5581 attaa
//
LOCUS       DAWXHA010000117         5484 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.117, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000117 DAWXHA010000000
VERSION     DAWXHA010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5484
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.117"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(514..1395)
                     /gene="nadC"
                     /locus_tag="AABD07_001822"
     CDS             complement(514..1395)
                     /gene="nadC"
                     /locus_tag="AABD07_001822"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HFB2356292.1"
                     /translation="MPSENPLFALPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPCVRFQAEIQDGQAVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     ANHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFVA"
     gene            complement(1471..2409)
                     /locus_tag="AABD07_001823"
     CDS             complement(1471..2409)
                     /locus_tag="AABD07_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356293.1"
                     /translation="MDAYPEAEAPLQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQKRLKHIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIAEAAEPQANFDFALTGQTMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
     gene            2611..3723
                     /gene="nadA"
                     /locus_tag="AABD07_001824"
     CDS             2611..3723
                     /gene="nadA"
                     /locus_tag="AABD07_001824"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HFB2356294.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDHETAGRL
                     KDEIKVLLKRKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVAVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKHALTGGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            3775..5283
                     /gene="nadB"
                     /locus_tag="AABD07_001825"
     CDS             3775..5283
                     /gene="nadB"
                     /locus_tag="AABD07_001825"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HFB2356295.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIGKHVADTLEAGAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NHNDLHLTREGGHTCRRIAHVADYTGEAVMQSLIIQIRRRPNIRVYERQMALDVQTES
                     GAACGLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     IENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQSGERFMPHYDRRAELAPR
                     DIVARAIAAETAKQTQDFVSLDISRQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPSGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQG
                     IADGQAFQIEPFQRPSESPSAETDIFSNDLQNTFSRPVLQTFNQRHLGILRNDTDLHR
                     AIDQLRLWKQNQAEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
BASE COUNT         1174 a         1635 c         1578 g         1097 t
ORIGIN      
        1 tgtacaggat tgtatgttcc ttttcccact atttttgcaa acaagcgtaa agacaggctt
       61 tcagacggca taaaactgcc gcccccgtcc tttccccctg tcctgccgcc ggccggaatc
      121 atccgcattg ttcaaaagat gccttacaac cgccgcacgc cttgccctgc cgatgcctcc
      181 gcgccttcgg gcaaacaaaa tatagtggat taacaaaaat caggacaagg cgacgaagcc
      241 gcagacagta taaatagtac ggaaccggtt cacttgatgc ttcagcacct tagagaatcg
      301 ttctctttga gccggggcgg ggcaacgccg taccggtttt tgttaatcca ctatacctgc
      361 ctgaaatgct gttttttcta aagcatcacg accttcacga aaaatgccgt ctgaagaata
      421 tttcagacgg cattccctcc ctgaggcaat aaccggatta cggttaagcg gttccttacc
      481 tgacatatca gacagccgcc cgcaccctga aactcacgcc acgaaatcca aacctatgtc
      541 caacgatcgg ctgctgtggg tcagatagcc gagggcgatg ccgtccacgc cggtttgcgc
      601 cacgcgcttc aggcggtcga agccgatgcc gcccgatgct tcgcaataga cggtgtgggg
      661 gtgggcggtt tgtgtgtggc agcggtttgc cgcttctttc agggtttcgt cgtccatgtt
      721 gtccagcaaa atccgttccg cgcccgctgc gatggcttcg tccagttgtg ccaatgtgtc
      781 cacttcgatt tccacgcagg tcaatggtcc gaccgcctgt tttgcctgcc gaacggcttg
      841 ggcgatgctg ccgcaatagg cgaggtggtt gtctttgatg agcacggcgt cgtccaaacc
      901 catgcggtgg ttcgcgccgc cgcccgccct gacggcgtat ttttgcagga cgcgcagcag
      961 ggggatggtt ttgcggctgc acacgatgtc tgtaccgtat tcggcgacct cggcaacggc
     1021 acgagcggtg gcggtggcga tgccgcttaa gtgcgtgagg tagttgagcg cggtgcgttc
     1081 ggcggcgagc agcgcgcggg cgttgccttc gacggcagcc agtgtctgac ctgcgcggac
     1141 ggcttgcccg tcttggattt cggcttggaa gcggacgcac ggatccatcg tctgaaaggc
     1201 gaggcgcgcc aagtccatac cggcgataac accgtcttcg cggctgacga ggaaaagttt
     1261 ggcggttttg tcgggcgcga tgacggcggc ggacgtaatg tcgccgcgcc tgcccaagtc
     1321 ttcgctcaag gcttgttcca ccatagggcg caacaaggtg tcgggcaggg caaagagggg
     1381 gttttcagac ggcatggggt ttcctttgtt aaaaaagatt gatgttgcac cgatggggca
     1441 aaacttcatt tgatgccgtc tgaaaacggg ctaacggctg cccagcggca gtccgatgtc
     1501 cgaaatcagc ctgtcgggca ggacgtcgtc gcggaagcgg caaagctgcg cgggacggcc
     1561 tttgctgccc gatacgcctg tatccgacgg ctcgatgagg ttttgctgct gaatctggcg
     1621 gcggaagttt tgcttgtgca gcaatctgcc gctgatggct tcgacgctgt tttgcagttg
     1681 cagcagcgtg aattcgggcg gcatcagttc gaaaatcacg ggacggtatt tgattttggc
     1741 gcgcaggcgg gacagggcgg tcgccaacac gcggcggtgg tcgtggcgca tggtctgccc
     1801 cgtgagcgcg aagtcgaagt ttgcctgcgg ctcggcggcc tccgctatca gaccgctttc
     1861 atacaacatt tcatagcgtt gcaaaacgta ttcttccgac cagttttccg gttcgacccc
     1921 ccaacacaaa tgaatatgct tgagccgctt ttggcggact tcctccgtgt ccgccgagtt
     1981 tgcccaaatg cgcaggcggc tgacgacggc gtcgcgctgc ccgccgtcgg tgcgcaagtc
     2041 ttcccatggg aaatagccgt agcagtcctg ccatttcgcg tcgggatgca ggatgctatc
     2101 ggctgcctcg cgcaccagcc ccaaatagct gacgtacagc acgggcatgc cgtgttcgtt
     2161 gcggcggtgg gtatcgacaa aggtgtaaag ctgttccaca tagcccatag gctgcgaagt
     2221 ctgcttggcg acccacagct ttacgcccgc ctgcagggaa ttgcgcaggg gggaaagcgg
     2281 gccgttgggc aggagcgtgc cttgggcgac ggtcaacacc cgcaggccgc cgtcggtaac
     2341 ggcaatcaat acgggaacca gctcgacgat gctttgcagc ggagcttcgg cttcggggta
     2401 ggcgtccatg ctcggctttc tgcgggtggg aaaggcttta ttgtaaacca aagcggtttg
     2461 tcggaacgaa gcgggtcggt tttgcggtat cgcaaacctg ttttcagacg accttgcata
     2521 ttatactcaa gttgagcata atgtaaaaac agtttgaaaa acagacggca aaccttcatg
     2581 ccgtctgaaa accagctaca aggaaacatc atgcaaaccg ccgcccgccg ctcgttcgat
     2641 tacgatatgc ccctcatcca aacgccgact tccgcctgcc aaatccgtca ggcgtgggcg
     2701 aaggttgccg acacgcccga ccacgagacg gcaggtcgtc tgaaagacga aatcaaggtc
     2761 ttgctgaagc ggaaaaacgc ggtcttggtg gcgcattatt acgtcgatcc gctgattcag
     2821 gatttggctt tggagacggg cggatgcgtg ggcgattcgc tggaaatggc gcgcttcggc
     2881 gcggaacacg aagccggtac gctggtggtg gcgggcgtgc gtttcatggg cgagagcgcg
     2941 aaaatcctct gccctgaaaa aacggtgctg atgcctgatt tggaagcgga atgttctttg
     3001 gatttgggtt gtcccgaaga agcgttttca gcgttttgcg accaacaccc cgaccgcacg
     3061 gtggcggtgt acgccaatac ttccgcagcc gtgaaagcgc gtgccgactg ggtggtaacg
     3121 tcttcggtgg cgttggaaat cgtgtcgtat ctgaaatcgc gcggcgagaa actgatttgg
     3181 gggcccgacc gccatctcgg cgactacatc cgccgcgaaa cgggcgcgga tatgctgttg
     3241 tggcagggtt cgtgcatcgt ccataacgaa ttcaaagggc aggaactggc ggcgttgaag
     3301 gcagagcatc ccgatgctgt ggtgctggtt catcccgaat cgccgcaaag cgtcatcgaa
     3361 ctgggcgacg tggtcggctc gaccagcaaa ctactcaaag ccgccgtatc gcgccctgaa
     3421 aaaaaattca tcgtggcaac cgatttgggc atcctgcacg aaatgcaaaa gcaggcgccc
     3481 gacaaagaat ttatcgccgc gccgacggcg ggcaacggcg gaagctgtaa aagctgcgcg
     3541 ttctgcccgt ggatggcgat gaattcgctg ggcggcatca aacacgccct gacaggcgga
     3601 cgcaacgaaa tcctgttgga cagaaagctg ggcgaagccg ccaaactgcc tttgcagcgt
     3661 atgctcgact tcgcggcagg actcaaacgc ggggatgtgt tcaacggcat ggggcccgcc
     3721 tgatttgccg tccatatcgc cgtttcagac gacctctcaa acaaggacaa caccatgcaa
     3781 accgattgcg acgtattgat tgccggaaac gggctggcgg cactgacgct cgccctgtcg
     3841 ctgcctgaat cgttccgcat cgtcattttg tgcaaaaacc ggctggacga caccgccagc
     3901 cgtcatgcgc aaggcgggat tgcggcggcg tggtcgggag aggacgacat cggaaaacac
     3961 gtcgccgata ctttggaagc gggcgcaggt ttgtgcgacg aagccgccgt ccgcaccatc
     4021 ctgtcgcagg gcaaaccggc aatcgaatgg ctgctggcgc agggcgtggc gttcgaccgg
     4081 aatcataacg acctgcacct gacgcgcgaa ggcgggcata cctgccgccg aatcgcccac
     4141 gtcgccgact acacgggcga agccgtcatg cagagcctga ttatccaaat acgccgccga
     4201 ccgaacatcc gcgtttacga gcggcagatg gcgttggacg ttcaaaccga atcaggcgca
     4261 gcgtgcggac tgaccgtcct cgactgccga acgcaagaaa cctaccgcat ccgtgcccgc
     4321 cataccgtac tcgcaggcgg cggcctcggg caaatttacg ccgccaccac cacgccgccc
     4381 gaatgcacgg gcgacgccat cgccatggcg atacgcgcgg gttgcgcaat cgaaaacctc
     4441 gaatttatcc aattccaccc cacaggcttg gcaaggccgt ctgaaaacgg ccgcaccttc
     4501 ctgatttccg aagccgtgcg cggcgaaggc ggcatcctga ccaatcaatc gggcgaacgg
     4561 tttatgccgc attacgaccg ccgcgccgaa ctcgcgccgc gcgacatcgt tgcccgcgcc
     4621 atcgccgccg aaaccgccaa acaaacgcaa gacttcgtct cgctcgacat cagccgccaa
     4681 cccgcagcgt tcgtccgtcg gcatttcccg tccatccatc ggcactgcct gtcccaatgc
     4741 ggcttggaca tcacgcgcca agccatcccc gtccgccccg tgcaacacta cacctgcggc
     4801 ggcatccaaa ccgaccccag cggcagaacc tccctgccgc agctctacgc cttaggcgaa
     4861 accgcctgta ccggactgca cggagccaac cgcctcgcca gcaactccct gctcgaatgc
     4921 gtcgttaccg ccaggcttgc cgcccaaggc atcgcggacg gacaagcgtt ccaaatcgaa
     4981 ccattccaaa ggccgtctga aagcccctcc gccgaaacag acatcttttc aaacgacctc
     5041 caaaacacat tcagccgccc tgtcctgcaa acgttcaacc aacgccatct cggcatcctc
     5101 cgcaacgata ccgacctgca ccgcgccatc gaccaactgc ggctttggaa gcaaaaccaa
     5161 gccgaaccgc acaccgcgtc cgaatacgaa aaccgcaacc tactcgaatg cagcctcgcc
     5221 gtcgcccaag ccgcatacag gcggagacag aacatcggtg cgcattttaa tagtgattgt
     5281 taaggttggc tggttagaaa aaaatcgttc aaataaattt gaatagcatg gttaagagat
     5341 tggcattcag tttttatggt tgcgtaagtt gggttgaggc ctttgcaaaa aagcccttcc
     5401 ttcgacagcc gaaacccaaa cacaggtttt cggctgtttt cgccccaaat acctcctaat
     5461 tttacccgaa tatcccctta atcc
//
LOCUS       DAWXHA010000118         5386 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.118, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000118 DAWXHA010000000
VERSION     DAWXHA010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5386
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.118"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(429..1271)
                     /locus_tag="AABD07_001826"
     CDS             complement(429..1271)
                     /locus_tag="AABD07_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFB2356296.1"
                     /translation="MLICNPYEVVIHGTTSSGKIFRPGDWAERLCGILSSFTKDNRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNDPANERVLLAQAIEEKHAAEKTQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDIGRFTEQINKTQRPQGYRLLGIFEEGKHNAVAVCGFREACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKISAETGVTKIHLNVHVNHDRTDAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            1506..2426
                     /gene="pyrB"
                     /locus_tag="AABD07_001827"
     CDS             1506..2426
                     /gene="pyrB"
                     /locus_tag="AABD07_001827"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HFB2356297.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     VQRHPKDGAARVAAEFSCVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELEEADCRYRALGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLARAKPNLRVLHPLPRTDEIHPDVD
                     AAPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            2436..2894
                     /locus_tag="AABD07_001828"
     CDS             2436..2894
                     /locus_tag="AABD07_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HFB2356298.1"
                     /translation="MEAQKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLTLPDEI
                     AEVFRCPNPNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYNRDSVAEA"
     gene            2957..3607
                     /locus_tag="AABD07_001829"
     CDS             2957..3607
                     /locus_tag="AABD07_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356299.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSVRSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGILKLTAEYKKHLRRCLPFGNGVGFGRAQSGVEGNLENAGKA"
     gene            complement(4028..5251)
                     /locus_tag="AABD07_001830"
     CDS             complement(4028..5251)
                     /locus_tag="AABD07_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFB2356300.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPDAPQRYTVKQGDTLW
                     GISGKYLYSPWQWCRLWGANRDQIHNPDLIYPGQVLVLRYVGGEPRLDLEQTDGIPVV
                     KISPDKEVSGYGIPAIDVNFYRVFMQHPQIVSRKETAAAPRLLSGPEGRLLYTKDARV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSALEQRSKQAEE
                     RLKDNEYYTRTHPLITPVRTRSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMVPHEP
                     SRPVQAKIVSVFEGVGVGGQFKTITIDKGGDDGLDKGAVLSLYKRKKTMQVNLSNNLT
                     EEPKSRDTVELISTPAEEVGLAMVYHTAPKLAYAIILENISDISEGDTAANPGRDLDN
                     MPDQGRARVDSDPFQ"
BASE COUNT         1173 a         1383 c         1613 g         1217 t
ORIGIN      
        1 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacgaaacc gattcgcttg
       61 gtgcttcagc accttaggga atcgttctct ttgagctaag gcggggcaac gccgtaccgg
      121 tttttgttaa tccactataa atagcgagca tcgattcacg gtgcgcttta gtgcaaagcg
      181 tacaacgcga gcctgaacca ccagccgcaa taggaaaaga aagccgatag agtgcaatgc
      241 ttgccaacgc gcaagcgagc ttgcaagaac gcttggctca acgagagcag gcaagacaga
      301 aagcaggata ggagaggcaa cgcaaaggtc tcgggctttg atttcgccgt aaacctgagt
      361 gccgccttgt ccggacgggg tggttcaggc ggcgggtgcc gacagggtgc agatgaggag
      421 gagtattttc atttggggtc gcaacggaag tggtaggcgc agatttcaaa accgtttttg
      481 aaatacaggc ggtgcgcgtc ggtacggtcg tggttgacgt ggacgttaag gtggattttg
      541 gtaacccctg tttccgcgct gattttgcgg acttcttcca aaaggcgcga ggcgtagcct
      601 ttgcggcggc tttgcggcag ggtaacgatg tcgtcgatgt ggatgtggcg gccgccggcg
      661 agggtgcagg cttcgcggaa gccgcagaca gcgacggcgt tgtgtttgcc ttcttcaaaa
      721 atgcccagca ggcggtagcc ttgggggcgt tgggttttgt tgatctgttc ggtaaagcgg
      781 ccgatgtcgg tcagggcgga acgcaaaacg ctcaaggctg caaaggcggt ggcggtgtcg
      841 tccgcgccga tttcgcgtaa aacgtaggat gcgcccgagg cggtctgttc ctgtgttttc
      901 tcggcggcgt gtttttcttc gattgcctgt gccagcagga cgcgttcgtt ggcagggtcg
      961 ttttgtccgc cctgttcgcg ttcttcgagc agggctttgc agtcgatgac gcgcaggtcg
     1021 ttgtcggcgg caaagtccat caggaagcgg aacatctgcg gattgtcggt ttccagtttt
     1081 ttatcgacgg cgacgcagcg gatgttgtcc accagcatgg ggcgcaccca tttcgaatag
     1141 gagaggcggt tgtctttggt gaacgaggac aggatgccgc acaggcgttc cgcccagtcg
     1201 ccggggcgga aaatcttgcc ggaactcgtt gtgccgtgga tgacgacttc gtaggggttg
     1261 cagattaaca tggcggcttc ctgaaaagaa atgtctggcg cgattatacc ttatgcttat
     1321 gcgggcgtgt ttggatatgc cgtctgaaaa atacaggatt cgtgcggtaa aactttgtgg
     1381 aggcaaatgt gcgataatac gcgccgtgtc gccgcttttg cgaagctgtt ccgcaaacat
     1441 acgggcggcg tggacgtata accggatgcc cgcctgacgc gggtttttta cggaaggggg
     1501 gcaaaatgcc taatccgctt tacagacagc acatcatctc catttcggat ttgtcgcgcg
     1561 aacagttgga atgcctgctt cagacggcat tgaagctgaa ggcgcatccg cgcggcgatt
     1621 tgttggaagg caaactcatc ggttcgtgct ttttcgagcc gtccacgcgc acgaggctgt
     1681 cgtttgaaac ggcggtgcag cgtttgggcg gtaaggtcat cggcttttcg gacggcgcga
     1741 ataccagtgc caaaaaaggc gaaacgcttg ccgataccgc ccgtatcatt tccggctaca
     1801 ccgacgcgat tgtccaacgc catcccaaag acggcgcggc gcgcgtggcg gcggagtttt
     1861 cgtgcgtccc cgtcatcaac gccggcgacg gcacgaacca gcaccctagc caaaccttgt
     1921 tggacctggt aacgatttat gaaacgcagg ggcgtttgga caagcttaaa atcgccatgg
     1981 cgggcgactt gaaatacggg cgcaccgtgc attcgctgtg tcaggcgttg aaacgctggg
     2041 gctgcgaatt tgccttcgtc tcgccgccca gcctcgcgat gcccgactac attaccgaag
     2101 agttggaaga agccgactgc cgataccgcg ccctcggcag tttggaagag gcggcggaat
     2161 gggcggacat cttgtatatg acccgcgtcc agcgcgaacg tttcgacgaa caggaatttg
     2221 ccaaaatcca aggcaaattc aacctcgaag cgtctatgct cgcccgcgcc aaaccgaacc
     2281 tgcgcgtgct gcaccccctg ccgcgcacgg acgaaatcca ccccgatgtc gatgccgcgc
     2341 cgcacgccta ttatttcgag caggcgacca acggcgttta tgcgcgtatg gcgatattgt
     2401 cgctggtgtt gaacgaagaa gtgtgaggaa ccgatatgga agcgcaaaaa ctcagtgtcg
     2461 aagccatcga aaaaggcacg gttatcgacc atattcccgc cggcaggggg ctgaccatcc
     2521 tgcgccagtt caaacttttg cactacggca acgcggtaac cgtgggcttc aacctgccca
     2581 gcaaaaccca gggcagcaaa gacatcatca aaatcaaagg cgtgtgcttg gacgataaag
     2641 ccgccgaccg cctcgccctg ttcgcccccg aagcggtggt caacaccatc gacaatttca
     2701 aggtcgtaca gaagcggcat ttgaccctgc ccgacgaaat cgccgaagtg ttccgctgcc
     2761 cgaatcccaa ttgcgccggc cacggcgagc cggtcaaaag ccggttttat gttaagaaac
     2821 acaacgggca gacgcggctg aaatgccact actgcgaaaa aacctacaac cgggattcgg
     2881 tggcggaagc ctgacggatt cccgcagccc ggcggcggaa ttttgcctgc cgcctgtttt
     2941 gccaatctga aatggaatga tgatgcacgc ttctgtccaa agtcgtttcg caccgatact
     3001 ttatgttttg attttctttg ccggtttttt gaccgcgcaa atctggttca atcagaaagc
     3061 ctatactgaa gagctgcctc cgcttctgtc cgcattgtcc gccgtcgcgc tggtgtggct
     3121 ggcgtgggcg ttcgtgtcgg tgcgttcaaa ggctaaggca gaaaagttct accgcgaaaa
     3181 aatgatacag aacgaaagca tacaccccgt cctgcacgct tctttgcaac acttggaaca
     3241 caagccgcaa atgctcgccc tgctggtcaa aaaccacggc aaaggcatgg cggaacaggt
     3301 caggttcaag gcggaagtgc tgcccgacga cgaagacgcg cgcacgattg ccgccgagtt
     3361 ggcaaaaatg gatatgttcg cattggggac ggacgcggtc gcctcgggcg aaacctatgg
     3421 gcgcgtgttc gccgatattt tcgagttgtc ggcggctttg gaagggcgcg cgttcaaagg
     3481 gatactgaaa ctgacggcgg aatataaaaa acatcttcgg cgatgcctgc cgttcggaaa
     3541 cggcgttgga tttgggcgcg ctcaatcagg cgttgaggga aatctcgaaa acgccggaaa
     3601 agcctaagca gatattttat tgaaggtgtc ccgatgtatg gggagcgcac gggtggcgcg
     3661 gcggcaaagc ggcaagattg ggtttggata cccggttggt tttatagtag attaacaaaa
     3721 atcaggacaa ggcggcgggc cgcagacagt acaaatagta cggaatcggt tcgcccggtg
     3781 cttgggcacc ttagggaatc gttccctttg agccggggcg gggcaacgcc gtaccggttt
     3841 ttgttaattc gctatatctg tctgcaaggg agacagccgc tgtgatttcc gttcgggcgg
     3901 aaaccgattc catcggataa aaggcatttt gtccgactaa atcagggttt tgcatcaacg
     3961 ggatatgaaa acacagccta aataaaaatg ccgtctgaat gcttcagacg gcattgttgc
     4021 cgaggggtta ttggaaaggg tcggaatcga cgcgggcgcg gccctgatcc ggcatattgt
     4081 ccaaatcccg tcccggattg gcggcggtgt cgccttcgga aatatcggag atgttttcca
     4141 aaataatggc gtaagccagt ttcggcgcag tgtggtaaac cattgccaag cccacttctt
     4201 cggcaggtgt cgaaatcagc tcgacggtat ccctgctttt aggttcttcg gtcaaattgt
     4261 tggagaggtt gacctgcatc gttttcttgc gtttgtaaag gcttaaaact gcgcctttgt
     4321 ccaaaccgtc gtccccgcct ttgtctatcg taatggtttt gaactgtccg ccgaccccca
     4381 cgccttcaaa cacggaaacg atttttgcct gaaccgggcg ggacggttcg tgcggcacca
     4441 tattgaagcg gtcggtgtct tccggcattt tcatcaggta gtcgccctgc tgtatttcgg
     4501 aaatggcggt ttcgaccacc agcggctgta tcgaacgggt gcgcaccggg gtaatcaaag
     4561 gatgggtgcg ggtgtagtat tcgttgtctt tcagccgttc ttcagcctgt ttcgagcgtt
     4621 gttcgagggc ggagtcggta tagtcgaggg agcgcacgat gccgctgaat gcgacttctt
     4681 gtccgaggaa tttacccgta tccggatcgg tgatgttttt attgattcgg taggtcagat
     4741 aacggcccgg ctctttcagg cctttggtgt aaaccctggc gtctttggtg tacagcagcc
     4801 tgccttccgg gcccgagagc aggcgcggcg cggcagcggt ttctttgcgg gaaacgattt
     4861 gcgggtgctg cataaagacg cggtagaagt tgacatcgat ggcgggaata ccgtatccgg
     4921 acacttcctt atccggactg attttgacga cggggatgcc gtctgtctgt tccaaatcaa
     4981 ggcgcggttc gccgccaacg tagcgcaaca ccaatacctg gcccggataa atcaggtcgg
     5041 gattgtggat ttgatcccgg ttcgcgcccc acaggcggca ccattgccac gggctgtaca
     5101 ggtatttgcc cgaaataccc cacagggtgt cgccctgttt gaccgtgtag cgttgcggcg
     5161 catccgggcg cacctccaga tttgccgcca aagtttgtgt tgagaatgcc atacctgccg
     5221 cgcagagcag ggttataata cgacgttgca taaccgttcc ccttatctga taaatttcgg
     5281 tttgtcttgc ttgattgggt tggaaaaagc ggcggcagcc cctcgggatg tgccgcatga
     5341 taacaaatgt tccgcatttt aacatcgaat tatccgtacc atcacg
//
LOCUS       DAWXHA010000119         5358 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.119, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000119 DAWXHA010000000
VERSION     DAWXHA010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5358
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.119"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            102..1112
                     /gene="trpS"
                     /locus_tag="AABD07_001831"
     CDS             102..1112
                     /gene="trpS"
                     /locus_tag="AABD07_001831"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HFB2356301.1"
                     /translation="MSKKRVLTGVTTTGTPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEQEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANSENNQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFQELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLADGLAWGEAK
                     KLSAAKINAELAELRERYNALTSNPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            1193..1738
                     /locus_tag="AABD07_001832"
     CDS             1193..1738
                     /locus_tag="AABD07_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356302.1"
                     /translation="MLKIPFAVLGGCLLLAACGKSENTAEQPQNAAQSAPKPVFKVKY
                     IDNTAIAGLALGQSSEGKTNDGKKQISYPIKGLPEQNAVRLTGKHPNDLEAVVGKCME
                     TDGKDAPSGWAENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQ
                     NGRYVLEIDSEGAFYFRRRHY"
     gene            2055..2399
                     /locus_tag="AABD07_001833"
     CDS             2055..2399
                     /locus_tag="AABD07_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356303.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAAQAVESDVKDTAASAA
                     ESAASAVEEAKGQVKDAAADAKASAEEAVTEAKDAAAETKEAVSEAAKDTLNKAADAA
                     QEAADKMKDAAK"
     gene            complement(2609..4117)
                     /locus_tag="AABD07_001834"
     CDS             complement(2609..4117)
                     /locus_tag="AABD07_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HFB2356304.1"
                     /translation="MTTNPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSTSSQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPCGGKMLVIDIGGSSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQAAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMGGIIGGNEMLWYAVLSLRLAALFCRSRQDLGFP
                     KNMQLRTDTESCGFILRIDRKWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(4280..5116)
                     /locus_tag="AABD07_001835"
     CDS             complement(4280..5116)
                     /locus_tag="AABD07_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HFB2356305.1"
                     /translation="MNNASSEKTIEFAGRSWTKTADSLPQKAHGLRYGLGVSREINAG
                     GHHFLYGGISRGVHYWDNKDFSEQSLRLSFGHQNRSVTRSFGTVPFVGQNLLGGSRYN
                     FAGGFNADFSRRLGERWRLTLNAGNMWKHYQEDRTAARYGSHMPLAGATLMYSAPKDR
                     LLYGGADWPHDMTKEAEQASVRKGLRVGAVKTFDGGLGLRANLRYTRRTFDAPGTIVY
                     RFPRKDHEYQANLSLRHDKISWKGFTPQLNFRYLKIDSNMKSFYTRKNTQIFMSVEKD
                     FK"
BASE COUNT         1275 a         1410 c         1471 g         1202 t
ORIGIN      
        1 atatggaaaa gtctgttgtc ggctggatgt atgtggcaaa tcgggtataa tcggcgcatc
       61 ttttcccttt cagacggcat tgctgccgta aggacatttt tatgagcaaa aaacgagttc
      121 tgaccggcgt aaccaccacc ggcaccccgc atctgggcaa ctacgtcggc gccatccgcc
      181 ccgccgtccg cgcggcgcaa aaccccgata ccgaatcctt cctcttcctc gccgattacc
      241 acggcatcat caaatgccac gagcaggaga tgattcacca atccacccaa gccgttgccg
      301 ccacttggct tgcctgcgga ctcgaccccg agcgcaccac cttctaccgc caaagcgaca
      361 ttcccgaagt gatggagttg aactggattc tgacctgcat caccgccaag ggtttgatga
      421 accgcgccca cgcctacaaa gccgccgtgc aggcaaattc agaaaacaat caggaagatc
      481 ccgatttcgg cgtggaaatg ggtttgttca gctatccgat tctgatgact gccgacattt
      541 tgatgttcaa cgccaacgaa gtccccgtcg ggcgcgacca aatccaacac gtcgaaatgg
      601 cgcgcgacat tgccggccgc ttcaaccacc gtttccaaga actcttcacc ctgcccgaag
      661 tgaaaatcga cgaaaacgtc gaactcttgg tcggtttgga cggacgcaaa atgtccaaat
      721 cctacggcaa taccattccg ctttgggaaa acgacaaaaa aacccaaaaa tcggtcaaca
      781 aaatcattac caacatgaaa gagccgggcg agccgaaaca gcccgacgaa agccctttgt
      841 ttgaaatcta taaagccttc tccacgccgt ctgaaacggc ggaatttacg caaatgcttg
      901 ccgacggctt ggcttggggc gaggcgaaaa aactttcggc ggcgaaaatc aacgccgaac
      961 tggcagaact gcgcgaacgc tacaacgcat tgacctctaa tccttcgcaa atcgaagaga
     1021 ttttgcaggc aggcgcgcaa aaagcgcgca aagaagcgcg cgaattgttg gataaagtac
     1081 gcgatgcggt cggcatccgc ccgttgaaat aaacccaatg ccgtccgaac ctccgcctgc
     1141 cacgtttcag acggcatttc agacggcatt ttgaaaccat caggagtgcg gaatgctgaa
     1201 aatacctttt gccgtgttgg gcggctgcct gctgcttgcc gcctgcggca aatccgaaaa
     1261 tacggcggaa cagccgcaaa atgcggcaca aagcgcgccg aaaccggttt tcaaagtcaa
     1321 atacatcgac aatacggcga ttgccggttt ggctttggga caaagtagcg aaggcaaaac
     1381 caacgacggc aaaaaacaaa tcagttatcc gattaaaggc ttgccggaac aaaacgccgt
     1441 ccggctgacc ggaaagcatc ccaacgactt ggaagccgtc gtcggcaaat gtatggaaac
     1501 cgacggaaag gacgcgcctt cgggctgggc ggaaaacggc gtgtgccata ccttgtttgc
     1561 caaactggtg ggcaatatcg ccgaagacgg cggcaaactg acggattacc tgatttcgca
     1621 ttccgccctg caaccctatc aggcaggcaa aagcggctat gccgccgtgc agaacggacg
     1681 ctatgtgctg gaaatcgaca gcgagggggc gttttatttc cgccgccgcc attattgagt
     1741 tattcggaca tcacggaata tatttggatt tttcaaacct tgcggaaaaa gtccgcgccg
     1801 ccgggaaact caaaaggagg ggatgtgtgt tacaattttc cgaactgttt tcataaaata
     1861 gttttcggac gtgtttcaat atggcattga tgccgccttg ttgttcgaga aaaaaccctt
     1921 tatatttaat ataatgggtt ttaactaaac gggaaaccgt tttctctccg gccgatgggc
     1981 aaaatcagcc gattgatgga acacggtccg gtttttaagc aaaaccttaa tcaacaactc
     2041 aagaaggata agacatgaaa aaattattga ttgccgcaat gatggcggct gccttggcag
     2101 cttgttcgca agaagccaaa caggaggtta aagaagcggc ccaagccgtt gagtccgatg
     2161 ttaaagacac tgcggcttct gccgccgagt ctgccgcttc tgccgtcgaa gaagcgaaag
     2221 gccaagtcaa agatgctgcg gctgatgcaa aggcaagtgc cgaggaagct gtaactgaag
     2281 ccaaagacgc ggcagccgaa accaaagaag cggtaagcga agcggctaaa gacactttga
     2341 acaaagctgc cgacgcggct caggaagcgg cagacaaaat gaaagacgcc gccaaataat
     2401 ttgttgcctt ggcaaaaatg acgagatgcc gcctgccggc aacccaaatg aaaccgcctg
     2461 aagattttca ggcggttttt gagttgtatg ccccttgttt tttacgcctg catgaccgtg
     2521 cagggaggat gtgccgcgca tatcgggata ttgcggacag ggaaatgccg tctgaacatc
     2581 atttagacgg catttggttt gtcaaggttc agacggcttc aactttgaac ggcatattga
     2641 ttttttgcca ttggacgctt tcatattcca atgcgtcggc aatcaggggg tggcgttcca
     2701 gccatttcct gtcaatacgc aggatgaagc cgcagctttc cgtatccgta cgcaactgca
     2761 tatttttcgg gaaacccaga tcttggcgcg aacggcagaa cagggcggca aggcgcaggg
     2821 acaaaacggc ataccacaac atttcgttgc cgccgataat gccgcccatt tttttcatat
     2881 cgccgcgatg accgatgacc agttgggcaa gtatggtctg ttccttgcgt gaaaaacccg
     2941 gcatatcggc gttttcgagg atgtaggcgg aatgcttgtg atagccggtg tgggcgatgt
     3001 ccaaaccgat ttcatgcagc gcggcggcgc gtccgagata ctgttgccac aaggcaagtt
     3061 cttgaaccgt aacgtttttg gcatgacaga ggctgtccat aaaggtttgc gcggtctcgg
     3121 cggtgcgttt cgcctgattg aggctgacgt ggtagcggtg ttggaactcg gcaaccgttt
     3181 gtccgcgcat atcttcgttt aagccgcgcc cgatcaaatc gtaaaacacg ccgtcgcgca
     3241 gggcggcttc ggttacggtc atcctgtcga gtttcatttc ctcaaacgcc gccatcatca
     3301 cggcaagtcc gccggcaaaa acttcgatgc gttccggttt caggttttca aatttggctt
     3361 ttttgaccga accggcttcg atgatgcgtt cggcgagggc gcgcattccc ttgtaggtaa
     3421 tgtccgcctc ttggggcatt tcggcggcaa gcacgtcgcg gatggatttt gccgaacccg
     3481 atgtgccgac ggcgaaatcc caaccttcgc gcctcatatt tttgctgatg cgctggattt
     3541 cgttgcgggc ggcggaaatg gcggcttgga agtctttggc ggtgattttg ttttggaaga
     3601 agcgcaggct gtaggttacg cagcccaagg gcaggctttc ggtaatgtcg ggattcagcg
     3661 tcgaaccgat gacaaattct gtcgaactgc cgccgatgtc gataaccagc attttgcccc
     3721 cgcagggggg gagggtgtgg atcacgccgg tataaatcag ccgcgcctct tcgcgcccgg
     3781 cgatgatttc gatggggaaa cccagtgccg cttcggcctt gggaaggaaa tctgcgatgt
     3841 ttttggcgac gcggaatgta ttggttgcca cggcgcgcac ctgctcgggg cggaagccgc
     3901 gcaggcgttc gccgaatttt gccaggcagt ccaaagcctg ttcctgcgag gatgtgctga
     3961 ggtttttctg ttcgtccaga ccggcggcaa aacggaccat ctgtttgaag gaatcgatga
     4021 cttttaattg tccgttgttg ttttcgcaaa tctggaggcg gaaactgttg gaacccaaat
     4081 cgacggaggc gaggacgttt gcgggattgg tggtcatggc ggataccggt gggggaaaaa
     4141 cgcaatgtta ctctgacggc gcaggcgttg acaataaatg atgcggctgt ttttgattct
     4201 gctcacggat gttgccgacg gtatgtttcc gacagcaaaa aatgccgtct gaaaaacgtt
     4261 cggacggcat tttttgcgct tatttgaaat ccttttccac gctcatgaaa atctgcgtat
     4321 ttttgcgtgt gtaaaaactt ttcatattgc tgtcgatttt cagatagcgg aaattgagtt
     4381 gcggcgtaaa gcccttccaa gagattttgt cgtgccgcaa cgacaggttt gcctgatatt
     4441 cgtggtcttt gcgcgggaag cggtacacaa ttgtcccggg tgcatcaaaa gtcctgcggg
     4501 tatagcgcag gtttgcccgc agccccaagc cgccgtcgaa cgttttgacc gcgccgacac
     4561 gcaaaccctt gcggacggaa gcctgttccg cctctttcgt catgtcgtgc ggccagtccg
     4621 caccgccgta aagcagccgg tctttcggcg cggaatacat cagcgtcgcg cccgccagcg
     4681 gcatatggct gccgtatcgg gcggcggtgc ggtcttcctg ataatgcttc cacatattgc
     4741 ccgcgttcag cgtcagccgc cagcgttcgc ccaagcgtcg ggagaaatcg gcattgaagc
     4801 cgccggcgaa attgtatcgg ctgccgccca agaggttttg cccgacaaac ggcacggtgc
     4861 cgaacgagcg cgttaccgaa cggttttgat ggccgaacga caggcgcagg ctctgttcgc
     4921 tgaaatcttt gttatcccaa taatgcacgc cgcggctgat gccgccgtag aggaaatgat
     4981 gcccgcccgc attgatttcg cgcgacacgc ccaagccgta gcgcaaaccg tgtgcctttt
     5041 gcggcaggct gtcggcggtt ttcgtccagc ttctgcccgc aaattcaatc gttttttcgg
     5101 acgaagcgtt gtttatagcg gattaacaaa aatcaggaca aggcggcggg ccgcaggcag
     5161 tacggatggt acggaaccga tccgcccggt gcttgggcgt cttagggaac cgttcccttt
     5221 gagccggggc ggggcaaccc gtaccggttt ttgttcatcc gccatattgt gttgaaacac
     5281 cgcccggaac ccgatataat ccgcccttca acatcagtga aaatcttttt ttaaccggtt
     5341 aaaccgaata aggagccg
//
LOCUS       DAWXHA010000120         5347 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.120, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000120 DAWXHA010000000
VERSION     DAWXHA010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5347
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.120"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(340..3172)
                     /locus_tag="AABD07_001836"
                     /pseudo
     CDS             complement(340..3172)
                     /locus_tag="AABD07_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226199.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin family TonB-dependent
                     receptor"
     gene            complement(3169..5342)
                     /locus_tag="AABD07_001837"
                     /pseudo
     CDS             complement(3169..5342)
                     /locus_tag="AABD07_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225048.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
BASE COUNT         1135 a         1429 c         1255 g         1528 t
ORIGIN      
        1 ctcaaaaatt tatgccatta aatcaataat ttctgatgaa ttttgaaaac ttaatcccgt
       61 cattcccgcg caggcgggaa cccggttcat tgagcttcag ctatttagaa taaattttga
      121 aactctaatc gcgtcattcc cacgaaagtg ggaatccggt tttttgagtt tcagtcattt
      181 ccgataaatt gccttagcat tgaatgtccg gattcccgcc tgcgcgggaa tgacggcgga
      241 aatcttgttt atattgaatc aaaaaaacct gcaccttaat cagttggcgg tttagtccga
      301 cttttggggt gcagatcaag cttccagacg gcatttcctt taaaacttca tttcgagcgc
      361 gaggctgaag ttcctgcccg gtgcggcata ccttccatag ttgctgtcgc cgccgtgccg
      421 gtttgccgtg ctttccgcag tctggcgcaa ggattcccaa gtaacgtagc ggtagttgcc
      481 gatattgtag atagccgccc tcaaggtcag ccgttttttc agattcagat aagcggaaac
      541 atctgccgtt ttccaagaag acgtaaccct tcctgccgaa tatcgttttt gatcgcctgc
      601 cagataagca agctcgtcag ggtttttccc tttggaatag gtcagcataa tgtttgcgcc
      661 ccatttcccc tcgggctggt cgtatccgaa ccccaaaaca taacgcgacg gctgtaccgc
      721 atccaaagca tagctgcgga gggacaagtc cggccggttg gataccgatt tcggtttgat
      781 acggttgtac gccaatgtgg tgtacaggcc ttcgggcagt ttgccgtata cgccgttcca
      841 gtcgattttc cccaagatgt tgatgccttg aagcgacata ttttgggcat tgtaataatc
      901 gcgtatatca atctctgtca atcgtcctgc tgaatccggc aatttggttt tttgatcggc
      961 aacggcaatc atatcggtat aacggttgcg gaaactgctg atttccaaaa agccgaaatc
     1021 gcccttccac tgcaaaccga tttcccggtt ggctgccttt tccgatttca gggcgggacg
     1081 ctgccagcct ttcggataat cgtgataaat gtctatcccg aaaagttctt ggaaggaagg
     1141 cgttctgaag ccgctggagg cgcggtaaga cacggaaaaa tgccggttcg gtttgaacac
     1201 gatgccgctg ttccacgaac ggtcggcata ccgcccgctg cggacgagtt cttccgacgt
     1261 ggtgaagttt tgccggtcat acctgccgcc caagctgaaa tcaaaatatt tgccgattga
     1321 aaaacggtcg ttcaaagaaa tgtggatatt gctgccgttg atttttcttg gcacgcattt
     1381 gcgggaacgc agggtttcga tgtagccgca gaccgaccct tcgacgactt cgggcttacc
     1441 caaacggtac ttatcttgat tcttttcatc gaatcccgtg gattccgaaa tccttgccgc
     1501 attgtgggaa agctgttcgg ggcgggagat cgctttggaa gcatcgtaac cgaagcccaa
     1561 agtcagatgg tgtttcgtcc atttgttttt cagcgacttc tcaaacgagg cattcaaaac
     1621 attgtgctgt tcgcggtagt ggaaacggtc gctgctgtcg taggaatacg gtttgtccgc
     1681 cgacgcgcgg caggatttgt ccacggcagg atacacggcg caattcagct tcagcgtgtt
     1741 gttgtcggtt gccacgccct gtttgtcaaa cgacaacacc gccttatccg cccagttgtc
     1801 cgagtatttc tcattttcat aacggtacag caaacccata cggcggcggc ggtgatgttc
     1861 gtcaataaat ttggtgcggg aatatttcaa acctatgccc ttgaccaaat ttttatcgcc
     1921 cttccactct tctatattcg gcacaaaata caagccgtcg cggaaatcgt cgccgtcgta
     1981 caccccgctc ttgtctctaa acttttccgc ctcgtccgta ccgtaatact gtttttccgt
     2041 catatcgcgg atgtcgtaac gctgtttggt atcctcaaac acgccgccga cataatgcct
     2101 gccgccgaag cggtagccca gcttggcaag ccaagagccg ctgcggtaat ccatcggatc
     2161 gggcaatatc ctgccgccgc ccgtgtaggc ttgggcggac aggttttcgt ggcgcgcctg
     2221 cgcctcccgc acctgcgcct cttcttcagc acttaaaagg ctgattttgt tcaatacgtt
     2281 cttttaccca gcggttgagc tggcggttca aatatatccc gtagcccgcc aattttgcca
     2341 cgggcttgag tgtattctcg ccctctacta agaaaaatgg ctctgttgtc ttgcgtttaa
     2401 tatcgtatgt ctggcggaac gcgtccaaac ggtctatgcc gtattccacc ccgtccgcaa
     2461 tatcgccgtg cgggcgcgtt tcccgccctt ggcgttcggt tcggattagc agcccttccc
     2521 aaccgtcttt gctgaacccc gcgccgagcg acttcataaa ttggcggttt ttactgccgt
     2581 aagcggtttt tgcctgtatc ccccggcttt tgccgtctga aatcaggtct gccgcctctt
     2641 tggtgcggaa ggcgaccgcg ccgccgagtg cgccgctgcc gtgatcggac gaaccggcgc
     2701 ctttgtcgat ttccaccgtg ctgatgtttt catattcgat ttcgttgatt gcgccgctgc
     2761 cgccgcgtcc gccgtatccg ctcaacgatc cctgcacggt aaacgcctgt atttgggcaa
     2821 cgccgtcaac cgaaaccgcc acacggtttt tatctacgcc gcgtatcgag tagccgccgc
     2881 tcgcgccgtt gccctgttcg acaaccgcca cgcccggatc gtagcgcgtc aggtcgcgga
     2941 taccgagtac ctgttctttg ttcaacgttt ccgacgtttt gacgattttg cccaaacctg
     3001 tcgcctcttt cgatcgccgt cccactttgg cggcacggac ggtaacctct ttcaatgatt
     3061 gactttgcgc cgcatcaagt gccgccgccc ccgcttgggc agcataagcc ggaaaagcgg
     3121 ttgcaatggc caacgccgtc aaagtcagcg gaaaaccgtg tttcttattc atttttccac
     3181 ctctttatta tctttcttcg caccgaatac cacgccgaat tggggtttaa cttcaggttc
     3241 taactgttcg ccaacatcag cttcattttc aacttcattt tcaatatctt cagttatacc
     3301 aagagatttc ccatccttat tgaaaatagt gccgcccaat tctgccgcct gcgggccgta
     3361 aaagccgccc gttacaagaa gattgtcggc tttgaaactt tgaggattag tcgaaccatt
     3421 tcccgaaaga ttgatgccgt tatcccgagt gcgtgctgtt gcgtggaaac cgttgccctc
     3481 aatcacgccg ttttcaatac ggaaagcagg ttctacaccg ttttgctccg tcagcgttcc
     3541 ggaaatcgat ttattgccga aatcaacgtc aaattctgct tttgccgctt tatccgcctt
     3601 attatcccat tgaatgggtt cgccgatatg cgcttcccaa gtgccggtat aatgcgccgt
     3661 tccggttttt ggaatgtcgg cttccgccgt gcggatacct ttcaggaaaa ggtcgatgtc
     3721 cctgccttta agggcttccg gggcgggcgg gatgccgtct gaaacaccgt tgccttcttc
     3781 cggcgattct tcttcgggtt cttcctcttc agcttcttct tcgatttctt cagcttcatc
     3841 agcttcttct tcgacgattt cgtcttcgtc ttcgccgtta tcatcttcgg aaacttcgtc
     3901 ttcgctttct tcggcgattt cttcgtcttc gctttcttca ccgttattaa tacccgaatc
     3961 ctcttcgtcc tgcgccttcg gtttgacggc ggggcgttcg gtttttatcc gtccgagttt
     4021 cacataggtc aaaaagtcgc aacaagcact gacggtcatt ttcctgccgt cggcaagatc
     4081 gatggttttc tctttgctaa ccaaaggaat ttcacgccct tcgacaagaa gtttgtcagg
     4141 atgaccaaaa tcgggcatag tggaaacctc aaacggacgg ggattttcat cagtcgcctc
     4201 gtcaacggaa atttttagag aatccaagat tttggtgtgt tttccaaacg gcatagcagg
     4261 atttgtgcct gatgcgtttg ttttttgttt gcctgcgaat acgccgaata cgccgttgtc
     4321 gttactgata aaccgtccgg caagctcttc tccgttatcg ccgaaaaaac cgccctcaag
     4381 ccgctgatcg gcatcggtat ggaaaaacaa atattcttta tcagcgtgtc tcgtcttcac
     4441 ctcggtgtta actttggcac tgccggtaaa gcggttgccg tttaaatcgg cagtgatgtt
     4501 gtaaatggtc agcggttttt taggatcatt tttcttttgc acatactgat ttttaatcag
     4561 ctcgcccttt aggatttttt tgtcgaaatc aaccgtatat tcggcaggat gtttttccct
     4621 gtcgtcggca tccttagccg cataagaagt tgcaccaata tcgttaccat aaaatgttat
     4681 ataacccaaa tcgtcactgg caaccgcctt acctgtccga tgacgtttga catcggtcat
     4741 atattgccag ttgccggaat attgcaccgt tcccgcgctc ggtaaagatt gggaaggacg
     4801 ttctccggaa taatatacaa aaccgtcata accaaaacgg tgggtaaacc gcttaccacc
     4861 tgagttctgt tcgatttcat cttttccgtt tttagtatat acataaccgg catccacaaa
     4921 tttataatta tattttttat tttccttttc tgacgtccta atttctacat cggaatcacg
     4981 tttatgaatt tcgcttttaa gttgttgaag tttatttcct tttgaaccgt ataaaaacag
     5041 aacatcacct tctttaaacg acagcttttc ttctgcttgt ttgctatcgg gaattgccgt
     5101 gccatcttca cgatgaaaag cagtattccg cctcaacaac cgcattgccg caccgacggc
     5161 gggccggttg accggcgtgg tttctaccga aggctcggca ggggggggga agtgggaacg
     5221 tccttagact tgaaagtgac ggggtacgcg gtcggcgttg attcgacaac aggctgcacg
     5281 ccgaaattgc cgccgcagga tgccagcatc aacggcagca aggcaatacc gtaataattc
     5341 agtttac
//
LOCUS       DAWXHA010000121         5273 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.121, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000121 DAWXHA010000000
VERSION     DAWXHA010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5273
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.121"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..285)
                     /locus_tag="AABD07_001838"
     CDS             complement(<1..285)
                     /locus_tag="AABD07_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HFB2356306.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGREPHSVSLIAVSKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERA"
     gene            405..1448
                     /locus_tag="AABD07_001839"
     CDS             405..1448
                     /locus_tag="AABD07_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HFB2356307.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEA
                     ARRRAQNSESMSF"
     gene            1612..2838
                     /locus_tag="AABD07_001840"
     CDS             1612..2838
                     /locus_tag="AABD07_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFB2356308.1"
                     /translation="MNTDNLHDILDETVQVYSQKKQSRSETPAEIGTHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMRELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPGHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKKDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            2955..5114
                     /gene="yccS"
                     /locus_tag="AABD07_001841"
     CDS             2955..5114
                     /gene="yccS"
                     /locus_tag="AABD07_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HFB2356309.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYEALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIRRLLEMQ
                     GQACRNTAQAIRSGKDYTYSKRLGRAIEGCRQSLRLLSDGNDSPDIRHLSRLLDNLGS
                     VDQQFRQLRHSDSPAENDRMGDTRIAALETGSFKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVYQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIAGTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSSGTYLQKIAERLKTGETGETGD
                     DIEYRITRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGA
                     YRSEMHEECSPDFTAQFHLAAEHTAHIFQHLPDMGPDDFQTALDTLRGELGTLRTRSS
                     GTQSHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT         1328 a         1871 c         1157 g          917 t
ORIGIN      
        1 cgcgcgttcg gcgacaaatt tggttttgtt ggactgcaca tcgccgatga cgtgccacac
       61 gatgtcggtc aaatccgcca attcctccgt tttgccgtac cactcctgaa tatagttctc
      121 gccgaaatca cgctgtccgg cagcgtaaac ttcgcggatg ccgtctgaag ggaaggtctt
      181 gctgacggca atcaggctga cggaatgcgg ctccctgccc gcctgcagaa ccaattttcc
      241 gatacggtcg gacacctcac gataacgttc ttgcaacacc gtcatagatc atcccctaat
      301 taaaaatgat taaacagttg aaacccctcc agtcagggcg gtataatcaa ggttgttaga
      361 atcattccaa ccaatcgaaa cattatacta aacagagccg cattatgcag attaccgact
      421 tactcgcctt cggcgctaaa aacaaagcat ccgaccttca cctgagttcg ggcatatccc
      481 ctatgattcg ggttcacggc gacatgcggc gcatcaacct tcccgaaatg agcgcggaag
      541 aggtcggcaa tatggtaact tcggtgatga acgaccacca gcggaaaatc taccagcaaa
      601 acttggaagt cgacttctcg ttcgaactgc ccaacgtcgc ccgattccgc gtcaacgcct
      661 tcaacaccgg ccgcggcccc gccgccgtat tccgcaccat tcccagcacc gtcttatcgc
      721 tggaagaatt gaaagccccg agcattttcc aaaaaatcgc agaatcgccg cgcggcatgg
      781 tattggttac cggccctacc ggttcgggca aatcgaccac gcttgccgcg atgatcaact
      841 acatcaacga aacccagccg gcacacatcc tgaccatcga agacccgatc gaattcgtcc
      901 accaaagcaa aaaatccctg attaaccaac gcgagctgca ccagcacacc ctcagcttcg
      961 ccaacgcgct gagttccgca ttgcgcgaag acccagacgt tatccttgtc ggcgagatgc
     1021 gcgaccccga aaccatcggc ttggcactga ccgccgccga aaccggacac ttggttttcg
     1081 gcacgctgca cacgaccggc gcggcaaaaa ccgtcgaccg tatcgtggac gtattccccg
     1141 ccggagagaa agaaatggtg cgttccatgc tgtccgaatc gctgaccgcc gtcatctccc
     1201 aaaacctgct gaaaacgcac gacggcaacg gccgtgtcgc ctcgcacgaa atcctgattg
     1261 ccaaccccgc cgtccgcaac ctcatccgcg aaaacaaaat cacgcagatt aactccgtcc
     1321 tgcaaaccgg gcaggcgagc ggtatgcaga cgatggacca atcgctgcaa tcgctggtgc
     1381 gccaagggct gatcgcaccg gaagccgcac gcagacgcgc gcaaaacagc gaaagtatga
     1441 gtttctgaca cacaaccgcc ttccggccat gccggcggga aaacaaggcg caaacacgcg
     1501 gggcgggacg cagcatcccg cccggcatac ccttccgaac aggaagcgtc cgccttcctg
     1561 ttgaaacctg ccgccgcaaa ctgcaaggct taaaccgaaa agaagctaac gatgaatacc
     1621 gataacctgc acgacatctt ggacgaaacg gttcaagtgt attctcaaaa aaaacaaagc
     1681 cgatccgaaa ccccggccga aatcggcaca cacttccacc cgctgctcga ccgcctgtgc
     1741 gaaaccgcag aagcacaaaa cgcgtccgac atccttatca gcaaaggatt cccgccctcg
     1801 ttgaaaatca acagcgcatt aaccccgcag ccgcaaaagg ctctgacggg cgaggaaacc
     1861 gccgccatcg ccgcatcgac gatgaacgcc gaacaatcgg aaatattccg gcgcgacggc
     1921 gaaatcaact actccgtcca atcgcgcagc ggcacgcgct accgcgccaa cgcctaccac
     1981 agccaaggca gcgcaggttt ggttttgcgg cgcatcaacc acgtcatccc gcaaatgcgg
     2041 gaattgggct tgcccgaaaa actcaaagac ctcgccgtcg caccgcgcgg gctgctgatt
     2101 atcgtcgggc ctaccggttc gggcaaatcc accacgatgg cgactatgct cgaacaccgc
     2161 aacaaaaccc tgcccggcca tatcgttacc atcgaagacc cgattgagtt tatctacaaa
     2221 ccgcgccgct gcatctttac ccagcgcgaa atcggcgtcg acaccataaa ctggcagacg
     2281 gcggtacaaa acgctatgcg ccaatcccca gacgtggtct gtatcggcga agtccgcagc
     2341 agggaaagta tggaatacgc gatgcagctc gcccaaaccg gccacctgtg catttttacg
     2401 ctccacgcca acaccgcgcc gcagtcgctc gaacgcatac tcaacttcta ccccaaagaa
     2461 cagcacaacc aaatactgat tgacatcgcc ctcaatctga ccggcatcat ctgccaacgc
     2521 ctcgccctca aaaaagacaa aacgggcagg acggcggttg tcgacttgct catcaacacg
     2581 cccgccatcc aagacttcat cctgaagggc gacctgatga acatcagtaa aatcatggaa
     2641 accgccaaaa ccgacggaat gcagacgatg gaccaaaacc ttttcgaact gtaccgtcac
     2701 ggcatcatca gttacgaaga agccctgcgc cagtccgttt ccgccaacaa cctgcgattg
     2761 cacatccaac tgcacaaaga aggcaaaacg cccgaactcc tttacgacag ggtcaacggt
     2821 ctcaacctca tttcctgatc cgcaaaaccc aatgccgtct gaaaaccgca tccccgtttt
     2881 cagacggcat gattttatcc gccccattca tgtgccacac tttattcact tcataacaat
     2941 aaaccggtaa aaccatgaaa accccactcc tcaagcctct gctcattacc tcgcttcccg
     3001 ttttcgccag tgtctttacc gccgcctcca tcgtctggca gctaggcgaa cccaagctcg
     3061 ccatgccctt cgtactcggc atcatcgccg gcggcctggt cgatttggac aaccgcctga
     3121 ccggacggct gaaaaacatc atcgccaccg tcgccctgtt taccctctcc tcgctcacgg
     3181 cgcaaagcac cctcggcaca gggctgccct tcatcctcgc catgaccctg atgaccttcg
     3241 gctttaccat tttaggcgcg gtcgggctga aataccgcac cttcgccttc ggcgcactcg
     3301 ccgtcgccac ctacaccaca cttacctaca cccccgaaac ctactggctg accaacccct
     3361 tcatgatttt atgcggcacc gtactgtaca gcaccgccat catcctgttc caaatcatcc
     3421 tgccccaccg ccccgtccaa gaaagcgtcg ccaacgccta cgaagcactc ggcggctacc
     3481 tcgaagccaa agccgacttc ttcgaccccg atgaggcagc ctggataggc aaccgccaca
     3541 tcgacctcgc catgagcaac accggcgtca tcaccgcctt caaccaatgc cgttccgccc
     3601 tgttttaccg tttgcgcggc aaacaccgcc acccgcgcac cgccaaaatg ctgcgctact
     3661 acttcgccgc ccaagacatc cacgaacgca tcagctccgc ccacgtcgac taccaagaga
     3721 tgtccgaaaa attcaaaaac accgacatca tcttccgcat ccgccgcctg ctcgaaatgc
     3781 aggggcaggc gtgccgcaac accgcccaag ccatccggtc gggcaaagac tacacataca
     3841 gcaaacgcct cggacgcgcc atcgaaggct gccgccaatc gctgcgcctc ctttcagacg
     3901 gcaacgacag tcccgacatc cgccacctga gccgccttct cgacaacctc ggcagcgtcg
     3961 accagcagtt ccgccaactc cgacacagcg actcccccgc cgaaaacgac cgcatgggcg
     4021 acacccgcat cgccgccctc gaaaccggca gcttcaaaaa cacctggcag gcaatccgtc
     4081 cgcagctgaa cctcgaatca ggcgtattcc gccatgccgt ccgcctgtcc ctcgtcgttg
     4141 ccgccgcctg caccatcgtc gaagccctca acctcaacct cggctactgg atactgctga
     4201 ccgccctttt cgtctgccaa cccaactaca ccgccaccaa aagccgcgtg taccaacgca
     4261 tcgccggcac cgtactcggc gtaatcgtcg gctcgctcgt cccctacttc accccctccg
     4321 tcgaaaccaa actctggatc gtcatcgccg gtaccaccct ctttttcatg acccgcacct
     4381 acaaatacag tttttccacc ttcttcatca ccattcaggc actgaccagc ctctccctcg
     4441 caggtttgga cgtatacgcc gccatgcccg tgcgcatcat cgacaccatt atcggcgcat
     4501 cccttgcctg ggcggcggtc agctacctgt ggccagactg gaaatacctc acgctcgaac
     4561 gcaccgccgc ccttgccgta tgcagcagcg gcacatacct ccaaaaaatt gccgaacgcc
     4621 tcaaaaccgg cgaaaccggc gaaaccggcg acgacataga ataccgcatc acccgccgcc
     4681 gcgcccacga acacaccgcc gccctcagca gcaccctttc cgacatgagc agcgaacccg
     4741 caaaattcgc cgacagcctg caacccggct ttaccctgct caaaaccggc tacgccctga
     4801 ccggctacat ctccgccctc ggcgcatacc gcagcgaaat gcacgaagaa tgcagccccg
     4861 actttaccgc acagttccac cttgccgccg aacacaccgc ccacatcttc caacacctgc
     4921 ccgacatggg acccgacgac tttcagacgg cattggatac actgcgcggc gaactcggca
     4981 ccctccgcac ccgcagcagc ggaacacaaa gccacatcct cctccaacag ctccaactca
     5041 tcgcccggca gctcgaaccc tactaccgcg cctaccgaca aattccgcac aggcagcccc
     5101 aaaacgcagc ctgaaaaaat ttcggcattt tgtaaagggg ggcggattgt caggcaggtt
     5161 gcaagatagt ggataaggct ttgcgcaggg taaatgcgta gcaactgaac cgtcattccc
     5221 tcaaaaacag aaaaccaaaa acagaaacct aaaatcccgt cattcccacg aaa
//
LOCUS       DAWXHA010000122         5269 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.122, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000122 DAWXHA010000000
VERSION     DAWXHA010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5269
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.122"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            158..979
                     /locus_tag="AABD07_001842"
     CDS             158..979
                     /locus_tag="AABD07_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HFB2356310.1"
                     /translation="MSSPRQVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATVSGQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYKDKLFGLTIQPERLQAIRQER
                     RPNSAYARIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(1065..1727)
                     /locus_tag="AABD07_001843"
     CDS             complement(1065..1727)
                     /locus_tag="AABD07_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFB2356311.1"
                     /translation="MIQAVLFDLDGTLADTALDLGGALNTQLARHGLPEKSMDEIRTQ
                     ASHGAAGLLKLGANITPEHPDYTAWRTEYLEEYDSRYAQDTTLFDGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLVPKLGFAVPPATVVSGDTCGEPKPSIKPMLHACGKIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYISDEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(1765..2592)
                     /locus_tag="AABD07_001844"
     CDS             complement(1765..2592)
                     /locus_tag="AABD07_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HFB2356312.1"
                     /translation="MKPDIYALPERALLSGDPDEKGRLTDEAFAAVQNADGAEANAPP
                     ADFPRAGRPDTPVLVAPSQLTPRKMNTAEGYAAMLHAITHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLVRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVEQRGDSATCGVLDIIYRDEVGHVAIGNRWYQHLCRE
                     RGLEPVALFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKHAV"
     gene            2975..3598
                     /gene="lolA"
                     /locus_tag="AABD07_001845"
     CDS             2975..3598
                     /gene="lolA"
                     /locus_tag="AABD07_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HFB2356313.1"
                     /translation="MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTLPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVRATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            3871..5007
                     /locus_tag="AABD07_001846"
     CDS             3871..5007
                     /locus_tag="AABD07_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFB2356314.1"
                     /translation="MKKTLVAAILSLALTACGGGSDTAAQTPSAKPEAEQSGKLNIYN
                     WSDYVDPETVAAFEKETGIKMRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQIK
                     AGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKALG
                     TDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKAA
                     VDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVLT
                     PKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELMD
                     EKYTSDASIFPTKELMEKSFIVSPKSAESVKLGVKLWQGLKAGK"
     gene            5102..>5269
                     /locus_tag="AABD07_001847"
     CDS             5102..>5269
                     /locus_tag="AABD07_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFB2356315.1"
                     /translation="MNLSIVVPIYNVESYLEACLNSIEPILSNENVELILVNDGSKDG
                     SEDICYKYIDKI"
BASE COUNT         1229 a         1424 c         1461 g         1155 t
ORIGIN      
        1 taaaaatcct gcgggatcgg tgtggaattt agggataatc tagtacagcc ccttgttttt
       61 tggggtgtaa tccgaggtag gggcggctgg ggtgcttctc ccttgtctgc cgctgctgtt
      121 atgatgatat ttttattctg tatttaagga gggggtgatg agcagtccgc gccaagtgtt
      181 ttatatttcc gaccgcaccg gtctgactgc cgagaatatc ggcgaggctt tgctgaacca
      241 gtttggcaat ctgtcgttca aacgccatac gcatccgttt gtcgatacgc cggaaaaggc
      301 gcgcgcggtg gtggagaagg tcaatcggag ccggcaggaa aacggtcagc gtccgattgc
      361 gtttgtcagt gtggttgatg acgaaatccg ccggattatt aaaggggcgg atgcttttca
      421 gattaatttc tttgagactt ttttgggact gttggagaag gaactcaata ccgaagcaac
      481 ggtatccggg caggggcatc acagtatcgg caatacgaag cgttacgatg cgcgtatgga
      541 ggcggtcaat ttttctttga accatgatga cggggtcagc gataagaacc ttcaggaggc
      601 ggatgtgatt ctgatgggcg tgtcccgttc gggcaaaacg ccgacctgcc tgtatctggc
      661 gttgcaatac ggtatccgtg cggcaaacta tccgctgatt cccgacgatt tggaatcggc
      721 cgatctgccg cgtatggtca agccgtataa agacaaactg ttcgggttga ctatccagcc
      781 ggaacgtttg caggccatcc gtcaggaacg ccgcccgaat tcggcttatg cgcgcatcga
      841 cacctgccgc agcgaagtgg cggacgcgca gagtatgttc agacggcatg gcattccgtt
      901 tgcgaatacg acggacaagt cggttgagga actggcggta cacatccttc aggcgtgcaa
      961 gctcaaacgc aggttttgac gggctttgat tcggtttgaa ggtggaaatg ccgtctgaaa
     1021 tcaggtttca gacggcagtt ttatgtttgt ggggcggata tttttcaggg ctgtattttg
     1081 tccagacatt cgagcagatc gagcggcgtg cggatgtgga aatccgcctg ccatgagccg
     1141 gtatcgtctt catcggaaat atagccccat tcggcgagga cggttttcat accggcgttg
     1201 cgtccggctt ggatgtcgcg ttccgcgtcg ccgacgtaga gggtgtgttg cgggtcggcg
     1261 tggatttttc cgcaggcgtg cagcatgggt ttgatgctgg gtttgggttc gccgcaggtg
     1321 tcgccgctga cgacggtggc gggcggaacg gcgaatccga gtttgggaac gagtttgtcg
     1381 gtgaagcgca tgggtttgtt ggtgatgatg ccccatttga tgccgcgtct gtcgagttcg
     1441 gcgatgagtt cgttcacgcc gtcgaagaga gtggtgtctt gggcgtagcg gctgtcgtat
     1501 tcctccagat attcggtgcg ccatgcggta tagtcggggt gttcgggcgt gatgttcgcg
     1561 ccgagtttga gcaatcctgc cgcgccgtgg ctggcttggg tgcggatttc gtccatgctt
     1621 ttttcgggca gtccgtggcg ggcgagttgg gtgttgagtg cgccgccgag gtctagggcg
     1681 gtgtcggcga gcgtgccgtc gaggtcgaac aatacggctt gtatcatgtg ttttcctttt
     1741 ttataaagtg cgggacgaaa ggtttcagac ggcatgttta ttttgtttca aaccctgctc
     1801 gaaatcttcc aacatatcca attcgaagcg gctgaagccc gctttttccc gcgcttcgat
     1861 gttcacatag ccgcggaaga taaacatatc gtaacgggca atcagactgc ggaacagggc
     1921 gacaggttcc aaaccgcgtt cgcggcagag gtgttgatac caccggttgc cgatggcgac
     1981 gtgtcccact tcgtcgcggt aaatgatgtc caacacgccg caggttgccg aatcgccgcg
     2041 ctgctccacc ttcgcgcgta tccccggcgt aacgtccagt ccgcgcgcct ccaacacgcg
     2101 cggtaccaac gccatacgca acagcgggtc gtaggcggtt ttgtacgcca tatcccacaa
     2161 atggttgtgc gcctcgaaac tgccgtaatc gaagccgaaa gcgcgcaatc tgtcgcgcac
     2221 caggcggaag tggtacacct cctccttcgc cactttcacc cagtcgcgga caaactgaaa
     2281 cggcagcgtg cggaaacggt atgccgcgtc caaagccaga ttgacggcgt tgaactcgat
     2341 atgcgtaatc gcgtgcagca tcgccgcata gccttctgcc gtgttcattt tgcgcggggt
     2401 cagttgcgag ggcgcgacca aaacaggcgt gtccggccgt cccgcgcggg ggaagtccgc
     2461 cggcggcgcg tttgcctccg ccccgtccgc attttgaacg gcggcaaacg cctcatccgt
     2521 cagccgtcct ttttcatcgg ggtcgcccga aagcagggcg cgttccggca aagcataaat
     2581 atcgggtttc atctcaagtc cgccgtgttc ggaaaacgaa tattatagcg tttaaaaaaa
     2641 acaagatgag gcatataatc tccgcgattc ggcattccgc gcccaaaccg tcaaatatag
     2701 tggattaaca aaaaccagta cggcgttgcc ccgccttgcc gtactatgtt gtactgtctg
     2761 cggcttcgtc gccttgtcct gatttttgtt aatccactat aacgcggcac acaattgaaa
     2821 gggcagcgtg gcgcgcctgc tttttccgag cggtcaaaaa aatcagccct cggaaaacgc
     2881 ggtttgcaaa atgcaaaccg cccgtaacgc cgcccgtatg attgttttgc cgcgccgata
     2941 ctttgcgcca cacccatccc gacaaggaaa aataatgatg aaaccgcaca acctgttcca
     3001 attcctcgcc gtttgctccc tgaccgtcgc cgtcgcttcc gcacaggcgg gcgcggtgga
     3061 cgcgctcaag caattcaaca acgatgccga cggtatcagc ggcagcttta cccaaaccgt
     3121 ccaaagcaaa aagaaaaccc aaaccgcgca cggcacgttc aaaatcctgc gcccgggcct
     3181 cttcaaatgg gaatacactt tgccctacaa acagactatt gtcggcgacg gtcaaaccgt
     3241 ttggctctac gatgttgatt tggcacaagt gaccaagtcg tcccaagacc aggccatcgg
     3301 cggcagcccc gccgccatcc tgtcgaacaa aaccgccctc gaaagcagtt acacgctgaa
     3361 agaggacggt tcgtccaacg gcatcgatta tgtgcgggca acgcccaaac gcaacaacgc
     3421 cggctaccaa tacatccgca tcggcttcaa aggcggcaac ctcgccgcca tgcagcttaa
     3481 agacagcttc ggcaaccaaa cctccatcag tttcggcggt ttgaatacca atccccaact
     3541 ctcgcgcggc gcgttcaagt ttaccccgcc caaaggcgtg gacgtgttga gcaactgatg
     3601 ccggccgccc cgatgccgtc tgaacgccgc cgaggcttca gacggcattt tcacgcaggc
     3661 ggaacaatgt cccgcattac cgcccgatcg ggcaacggaa cggcaaatcc gtgaaaatta
     3721 acggttgcgc cccggctgtt tttgccgttt aatgcaaacc ttgctgcacc aagggccaag
     3781 aaagccgacc ggccgccccc acagcttccg atgcaggcgg cccgtccgtc cctgcaatgt
     3841 tttttatttt tgaacgaaag gtcgaaaacc atgaaaaaaa cactggtggc ggcaatcctg
     3901 agccttgcct tgactgcgtg cggcggcgga agcgataccg ccgcccaaac cccctccgcc
     3961 aagcccgaag ccgaacaatc gggcaaactc aacatctaca actggtcgga ttatgtcgat
     4021 cccgaaaccg tcgccgcctt tgaaaaagaa accggcatta agatgcgttc cgactattac
     4081 gacagcaacg aaacactgga ggcaaaagtc ctgaccggca aatccggcta cgacctgacc
     4141 gcgccgtcca tcgccaacgt cggccggcaa atcaaagcgg gcgcgtatca gaaaatcgac
     4201 aaggcgcaaa tcccccatta cggcaacatc gataaagatt tgctgaaaat gatggaagcc
     4261 gtcgatccgg gcaacgaata cgccgtcccc tatttctggg gcatcaacac cttggcaatc
     4321 aacacgcggc aggtgcaaaa ggcattgggt acggacaagc tgcccgaaaa cgagtgggat
     4381 ttggtgttca aacccgaata caccgccaaa ctcaaatcct gcggcatcag ctatttcgac
     4441 agcgcaatcg aacagattcc cttggcgttg cactatttgg gcaaagaccc caacagtgaa
     4501 aatcccgaag acatcaaagc cgccgtcgat atgatgaaag ccgtccgagg cgacgtgaaa
     4561 cgcttcagct cttccggcta tatcgacgat atggcggcgg gcaacctgtg tgccgccatc
     4621 ggttacggcg gcgatttgaa cattgccaaa acccgtgccg aagaagccgc aaacggcgtg
     4681 gaaatcaaag tattgacccc gaaaaccggc gtaggcgtgt gggtggattc ctttatgatt
     4741 ccgcgcgacg cgcaaaacgt tgccaacgcc caccgctata tcgactacac gctccggccc
     4801 gaggtggctg cgaaaaacgg cagcttcgtt acctacgcgc ccgccagccg tcccgcgcgc
     4861 gagctgatgg atgaaaaata cacctccgac gcatcgattt tcccgaccaa agaactgatg
     4921 gaaaaaagtt tcatcgtatc acccaaatcc gcagaatccg tcaaactggg cgtgaagctg
     4981 tggcaagggc tcaaagcggg caaataaccg gaatccctgc cgtctgaaac ctttcgggcg
     5041 gcaggaaacg gcgtgtccgc attaagtcag gattaggatt atttagaaag atgagatgga
     5101 tatgaattta agtattgtcg ttcctattta taatgtcgaa agttatttgg aagcgtgttt
     5161 aaattctata gaacctatat taagtaatga aaatgtcgaa cttattcttg tgaatgacgg
     5221 gtcaaaagac ggaagtgaag atatatgtta taaatatata gataaaata
//
LOCUS       DAWXHA010000123         5253 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.123, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000123 DAWXHA010000000
VERSION     DAWXHA010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5253
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.123"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(217..2961)
                     /gene="tbpA"
                     /locus_tag="AABD07_001848"
     CDS             complement(217..2961)
                     /gene="tbpA"
                     /locus_tag="AABD07_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent transferrin-binding protein TbpA"
                     /protein_id="HFB2356316.1"
                     /translation="MQQQHLFRFNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIRTGRHAGEIRAHEAAGRGVQSFNRLAPVDDSSDYAHFIVEGECKNGGYETCKTRP
                     KKDVAGEDKRQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILERT
                     QQTFDTRDMTVPAFLTKAVFDENKKYGLIRGYGKYAGDHRYGGLITNSENGAQVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPSSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGYDRFGSD
                     LRHQDYYYQHANRAYSPKTPPQNGDKKTIPNGGKDKPYWVSIGGGNVVTGQICLFGNN
                     TYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTLS
                     WNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRSGDKIKAVKIDPEKSFNKEAGIV
                     FKGDFGNLEASWFNNAYRDLIVRGYEVQIKDGKEQVKGDPAYLNAQSARITGINILGK
                     IDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGSGYDQ
                     PEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRDTKATARRTRPWYIVDVSGYYTVK
                     KHFTLRAGVYNLLNHRYVTWENVRQTAAGAVNQHKNVGVYNRYAAPGRNYTFSLEMKF
                     "
     gene            complement(3048..5129)
                     /locus_tag="AABD07_001849"
     CDS             complement(3048..5129)
                     /locus_tag="AABD07_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFB2356317.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVPSKKPEARKDQGGYGFAMRFKRRNWYPPSNPKENEIRLSEGDWEQTDDGEIKTPS
                     KQKNIINALSGNGGASLQDSSQQGEGISKVTDHHDFKYVWSGFFYKQIGNTVKKSGLS
                     IEARNGPDGYIFYKGKDPSRELPVLGSVEYKGTWDFLTDVKANQKFTGLGNTSTKSGD
                     RYSAFSGELDYIVKKESDKKDGHVGFGLTTEITVDFGKKNLSGKLIKNNMVINNGDEP
                     TTQYYTFDATLRGNRFSGKATATDKKENETGQHPFVSDSSSLSGGFFGPQGEELVFRF
                     LSDDGKVAVVGSAKTKDNTANGNPAVSSGAGAAAMPSETGLTTVLDAVELTLDGKEIK
                     NLDNFSDATRLVVDGIMIPLLSTESGDGQADKGKNGGTDFTYTTTYTTTYTPESDKKD
                     TKAQTGAVGMQTAPGAAGVNGGQAGTKTYEVEACCSNLNYLKYGMLTRKNSESAMQAG
                     KNSSQADAKTKQIEQSMFLQGERTDEKEIPKDENVVYLGTWYGHIATNGTSWTREASN
                     QENGNRAKFDVNFKDKRITGTLTAENRSEATFTIDAMIDGNGFKGMAKTGNGGFAPDQ
                     NSSTGTHKVHITSAAVQGGFYGPKAEELGGWFAYPGNGQTKNAQASSGNGNSAGSATV
                     VFGAKRQELVK"
BASE COUNT         1082 a         1360 c         1327 g         1484 t
ORIGIN      
        1 atctgaatcg tcattcccac gaaagtggga atctagaaac cccaacgcag cgagaatcta
       61 tcggagaaac cgaaacccga cagacccgga tgcacgcctg cgcgggaatg acgggtttcg
      121 ggattacggt attgtcggga gggatgggga acggtgaaat ttgtgtaaaa aatgccgtct
      181 gaagcctttc agacggcatt tgcggcgagg gggcatttag aacttcattt ccaagctaaa
      241 tgtgtagttg cggccggggg cggcatatcg gttgtaaacg ccgacatttt tgtgttggtt
      301 gactgcgccg gcggcagttt gccgcacatt ttcccaagta acatagcggt ggttgaggag
      361 gttgtacacg cccgcacgga gggtgaagtg ttttttaacc gtgtaataac cggacacatc
      421 cacaatatac caagggcggg tacggcgcgc ggtggctttt gtatcgcggc tgttgccgtt
      481 gagcaaagcc cggctgccca acaactctgt gatttccttg gctttggaat aagtcagcat
      541 accgttcaca ccccatttgc cttccggttg gtcatagccc gagccgacga catagcgcga
      601 gggttggatg gcatcaaaca ggtgtgattg gatatcggtg cggtctgcgc gttttttaat
      661 atcgcggaca cggacacgat tataggcaaa tgtggaatac caaccttcgg gcaatttatc
      721 ccatacgccg ttccaatcga ttttgcccaa aatattgatg ccggtaatcc gcgcgctttg
      781 ggcattgagg taagccgggt cgcctttgac ttgttctttg ccgtctttaa tttgcacttc
      841 ataaccccgg acaatcaaat cgcggtaggc attgttgaac caacttgcct ccaagttgcc
      901 gaaatcgcct ttaaacacga tgccggcttc tttgttgaac gatttttccg gatcgatttt
      961 gacggctttt attttatcgc ccgaccgcca gccgtacatt tccgcaaacg agggcaggcg
     1021 gaagccggtt gaggtgcggt aagtcaaatc cagccagtcg gcaggtttga ggacgatgcc
     1081 ggcgttccag gacagggtgc ggtgcgtgcc ggtggaaacg ctgccgtcgt ccgaatgcgt
     1141 gctgcggtag tcgtagcgca agcccgcgcc gacatccgcc cacctgccca aacggacgtt
     1201 gtcccggacc gccgcgtaat agcttttgcc gttgatgctg cgcggcgtgc agtccgtata
     1261 agtattgttg ccaaagaggc agatttgccc cgtaaccaca tttcccccgc ctatgctgac
     1321 ccaatagggc ttgtccttgc cgccgttggg gatggttttt ttatcgccgt tttgaggggg
     1381 cgttttcggc gaataggcgc ggttggcatg ttgataataa taatcctgat ggcggaggtc
     1441 ggaaccaaaa cggtcgtaac cgaggttgac gctcaggttg tggcggattt tggcggtatc
     1501 gaaggatttt ttgaatgccg cctgcaagag cctgtggctt tccccgtaaa tcacgcggtc
     1561 ggatttgtag taggaagacg gcttgtcggc actcgggcgg caatatttgt ccgaaccgtc
     1621 ggcggaacag tgcgtctgct gaaaatgatt gtccaaaccg atgccctgac ggtcgtaaga
     1681 gaggcgggca taatccgccc aagtgtcttt atcggcattg gtatagacat attccaaacc
     1741 gtagcggctt ttggtgtgcg tctcgtcgta aaacacgccc gtaccgtatt ccgcgcccac
     1801 ctgcgcaccg ttttcactgt tggtaatcag cccgccgtat cggtggtcgc ccgcgtattt
     1861 gccgtagcct cttatcaatc cgtatttttt attttcatca aaaaccgcct tggtcaggaa
     1921 tgccggaacc gtcatatcgc gcgtgtcgaa agtttgctgc gtgcgttcga gtatgccgcc
     1981 gatgtagtgc cgcttattct caaaacgaaa acccgggcgg aacagccacg accggctttc
     2041 gtatgaaagc ggatcggcaa ggaagcggtt ggggcccgtg tagtctcggg tggaaaccgt
     2101 ttgacgtttg tcttcgccgg caacatcttt tttcggtctc gttttacacg tttcataacc
     2161 cccgtttttg cattctcctt caacgatgaa atgggcgtag tcgctgctgt catcaaccgg
     2221 cgccagcctg ttgaagctct gaacgccgcg tccggcggct tcgtgggcgc ggatttcccc
     2281 cgcgtgccgg ccggtgcgga tcagcaaagc ctccgcaccg ccgatgcgcc ccgccagcgc
     2341 gatggattgg gtaagccccc ggtttttgcc ggaataggcg gttttactct gaatgcccca
     2401 ctgcctgcct tccccgataa catcgtcggc ggttttggtt tgaaatgcga ccgagcccgc
     2461 caatgcgccg ctgccttgtt cgaccgagtt tgagcctttg ctgatttcga cagccttgac
     2521 gttctcatac tcgatttcat tgattgcgcc gctgctgccc gccgtcctcg tcccgcccaa
     2581 tgccgcctgc gcggtgtagg actgtatttg cgccaagccg tccaccgtca aggagacgcg
     2641 gtttttgtcc ataccgcgta tcgagtagcc cgagcttgcg ccgcgcccct gttcgacgac
     2701 ggcgatgccg gggtcgtaac gcgtcaggtc gcggatgtcg agtacctgtt ctttgctgag
     2761 ggtgtcggcg gttttgacca atttgcccaa accggttact tcgttatcgc ggcgggtttt
     2821 ctgttttttg gcttttacct gtatggtatc caactgtttt tcctgtgctt gtccggcttg
     2881 cacattttct gcataagcgg gcagcgcagt cattaaagac aggcataaaa tattgaatcg
     2941 gaacaaatgt tgctgttgca tagtgtttcc ctaatcttcg ctttcagacg gaatcggcag
     3001 gaacgatgcc gtctgaagcc ttattctcga ttgttcggca gccgtgctta tttcacaagc
     3061 tcttggcgtt tcgcaccgaa taccacggtc gcgctgcctg ctgaatttcc attgccggat
     3121 gaagcttgcg catttttcgt ttgtccattg cccggatagg caaaccatcc gcccaactct
     3181 tcggctttag gcccgtaaaa accgccctgc accgcggcac ttgtgatgtg cactttatgt
     3241 gtaccggtgc tgctgttttg atccggcgca aagccgccat taccggtttt cgccatacct
     3301 ttaaagccgt tgccatcaat catggcgtca atggtaaagg ttgcctccga cctgttttca
     3361 gcggttaacg tgccggtaat tcttttgtct ttgaaattca cgtcaaactt tgcccgatta
     3421 ccattttcct gattggaggc ttcgcgggtc caacttgtgc cgttggtggc aatatgcccg
     3481 taccaagtgc ctagataaac gacgttttcg tcttttggaa tttctttttc atcggtgcgc
     3541 tcgccttgga ggaacatact ttgttcaatt tgtttcgttt tagcatcagc ttgactactg
     3601 tttttgcctg cctgcatcgc ggattcgctg tttttacgtg tcaacattcc gtatttcaga
     3661 taattgaggt tggaacagca ggcttcgact tcataggttt ttgttcctgc ctgcccgccg
     3721 ttaacgcccg ccgcacccgg agcggtttgc atgccgaccg cgcctgtttg ggctttggtg
     3781 tcttttttat cactttccgg cgtgtaggtt gttgtgtagg ttgttgtgta ggtaaagtct
     3841 gttccaccgt ttttaccttt atctgcctga ccgtccccgc tttcggtgga caggagcgga
     3901 atcataatgc cgtcgacaac cagtcgggta gcgtcgctga agttgtcgag atttttgatt
     3961 tccttgccgt ctagtgtcaa ttcaaccgca tccaaaaccg tggtcagccc ggtttcagac
     4021 ggcatagctg ccgcacctgc gccgcttgaa accgccggat tgccatttgc ggtgttgtct
     4081 ttggttttcg cgctgccgac aacggcaact tttccatcgt cgctcaaaaa gcggaaaacc
     4141 aattcctcac cctgcgggcc gaaaaagccg ccgctcagag aagacgagtc ggaaacaaag
     4201 ggatgttgtc cggtttcatt ctcttttttg tcagttgccg tcgccttgcc gctgaagcgg
     4261 tttcccctaa gcgtcgcatc gaaggtgtag tattgggtgg tgggttcatc gccattattg
     4321 attaccatgt tgtttttaat taattttccg ctcaggtttt ttttcccaaa atcaaccgtt
     4381 atttccgttg ttaatccgaa acctacgtgc ccgtcttttt tatcactctc ttttttgact
     4441 atataatcca actccccgga aaaagcacta tatcggtctc cggatttcgt agaagtattt
     4501 cctaaacctg taaatttctg atttgctttc acatcagtta aaaaatccca agtacctttg
     4561 tactcaacac tccctaaaac aggaagttct ctcgaaggat ctttgccttt ataaaaaata
     4621 taaccgtcag gaccgtttct ggcttcgata gataaaccgc tttttttaac tgtattccca
     4681 atctgtttat aaaaaaaacc cgaccatacg tatttaaaat cgtgatggtc cgtaacctta
     4741 gatataccct caccttgttg actggaatct tgcaatgatg cgcccccatt tccagataag
     4801 gcattaataa tatttttttg tttggaaggg gttttgatct caccatcatc cgtttgttcc
     4861 caatcacctt cagagagtct tatctcattt tctttaggat ttgacggcgg ataccaattg
     4921 cgccgcttga agcgcatcgc gaaaccgtat ccgccttggt cttttcgggc ttccggtttt
     4981 ttggaaggaa catcttgata ctttggcgcg ggacgcgggg cttcggtatc gacagaatca
     5041 agatcgaaac tgccgcctcc gcccagacaa gcgctcaaca aaaacacggg cagcaccata
     5101 gcagcctgat tcaccaatgg attgttcata acaaacccga ttcaattaaa gaatgataag
     5161 gattattatt ttatttattt ttaaaaaatt tgcaaatgct tttttatatt tttagtaaat
     5221 aaaccaaaat accgtcattc ccgcgctgct ttt
//
LOCUS       DAWXHA010000124         5226 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.124, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000124 DAWXHA010000000
VERSION     DAWXHA010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5226
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.124"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            114..608
                     /locus_tag="AABD07_001850"
     CDS             114..608
                     /locus_tag="AABD07_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell filamentation protein Fic"
                     /protein_id="HFB2356318.1"
                     /translation="MQPITGNFDLAHLQTIHRELFGNVYDWAGKIRRVDISKGNTRFA
                     NFAFIENESRKLLEKLKNENYLRVLDKDKFAERAAYYLDELNVLHPFREGNGRTLRLF
                     MTQLAIKNGFQIHWQNISAEQMIQACIQAYHADSSLLARLIIRQFRTIVFFRRLKHQQ
                     TTIF"
     gene            621..1007
                     /gene="iscU"
                     /locus_tag="AABD07_001851"
     CDS             621..1007
                     /gene="iscU"
                     /locus_tag="AABD07_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HFB2356319.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            1094..1414
                     /gene="iscA"
                     /locus_tag="AABD07_001852"
     CDS             1094..1414
                     /gene="iscA"
                     /locus_tag="AABD07_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HFB2356320.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEANGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEDLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(1374..1595)
                     /locus_tag="AABD07_001853"
     CDS             complement(1374..1595)
                     /locus_tag="AABD07_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HFB2356321.1"
                     /translation="MGGKAQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKRRDGFDTVPPFLCLKRGSSRRSRRSL"
     gene            1677..2177
                     /gene="hscB"
                     /locus_tag="AABD07_001854"
     CDS             1677..2177
                     /gene="hscB"
                     /locus_tag="AABD07_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HFB2356322.1"
                     /translation="MSQYFTLFRIEPAFDIGTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTSFAPDFLMQQMEWRET
                     LMEARAGNNLESLKNLDNEIRAEQEKLFCGLKQSFARQDCDTAAQQVRQGRFLDKLRH
                     EISSAL"
     gene            2275..5025
                     /gene="gyrA"
                     /locus_tag="AABD07_001855"
     CDS             2275..5025
                     /gene="gyrA"
                     /locus_tag="AABD07_001855"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HFB2356323.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDFAVYGTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLTDTINACLRLLDEPKTEIDELID
                     IIQAPDFPTGATIYGLGGVREGYKTGRGRVVMRGKTHIEPIGKNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKKQGYYLSEIQADAILRMSLRNLTGLDQKEIIESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     DLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSGASVISNVTEPEA
                     EN"
BASE COUNT         1470 a         1451 c         1226 g         1079 t
ORIGIN      
        1 cgtaatctat atgaatgatg gtgtatttag aaataaatta gccattcaag atccacttaa
       61 atttaaaaaa ggtcgaaaga gacatttctg ctatttccgc ccaaaatctg cttttgcaac
      121 ccattacagg caatttcgat ttggcgcatt tacagaccat tcatcgcgaa ctgtttggca
      181 atgtttatga ttgggcagga aaaatccgga gggttgatat ttctaaaggt aatacccgat
      241 ttgccaattt tgcttttatc gaaaacgaaa gccgtaaact tttggagaag ctgaaaaacg
      301 aaaactattt gcgggtgttg gataaagata aattcgccga gcgtgcagcc tattatttgg
      361 acgagttgaa cgtcctacat ccttttcgtg aaggaaacgg cagaacattg cgcctgttta
      421 tgacacaatt ggcaataaaa aacggttttc agatacattg gcaaaatatc tctgccgaac
      481 aaatgattca agcctgtatt caggcatacc atgccgatag cagcttattg gcacgcctaa
      541 ttattagaca atttagaaca atcgtctttt tcagacgact aaaacatcaa caaaccacga
      601 tattttaagg aaaccacatc atggcataca gcgataaagt aatcgaccac tacgaaaatc
      661 cccgcaacgt cggcactttc gacaaaaacg acgagtccgt cggcaccggc atggtcggcg
      721 cgcccgcctg cggcgacgtg atgcgcctgc aaatcaaagt gaacgatgaa ggcatcatcg
      781 aagatgcgaa attcaaaact tacggctgcg gttccgccat cgcttcgtcc agcctgatta
      841 ccgagtgggt caaaggcaaa agtctggatg acgcgctggc aatcaaaaac agcgaaatcg
      901 ccgaagaact ggaattgccg ccggtaaaaa tccactgctc catcttggct gaagatgcgg
      961 taaaagcggc cgttgccgac taccgcaaac gtcaggaaaa cagataaagc ccttcagacg
     1021 gcatcgtccc acaatgccgt ccgaaccacc cgccgcttcg gatccgtccg gggcggtaca
     1081 acaaggaaga aatatgatta cccttaccga gaatgccgca aaacacatca atgactatct
     1141 cgccaaacgc ggcaaaggct tgggcgtacg cttgggtgta aaaaccagcg gctgctcggg
     1201 gatggcgtac aaccttgaat ttgtcgatga agccaacggc gacgacctga ttttcgaagg
     1261 acacggcgcg cgcatttata tcgacccgaa aagcttggtt tatctggacg gcacacaagt
     1321 cgattacacc aaagaagatt tgcaggaagg tttcaaattt gaaaacccca atgtcaaaga
     1381 ctcctgcggc tgcggcgaga gcttccacgt ttaaggcata aaaacggcgg gacagtatca
     1441 aaaccgtccc gccgtttttt cgcttcctgc ctgttatagc tgcctttgcc tttccttttc
     1501 cgttccacct tgtgccggaa caaatcggat tttactaagg cttttaaagc attgtcgcgt
     1561 attttgcctt tattgtgctg cgctttgccg cccatattca gtcctttcgt ttaagaagcc
     1621 gcagattata aggcaaaaac agttttctgc caaaatctta catttatcat cctactatgt
     1681 cccaatattt caccctcttc cggattgaac ccgctttcga tatcggcacc gaaaacttgg
     1741 aacaaaccta ccgcgccttg gccgcccgtt tccatcccga caaattcgct tccgcttccg
     1801 ctttcgagca gaaacaggcg gttatgatgt cttccaccat caacgatgcc taccgcacct
     1861 tgaaaaatcc catcgaccgc gccgcgtacc tgctgaaaac atcgggtatc gatgccgatg
     1921 cgccggaaca tacctctttc gcccccgact tcctcatgca gcaaatggaa tggcgcgaaa
     1981 cgctgatgga ggcacgggca ggcaacaacc ttgaatcctt gaaaaatctc gataacgaaa
     2041 tccgcgccga acaagaaaaa ctgttctgcg gtctgaaaca gtcattcgcg cgccaagact
     2101 gcgacaccgc cgcacaacaa gtccgccaag gcaggtttct cgacaaactc cgccacgaaa
     2161 tttcctccgc attataatcc gcaccgtgtt tcagacggca taaccgccgc accgtttcat
     2221 gtcgaaatat gctaaaataa gcaacaattt tttgccatac gaaacattga aaccatgacc
     2281 gacgcaacca tccgccacga ccacaaattc gccctcgaaa ccctgcccgt cagccttgaa
     2341 gacgaaatgc gcaaaagcta tctcgactac gccatgagcg tcattgtcgg gcgcgcgctg
     2401 ccggacgttc gcgacggcct aaagccggtg caccggcgcg tactgtacgc gatgcacgag
     2461 ctgaaaaata actggaatgc cgcctacaaa aaatcggcgc gcatcgtcgg cgacgtcatc
     2521 ggtaaatacc acccccacgg cgatttcgca gtttacggca ccatcgtccg tatggcgcaa
     2581 aatttcgcta tgcgttatgt gctgatagac ggacagggca acttcggatc ggtggacggg
     2641 cttgccgccg cagccatgcg ctataccgaa atccgcatgg cgaaaatctc acatgaaatg
     2701 ctggcagaca ttgaggaaga aaccgttaat ttcggcccga actacgacgg tagcgaacac
     2761 gagccgcttg tactgccgac ccgtttcccc acactgctcg tcaacggctc gtccggtatc
     2821 gccgtcggta tggcgaccaa catcccgccg cacaacctca ccgacaccat caacgcctgt
     2881 ctgcgtcttt tggacgaacc caaaaccgaa atcgacgaac tgatcgacat tatccaagcc
     2941 cccgacttcc cgaccggggc aaccatctac ggcttgggcg gcgtgcgcga aggctataaa
     3001 acaggccgcg gccgcgtcgt tatgcgcggt aagacccata tcgaacccat aggcaaaaac
     3061 ggcgaacgcg aagccatcgt tatcgacgaa atcccctatc aggtcaacaa agccaagttg
     3121 gtcgagaaaa tcggcgattt ggttcgggaa aaaacactgg aaggcatttc cgagctccgc
     3181 gacgaatccg acaaatccgg tatgcgcgtc gttatcgagc tgaaacgcaa cgaaaatgcc
     3241 gaagtcgtct taaaccaact ctacaaactg actccgctgc aagacagttt cggcatcaat
     3301 atggtggttt tggtcgacgg acaaccgcgc ctgttaaacc tgaaacagat tctctccgaa
     3361 ttcctgcgcc accgccgcga agtcgttacc cgacgtacgc ttttccggct gaagaaggca
     3421 cgccatgaag ggcatatcgc cgaaggcaaa gccgtcgcac tgtccaatat cgatgaaatc
     3481 atcaagctca tcaaagaatc gcccaacgcg gccgaggcca aagaaaaact gcttgcgcgc
     3541 ccttggcgca gcagcctcgt tgaagaaatg ctgacgcgtt ccggtctgga tttggaaatg
     3601 atgcgtccgg aaggattggc tgcaaacatt ggtctgaaaa aacaaggtta ttacctgagc
     3661 gagattcagg cagatgctat tttacgcatg agcctgcgaa acctgaccgg cctcgatcag
     3721 aaagaaatta tcgaaagcta caaaaacctg atgggtaaaa tcatcgactt tgtggatatc
     3781 ctctccaaac ccgaacgcat tacccaaatc atccgtgacg aactggaaga aatcaaaacc
     3841 aactatggcg acgaacgccg cagcgaaatc aacccgttcg gcggcgacat tgccgatgaa
     3901 gacctgattc cgcaacgcga aatggtcgtg accctgaccc acggcggcta tataaaaacc
     3961 cagccgacca ccgactatca ggctcagcgt cgcggcgggc gcggcaaaca ggcggctgcc
     4021 accaaagacg aagactttat cgaaaccctg tttgttgcca acacgcatga ctatttgatg
     4081 tgttttacca acctcggcaa gtgccactgg attaaggttt acaaactgcc cgaaggcgga
     4141 cgcaacagcc gcggccgtcc gattaacaac gtcatccagc tggaagaagg cgaaaaagtc
     4201 agcgcgattc tggcagtacg cgagtttccc gaagaccaat acgtcttctt cgccaccgcg
     4261 cagggaatgg tgaaaaaagt ccaactttcc gcctttaaaa acgtccgcgc ccaaggcatt
     4321 aaagccatcg cactcaaaga aggcgactac ctcgtcggcg ctgcgcaaac aggcggtgcg
     4381 gacgacatta tgttgttctc caacttgggc aaagccatcc gcttcaacga atactgggaa
     4441 aaatccggca acgacgaagc ggaagatgcc gacatcgaaa ccgagatttc agacgacctc
     4501 gaagacgaaa ccgccgacaa cgaaaacacc ctgccaagcg gcaaaaacgg cgtgcgtccg
     4561 tccggtcgcg gcagcggcgg tttgcgcggt atgcgcctgc ctgccgacgg caaaatcgtc
     4621 agcctgatta ccttcgcccc tgaaaccgaa gaaagcggtt tgcaagtttt aaccgccacc
     4681 gccaacggat acggaaaacg caccccgatt gccgattaca gccgcaaaaa caaaggcggg
     4741 caaggcagta ttgccattaa caccggcgag cgcaacggcg atttggtcgc cgcaaccttg
     4801 gtcggcgaaa ccgacgattt gatgctgatt accagcggcg gcgtgcttat ccgtaccaaa
     4861 gtcgaacaaa tccgcgaaac cggccgcgcc gcagcaggcg tgaaactgat taacttggac
     4921 gaaggcgaaa ccttggtatc gctggaacgt gttgccgaag acgaatccga actctccggc
     4981 gcttctgtaa tttccaatgt aaccgaaccg gaagccgaga actgaaaatc atctcccgat
     5041 gccgtctgaa gattcagacg gcatttattt ttccctcatc cgtcatccag cttctcacaa
     5101 tatagcggat taacaaaaat caggataagg cgacgaagcc gcagacagta caaatatagt
     5161 ggattaaatt taaactagta cagcgttgcc tcgccttgcc gtactatagt caattaaaaa
     5221 caaggg
//
LOCUS       DAWXHA010000125         5128 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.125, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000125 DAWXHA010000000
VERSION     DAWXHA010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5128
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.125"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..3215)
                     /locus_tag="AABD07_001856"
     CDS             complement(<1..3215)
                     /locus_tag="AABD07_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HFB2356324.1"
                     /translation="MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKL
                     GEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHER
                     FTDKQSDFLTYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQT
                     AIEMGLTTKEAAFRRPPEVKQLTSSENAGDQDLSAKLKQKQLDKKQHRTQIRATKEAG
                     YEQIHRALLTGLIANVGMKSPDSNDYTGARGSRFHLFPASALFKAKPKWVMAAELVET
                     TRLYARDVAVIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLAVLPRRP
                     VSYGKVAPEEAREIFIRSALVAQEYDLKADFFVHNKKLIKEITELEHKSRKQDVLVDD
                     EALFAFYHERLPDFYMADSVSEGLCPANPQQTTPSPVGEGWGEGKTVAAQTNFSATSA
                     SPLPNPLPQEREQSASVSTVSGSLKTMSCEARLNFCEAKTKTESSLHSQRLSENYTPP
                     FSDGLRPANPQQTTPSPVGEGWGEGKTVAAQTNFSATAANPLPQEREQSASALTVSDD
                     PKPKKQPASQKGRLKPLPLADIRTFEAWLKTAERDNPRLLFLSRDDLMQHAAAHITEE
                     QFPKHWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMIREKIQ
                     LQIKALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRILEQINQ
                     DEWAAFRLPEHCYFNLRIIDDGGQELAMGRDLIQIQQQLGKAATTTFRDNTQEFERDN
                     VTAWDIGILPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSAAAGHAHRLGVIEL
                     MKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDKLPRNEK
                     SFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAPG
                     FATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKTDGLAKQ
                     GQPVSDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKM"
     gene            complement(3281..4858)
                     /gene="lpt3"
                     /locus_tag="AABD07_001857"
     CDS             complement(3281..4858)
                     /gene="lpt3"
                     /locus_tag="AABD07_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     yransferase"
                     /protein_id="HFB2356325.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKATRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPALWGVAEVVLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQPAPSKIGQGSIQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTRLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIADK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYIVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRNGKAEYVYPQ"
BASE COUNT         1017 a         1202 c         1541 g         1368 t
ORIGIN      
        1 cacatcttca acagccgctt taccgacacc ggatacggcg tcttcaactc ctgcgcgaac
       61 agcgacactc tcaattcttc aatcatccat ttaaacgcgg cgaggccgtc tgaaacgggc
      121 tgtccttgtt tcgccaagcc gtcagttttt tcctgccaca tttgttccag ctcttggata
      181 tcggcttcgc gggctgcgtc gcgggcgggg ttgctgctgt atttttcgag gcgcagggtc
      241 atggctttga ggtagatggg gaggcgcggc cattgtgccc acggggtgcg ggtggcgaag
      301 ccgggtgcaa gcagggtttg caggcgtagt cttaggaggt gggtcaatgg gtgtttgccg
      361 agtttgccgt tcagttcggc gtaggcggct gcggtttcct gcaggtagcg gctgagggct
      421 tctttgacgg cgggcaggcg gctgcgggcg cgtttgattt gttctttgaa ggatttttcg
      481 ttgcgcggca gcttgtcttc gccgataaag gcgcggtcgc agacggcttg ggtgaggtcg
      541 tcgcgcaggg tgtcggcgtt gatgtgtttg agcagcatgg cggcttgggt gaagccttgg
      601 atgcctttgt tcagatcttt aacttgttct tttagttgta gtttcatgag ttcaatcacg
      661 cctaatctgt gggcgtgtcc ggcggcggca gacgtgtcga acaggcgcag ggcgatgcgg
      721 ccgtcttttt ctttttgcag gccgaggtag ccggtgagct gttgtttgcc gcgggcgaat
      781 ttgatggatt cgggcaggat gccgatgtcc catgcggtaa cgttgtcacg ctcgaattct
      841 tgggtgttgt cgcggaaggt ggtggtggcg gctttgccaa gttgttgttg gatttggatt
      901 aaatcgcgac ccatggctaa ctcttgtccg ccgtcgtcga tgatgcggag gttgaaatag
      961 cagtgttcgg gcagcctgaa cgcggcccat tcgtcttggt tgatttgctc gagtatgcgg
     1021 atgtcgcctg cggttttggc gatggcttgg gcgagctggg gcaggatggg ggcgttgcgg
     1081 tcggggtttt ggcttaaaaa ttgggtgatg aattcgggta cgggtacgca gatgcggcgg
     1141 atttgtttgg gcagtgcttt gatttgtagc tggatttttt cgcgtatcat gccgggcacg
     1201 agccattcga gggcggcggg gctgatgcgg ttgagcacgg tgagcggcag ggtgagggta
     1261 acgccgtcga gcgggtggtg cggctcgaag cggtagctga gtttgaattt gccgtctgcg
     1321 gtctgccagt gtttggggaa ttgttcttcg gtgatgtgcg cggcggcgtg ctgcatgagg
     1381 tcgtcgcggc tgaggaacaa caggcgcggg ttgtcgcgct cggcggtttt gagccaggct
     1441 tcaaaggtgc ggatatcggc aaggggcaaa ggtttcagac ggcctttttg agatgcaggc
     1501 tgctttttgg gtttggggtc atctgaaact gttaaagccg aggcactctg ttccctctcc
     1561 tgtgggagag ggtttgctgc ggttgcggaa aagttggttt gtgcggcaac tgttttgccc
     1621 tctccccagc cctcccccac gggggagggg gtggtttgct gggggtttgc aggacgcagg
     1681 ccgtctgaaa atggcggggt gtagttttca gatagccttt gggagtgcag gctgctttcg
     1741 gttttagttt tagcttcgca gaaattcagc cttgcttcgc aagacattgt tttcagactg
     1801 cctgaaaccg ttgaaactga ggcactctgt tccctctcct gtgggagagg gttagggaga
     1861 gggcttgctg aggttgcgga aaagttggtt tgtgcggcaa ctgttttgcc ctctccccag
     1921 ccttccccca cgggggaggg ggtggtttgc tgcggatttg caggacacag gccctctgaa
     1981 accgaatccg ccatataaaa atcgggcagc cgttcgtgat aaaacgcaaa cagggcttcg
     2041 tcatcgacca atacgtcttg cttgcgcgat ttgtgttcga gttcggtaat ttctttaatc
     2101 agctttttgt tgtggacaaa aaaatccgct ttcaaatcgt attcctgcgc caccaacgcg
     2161 ctgcggataa agatttcacg tgcttcttcg ggcgcaactt taccgtaaga cacggggcgg
     2221 cgcggcaata cggccaggcc gtaaagcgtt acgcgttcgc tggcgacgac ttcgccgcgt
     2281 ttttgttccc agtgcggctc gaaataatgg tagcggacaa ggtgcggggc ttcctgctcg
     2341 atccattcgg gctggataac ggcgacgtcg cgcgcgtaaa ggcgcgtggt ttcaaccaat
     2401 tctgccgcca tcacccattt gggcttggct ttgaacaggg cggaggcggg gaaaaggtgg
     2461 aagcggctgc cgcgcgcgcc ggtgtagtcg ttgctgtcgg gcgatttcat gccgacgttg
     2521 gcgatgaggc cggtgagcag ggcgcggtgg atttgttcgt agcccgcttc tttggtagcg
     2581 cggatttggg tgcggtgttg tttcttatcc agttgttttt gtttgagttt ggcagatagg
     2641 tcttggtcgc ccgcattctc agacgacgtc agttgcttga cttcgggagg tcgtctaaac
     2701 gcagcttctt tggtggtcaa gcccatttca atcgcggttt gggcaagctg gtggtgcagc
     2761 tcgcgccact cgcgcatcct caggtgcgac agaaaatatt gacggcacca ttgcaccaac
     2821 tgcttgttgg acaaaccttt gtcgcgctcg cgctggaaac tgtcccaaat attcaggtag
     2881 gtaaggaaat cggattgctt gtcggtaaag cgttcatgcg ccttggccgc ggcatcgcgc
     2941 gcttccagcg gccgttcgcg cgggtcttga atcgacagcg cagacgcaat caccaatatt
     3001 tccgccatgc agtcgtgttt cttcgccgcc agcaaaatgc gcgcaatttt cggatcgatg
     3061 ggcaggcgcg ccatttgttc gccgagcttg gtcaggcggt agcgcgtgtt ggtaccgata
     3121 tggcccgaac tgttttgcag gccgtctgaa acattggccg ggttggatcg ggcatccatg
     3181 cctgatccgc gtacttggtt tttcatattt tgcatagtct tgtcggtcgg gcatcttccc
     3241 cgacatcatc taaatttgtc tttattggtt ttcacgctgc ttattgcgga taaacatatt
     3301 ccgccttgcc gttgcgaatg ttcaagctgc ctgcatcgcc cgtaatcagg ttgcctgtta
     3361 ccgagccttc gcgacaacct gaaaccggca tatcgtagcc caacgtgtga atcaggaacg
     3421 ttgaaagctg ctgatggaag gcaatctcgc aaggcgcaaa agcctggttg gcagcctgtt
     3481 gcacggcctt atccgggctg tacaaaacca gaggcacaat atagctgtcg ggctgcaccg
     3541 tgccttgatt gtagatatct tggcgcacat actggccatg atcggaggta taggcaaaca
     3601 gccagttgcc gtcaggctgc ttttgcagct gctcgaatac ggtttgaatc atttggtcgg
     3661 ttttgtggat ggtgttgtcg tacttatccg caatatcggc ttcgccgaat actttatctt
     3721 gaggctgcaa caatgcgccg tatggggcgt gcgaaccgcg ttggtgcaac acgataaaat
     3781 gcctgccctg ctgcaaattg attttgtcga acaacggcag cagcttctca tcgggcatat
     3841 tgtcgccgtt gccgtagcca agttgcgtcg gctgaatcag atggtctatc catttcttac
     3901 cgattaagtt caaaattgcc atttggtttt cagcctgggc actgtaaaaa tacgtttcat
     3961 agccctgctc tttggcgagg cggaacatat tggtatcgcc gccgctgatt tgttccaagc
     4021 cgttggcgtg cggtatgacg ttaaagaaac tgggcaggga tactgccgtc ataaagcctg
     4081 cggaataact ttgtttcaca atcggcttaa aatcggcttg cgacagccgg gttaaaaacg
     4141 gcgaagtttc gcgcccgtaa ccaaacaatt tcaaatgcgc cgcgctttcg ctttcgccca
     4201 taatcaggac gatattttga atactgcctt gcccgatttt gcttggagca ggctgtttga
     4261 acacagggat cttgcttaaa tcaaacaact gatacggcaa cacgcgtccg acaaaataac
     4321 cgaagctgaa ataattggct ttgatgcggc tgtatgtcgg tttgggcgaa ataccgtgct
     4381 cttgtttcgt gtcgaacgaa cgcacgaaaa tcatcagcat taggaaggca aacaggatat
     4441 cggcagaaaa atgcgtctta cggcggaact tggcaaggct gcaaaacagc acgacttccg
     4501 ccacgcccca caaagcaggc agccacaact tatccaacat cgacgcgccc gcgctgccga
     4561 cttcggtaac ctctttcagc atcagccaat agttaatacc cgtcatccag ctttgataaa
     4621 ccgcgtaatg cacattgttg gcaataatgc tgaacgcgaa aaacaccgca atcaacaaac
     4681 gcgttgcctt ataacgcgca aacagataca gcgcagcaat cacaaatgtc agtgcaaacg
     4741 tttccgccat ttttgcagcc ggtagggttt caattccgaa tacaaagcga taggcgattt
     4801 cgctggcggt aagtagggat gaatacagaa agagaacgaa aagggatttt ttcataatgg
     4861 gcagttcaca ataaaagttg caggacgggt tttggggctc ggcaacggta ttcttcagca
     4921 gctatctgtt tacagattgt ttttcaaaaa acgaggttgt ctgaaagtgg tttgtcattt
     4981 gtcggattgt gttgggcatg aatgcctgag ctgcgtgctt gatttttagt gttttgcata
     5041 gttttgtagg tcggacataa atgcccgacc ttatttttta gagtttagac agtatccgca
     5101 tattttttat aatcgaacat acatagta
//
LOCUS       DAWXHA010000126         4664 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.126, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000126 DAWXHA010000000
VERSION     DAWXHA010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4664
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.126"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            74..823
                     /locus_tag="AABD07_001858"
     CDS             74..823
                     /locus_tag="AABD07_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFB2356326.1"
                     /translation="MKKWTRDETLVALYLYYIIPFQKVSKDNPVIQEYAEILGRTPSA
                     LGMKIENLGRLDPTLKVKNISGLSNGSKMDVVVWNEFSGDWEQLNKEFEGVISQYQSN
                     DENSNIEIESPEIPKGRERFARISVRVNQGFFRSSVLAAYNNQCCITGLKQPELLVAS
                     HIKPWREDKDNRLNPRNGLCLNALHDKAFDRGLLGIDENFKIIFSPLLAKTEGFDDLF
                     KPYENRMIRLPERLNPSLEFLKFHRENIFQS"
     gene            914..3277
                     /locus_tag="AABD07_001859"
     CDS             914..3277
                     /locus_tag="AABD07_001859"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HFB2356327.1"
                     /translation="MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSG
                     VVVAEVKSVEKHPDADRLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPVAVLPGN
                     FKIKPTKMRGVPSNGMLCSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDMLFT
                     LKITPNRADCLSVKGIAREVSALTQCAFTPVEIQTAPIGSEKKQAVRIDAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LIVRRAQNGETLACLNEKTVTLADNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVL
                     EAAWFEPEIIVGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGKLPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRITAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMSELPETRRPRFAVYNEMAARGYRE
                     VISYAFVDEQWELDFAANAAPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIACVFGKGSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEVMNHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGVATEAGARLRS"
     gene            3351..3653
                     /locus_tag="AABD07_001860"
     CDS             3351..3653
                     /locus_tag="AABD07_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HFB2356328.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQR"
     gene            3637..3945
                     /locus_tag="AABD07_001861"
     CDS             3637..3945
                     /locus_tag="AABD07_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356329.1"
                     /translation="MTNNVDLTIPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLKSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLEDLDKELC
                     "
     gene            4121..4606
                     /gene="fxsA"
                     /locus_tag="AABD07_001862"
     CDS             4121..4606
                     /gene="fxsA"
                     /locus_tag="AABD07_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HFB2356330.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAVKSSGKVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFFHDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT         1238 a          951 c         1275 g         1200 t
ORIGIN      
        1 aatatgttca gggaataaga aaatctgtat tgtacgattt ccttatggaa aatcagaaag
       61 atagctgata aaaatgaaaa aatggactag agatgaaacc ctggttgccc tttatcttta
      121 ttacatcatt ccttttcaaa aggttagtaa ggacaatcct gttattcaag aatatgctga
      181 aatactgggc aggacaccgt ccgcactcgg tatgaagata gaaaatttgg gtcgtttaga
      241 tcctacgctg aaagtcaaaa atatttcggg attaagtaat ggcagtaaaa tggatgttgt
      301 cgtatggaat gagttttcag gagattggga gcaacttaat aaagaatttg agggagtcat
      361 ttcccaatac caatcaaatg atgagaatag taatattgaa atagaatcac ctgagattcc
      421 aaagggaagg gaaaggtttg caagaatatc agtacgcgtc aatcagggct ttttccgttc
      481 cagtgttttg gcagcataca ataatcaatg ttgtattact ggattaaaac aacctgaatt
      541 gttagttgct agtcatatca aaccctggag ggaagataag gataaccgtt taaacccaag
      601 gaatgggcta tgtttgaatg cgttacatga caaagctttt gatagggggt tgttaggaat
      661 agatgaaaat ttcaaaatta tattttctcc actactggca aaaacagaag gatttgatga
      721 tttatttaaa ccatatgaaa atcggatgat aagactgcct gaaagactaa acccaagtct
      781 ggaattttta aaatttcaca gagaaaatat ttttcagagt tgagtaaata tcaacattaa
      841 ccagaattct aaaacagact gtctgaacga aaattgataa aacaaaagtt aattaattga
      901 ttgagaacat aacatgcaat tctcctactc atggctgaaa acccaagcca atcctgatct
      961 ttctgccgat aaactggaac atcttttgac catggccggt ttggaagtgg aagaaatcga
     1021 tactgccgcc cctgctttca gtggcgtggt tgttgccgaa gtaaaatctg ttgaaaaaca
     1081 tcctgatgca gaccgtttga acgttactca agttgatgcc ggtacgggcg agttggttca
     1141 gattgtttgt ggtgcgccga atgtcaagcc gggcattaaa gtgccgtgtt cgttgccggt
     1201 tgccgttttg ccgggcaatt ttaaaattaa gccgactaaa atgcgcggcg taccatcaaa
     1261 cggtatgctg tgttcgacca atgaactggg tttgcctgat gatggtgtag acggcctgca
     1321 cattctgcct gaagatgcgc ctgtcggtac caacatccgc gaatacttgg atttggacga
     1381 tatgctgttt acgttgaaaa ttacgcctaa ccgcgctgat tgcttgagtg ttaagggcat
     1441 tgcgcgtgag gtttctgcgt tgactcaatg tgcgtttacg cctgttgaaa ttcagacggc
     1501 ccctatcggc agtgagaaaa aacaggctgt ccgtattgat gcaccggctg actgcggccg
     1561 ttttatcagc cgcgttattg aaaatgtcaa cgcgaaagcg gctactcctg attggatgaa
     1621 acaacgtttg gaacgcagcg gtatccgcag catttccgca ttggtggaca ttggcaacta
     1681 tgtgatgctg gaaatcggtc agcctatgca tgttttcgat gctgataagc tgtcgggcag
     1741 tttgattgtc cgccgtgctc aaaatggcga gactttggcg tgtctgaatg agaagacggt
     1801 tactttggct gacaatacac tggtggtcgc tgatgaaaaa ggtgcgttga gcttggccgg
     1861 cttgatgggt ggcgcggcga gcgcggtttc agacggcacg caaaatatcg tgctggaagc
     1921 ggcttggttt gagcccgaaa tcatcgtcgg caaatcgcgc caatacggtt tcggttcgga
     1981 ttcgtcgttc cgcttcgagc gcggcgtgga ttaccgtttg caggcggatg ccattgaacg
     2041 cgccaccgaa ttggttttgc agatttgcgg cggtgcggca ggcgagatgg tggaagcaca
     2101 aggtaaattg cccgaagcca agcaggtcgg attgcgtttg ggtcgtctga aaaccgtgtt
     2161 gggcgtggac attcctgccg aacaggtgga aaccattttg caacacttgg gtctgcagcc
     2221 tgagaaaacg gcggaaggct tccgcattac cgcgccgagc ttccgtttcg acatcgaaat
     2281 tgaggctgat ttgattgaag aaatcggacg cgtttacggc tatgaaaaca tccccgacga
     2341 ttacacgtca ggccgtctga aaatgtcgga actgcccgaa acacgccgtc cgcgttttgc
     2401 cgtttacaac gaaatggcgg cgcgcggcta ccgcgaagtg atcagctatg ccttcgttga
     2461 cgagcagtgg gaactcgatt ttgccgccaa cgccgccccc atccgcctgc aaaacccgct
     2521 ggcggcgcaa tatgccgtga tgcgttctac gttgattggc ggcttagtgg aaattttgca
     2581 aaacaacctg aaccgcaagc aaaaccgcgt gcgcgtgttt gaaatcgcct gcgtgttcgg
     2641 caaaggttca gacggccggt ttgtccaaaa cgaacgcatc ggcggtctgt ggtacggcgc
     2701 ggcgatgccc gaacaatggg gtgagaaaac gcgcaatgcg gatttttacg acatcaaggc
     2761 ggacgtggaa aatctgttga aaaacaaagc ggtcgagttc gttaaaaccg gacatcccgc
     2821 cctgcatccc ggacgtgccg ccaatatcgt ttcagacggc aaagtcatcg gctttgtcgg
     2881 cgaactgcat ccgaaatggc tgcaaaaata cgacctgccg caagcgccgc tggtatttga
     2941 aatcgatatg gcggctgtgt tggaatgcgg gaaaacgcgc tatcgggccg tatcgaaatt
     3001 ccagccggtg cgccgcgatt tggcgtttgt gatgccggaa gttatgaatc atgatgattt
     3061 actgcttgtc ttgaaaggcg cagcaaacaa gttggtacag gaaatcagcg tgtttgacgt
     3121 gtatcgcggc acgggtctgc ccgaagggat gaagagcgtg gcggttaaag tgattttgca
     3181 ggatatggaa aacacgctga cggatgaggc ggtcgagccg cttattggaa aactgattgg
     3241 cgtggcaacg gaggcagggg cgcggcttcg cagttaaaaa ataaatattc gcttgaattt
     3301 taaataaaaa ttggtaataa tccacaactg ttacaacaga aggtaatcat atgacactaa
     3361 ctaaagcaga actggccgat attttggtgg ataaagtcag caacgtcacc aaaaacgatg
     3421 ccaaagaaat tgtcgaactc ttttttgaag aaatccgcag cactttggca agcggcgaag
     3481 aaatcaaaat ttccggtttc ggaaatttcc agttgcgcga caagccgcaa cgcccgggcc
     3541 gtaatccgaa aaccggcgag gaagtgccga ttaccgcccg ccgcgtggta actttccatg
     3601 ccagccagaa actcaaaggc atggtggaac actactatga caaacaacgt tgatttgacg
     3661 attcctgcaa aacgctattt cacgctggac gagttgtgcg gactgttgca aatcagcccc
     3721 tatggttttg cgcaatggca gcatgatcac ggtgtggttg tcggttacgg cggagaacgc
     3781 tacacccgtt tggatgtggt gaaactgttg aaactgaaga gcacgtttgc accgtatgca
     3841 gaaggtgcgg aatcgggttc ggacggcaac cgtccggtta cgcttcagga aatcggagac
     3901 ggtctgaaag acctgttgga ggatttggat aaggagttgt gctgatttga gaccggttgc
     3961 aggtatgcag ccggttttgt tttacacgct aaaaataatt attgcgtgat ttcacattgt
     4021 ttcggcttga agcacatggt tttgtaatca tttacaggca gctcgcttgg aatcctgttc
     4081 gggcggtttg ctgtttactt aaatataagg atgacggtca atgagatttt tcggtatcgg
     4141 ttttttggtg ctgctgtttt tggaaattat gtcgattgtg tgggttgccg attggctggg
     4201 cggcggttgg acgctgtttc taatggcggc aacctttgcc gccggtgtgc tgatgctcag
     4261 gcatacgggg ctgtccggtc ttttattggc tggcgcggcg gtaaaaagta gtgggaaggt
     4321 atctgtttat cagatgttgt ggcctatccg ttatacggtg gcggcggtgt gtctgatgag
     4381 tccgggattc gtatcctcgg tgttggcggt attgctgctg ctgccgttta agggaggggc
     4441 agtgttgcag gcaggaggtg cggaaaattt tttcaacatg aaccaatcgg gcagaaaaga
     4501 gggatttttc cacgatgacg atattatcga gggagaatat acggttgaag agccttacgg
     4561 cggcaatcgt tcccgaaacg ccatcgaaca caaaaaagac gaataaatat gaatggaatg
     4621 ccgtctgaag gttcagacgg catttttccg gtttgaaaat atag
//
LOCUS       DAWXHA010000127         4654 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.127, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000127 DAWXHA010000000
VERSION     DAWXHA010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4654
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.127"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..191
                     /locus_tag="AABD07_001863"
     CDS             <1..191
                     /locus_tag="AABD07_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356331.1"
                     /translation="LRAEQSVQAPFETRQISYAWRESGSPEETVLTAQTADSPDLPVQ
                     AVLNLTHRSHNGKPLILP"
     gene            252..1286
                     /gene="pyrC"
                     /locus_tag="AABD07_001864"
     CDS             252..1286
                     /gene="pyrC"
                     /locus_tag="AABD07_001864"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HFB2356332.1"
                     /translation="MQTLTIIRPDDMHLHLRDDDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASENGARFYGIPENADTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(1365..1790)
                     /gene="nusB"
                     /locus_tag="AABD07_001865"
     CDS             complement(1365..1790)
                     /gene="nusB"
                     /locus_tag="AABD07_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HFB2356333.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(1868..2344)
                     /locus_tag="AABD07_001866"
     CDS             complement(1868..2344)
                     /locus_tag="AABD07_001866"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HFB2356334.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSQMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNFASSEKFDALIAIGVVIRGETYHFELVANESGAGIGR
                     VALDYNIPIANAVLTTENDAQAIERIGEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            complement(2391..2714)
                     /locus_tag="AABD07_001867"
     CDS             complement(2391..2714)
                     /locus_tag="AABD07_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HFB2356335.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADITKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2881..3600
                     /gene="rnc"
                     /locus_tag="AABD07_001868"
     CDS             2881..3600
                     /gene="rnc"
                     /locus_tag="AABD07_001868"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HFB2356336.1"
                     /translation="MKDDVLKRQAHTAIQKKLGYAFRDMSLLRRALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSSGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFAERVRRADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVISCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            3635..4570
                     /locus_tag="AABD07_001869"
     CDS             3635..4570
                     /locus_tag="AABD07_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HFB2356337.1"
                     /translation="MKANMDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIG
                     QKISITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGG
                     VDVVVFVVEAMRLTDADRVVLKQLPKHTPVILVINKIDKDKAKDRYALEAFVAQVRAE
                     FEFAAAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLF
                     RYLGEELPYAMNVEVEQFEEGDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEAR
                     LDMEKLFDNKVFLKVWVKVKSGWADDIRFLRELGL"
BASE COUNT          998 a         1167 c         1430 g         1059 t
ORIGIN      
        1 aattgagggc ggaacagtcg gtgcaggcac cgtttgaaac caggcaaatc agctatgcct
       61 ggcgggaatc gggcagccct gaagaaaccg tattgaccgc acaaaccgcc gattccccgg
      121 atttacccgt acaggcagta ttgaacctaa cgcaccgttc ccataacggg aaacccctaa
      181 ttctcccctg acttcagacg gcataaagtc ggcatgccgt ctggaaacca aaaatctaaa
      241 aaggaacaac catgcaaacc ctgaccatca tccgacccga cgatatgcac ctgcacctgc
      301 gcgacgatga cgcgctcaaa gccgttgccc cttataccgc ccgccagatg gggcgcgccg
      361 tcatcatgcc caacctcaaa ccgccagtcg tcagtgtagc cgacgcgctt gcctacaaag
      421 cgcgcattat ggcggcgttg cccgaaggca gcgcgtttga gccgctgatg acgctttacc
      481 tgaccgacca agccacgccc gaactcgtgc gcgaagccaa agccgccggc atcgtcgcct
      541 tcaaactcta ccccgcaggc gcgaccacca attccgattc cggcgtaacc gacctgttca
      601 aactcatccc cgttttggaa gaaatggcaa aacagggcat cctgttcctc gttcacggcg
      661 aagtaaccga ccccgaaatc gacattttcg accgcgaagc cgcctttatc gggcgcgtga
      721 tgaaacccgt tttggcgcaa gtgccgaatc tcaaagtcgt gttcgaacac atcaccaccg
      781 ccgaagccgc ccgcctcgtt ttggaagcgg gcgacaacgt tgccgcctcc gtgaccccgc
      841 aacacctcct gctcaaccgc aacgacctct tggtcggcgg tgtgcgcccc catcatttct
      901 gcctgcccgt cctcaagcgc gaaacccacc gtcaggcatt ggtcgccgcc gttaccggcg
      961 agaaggcgca caaattcttc ctcggcaccg actccgcgcc gcacgccaaa tccgccaaag
     1021 aaaacgcctg cggctgcgcc ggtatgttca gcgcgatgac cgctatcgag ctttacgccg
     1081 aagtgtttga aaaagcaggc gcgttggaca aactcgaagc cttcgcctcg gaaaacggcg
     1141 caaggttcta cggcattccg gaaaacgccg acacgattac ccttgtcaaa caaagccaaa
     1201 ccgttcccgc aagcgtccct tacggcgacg gcgaacttgt cccgatgcgc gcgggcggcg
     1261 aaatcggctg gacggtgcag tattgattga acggtcaagc aaaatgccgt ctgaaaggtt
     1321 ttcagacggc atttgtgtat tttccgattc ggattttccg agtatcaacg gcgtttgggc
     1381 tcgtctgggc ggatttgggc ggcgagtttg tcgaggatgc cgttgacgaa tttgtgcccg
     1441 tccgtgccgc cgaaggtttt ggtaacttcg atggcttcgt tgataatgac ggggtagggc
     1501 gtttcgggca tagcggaaag ctcgtggcag gcggtcagca aaacggcgcg ttcgatgggg
     1561 ttgaggtctt tttcgtccct gtcgagcagc gggcggattt tttggatgta gtccgctgcg
     1621 ttggtttgtg tgccgaagaa gagtttgttg aacaattctt cgtccgcttt ggcaaagtcg
     1681 gacatttcgc ggatgttttt agcaatttcg ggcgcggcgg tgcggttgat aagggattgg
     1741 taaacggctt gtacggcaag ctcgcgggaa cggcggcggg ctgttttcat gatttttcct
     1801 tgaaacggtt gggcggcacg gtatgccgtc tgaaacggaa agggcgcatc ggtgtacgcc
     1861 ctgtttgtta ttcttcgtct tcaaactgtt cttcgagcag aaggttgacg aggttggcgc
     1921 attctacggc gactttggcg gcatccgagg ctttttctcc aatccgttca attgcctgcg
     1981 cgtcgttttc ggtggtcagg acggcgttgg caatcgggat gttgtagtcg agtgcgacgc
     2041 ggccgatccc tgcgccggat tcgttggcaa ccagctcgaa atggtaggtt tcgccacgga
     2101 tgacgacgcc gatggcaatc agtgcgtcaa atttttcgga agaggcaaag ttcatcagcg
     2161 cgatggggat ttcaagcgcg ccgggtacgg tggcgacggt gatgttttcg tctgctacgc
     2221 ccaattcttg gagggtgcgg cagcagactt tgagcatttg gctgccgatt tcgttggtga
     2281 agcgtgcctg tacgatgccg atgcggaggt gtttgccgtc gaggttgggg gcgatggtgt
     2341 tcattgggtg tcctttggta ttcggggttt cggaatgccg tctgaaggtt tcagtcttgc
     2401 ggctgccagt cggcaacggt ttggaatgtg ccgtcttcgg caagctccca cgcgctgcct
     2461 tcgggttggg aaagcagtgc ggcggtttca gggttggttt tggtgatgtc ggcgaggctg
     2521 acgatgctga agttgtcggg gtcgtcggtg tattcgtcgg tttcgtcgcc gctgaagaaa
     2581 cgccagccgc tgtcgttttc aaaaacgggg gcttcgcggt aaaggaagcc gacgggccgg
     2641 ttttgtttgg cgacggtgtt ggtggcgatg cagcggtcga gtgccgagga aagtgcttgt
     2701 gcaaatgcgt tcattgcggg aatacgttgg gggggaactt gcggatttta ccacgattcc
     2761 cgcgttgtcg gcagacggcg gcggtttggt ggtacaatgt gcgccgtttg cagccttaag
     2821 gtgtttctgt atttttggag tatggaaacg cattcgggct gttttttgcg gaagacggta
     2881 atgaaagacg atgttttgaa acggcaggca catactgcga tacagaaaaa gttaggctac
     2941 gcgttccgcg atatgtcgct tttgcggcgg gctttgaccc acaggagcca tcatgcgaag
     3001 cacaacgaac ggttcgagtt tgtcggcgat tcgattttga attatacggt ggcgcggatg
     3061 ctgtttgacg cgtttccgaa gttgaccgag ggcgagttgt cgcggttgag ggcgagtctg
     3121 gtcaatgagg gcgtgctggc ggaaatggcg gcggaaatga atgtcggcga cggtctgtat
     3181 ttgggggcgg gcgagttgaa gagcagcggc ttcagacggc cttcgatact ggcggacgcg
     3241 atggaggcga tgtttgccgc cgtcagcttc gatgccgatt tcaacacggc ggaaaaggtg
     3301 gtgcgccatt tgtttgcaga acgcgtccgg cgcgccgatt tccaaaatca ggcaaaagac
     3361 ggcaaaactg ctttgcagga ggcgttgcag gcgcgccgtt tcgccttgcc gaaataccgc
     3421 atcgaagagc aaatcggcca tgccaacgac agtatgtttg tcatttcctg cgatttgggc
     3481 gaactgggtt tcgtgtgccg tgccaaaggg acgagccgca aggcggcgga acaggaggcg
     3541 gcgaaagagg ctttgaaatg gctggaagag aagctgccgc tgaagaagaa aaagaaatga
     3601 ggcggcgcgt gaatatgccg tctgaaatgt ggatatgaaa gcgaatatgg atattgaaac
     3661 cttccttgca ggggaacgcg ccgccggcgg ataccgttgc ggcttcgtgg cgattgtcgg
     3721 tcgtccgaac gtgggcaaat caacgctgat gaaccatctc atcggtcaga aaatcagtat
     3781 taccagcaaa aaggcgcaga cgacgcgcaa ccgcgtaacg gggatttata ccgacgatac
     3841 cgcgcagttc gtgtttgtcg atacgccggg ctttcaaacc gaccaccgca acgcgctcaa
     3901 cgacaggctg aatcaaaatg ttaccgaggc gctcggcggt gtggatgtgg tggttttcgt
     3961 cgtggaggcg atgcgcctta ccgatgccga ccgcgtcgtg ttgaaacaac tgcccaagca
     4021 cacgccggtc attttagtga tcaacaaaat cgacaaggac aaggcgaaag accgttacgc
     4081 gctggaggcg tttgttgccc aagtgcgcgc cgaatttgaa tttgcggcgg cggaggcggt
     4141 cagtgcgaaa cacggtttgc ggattgccaa cctgttggag ctgctcaagc cgtatctgcc
     4201 cgaaagcgta ccgatgtatc ccgaagacat ggttacggac aaatcggcgc gttttttggc
     4261 gatggaaatc gtgcgtgaaa aactcttccg ctatttgggc gaggagctgc cttatgcgat
     4321 gaacgtcgaa gtggagcagt ttgaagaggg agacggtttg aaccgcatct acatcgccgt
     4381 tttggtcgac aaagaaagcc aaaaggcgat tttgatcggt aaaggcgggg agcgtttgaa
     4441 aaaaatttcc accgaagcgc ggctggatat ggaaaaactg tttgataaca aagtattttt
     4501 gaaggtctgg gtcaaagtca aatccggttg ggcagacgac attcgcttcc tgcgcgagct
     4561 gggtttgtag tttttcttgc tgaactttac gcaaatgccg tctgaacagg tttcggacgg
     4621 cattttgttt caatcgggaa tatctttgtt aaaa
//
LOCUS       DAWXHA010000128         4532 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.128, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000128 DAWXHA010000000
VERSION     DAWXHA010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4532
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.128"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(116..835)
                     /locus_tag="AABD07_001870"
     CDS             complement(116..835)
                     /locus_tag="AABD07_001870"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HFB2356338.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEIVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDPSATRYETITFDEALNKNLKVMDATAFALCRERKLNIVVFGI
                     AKQGSLKRVITGEDEGTLVHC"
     gene            complement(1052..1906)
                     /locus_tag="AABD07_001871"
     CDS             complement(1052..1906)
                     /locus_tag="AABD07_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HFB2356339.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVESERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENDTEVVSFIRYKVGEGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(2035..2763)
                     /gene="rpsB"
                     /locus_tag="AABD07_001872"
     CDS             complement(2035..2763)
                     /gene="rpsB"
                     /locus_tag="AABD07_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HFB2356340.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQEAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQETAAE"
     gene            complement(2936..3169)
                     /locus_tag="AABD07_001873"
     CDS             complement(2936..3169)
                     /locus_tag="AABD07_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356341.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWVVLPTVFTVFA
                     VTVRRRNRLMGQQEQAESEQQRAQRQKDSGTKP"
     gene            3247..3828
                     /locus_tag="AABD07_001874"
     CDS             3247..3828
                     /locus_tag="AABD07_001874"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HFB2356342.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAAAVKINRLLKRYIKRGR
                     KIGVYWPMGKELRLGGFVRAAQKRGAKLYLPYIEPHTRRMWFTPYPERGMERERKRGR
                     AKLHVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLSAMKYRLQAKTV
                     GVGFACQLVDRLPREAHDLPLDGFVSEAGILCF"
     gene            3889..4479
                     /locus_tag="AABD07_001875"
     CDS             3889..4479
                     /locus_tag="AABD07_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFB2356343.1"
                     /translation="MSERIILSVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEADRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRKRINTCCKIMLLDYAFDVLACCCAGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT          984 a         1055 c         1295 g         1198 t
ORIGIN      
        1 tgaaaaacaa attgtatcaa aattgtaaat ttaatccact ataatctcca tataataaat
       61 ggctgtctga agcccatatg cgactatatc tgccgaccct atggtcaatc atcaatcagc
      121 agtggaccag tgtgccttcg tcttcgccgg taatgacgcg tttgagcgag ccttgtttgg
      181 cgatgccgaa gacgacgata ttgagcttgc gttcgcggca gagggcaaag gcggtcgcgt
      241 ccatgacttt gaggttttta ttcaaggctt cgtcaaaagt aatggtttcg tagcgtgtgg
      301 cggacgggtc ttttttcggg tctgcggtgt acacgccgtc gacgttggtg gctttgagca
      361 tcacgtcgca gttcatttcc gcgccgcgca atgcggcggc agtgtcggtc gtgaagaacg
      421 gattaccggt accggcggcg aaaatcacga ctttgccttc ttccaaatat tgaatggctt
      481 taggacgggc gtaagtttca gcgatttgct gcatagacag tgcggattgt acgcgcgctt
      541 tgatgcccaa ggtttcaaat gcgtctttga gtgccaaggc gttcatcacg gtcgccatca
      601 tgcccatgta gtcggcagtg gcgcggtcca tgctgcctgc ttgtgcagat acgccgcgga
      661 aaatgttacc gccgccgaca acgataccga cttgcacacc cattttcacg atttcggcaa
      721 tttcgccgac agtttgaaca atggtatcgt gattgatgcc gaacggatcg gaacccatca
      781 gggattcgcc ggagagtttc agtaatacgc gtttgtattt gatttgctgt gtcatgggat
      841 accttgcttt cttgaatgtc gtcggtcgga gttgggacgt ctgaatttca aatggtcgga
      901 ttacaatgat atggtgtgtc gttctattat tgttttgttt tcagacggcc tttatattcg
      961 gtcgtcttaa aataggtacc gtaaacggtt ttctcaaaaa aaagcaccct gattcgtttg
     1021 gaatccaggt gctttctttt tcataagtgc cttacacttt ggcggctgcg gctacttcgg
     1081 ctgcgtagtc gacaacggct ttctcgatac cttcgcctac tttgtagcgg atgaagctaa
     1141 ccacttcagt gtcgttttct ttagcgaatt gggcaacagt ttggtcaggg ttcatcacga
     1201 atgcttggcc gttcagagtg atttcagcca agaatttgcg gatacggcct tcaaccattt
     1261 tagcggcgat gtcggcaggt ttgccggaag cgatggcttg ctcggtgtag atgtggcgtt
     1321 ctttttcaac ggtttcagca tctacttcgg cttcgcttac gcattgcggt ttggcggcaa
     1381 cgatgtgcat accgattttg cgtgctacat cttcagagcc tttgtactcg accaaaacgc
     1441 cttcggtcgc caatgcgccg tggatgtagg caaccagttg gttggcagtg tcaatcactt
     1501 ggaagcggcg gacagacatg ttctcgccca atttagcgat gatggctttg cgttctgatt
     1561 caaccagttc gctcagttct tcaacagaag ccggtttttt ctcggcagca gttttcgcaa
     1621 cgaagttggc aaattctacg aagccggcgt ctttagcaac gaagtcggtt tcgcagttta
     1681 cttcgaccaa tgcgccgaca ttaccgttga ttgcataagc caatacgcct tcggcagcag
     1741 tacgaccagc cagtttgccc gctttcgcac cggatttaat acgcaggatt tcttcggctt
     1801 tgtcgaagtt gccttcagct tcaaccaagg cttttttgca ttccatcata cccaggccgg
     1861 tagcggcgcg caggtcggca accatttttg cagtaatttc tgccattttg aatctcctag
     1921 atttttggga aatacggaaa ggattttcca cattcgggaa tcgtgtgccg cgaacgggcg
     1981 ttcagacggc atatttgaga aaaggggcat aacgcccctc ttctgtgtac cgaattactc
     2041 ggcagcggtt tcttgggcag cggctacggt ttcttgcagc gcttggtttt tgccttccaa
     2101 aactgcgtcg gcgatgcctc ggcagtacag gcggatggct ttggcggagt cgtcgttgcc
     2161 ggggatgacg tatttcacgc cgtctgggct gttgttggta tcgactacgg cgataacggg
     2221 gatgcccagt ttttcagctt caaccagagt acctttttgg tagccggtat cgataacgaa
     2281 aatcgcgtcg ggcaggcctt tcatgttttt gataccgccc aaagagcgtt ccagtttttc
     2341 aacgtcgcgt tgcatttcca gaatttcttt tttgctgaaa ccgctttcgg cagcattttc
     2401 caaggctgcg gttttttctt ccaggcgttt gatggattgc ttaacggttt tgtagttggt
     2461 cagcataccg cccaaccagc ggtggtcgac gaaaggcata ccggcgcggg tcgcttcttc
     2521 gcggatgatg tcgcgtgcct ggcgtttggt acctacgaac aataccgtac ctttgttggc
     2581 aaccagacga cgtacggctt cttgcgcctc ttggaacatc ggcagggttt tttccaagtt
     2641 tacgatatgg attttgttgc gcgcgccgaa aatgtattga gccattttcg ggttccagaa
     2701 acgggtttgg tgaccgaagt gaacaccggc ttcaatcatc tgacgcatag taatttgaga
     2761 catgttattt ccttgaaagg gttaaagagc acacattcaa tcgcatagaa cttgataggc
     2821 ggcgcctatt gtcaagcacc cttcggcgaa agtgggcata agttttaaaa atagtgtgtt
     2881 tccgaaatgg aaaactgacg gattatagcg gataagatgc cgtctgaaaa gggattcagg
     2941 gttttgtgcc gctgtctttt tgccgttgtg cgcgctgctg ttcggattct gcctgttcct
     3001 gctgccccat caggcggttg cggcggcgga cggttacggc gaagaccgtg aacacggtgg
     3061 gcagaaccac ccaaaaaacc aaataaatca aagcgcgcgc aatactcggc tgcgcggcgg
     3121 aatacataac ggcaacaaaa agatagccga tggcgacgat gtgccacatt gtgtgcgtcc
     3181 tgtttgaatg ttaacaaaat cgttataatc gcaacattct accgcaatcc tgaaaggccg
     3241 tctgaaatga ggaacgagga aaaacgcgcc ctgcgccgcg aattgcgcgg gcggcgttcg
     3301 caaatggggc gggacgtgcg ggcggcggcg gcggtaaaaa tcaaccgcct gctcaaacgt
     3361 tatatcaagc gcggtcggaa aatcggcgtg tattggccga tgggcaagga attgcgtttg
     3421 ggcggctttg tccgcgcggc gcaaaaacgc ggcgcaaaac tctatctgcc ttatatcgaa
     3481 ccgcacacgc ggcggatgtg gtttacgccg tatcctgaac gcggaatgga acgggaacgc
     3541 aagcgcggta gggcgaagct gcatgtccct cagtttgcag ggcgcaaaat ccgcgtgcac
     3601 ggtttgtcgg tattgctcgt cccgcttgtc ggcatagacc gcgaaggcta ccgtttgggg
     3661 caggcaggcg gctattacga tgcgacgctt tcggcgatga aataccgttt gcaggcgaaa
     3721 accgtgggcg tgggctttgc ctgccagttg gtggacaggc tcccacgcga ggcgcacgac
     3781 ctgccgctgg acggttttgt atcggaagcg gggatattgt gtttttagcc gttcagacgg
     3841 catttcgggc ggaaatgccg tctgaaggcg gaatattggg agaaaaggat gtcggaaagg
     3901 ataatactgt cggtcttgtc gttgggcggc gtacggctcg aaccgttgga tgtgcatcat
     3961 gaaacgggtt tgcgcgaggc ggtttgcgat ggggaggttt ggaagctggg ggtaacgtcc
     4021 gcgccccatc cggatagggt ggcagactat atcgggacag cattggcaac gcgtttggcg
     4081 tttgcggttg tcgatgaaga ggcggacagg gtggtcggga caacggcgta ttatcatttt
     4141 gaaccgcaga ttccgcgttt ggatatcgga ttcacatggt atgcggcatc ggcacggcgg
     4201 aaacggataa acacctgttg caaaatcatg ctgttggatt acgcatttga tgttttagct
     4261 tgctgttgcg cgggatggcg cacggatatt ctgaaccttg cctcgcaacg tgccatcgaa
     4321 cggctgggcg cggaaaaaga cggcgtgctg cgtatgcata tgctccgtaa agacggcagt
     4381 gtgcgcgata cggttgtgta cagtatgctg agggaagatt ggtgcaaaaa cagggaaatc
     4441 ctgaccggca ggttggcagg gtatggcgtg caggtgtgag gcagtattct caaatttaaa
     4501 aaacttaacg cgatatgctg acaatctttt aa
//
LOCUS       DAWXHA010000129         4529 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.129, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000129 DAWXHA010000000
VERSION     DAWXHA010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4529
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.129"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            147..1982
                     /gene="edd"
                     /locus_tag="AABD07_001876"
     CDS             147..1982
                     /gene="edd"
                     /locus_tag="AABD07_001876"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HFB2356344.1"
                     /translation="MNHTPIHPKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRDELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLDAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVVKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFICVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVTGELNVLINEAE
                     WNVREVERIDLGANQQGCGRELFAGFRSMTSSAETGAMSFGGEFA"
     gene            2192..2830
                     /locus_tag="AABD07_001877"
     CDS             2192..2830
                     /locus_tag="AABD07_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HFB2356345.1"
                     /translation="MSKLTPRQILTAGAVVPVMAIDDLSTAVDLSRALVEGGIPTLEI
                     TLRTPVGLEAIRLIAKEMPNAIIGAGTVTNPEQLKAVEDAGAVFAISPGLHESLARAG
                     RNSGIPLIPGVATPGEVQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(3019..3204)
                     /locus_tag="AABD07_001878"
     CDS             complement(3019..3204)
                     /locus_tag="AABD07_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356346.1"
                     /translation="MGYFGGNGGYLKRKQPKNLWLDVGCLKKRNFAKVSERYFLTTVN
                     LLVSAAHHGILPIGRFL"
     gene            complement(3425..4465)
                     /locus_tag="AABD07_001879"
     CDS             complement(3425..4465)
                     /locus_tag="AABD07_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HFB2356347.1"
                     /translation="MKAMVYHGANDIRFEEKPRPQIIDPTDAVVKIVKTTICGTDLGI
                     WKGKNPEVADGRILGHEGIGIVEEVGEAVKNIKVGDKVIISCVSKCCTCDNCKIQLYS
                     HCRNGGWILGYMIDGTQAEYVRTPYADNSLVPPHDNVNEEIALLLSDALPTAHEIGVQ
                     YGDVKPGDTVFIAGAGPVGMSALLTAQLYSPAAIIVCDMDENRLKPAKELGATHTISP
                     ASGDVSKQVFAIVGEDGVDCAIEAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKL
                     EKLWIKNLAITTGLVNANTTEILMKAIFSSSVDYTKMLTHRFKFSELEKAYDVFKHAA
                     ENQAMKVVLEAD"
BASE COUNT         1113 a         1339 c         1097 g          980 t
ORIGIN      
        1 acagtacaaa tagtacggca aggcgaggca acgccggacc ggtttaaatt taatccacta
       61 tactcaccgt ctaacatacc cgatacaaaa atcagaaacg cacaaacaaa tccccaatac
      121 caccccgttc cgccaggaga ccgaacatga accacactcc tatccacccc aaactcgccg
      181 aaatcaccgg gcgcattatc gaacgcagcc gtccgacgcg tgaaaaatat ctggcgaaaa
      241 tccgcagtgc caaacagatg ggacgcttag agcgcaacca gctcggctgc agcaatttgg
      301 cgcacggcta tgccgccatg cccaaaagca tcaaaatcga aatgcttcag gaaaccgtcc
      361 ccaacttagg catcatcact gcctacaacg acatggtttc cgcacaccag ccgtttaaag
      421 acttccctga ccaaatcaaa gacgaagcac aaaaaaacgg cgcgaccgca caagtcgccg
      481 gcggcacgcc tgccatgtgc gacggcatca cgcaaggcta cgccggcatg gaattgtcac
      541 tgttttcccg cgacgtgatt gcgatgagta ccgccgtcgg gctgtcgcac caaatgtttg
      601 acggcagcct gtttatgggc gtgtgcgaca aaatcgttcc gggtctgatg ataggtgcgc
      661 tttcgttcgg tcatattccc ggtatcttcg ttccggcagg cccgatgtcc agcggcatcg
      721 gcaataaaga aaaagcccgt acccgccaac ttttcgccga aggcaaagtc ggacgcgacg
      781 aacttttgaa aagcgaaatg ggttcttacc acagcccggg cacctgcact ttctacggca
      841 cggcaaactc caaccaaatg atgatggaaa tgatgggcgt acacctgcct gccgccgcct
      901 ttgtccaccc ctataccgac ctgcgcgaag ccctgacccg ctacgccgcc ggacacctcg
      961 cgcgcggcat caaaaacggc acgattaaac ctttgggcga aatgttgacc gaaaaatcct
     1021 tcatcaatgc cctgatcggt ttgatggcga ccggcggctc gaccaaccac accatgcacc
     1081 tcgtcgctat ggcgcgcgcc gcaggcgtga ttttgaactg ggacgacttc gacgaaattt
     1141 cttccatcat cccgctgctc atccgcgtgt atcccaacgg caaagctgac gtgaaccact
     1201 ttaccgcagc aggcggcctg cctttcgtta tccgcgaatt gctggacgca ggcttattgc
     1261 acgacgatgt cgataccgtc gtcggacacg gtatgcgcca ctacactaaa gagcctttcc
     1321 tcatcgacgg caaactcgaa tggcgcgaag cccccgagac cagcggcaac gacgacatcc
     1381 tgcgtaaagc cgacaatccg ttctccccgg acggcggtct gcgcctgatg aaaggcaaca
     1441 tcggacgcgg cgtggttaaa gtgtcagccg tacgcgaagg ctgccgcatc atcgaagcac
     1501 ccgccatcgt gttcaacgac cagcgcgaag tgttggcggc atttgaacgc ggcgagttgg
     1561 aacgcgattt tatctgcgtc gtccgctacc aaggcccgcg tgccaacggt atgcccgaat
     1621 tgcacaaact gaccccgcct ttgggcatcc tgcaagaccg cggcttcaaa gtggcgctgc
     1681 tgaccgacgg ccgtatgtcc ggcgcgtcag gcaaagtgcc cgcgtccatc cacatgacgc
     1741 ccgaagccct gatgggcggc aacatcgcca aaatccgtac cggcgacctg attcgcttcg
     1801 actccgttac cggcgaactc aacgtcctga ttaacgaggc cgaatggaac gtccgagaag
     1861 tcgagcgcat cgatttgggc gcgaaccaac aaggctgcgg ccgcgaactc ttcgccggct
     1921 tccgcagtat gaccagcagt gcggaaaccg gtgcgatgag cttcggcgga gaatttgcct
     1981 gatgcgcgtt tcagacggcc ttttaaaaca gaaggccgtc tgaaaaatta ttgaagccgt
     2041 ttaaaataga tgcagacgta gcgtgagctt tgcccgcgaa caaaacccaa gcaacatcag
     2101 aatgttttac cccaaaggtt gtctgaaaac ttaacccccc ccatcccgtt tgacctcaac
     2161 aaaaacgaca ccccccactt ggagaaccga aatgtccaaa ctgacccccc gccaaatcct
     2221 gaccgccggc gcagttgtgc ctgtgatggc gattgacgac ttaagcaccg ccgtcgattt
     2281 gtcccgcgcc cttgtcgaag gcggcatccc caccctcgaa attaccttgc gcacccccgt
     2341 cggactcgag gccatccgcc tgattgccaa agaaatgccc aacgccatca tcggcgcagg
     2401 tacggtaacc aatcccgaac agctcaaagc cgtcgaagac gcaggcgcgg ttttcgccat
     2461 cagcccgggt ttgcacgaat ccctcgccag agccggccgc aacagcggca ttcccctgat
     2521 tcccggcgtt gccactccgg gcgaagtcca actggctttg gaacacggca tcgacacact
     2581 caaactcttc cctgccgaag tcgttggcgg caaagcgatg ctcaaagccc tctacggacc
     2641 ttacgccgac gtacgcttct gcccgaccgg cggcatcagc ctcgccactg cgcccgatta
     2701 cttggcattg cccaacgtct tatgcgtcgg cggctcttgg ctgacaccga aagaagctgt
     2761 aaaaaacaaa gactgggaca ccattacccg cctcgccaaa gaagcggcgg cattgaaacc
     2821 caaagcctga accgcatcgt aaaaatgccg tctgaagccc tttccagtct cagacggcat
     2881 tttgccgctt ggcgactcag tcggcataca cagcagcacc gcccctaaaa tgcccatcca
     2941 tctccagaac aatgcgaatg acgcgcgata tgcggagacc tatgacgaaa aaataattat
     3001 aatatattta tcaattagtc ataaaaatcg ccctatcggt aaaatgccgt gatgagcggc
     3061 tgaaactaac aagttaaccg tcgttaaaaa ataacgctca gagacctttg caaaattcct
     3121 tttcttcaaa cagccgacat ccaaccacag gtttttcggc tgttttcgtt tcaaataacc
     3181 gccgttccca ccaaaatatc ccattaatcc cccttaaata tagtggatta aatttaaacc
     3241 agtacggcgt tacctcgcct tgccgtacta ttttactgtc tgcggcttcg ttgccttgtc
     3301 ctgatttaaa tttaatccac tatacctgat tgatcaggaa cagcccgttt tacacggctg
     3361 aaaaaatgcc gtctgaaaca cgttcagacg gcatccgctt aaaaaacaac tgattcaacg
     3421 gcgattaatc cgcttccaaa accactttca tcgcttggtt ttcggcggcg tgtttgaaca
     3481 cgtcgtaggc tttttccaat tcgctgaatt tgaaacggtg ggtcaacatt ttggtgtaat
     3541 ccactgagct gctgaaaatt gccttcatca gtatttcggt ggtgttggca ttgaccaaac
     3601 cggtagtgat ggcaagattt ttaatccaca gtttttccag tttgaaatca acggattgac
     3661 cgtgtacgcc gacgacggcg atatgaccgc cgggtttcac gatgtcttgg cacatattcc
     3721 aagttgcagg gataccgacc gcttcgatgg cacaatctac gccgtcttcg ccgacgatgg
     3781 cgaaaacttg tttggagacg tcgccggaag cggggctgat ggtatgggtc gcgcccaact
     3841 ctttcgccgg tttcaaacgg ttttcgtcca tatcgcacac gataatggcg gcagggctat
     3901 acagttgggc ggtcaacaag gcggacatac cgacagggcc ggcacctgcg atgaatacgg
     3961 tatcgccggg tttcacatcg ccgtattgca cgccgatttc gtgggcggtc ggtaaagcgt
     4021 cgctcaacag cagggcgatt tcttcgttga cgttgtcgtg cggcggcacg aggctgttgt
     4081 cggcataagg cgtgcggacg tattcggcct gcgtgccgtc aatcatatag cccaaaatcc
     4141 agccgccgtt gcggcagtgc gaataaagtt ggattttgca gttgtcgcaa gtgcagcatt
     4201 tgctgacgca tgaaataatg actttatcgc cgactttgat gttttttaca gcctcgccga
     4261 cttcttctac aataccgatg ccttcatgac cgaggatacg accgtcggcg acttcggggt
     4321 ttttgccttt ccaaataccc aagtcggtac cgcaaatcgt ggttttgacg attttcacca
     4381 ccgcatcggt cggatcgata atctgcgggc ggggtttttc ttcaaaacgg atgtcgtttg
     4441 cgccgtgata aaccattgct ttcatgctga tactccttgc ttgttgataa ataatttcaa
     4501 taccacaata aagtttcttt atatgagtt
//
LOCUS       DAWXHA010000130         4433 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.130, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000130 DAWXHA010000000
VERSION     DAWXHA010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4433
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.130"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..258
                     /locus_tag="AABD07_001880"
     CDS             <1..258
                     /locus_tag="AABD07_001880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356348.1"
                     /translation="TNHILKQIISKSDFFKIKFQKKETGKIRHKTLTYSKPSVLQRKY
                     PKKTICLPSVSNRYTAGTRYFSDGAAVVRTDKNVTAAERIA"
     gene            312..2696
                     /gene="ppsA"
                     /locus_tag="AABD07_001881"
     CDS             312..2696
                     /gene="ppsA"
                     /locus_tag="AABD07_001881"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HFB2356349.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLNERISAALAKLDVEDVSELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWDKMVTDADGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKKAMRH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYNQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKASKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVEVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRYAINGEKTVLCEGRAIGQKVGQGKVRLIKDTSEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLENGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEIIRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSVYEPHEENPMLGFRGAARYVAESFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVGEGIESVSLNPDTVIETWLYLANELNK"
     gene            2917..4176
                     /gene="rho"
                     /locus_tag="AABD07_001882"
     CDS             2917..4176
                     /gene="rho"
                     /locus_tag="AABD07_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HFB2356350.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDSINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKIGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPASGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
BASE COUNT         1157 a         1321 c         1053 g          902 t
ORIGIN      
        1 acaaatcata ttttaaaaca aattatctca aaatcagatt tctttaaaat aaaattccaa
       61 aaaaaagaaa caggaaaaat acggcataaa acattaacct attcaaaacc atctgtttta
      121 caaaggaaat acccgaaaaa aacaatatgc ctgccatcgg tttcaaaccg ctacacagcc
      181 ggaacccgct atttttcaga cggcgcagcg gttgtccgga cagataaaaa cgtgacagcg
      241 gcggaacgaa tcgcttaaaa taagcaagcg gatttgtttc ttttttaaca tattttggat
      301 tggacacaca aatggccgac aactacgtaa tctggtttga aaacctgcgt atgacagatg
      361 ttgaacgcgt gggcggtaaa aacgcctcgc tgggcgaaat gatcagtcaa ctgaccgaaa
      421 aaggcgttcg cgtccccggt ggctttgcca ccacagccga tgcctaccgc gcatttctcg
      481 cacacaacgg tctgaacgaa cgcatttccg ccgctctggc aaaattggat gtcgaagacg
      541 tttccgaact ggcacgcgtc ggcaaagaaa tccgccaatg gattttggac acgcccttcc
      601 ccgaacagct cgatgccgaa atcgaagcgg catgggacaa aatggttacc gatgccgacg
      661 gcgcggacat ttccgttgcc gtacgctctt ccgcaaccgc cgaagacctg cccgacgcat
      721 catttgccgg ccaacaggaa accttcctga atatcaatgg cttggataac gttaaaaaag
      781 cgatgcgcca cgttttcgcc tccctgtaca acgaccgcgc catttcctac cgcgtccaca
      841 aaggcttcga acacgacatc gtcgcccttt ccgccggcgt tcaacgcatg gtgcgttccg
      901 acagcggcgc atcaggtgtg atgttcaccc tcgacaccga atccggctac aaccaagtcg
      961 tctttgttac ctcctcttac ggtctgggcg aaaacgtcgt acaaggcgcg gtcaacccgg
     1021 acgaatttta tgtgttcaaa cccacgctca aagcaagcaa acccgccatc ctgcgcaaga
     1081 ccatgggttc gaaacacatc aaaatgattt tcaccgacaa agccgaagcc ggcaaatcgg
     1141 taaccaacgt cgaagtcccc gaagaagacc gcaaccgctt ctccattacc gacgaagaaa
     1201 tcaccgagtt ggcacactac gcgctgacca tcgaaaaaca ctacggccgc ccgatggata
     1261 tcgaatgggg acgcgacggc ctggacggca aactctacat cctgcaagcc cgccccgaaa
     1321 ccgtcaaatc ccaagaagaa ggcagccgca acctgcgccg ctacgccatc aacggcgaaa
     1381 aaaccgtctt gtgcgaaggt cgtgccatcg gtcaaaaagt cggtcagggc aaggtgcgcc
     1441 tgattaaaga tacttccgag atggattccg tcgaagccgg cgacgtactg gttaccgaca
     1501 tgaccgatcc ggattgggaa cccgtgatga aacgtgcttc cgccatcgtg accaaccgcg
     1561 gcggacgcac ctgccacgcc gccatcatcg cgcgcgaact gggtattcct gccgtcgtcg
     1621 gctgcggcaa tgcgaccgaa ctcttggaaa acggtcagga agttaccgta tcctgtgccg
     1681 aaggcgatac cggctttatc tatgccggcc tgctggacgt acaaattacc gatgtcgcct
     1741 tggacaatat gccaaaagca cccgtcaaag tcatgatgaa cgtcggcaat cccgaactcg
     1801 cattcagctt cgccaatctg cccagcgaag gcatcggctt ggcgcgtatg gaatttatca
     1861 tcaaccgcca aatcggcatc cacccgaaag ccttgttgga atttgacaaa caagacgacg
     1921 aactgaaagc ggaaattatc cgccgcatcg ccggttacgc atcccctgtc gacttctacg
     1981 tcgataaaat cgccgaaggc gtggcaacgc ttgccgcatc ggtttatccg cgtaaaacca
     2041 tcgtccgtat gtccgacttc aaatccaacg aatacgccaa cctggtcggc ggcagcgtat
     2101 acgaaccgca tgaagaaaac ccgatgttgg gcttccgtgg tgcggcgcgt tatgttgccg
     2161 agagcttcaa agactgtttc gccttggaat gcaaagcctt gaaacgcgtt cgtgacgaaa
     2221 tgggtctgac caacgtcgaa atcatgattc cgttcgtccg cactttgggc gaagccgaag
     2281 cagtggttaa ggcattgaaa gaaaacggct tggaacgcgg caaaaacggc ctgcgcctga
     2341 ttatgatgtg cgagctgccg agcaacgcgg tattggcgga acaattcctg caatacttcg
     2401 acggcttctc catcggctcg aacgacatga cccagctgac cctcggcctc gaccgagaca
     2461 gcggcttggt gtccgaatcg tttgacgaac gcaaccctgc cgtcaaagtg atgctgcatc
     2521 ttgccatctc cgcctgccgc aagcagaaca aatatgtcgg tatctgcggt caaggtccgt
     2581 ccgaccatcc ggactttgcc aaatggctgg ttggagaagg catcgaaagc gtgtctctga
     2641 acccggatac cgtcatcgaa acttggctgt atttggcgaa tgaattgaac aaataatcaa
     2701 ttcccatacc cccaagcctg aaaagcgcgg gggtattttt tccaagcagc tccgttcaga
     2761 cggcatttcc tgtcgatgcc ccgtccgcga taatatttga cacccacgcg ccgactgcct
     2821 acaattcccc cctctccgag caaccggcaa cagtcagctt cttctttcag acggcatcca
     2881 cccgtctttt cctttctatt ctatatatca ttgattatgc acgtctccga attacaaacc
     2941 ctgcacattt ccaaactctt agaattggcg gaagaacacg gcatcgaaaa cgccaaccga
     3001 ttccgcaaac aagacctcgt atttgccatc gtccgccaga tgatgaaaaa aggcgagggt
     3061 tttacctgct ccggcacgct cgaaatcctg cccgacggct tcggcttcct ccgcagcgcg
     3121 gacacgtcct atcttgccgg ccccgacgac atctatgtct cgcccactca aatccgccgc
     3181 ttcaacctgc atacgggcga caccatcgaa ggcagcgtgc gcgtccccaa agacaacgaa
     3241 cgctattttg ccttggtcag actggattcc atcaatggcg accacccgga agtatgccgc
     3301 cataaaatcc tgtttgaaaa cctgaccccg ctgtttccga ccgaacagtt gaagctggaa
     3361 cgcgacttaa agtccgaaga aaacctgacc ggacgcgcca tcgacctgat ttcgcccatc
     3421 ggcaaaggtc agcgcgccct cttggttgcc ccgcccaaaa tcggtaaaac cgtgatgctg
     3481 caaaacattg cccacgccgt taccgcaaac tatcctgaag tcgaactcat cgtcctcttg
     3541 attgacgaac gccccgaaga agtaaccgaa atgagccgtt ccgtccgagg tgaagtagtc
     3601 tcctccacct ttgacgaacc ggcgcaacgc cacgtccaag ttgccgaaat ggtgcttgaa
     3661 aaagccaagc gtatggtgga acacaaaaaa gacgtggtca tcctgctgga ttcgattacc
     3721 cgccttgccc gcgcctacaa taccgtcgtc cccgcctcgg gcaaaatcct gaccggcggt
     3781 gtcgatgcca acgcgctgca ccgccccaaa cgtttcttcg gtgcggcgcg caacgtggaa
     3841 gaaggcggtt cgctgaccat tatcgccacc gcattggttg aaaccggcag ccgtatggac
     3901 gatgtgattt acgaagaatt caaaggtacc ggcaatatgg aattgcacct cgaccgccgt
     3961 atggcggaaa aacgcctctt ccccgccatc aacatcaaca aatccggcac gcgccgcgaa
     4021 gagctgcttg tgccgaacga ccagttgcaa cgtatgtggt tactgcgcaa gttcctgcac
     4081 ccgatggacg aaatcgaagc taccgagttc ttaaacggaa aaatcaaagc atctaaaaat
     4141 aatgatgatt tctttgaact gatgcgcgga aaataaacgc gccgcccgca ttaatgcgaa
     4201 atgccgtctg aagcctgaaa atcgggtttc agacgacatt ttcattcgca cggccggcgc
     4261 agctcctccc ccccccccgc taacggcgca accgccggca gtgtccgtgt ccgcctgccg
     4321 aaggcgcggc ctttgcaaaa ccggctcgaa cgcatcccta ccggcaatga aaaccgatgc
     4381 gggaacttga ttcaaggttg cgccgaaccg cgcccatttt tgtataaatt tta
//
LOCUS       DAWXHA010000131         4329 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.131, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000131 DAWXHA010000000
VERSION     DAWXHA010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4329
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.131"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..686)
                     /locus_tag="AABD07_001883"
     CDS             complement(<1..686)
                     /locus_tag="AABD07_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HFB2356351.1"
                     /translation="MRNTVGLDISKLTFDATAIVGNAEYSAKFDNDSKGLNQFSDRLK
                     SLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAK
                     LIAQYCRLAKESELVKRQKPTDEQYRLLRMTAAYAQIKSECAAMKNRHHAAKDEEAAK
                     AYAEIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSK
                     FETSNKFAAFA"
     gene            733..1155
                     /locus_tag="AABD07_001884"
                     /pseudo
     CDS             733..1155
                     /locus_tag="AABD07_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
     gene            complement(1210..1665)
                     /locus_tag="AABD07_001885"
     CDS             complement(1210..1665)
                     /locus_tag="AABD07_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HFB2356352.1"
                     /translation="MNRRQFLGSAAAVSLASAASFARAHGHADYHHHHDMQPAAASAY
                     TAVRQTAAHCLDAGQVCLTHCLSLLTQGDTSMSDCAVAVRQMLALCGAVHDLAAQNSP
                     LTRDAAKVCLEACKQCAKACKEHSAHHAECKACYESCLDCIKECEKLAA"
     gene            complement(1921..3291)
                     /gene="ffh"
                     /locus_tag="AABD07_001886"
     CDS             complement(1921..3291)
                     /gene="ffh"
                     /locus_tag="AABD07_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HFB2356353.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVAGSLTPDQAFIGVVNQALVELMGKENKTLDLSVSPPAI
                     ILMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAVVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLNGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKAGRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRLAKGMKGMK
                     GMFPGL"
     gene            3511..4317
                     /locus_tag="AABD07_001887"
     CDS             3511..4317
                     /locus_tag="AABD07_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HFB2356354.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDFPFMLHIGTSLLAYGLFGIATLLSVLSLLLHRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
BASE COUNT          934 a         1072 c         1119 g         1204 t
ORIGIN      
        1 gcgaatgctg caaatttgtt tgatgtttca aatttcgaag atgttagatg atgaaacaat
       61 acggctgcgg tcattctgcc tattgccggt atggtttcaa gacgcttcac gccttccttg
      121 cagttaggct tctccgtctg ctcttttatc ttctccttta aaacttcaag ctgttcattc
      181 atggctttga tgatttccgc atatgctttg gccgcttctt catcttttgc cgcgtgatga
      241 cggtttttca ttgccgcgca ttcgcttttg atttgcgcgt atgctgcggt catccgtaaa
      301 agcctgtatt gctcgtccgt aggcttctgc ctctttacaa gctcgctttc tttcgccaac
      361 cggcaatact gcgctatcag ctttgcatcc tgtttgtctg ttttggttcg cttgaacctg
      421 ctttctgcat acttgcttat tttcagcgga ttcactacgt aaacgctgta atactgcgcg
      481 aagtagtcgg caacttcttc ataataattg ccggttgcct ccatgcagat atgcagattc
      541 tgacatccca agcttttcaa ccggtccgaa aactgattta aaccttttga atcgttgtca
      601 aactttgccg aatattcggc attgccgaca atggccgttg cgtcaaatgt cagcttggat
      661 atgtccaatc ctacggtgtt acgcatggga ttacccttat atattgcgtc cctaagaagg
      721 ggcgcaatat ataaggtgtg gcaatttgtc gaagacgcgc tgcgtgccgt cgtgcctgcc
      781 gacagttttg aaccgaccgc gcaaaaattg aagctgttta aggcgggcgc ggcaaccatt
      841 ttgttttatg aagatcaaaa tgtcgtcaaa ggtttgcagg agcagttcct tgcttatgcc
      901 gccaactttc ccgtttgggc ggaccaggcg aacgctatgg tacagtatgc cgtctggacg
      961 acacttgccg cggtcggtgc aggtgcaaat ctgcaacatt acaacccctt gcccgatgtg
     1021 gcgattgcta aagcgtggaa tattcccgaa aactggctgt tgcgcgcgca aatggttatc
     1081 ggcggtattg aaggggcggc aggtgaaaag gtctttgaac ccgttgcgga acgtttgaaa
     1141 gtgttcggcg cataatttcg cggtcaaaaa aatgccgtct gaaccccgtt cagacggcat
     1201 ttttcagtat caggcggcga gtttttcgca ttctttgata cagtcgaggc aggactcgta
     1261 acaggctttg cattccgcat ggtgggcgga gtgttcttta caggctttgg cacactgttt
     1321 gcacgcttcg aggcacactt ttgccgcgtc gcgtgtcaga ggggaatttt gtgcggcaag
     1381 gtcgtgcacc gcgccgcata aggcaagcat ctggcgcacg gcaaccgcac agtcggacat
     1441 agacgtgtcg ccctgagtga gcagggacag gcagtgggtc aggcaaacct gtccggcatc
     1501 cagacagtgt gcggcagttt ggcggacggc ggtgtaggcg gatgcggcgg caggctgcat
     1561 atcgtgatga tggtggtagt cggcgtgtcc gtgcgcacgc gcgaaagagg cggcggaagc
     1621 caaagagacg gcagcggcgc tgcccaaaaa ttgacgacgg ttcatgattt tttcctttat
     1681 gtttcaacat gcgggtccgg tataaggtac acacttacca tactgccctg gccggatcgg
     1741 tacgattttc tgaataattg cttgattttg caggtgtgaa attgtcgcac gagcaggcat
     1801 gttttagcta ttcggaaatt cgaggaaggg tgcatcaacc tgttttgaaa tgatgcgcag
     1861 acatggtaac agacaaaaag ccgtctgaaa atcgttttag acggcttttg ttttcaaaca
     1921 ttaaagaccg ggaaacattc ccttcattcc cttcatgcct ttggccaagc gcatcagttt
     1981 gcccaaaccg ttgccgctga acatcttcat catctgctgc atttgttcaa actgtttgag
     2041 caatttgttc acttcctgca cggtcgtgcc cgcgcccatc gcaatacggc gtttgcggcc
     2101 ggctttgagc agggcagggt tggcgcgttc tttaggggtc atcgagttga tgatggcttc
     2161 tactttgccc atcgcttttt cagccgtacc ttcggggatt tgtttcgata tttgacccag
     2221 ttcgcccggc attttcgaca tcaggttttc caaaccgccc atattgcgca tttgctggat
     2281 ttgttcttta aaatcattga ggtcaaagcc tttgcctttt tgcagctttt tcgccatttt
     2341 ggcggcggct tcttcatcaa tacctttttg aacgtcttca atcagggtca atacgtcgcc
     2401 catgccgagg atacggctgg caagacggtc ggggtggaaa ggttcgaggc cgttgatttt
     2461 ctcgccgacg ccgataaatt taatcggttt gccggttaca tggcgtacgg acaatgccgc
     2521 accgccgcgc gagtcgccgt ccatcttggt caatacgacg ccgttcagcg gcagggcttc
     2581 attaaatgcc tgagcggtat ttaccgcatc ctgacccagc atggcatcga taacgaacaa
     2641 agtttcaacc gggttgacca ccgcatgaag cgctttgatt tcgttcatca tctcttcatc
     2701 gattgccaaa cggccggcgg tatcgaccat caatacatcg taaaaatgtt ttttggcgta
     2761 atcaacggcg gcagttgcaa tctcaaccgg tttttggttg gtatcggatg ggaaaaaatc
     2821 tacgccgacc tgttcggcca acaggcgcag ctgttcaatc gcggcagggc ggtaaacgtc
     2881 ggcggatacc accaaaactt ttttcttctg atcgtttttc agcaggcggg cgagtttgcc
     2941 gacggttgtt gtcttaccgg caccctgcaa accggccatc aaaatgatgg caggcggtga
     3001 aaccgataaa tccagtgttt tgttttcctt gcccatcagt tcgactaagg cttggttgac
     3061 cacgccgata aaggcttggt caggcgtcag gctgcccgcc acttcctgac cgagggcctt
     3121 ttctttgacg ttgttgacga actctttgac gacaggcagg gcgacatccg cctcaagcag
     3181 ggcgagtcgg acttcgcgca aggcttcttt aatattgtct tcggtcagtt tggcctgccc
     3241 ccggatgttt ttgaagacat tgctgaagcg gccggttaaa ttgtctaaca tactggtcct
     3301 tggtctgaat aagaatagct tgccccatca ggggcattct ttgttaaaat aaaatcaaaa
     3361 taatttgatg cggcttgtgt gccggacagc atatcggcaa atccgtcaag gcttgcccga
     3421 aacggggatt ttacaattcc aacgttaaaa gttccaatat ttcataagcg gccgcatacg
     3481 gcgcaacagt atagatagag aaagtccacc atgccgacag ttttcatctt tttgacggcg
     3541 gtttacgcag gattgggtgc atttgcatgg cactgccaac agcaggggcg cggccgggat
     3601 tacccgtgga agacggaatt gccggttttg ggcgcggcat tgaccgtcca cggcgcggca
     3661 ctgctgatgc cggtcattca agacaaaatc atcattatgg gcttcgggta ttccggcagc
     3721 ctgattgttt ggatgatgct gtttatttat tttgccggca gcttttttta tccgctgcgc
     3781 ggagtgcagt tgctgctgta tccttgcgcc gcactgatgc tgctgtcagg tttggttttc
     3841 ccgggaaaat tctcgggata tgaaattacc gactttccct ttatgctgca tatcggcaca
     3901 tcactgcttg catacgggct gttcggcatc gcaacattat tgtccgtttt gagcttgctg
     3961 ctgcaccgga gcctgcaccg cagaaacttc tccaagctcg caggattcct gccgtcgctg
     4021 ctcagtttgg aaaaactcat gttccaggcc atgtgggcag gtttcatcct gctgacctat
     4081 tccgtcgtca gcggcacatt ctttgccgaa gccgtattcg gcaaacccat gacatttacc
     4141 cataaaaccg tattcggcat attgtcatgg ctgatttacg gaggactgct gctcaaacac
     4201 agcatgaccg catggcgcgg caaaaaagcc gccgtgtgga ccatcatcgg atttgtcagc
     4261 cttatgattg cctatatggg cagcaagttc gtattggaaa tcattctgaa aagataagaa
     4321 gagccaaca
//
LOCUS       DAWXHA010000132         4228 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.132, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000132 DAWXHA010000000
VERSION     DAWXHA010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4228
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.132"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            37..228
                     /locus_tag="AABD07_001888"
     CDS             37..228
                     /locus_tag="AABD07_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HFB2356355.1"
                     /translation="MRVLAGMGNNLNQIAKALNTAAKVGTLGNVEALKATTELAALER
                     SLNSLRDFLAKEKNGWQSQ"
     gene            213..845
                     /locus_tag="AABD07_001889"
     CDS             213..845
                     /locus_tag="AABD07_001889"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HFB2356356.1"
                     /translation="MAVPMIVQFFNRGKGGGSGPIDYLLGKDRDREEARLLRGDPEET
                     AALINSSDYAKKYTAGCLSFEESNIPAEQKHALMDSFEECIFAGLDKDQYNCLWVEHR
                     DKGRLELNFVIPNIELLSGKRLQPYYYYAADRGRVDAWRTMQNLTHGYSDPDDPAKRQ
                     SMTQAKDLPRNTQEAAQSITEHHRRLRSPSPIRQAKKPRRRAGNAGKGRF"
     gene            947..1588
                     /locus_tag="AABD07_001890"
     CDS             947..1588
                     /locus_tag="AABD07_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cryptic plasmid protein B"
                     /protein_id="HFB2356357.1"
                     /translation="MSKISDLAKTFEQTSRTEAASIEQQTKADLETLRKNINEALKQS
                     EQKITADINARQLRMSKAVFKPYLWSLLGISAAGLIVIAGLFIAIWSVKNELDDLKQQ
                     RAEAERTLDLLETKTKGLTLENCPVENSKATRVCVATEKRMLDALAELESNHAAIEQR
                     MMKALTHLGERLAELEQENTSLAQQLASLAAELERQSEIRQRQSEILNQPAKR"
     gene            1620..1889
                     /locus_tag="AABD07_001891"
     CDS             1620..1889
                     /locus_tag="AABD07_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cryptic plasmid protein A"
                     /protein_id="HFB2356358.1"
                     /translation="MGNEPMITENERDRRTAAWLIETYGAEAVAEAETRIAGARKPYP
                     SNIAKVLGASLPEALKRTENAAARQKLAGLRRMLDGKAVKTSQDL"
     gene            complement(1867..2145)
                     /locus_tag="AABD07_001892"
     CDS             complement(1867..2145)
                     /locus_tag="AABD07_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease VapD"
                     /protein_id="HFB2356359.1"
                     /translation="MYAISFDLVVADTAQNHPKGISQAYADIGYTLRKFGFTRIQGSL
                     YTCQNEDMANLFSAINELKALPWFPSSVRDIRAFRIEQWSDFTSLVKS"
     gene            complement(2145..2330)
                     /locus_tag="AABD07_001893"
     CDS             complement(2145..2330)
                     /locus_tag="AABD07_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356360.1"
                     /translation="MQTTIPTGSIRTFGDYGVMYIVGTPAEQLPDGDWLVNIELPESG
                     EHTQYKLSHIVQDPKAA"
     gene            complement(2333..2578)
                     /locus_tag="AABD07_001894"
     CDS             complement(2333..2578)
                     /locus_tag="AABD07_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356361.1"
                     /translation="MTRYAINRDALYSAFKDFLYSEINANPALKSATVDDLADIVLAK
                     KWRIFLPDGIKRTTAEKAAQRVLYMTNQPENQTQQEN"
     gene            complement(2575..2817)
                     /locus_tag="AABD07_001895"
     CDS             complement(2575..2817)
                     /locus_tag="AABD07_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HFB2356362.1"
                     /translation="MAYPKLKTTKRDVTAKELAKRFGCSTRTVFRAWSQSRADYLAEN
                     SISRDKPWEHFGISRATWYRRGKPMPSETDNQSETA"
     gene            complement(2821..3603)
                     /locus_tag="AABD07_001896"
     CDS             complement(2821..3603)
                     /locus_tag="AABD07_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replicase"
                     /protein_id="HFB2356363.1"
                     /translation="MLVRSYAAAIKRRYIQVNPPHLRVFMLFDLDYEGAGLAWEDNNL
                     PMPAWAAINRENGGAHLAYALSAPVLTAEYGGRQKALRYLAALEAAYKAKLRGDVGFV
                     SLITKNPEHPHWLTLRGVPDAIRGYDLEYLADFVDLDKFKPYIGRSNVEAVGLSRNCT
                     VFNLVSRWAHKNVLAFKQQGYTVQGWLKEVHYQCMRVNGDFPVPMWEKEVKCISKSIA
                     NWVWYKFDIAASNRRFSELQAHRNSLRKTTINAGRTKIITEL"
     gene            complement(3773..4171)
                     /locus_tag="AABD07_001897"
     CDS             complement(3773..4171)
                     /locus_tag="AABD07_001897"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356364.1"
                     /translation="MGLLSGQSLKLGRADSDDELLCSLFGGTRTCQKGKIPLFLTAFC
                     SKKRHFITAFRRYSMKNSGKNTHAALSELVSCFPQNAALLAGLGRAAALQALPLRLLA
                     SLNCGLENFEIRTPIGLLSDYGYFDIVVSS"
BASE COUNT         1150 a         1046 c         1135 g          897 t
ORIGIN      
        1 aaaaaaaccg tcaaattcca attcccgccc gaagtcgtgc gcgtccttgc aggcatgggt
       61 aacaacctga accaaatagc caaggccctg aacaccgccg caaaggtcgg cacgttgggc
      121 aatgtggaag cactcaaggc gacgaccgag ctggcagcgt tggaacgttc cttaaattcc
      181 ctacgggatt ttttagccaa agaaaagaac ggatggcagt cccaatgatt gtgcagtttt
      241 tcaatagggg gaaaggcggc gggagtggtc cgatagacta tcttctaggc aaagaccgcg
      301 accgagaaga agccagatta ttacgcggcg accccgaaga aaccgccgcc ctgataaaca
      361 gcagcgatta cgccaagaaa tacaccgccg gctgcctgag ctttgaagaa agcaacatcc
      421 ccgccgaaca gaaacacgcc ctgatggaca gcttcgaaga gtgtattttt gcaggcttgg
      481 acaaagacca atacaactgc ctatgggtag aacaccgaga caaagggcgt ttggaactca
      541 acttcgtgat accgaacatc gagcttttga gcggaaagcg gttacagccc tactactact
      601 acgccgccga cagaggaaga gtggacgcat ggcgcaccat gcagaacctg acgcacggat
      661 acagcgaccc agacgacccc gccaaacggc agagcatgac ccaagccaaa gacctgccga
      721 gaaacacgca ggaagccgca cagagcatca cagagcatca cagacggctt agaagcccta
      781 gccctatcag gcaagctaaa aagccgcgca gacgtgctgg aaacgctgga aaaggtaggt
      841 tttgaaatat cacgagcgac catcagcagc atcagcagca tcagcagcat cagcatcaag
      901 aacccggacc caaaagggcg caacatccga ctgaaaggcg cactgtatga gcaagatttc
      961 cgatttggcg aagaccttcg agcagacatc acgcaccgaa gccgccagca tagagcaaca
     1021 aacgaaagca gacttagaga cgttacggaa aaatatcaac gaggcattga agcaaagcga
     1081 gcagaaaata accgccgata taaacgcccg gcagttacgc atgagcaagg cagtattcaa
     1141 gccctatctg tggagcttgc taggtatatc ggcggcaggg ttgatagtca tagcagggct
     1201 gttcatagcg atatggagcg tcaagaacga gctggacgac ttgaaacagc agagagccga
     1261 agcagagcgc accctagacc tgttggaaac caagaccaaa ggtttgacac tggaaaattg
     1321 cccagtcgag aacagcaaag caacgcgggt atgcgtagcg accgagaagc gaatgctgga
     1381 cgcgttagcg gaattagaga gcaatcacgc agcaatcgag cagcgaatga tgaaagcctt
     1441 aacgcacttg ggcgaaaggt tggcagagct agagcaggaa aacacgagtt tagcgcagca
     1501 gctagcgagc ttggcagccg agttagagcg gcagagcgaa atacggcaac ggcagagcga
     1561 aatcttgaat caaccagcca aacgataagc caacgataca aacgaaccca aagcagggga
     1621 tggggaatga gccgatgatt accgagaacg aacgcgacag gcgaacagcc gcatggctga
     1681 tagagaccta cggggcagaa gccgtagcgg aagcagaaac ccgcattgcg ggcgcgagaa
     1741 agccctatcc gagcaatatc gccaaagtat tgggggctag cctacccgaa gccctaaaac
     1801 gcacagaaaa cgccgcagcg cgccaaaaac tggcagggct gcggcggatg ttggacggta
     1861 aggcagttaa gacttcacaa gacttgtgaa atcagaccac tgctcaatgc ggaacgcccg
     1921 aatatcgcgg acagaagacg gaaaccaagg cagagctttt agctcgttga tggctgaaaa
     1981 caggttagcc atatcttcgt tttggcaggt gtacaaactt ccctgaatgc gggtaaagcc
     2041 gaatttccgc agggtgtatc caatatccgc gtaggcttgg gaaatgcctt tcggatggtt
     2101 ttgagcggta tcggcaacca ccaaatcaaa agaaatcgcg tacattaggc agcctttggg
     2161 tcttgaacga tgtgggacag tttgtattgc gtgtgttcgc cgctttccgg cagttcaata
     2221 tttacgagcc aatcgccgtc cggaagctgt tcggcaggcg tgccgacgat gtacatcacg
     2281 ccgtaatcgc caaaggtgcg gattgaaccg gtggggatag tggtttgcat ggttagttct
     2341 cctgttgggt ttggttttca ggctggtttg tcatgtacaa aacccgttgg gcagcttttt
     2401 cggctgttgt gcgtttgatg ccgtcaggca gaaaaattct ccattttttg gctagaacta
     2461 tatctgcaag atcatcaacc gttgcgcttt tcaaagcagg atttgcgtta atttccgaat
     2521 acagaaaatc tttgaatgcc gagtacagag catcgcggtt tattgcgtat cttgtcatgc
     2581 tgtttcgctt tggttgtcag tttcagacgg cataggcttg ccgcgcctgt accaagtggc
     2641 gcgggaaatg ccgaagtgtt cccacggttt atcgcggctg atagagtttt cggctaggta
     2701 gtcggcgcgg gattgcgacc atgcccgaaa aacggttctt gtggaacagc cgaagcgttt
     2761 tgccagttct ttagccgtaa cgtctcgctt ggtggttttc agttttggat aggccatatt
     2821 tcaaagctcc gtgatgattt ttgttctgcc tgcattgatg gttgttttcc gcaaactatt
     2881 ccgatgagcc tgcaattccg aaaaccgtcg attgctggct gcaatatcaa acttgtacca
     2941 aacccagtta gcgattgatt tggagataca tttcacttct ttttcccaca tcgggacagg
     3001 gaaatcccca tttacccgca tacactggta atgcacttct ttcagccagc cttgcaccgt
     3061 gtagccctgc tgtttgaacg ccaacacgtt tttgtgcgcc caacggctca caaggttaaa
     3121 caccgtgcaa tttctgctta atccgaccgc ttccacgtta gagcgaccga tatagggctt
     3181 aaacttgtct aaatccacga aatccgcaag atactccaaa tcgtagcccc tgattgcgtc
     3241 aggaacgccg cgcagcgtca gccaatgcgg atgttcggga tttttcgtaa tcagcgatac
     3301 aaagcccaca tcaccgcgca atttcgcctt atatgctgct tcaagtgcag caagatagcg
     3361 cagggctttt tgtctcccac cgtattccgc cgtcagcaca ggcgcggaaa gcgcataggc
     3421 aaggtgtgcg ccgccgtttt ccctgttgat tgccgcccaa gcaggcatag gcagattatt
     3481 gtcttcccaa gccaaccccg ccccttcgta atccaagtca aagagcataa acacacgcag
     3541 atgcggcgga ttgacttgga tgtagcggcg tttgatggcg gcagcgtaag agcgcaccag
     3601 cataggcgct tctttgaaat ctttgcagta tggcttgtgt gggatacgtt cttgcaagaa
     3661 gaggtcgggt tgggtgtata attggctcat gttgtatctc gaaacccccg tgcagattgg
     3721 cgtttggcgg gggttttgct ttgtctaaga tttgcagatt gtatgcttgt ttttaagatg
     3781 atacaactat gtcaaaataa ccataatcag ataacagccc gataggggtt cttatttcaa
     3841 aattttccaa tccgcaattt agcgaagcca gcaggcgaag cggtaaagct tggagcgcag
     3901 cagcgcgacc taagccggcc agcagggcgg cgttttgggg gaaacatgaa accagttccg
     3961 acagggcggc gtgcgtgttc ttcccggagt tcttcatgga gtatcggcga aatgccgtga
     4021 tgaaatgccg tttttttgag cagaaagcag tcaaaaacag gggtattttg cccttttgac
     4081 aggttcgagt gccgccgaaa agcgaacaaa gcaactcatc atccgagtca gcccgaccga
     4141 gtttgagact ttgacccgac agaagaccca tccgaattta gcccgctaca ttcgggagcg
     4201 ggttttggaa gatggcaaag catccgac
//
LOCUS       DAWXHA010000133         4171 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.133, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000133 DAWXHA010000000
VERSION     DAWXHA010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4171
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.133"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            197..673
                     /locus_tag="AABD07_001898"
     CDS             197..673
                     /locus_tag="AABD07_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356365.1"
                     /translation="MEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQ
                     HEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWW
                     AKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS"
     gene            670..957
                     /locus_tag="AABD07_001899"
     CDS             670..957
                     /locus_tag="AABD07_001899"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356366.1"
                     /translation="MSYLDQPLKHGYGNGNGSGNGSGYGDGYGNGYGNGYGGVDGGGS
                     GSGYGNGNGDGDGSGNGDGDGNGNGSGNGSGNGDGDGNGNGSGNGSGYGNG"
     gene            1098..1430
                     /locus_tag="AABD07_001900"
     CDS             1098..1430
                     /locus_tag="AABD07_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356367.1"
                     /translation="MKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGL
                     IEIAKKSAREFVRDADGEPYSQEDWETYLTEDASRVGKDTEAAMNYAIDEREWFALAE
                     NIGRLANS"
     gene            1583..1858
                     /locus_tag="AABD07_001901"
     CDS             1583..1858
                     /locus_tag="AABD07_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356368.1"
                     /translation="MKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAM
                     RMALAQKQAEVAELSAEIWLEERHLNAEEEAGCRRVHGDAEVPEGKE"
     gene            2085..2771
                     /locus_tag="AABD07_001902"
     CDS             2085..2771
                     /locus_tag="AABD07_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356369.1"
                     /translation="MSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKR
                     QHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEE
                     RDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFAFDLS
                     DPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGRTEHPQGNAAPA
                     EDIEDDIPFN"
     gene            2911..3093
                     /locus_tag="AABD07_001903"
     CDS             2911..3093
                     /locus_tag="AABD07_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356370.1"
                     /translation="MANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAI
                     HAALGEAVAEYEGGAQ"
     gene            3090..3581
                     /locus_tag="AABD07_001904"
     CDS             3090..3581
                     /locus_tag="AABD07_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HFB2356371.1"
                     /translation="MTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQS
                     VIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGT
                     FKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNL
                     QIR"
     gene            3633..3848
                     /locus_tag="AABD07_001905"
     CDS             3633..3848
                     /locus_tag="AABD07_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356372.1"
                     /translation="MSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADT
                     SLEFLKDVINYGISDLKNVIEVFEDCV"
     gene            3959..>4171
                     /locus_tag="AABD07_001906"
     CDS             3959..>4171
                     /locus_tag="AABD07_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356373.1"
                     /translation="MQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRL
                     SARSKAQKENIARMLSGAKVSEDEALT"
BASE COUNT         1258 a         1036 c         1198 g          679 t
ORIGIN      
        1 cgagggcaaa ggacgggcaa agccttttat tgaaagttgg tgaaatctgc cgcgacgcag
       61 cagcgacatg gaccactaga aaaagcgaaa gcctcaatca caccgccttc acttttacag
      121 tgaaaaaaga cggcttaaaa gagaaggtaa tgattgtttt gtaaagaaac caaccccacc
      181 ccgaaaggaa acaaaaatgg aagcaaataa atttgaagtg aaaagtttgt cagaccttat
      241 aaaagtcttt gcaggcattg ctgccgattt cgaagcggca atgggtgtaa aacgcgccga
      301 catttcaacc gaatttgacg aaccgcaaca tgagccgcaa ccgccggtaa cagttgccga
      361 gcaaaaaggt atcaacgact ttgccatcgg caaggaagtc atcatccgca cttattcggc
      421 aggcgtttgg tttggtgtgt tgaaacaaaa agcaggcaat gaagtgattc tgacaaaagc
      481 gcgccgaatg tacagctggt gggcaaagga atcaatcagc ctgtcaggtg tcgcacgaca
      541 cggcatcagg caagacggca gccaaatttg cggcgagctt gattccgtat ggctcgaggc
      601 gattgagatt atcccagtaa caggcggcgc ggctgaatca atccgcaccg cgctggaggt
      661 cgcccagtca tgagttatct agatcaacca ttgaagcacg gctacggcaa cggcaacggt
      721 agcggcaacg gtagcggcta tggcgacggc tacggcaacg gctacggcaa cggctacggc
      781 ggcgtcgacg gcggcggcag cggcagcggc tacggcaacg gcaacggcga cggcgacggc
      841 agcggcaacg gcgacggcga cggcaacggc aacggtagcg gcaacggtag cggcaacggc
      901 gacggcgacg gcaacggcaa cggtagcggc aacggtagcg gctatggcaa cggctaaacc
      961 ttaaaaccgc ccgaagctat atctgccaag ccggggatag cacaaagcga tgaagtatcg
     1021 aacttcaaag cggggcaacg gcacggcgaa acagtgaatg ctgcgggcgg ttttctcaaa
     1081 cggaaaggac gaaggcggtg aaatattacg gcacggcggc ttacggcagc cccgattggg
     1141 ggatggaaag atattacgcg cgggaggata tgcggcaggc tttggacggt tgggaggcgg
     1201 aaaaccgaat cctgcacgaa tccgggttga ttgagattgc caaaaaatcg gcgcgggagt
     1261 ttgtccgcga tgcggacggc gaaccttaca gccaggagga ttgggaaacg taccttacgg
     1321 aagatgcttc ccgtgtcggt aaagataccg aagccgcgat gaactacgcc atagacgagc
     1381 gggaatggtt cgcgctggcg gagaacatcg gcaggctggc aaattcatag cgggcatagg
     1441 aatgccgcgc cgtcagccgg ggagtgggcg cggcggcggt ttttgtagat tttagccgca
     1501 gataaccctg acggcgcacg gtccgtacca tccttagcgg acgcggtgcg caattaaaac
     1561 cttttaaatt aaggaaatag aaatgaagac aaggaatatt gcgtttaagt tcgcggtatt
     1621 ggcggcggta ttggcggcgg gctatgcctt cggattcgcc aagggaggcg gaagccgtac
     1681 ggcaaaggga aaacccgccg gtattgcggc aatgcgcatg gcgttggctc aaaagcaggc
     1741 ggaagttgcg gaattgagcg ccgagatttg gctggaagag cggcatctga atgcggaaga
     1801 agaagccggt tgccggcggg tgcacggcga tgcggaagtg ccggagggta aagaatgagc
     1861 ttccatcccg aaaccgctta caccggcggc ggagaaacag agccgtacgg accaagcccc
     1921 gaagaaatca aataccggca aagcccggaa accgccgaaa cacggcggat gaccgaaaaa
     1981 caggcagaag gccacattaa aagcattatc agataacgcc gccgcgcaag gcataaaaca
     2041 gcgcgagacc gatagacgaa acgaccttta acaggagacc gaaaatgtca ttgattttaa
     2101 gtgtgaaaga cgaaagcaat ttcaaaccat gcccggcagg cagccatcac gccacctgca
     2161 tccgcatcat cgatttgggt acgcagctcg tcgagtacca aaacgaacaa aagcggcagc
     2221 acaagatttt agtgcagtgg gaaatcgacc ctgaaggcga tccggaaatg ctgatgccgg
     2281 acggcaggcc ctacctcatc agccgccggt acaccgccag cctgcacagc aaaagccaac
     2341 tggcaacaga cctcaaaagc tggcgcggaa gggactttac accggaagaa cgcgacaact
     2401 tcgatttgcg caatattttg ggcaagccct gcctgttgag tatcgcccac caagaaagca
     2461 gcgacggcaa aaccacctat gccaacattt ccgccatcag caacaagatg aagagctaca
     2521 ccccgaaaca tccggacaac gccgtttttg ccttcgacct gtcagacccc gattgggcga
     2581 attacggcct cctgaacgag aaactgaggg agcagattgc caaaagcccg gaatatgccg
     2641 aagccgtaaa cggccgccaa ccgccggcgc cgccgcagaa acaggcccaa gcggcggaag
     2701 ggcggacgga acacccccaa ggcaatgccg cgcctgccga agacatcgag gacgacatcc
     2761 cttttaatta agcccgccgt cagggcgtaa aaccggacgg aaaaccgcaa acaaacgccg
     2821 cgccctacgg gcaggccccg cactctgaag cagtagtcga tttttagttt gcaactgctt
     2881 cggacggcaa cagagaaagg aaacaaaaaa atggcaaaca tcgacctgac ccaatgggac
     2941 gggaaaacca ttggcgccgc cgccaatccc gaacagggct acatcaacat caccatcggc
     3001 agcgacgacc tattcatcaa catcgaacag gcatacgcca tacacgccgc gcttggcgaa
     3061 gcggttgccg aatatgaggg aggggcacaa tgaccgccct cacactctac cggtgcgcgg
     3121 cagacgtaca ggcggcgctt gattactact tcgacagcga aaccgagcgc gaagacacgc
     3181 tggaagccgt tatcgggcag ttcgaggtca aagcgcaatc cgttatcgct tatattaaaa
     3241 accaagaaat cacggaaaaa atgcttgaag agcatatcgg gcggatgacc gggaagctca
     3301 aggcggcaaa agcgcggaat caaagcctga aagactactt ggcgcgcaat atgcaggcgg
     3361 cgggcattac cgaaatcaaa gcggacgacg gcacttttaa agcctcgttc cgcaaatccg
     3421 aagccgtcgt gatcttagac gaagcacaaa tccccgccga atttatgcgt gaggccgtca
     3481 aaaccgaacc ggacaaaacc gccatcagaa aagcgattga aagcggtcgg caagtagcag
     3541 gcgcgaagat tgaagggcgg aagaatttgc agattagata aaccgtagaa gatgttgacg
     3601 acagcatccc attttgagtt aaggagcaaa aaatgagcta tttggaagat gtaaaaaacg
     3661 cattaagggt aatagataac ttatgcaaag aagcattaaa agagcctgaa tcgttagagg
     3721 gttatataga cgaaattagg gataaagcag acgaagcgga tacctctttg gaatttctaa
     3781 aggatgtaat aaattatggt attagcgatt taaaaaatgt aattgaggtg tttgaagatt
     3841 gcgtttgata ttaatggaac aagacatgaa ctatcaattt aaattcggcg accccgtgag
     3901 agatacagct ttatgattgg gcattgagag aacggcatca aaaaatcgag aaaacaaaat
     3961 gcaaacagta gcaacaaaac cgacggcaaa acagatgctt gccgccaaac gcgcggcgaa
     4021 ggaatcaacg cggcaggaac gcgccgtcaa acgcgcggga acagtaaaaa acgttgaccg
     4081 gaaccggctg tccgcccggt caaaagcgca aaaagaaaac atcgcccgga tgttgtcggg
     4141 cgcaaaggta tcggaagacg aagccctgac g
//
LOCUS       DAWXHA010000134         4007 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.134, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000134 DAWXHA010000000
VERSION     DAWXHA010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4007
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.134"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            34..219
                     /locus_tag="AABD07_001907"
     CDS             34..219
                     /locus_tag="AABD07_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356374.1"
                     /translation="MKKGVHSATQNYRRSGAMPSERIFRSVLRLVGVSSDTVKRKFAG
                     AGLSYAGKAAGESLYCL"
     gene            335..1129
                     /locus_tag="AABD07_001908"
     CDS             335..1129
                     /locus_tag="AABD07_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HFB2356375.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYDLPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQVVAVSCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELVEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDTGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            1354..3957
                     /gene="pepN"
                     /locus_tag="AABD07_001909"
     CDS             1354..3957
                     /gene="pepN"
                     /locus_tag="AABD07_001909"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HFB2356376.1"
                     /translation="MSKTVRYLKDYQTPAYRILETELHFDIAEPQTVVKSRLTVEPQR
                     AGEPLVLDGSAKLLSVKINGAAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GEFSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRAGRA
                     VRRIENIRLLRQNQFPEDAGPTAHPVRPVSYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKVGLLNRNGEAAAFDYQGKRATEAVLLMT
                     EAEQAFPLEGVTEAVVPSLLRGFSAPVYLNYPYSDDDLLLLLAHDSDAFTCWEAAQTL
                     YRRAVAANLAALSDGIGLPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGT
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELDRQAAKQENQSYEYSPETADWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNCLLAQFADKFSDD
                     ALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAQD
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQELQCIRAQEGLSK
                     DVGEIVGKILG"
BASE COUNT          955 a         1110 c         1107 g          835 t
ORIGIN      
        1 tattcccctg ttttaaaaaa tatttggcaa ggtgtgaaaa aaggcgtaca ttccgctaca
       61 cagaattaca gacgcagcgg agcaatgccg tctgaaagga ttttccggtc agtcttgcgg
      121 ttggtcgggg tttcatcgga tacggtgaaa cgaaagtttg ccggcgcagg gttgagctac
      181 gcgggtaaag ccgcaggcga aagcctgtat tgtttgtgaa gcgtaaatct ctgatttgag
      241 gtattggggc aatcctgtgg gggttgcctc tttttttatc cgccttttaa tgacacaata
      301 ggcgcaagtc tgtttttgaa tgcaaggtac tgccatgaat acgattttgg ctttcgatat
      361 tgaaaccgta cccgatgtgc agggtatccg tacgttgtat gacttgccgt cttccctgcc
      421 ggatgacgaa gtggtgctgt tcgcgcagca gaaacgccgc gcacagaccg gcggcgattt
      481 tatgcagcac cacctccatc aggttgtggc ggtttcctgc tgtatgcgct gggggcagga
      541 caaggttcat gtcggcacca tcggcgagat ggacgatggc gaagaagtcg tgattgccaa
      601 gtttttcgaa ttggttgaaa aacatacgcc gcaactggtc agctggaacg gcggcggttt
      661 cgacctgccc gtactgcatt accgctccct gatatacggc atcaacgccg cgcgctattg
      721 ggatacgggc gacggcgatt tcggcgacag ccgcgatttc aagtggaaca actacatcag
      781 ccgttatcac caacgccact gcgatttgat ggatttgctc gcgctttacc agccgagggc
      841 gaatgtgccg ctggacgata tggcgaaact gtgcggcttt ccgggcaagc tgggtatgga
      901 cggcagcaag gtgtgggagg cgttccacgc gggcaggctg aaggaaatcc gcaattattg
      961 cgaaaccgat gccgtgaata cgtatttgat gtatctgcgt ttctgtctgg tcagcggcag
     1021 attcgacgcg gacgaatacg aaatggaaat caagcggatc agaaactatc tctccgccca
     1081 aacagaagac aaaccgcatt gggcagaatt tgtccaagcg tggaaataga aacctgctgt
     1141 ccgaaggcgg tacgcttgtg ccgccgtttc ggtttcagac ggcgtatggt ggattaaatt
     1201 caaaccggta cagccttgcc tctccttgcc ttactatctg tactgtctgc ggcttcgtcg
     1261 ccttgtcctg atttttgtta atccgcttta aaagctgtat ccgtgccgtc tgaagccttt
     1321 cccagtcaaa ccaaacaata ttgaaagaaa aaaatgagca aaaccgtccg ttatctgaaa
     1381 gattaccaaa cgcctgccta ccgcattctt gaaaccgaac tgcatttcga tattgccgaa
     1441 ccgcaaaccg tcgtgaagtc gcgtttgacg gtcgagccgc agagggcggg cgagccgctg
     1501 gtgttggacg gttcggcaaa acttttgtcc gtcaaaatca acggcgcggc ggcggattat
     1561 gtgttggaag gcgagacgct gacgattgca gacgtaccgt ccgaacgctt caccgtcgaa
     1621 gtggaaaccg aaatcctgcc ggcggaaaac aaatcgctga tggggctgta tgcttccggc
     1681 ggcaatctgt ttacccagtg cgagccggag ggcttccgca aaatcacgtt ctacatcgac
     1741 cgtccggatg tgatgtccaa gttcacgacc accatcgtcg cggacaaaaa acgctatccc
     1801 gttttgcttt ccaacggcaa caaaatcgac ggcggcgagt tttcagacgg ccgccattgg
     1861 gtgaaatggg aagacccgtt tgccaaaccg agttatctgt ttgctttggt cgcgggcgat
     1921 ttggcggtaa cggaagaccg tttcaccacc atgagcggca gaaacgtcaa aatcgagttt
     1981 tacaccaccg aagcggacaa gcccaaggtc ggctttgccg tggaatcgtt gaaaaacgcg
     2041 atgaagtggg acgaaacgcg cttcgggttg gaatatgact tggatatttt catggtcgtc
     2101 gccgtaggcg atttcaatat gggcgcgatg gaaaacaagg gtttgaacat ttttaacacc
     2161 aagttcgtcc tcgccgacag ccgcaccgcc accgataccg atttcgaagg cattgaatcc
     2221 gtggtcggac acgaatattt ccacaactgg acgggcaacc gcgtaacctg ccgcgactgg
     2281 ttccagcttt cgctgaagga agggctgacc gtgttccgcg accaagagtt ttccggcgac
     2341 cgcgccggcc gcgccgtgcg ccgcatcgag aacatccgcc tgctgcgcca gaaccagttc
     2401 cccgaagacg caggcccgac cgcccatccg gtgcgccccg tcagctatga ggagatgaac
     2461 aatttctaca ccatgaccgt ttatgaaaaa ggcgcggaag tggtgcggat gtatcatacc
     2521 ctgctcggcg aagagggctt ccaaaaaggc atgaagctat atttccaacg ccacgacgga
     2581 caggcagtga cctgcgacga tttccgcgcg gcgatggcgg atgcgaacgg catcaatctc
     2641 gaccagttcg ccttgtggta cagccaggcg ggcacgcccg ttttggaagc cgaaggccgt
     2701 ctgaaaaaca atgttttcga gttaaccatt aaacaaaccg tgccgcccac gcccgatatg
     2761 gcggacaaac agccgatgat gattcccgtc aaagtcgggc ttctgaaccg caacggcgaa
     2821 gcggcggcat tcgattatca gggcaaacgc gcaaccgaag ccgtgttgct gatgaccgaa
     2881 gccgaacagg ccttcccgct cgaaggtgta accgaagccg tcgttccctc gctgctgcgc
     2941 gggttcagcg cgccggtgta tctgaactat ccgtacagcg acgacgacct gctgctcctg
     3001 ctcgcccacg acagcgacgc tttcacgtgc tgggaagccg cccaaacgct ctaccgtcgc
     3061 gccgtcgccg ccaaccttgc cgcgctttca gacggcatcg ggttgccgaa acacgaaaaa
     3121 ctgcttgccg ccgtcgaaaa agtcatttca gacgacctct tggacaacgc cttcaaagcc
     3181 ctgcttttgg gcgtgccgtc cgaagccgaa ctgtgggacg gcacggaaaa catcgacccg
     3241 ctgcgctacc atcaggcgcg cgaagccttg ttggatacgc ttgccgtccg cttcctgccg
     3301 aaatggcacg aattggaccg tcaggcggcg aagcaggaaa accaaagtta cgaatacagc
     3361 cccgaaaccg ccgactggcg cacgctgcgc aacgtctgcc gcgccttcgt cctgcgcgcc
     3421 gaccccgcgc acatcgaaac tgttgccgaa aaatacggcg aaatggcgca aaacatgacc
     3481 cacgaatggg gcatcctgtc cgccgtcaac ggcaacgaaa gcgatacgcg caactgcctg
     3541 ctggcgcagt ttgccgacaa gttttcagac gacgcgctgg tgatggacaa atatttcgcc
     3601 cttatcggct caagccgccg cagcgacacc ctgcaacagg ttcaaaccgc cttgcagcat
     3661 ccgaaattca gtctcgaaaa ccccaacaaa gcccgttcgc tcatcggcag cttcagccgc
     3721 aacgtcccgc attttcacgc acaagacggc agcggctacc gcttcatcgc cgacaaagtc
     3781 atcgaaatcg accgcttcaa cccgcaggtc gccgcccgcc tggtgcaggc gttcaacctc
     3841 tgcaacaagc tcgagccgca ccgcaaaaac ttggtgaaac aagaattgca gtgcattcgg
     3901 gcgcaggaag gattgtcgaa agacgtgggc gaaatcgtcg gcaagatttt gggttgaggc
     3961 agtcaaacag aaaaaacaag ggtctgtacc agattagcag atatgtt
//
LOCUS       DAWXHA010000135         3714 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.135, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000135 DAWXHA010000000
VERSION     DAWXHA010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.135"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..309
                     /locus_tag="AABD07_001910"
     CDS             <1..309
                     /locus_tag="AABD07_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356377.1"
                     /translation="VWDDEEYWKLENALIEVRKKYPYPMDIPRDIVIGIGTIIDFLMV
                     QNWKLFEIKASPWLPKSVKINERYERFRVMLRYIFTDLDVEDWKFFYFPIQHSKGRLR
                     "
     gene            340..717
                     /locus_tag="AABD07_001911"
     CDS             340..717
                     /locus_tag="AABD07_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356378.1"
                     /translation="MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRRKYPYPMDIPRDIVIGIGTIIEFLMVPNWKLFEIKASPWLPDSVGINERYERLK
                     TMLRYIFTEKDIVNVQFDYYNKK"
     gene            848..1585
                     /locus_tag="AABD07_001912"
     CDS             848..1585
                     /locus_tag="AABD07_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pretoxin"
                     /protein_id="HFB2356379.1"
                     /translation="MVRTADGYKAIAHIQAGDRVLSKDEASGKTGYKPVTARYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGNRLFAESGKTQTVRNIVV
                     KPKPLKAYNLTVADWHTYFVKGNQAETEGVWVHNSCPYGGSNNLEKAKLRAERLSKND
                     RAGKDFTKAGKEAVIDLNRIQNNGQVKCANCGIETIPAKQSIKNISPTSNERQVDHVI
                     PKSKGGQGTPKNGQVLCRGCNIKKSNK"
     gene            1582..2001
                     /locus_tag="AABD07_001913"
     CDS             1582..2001
                     /locus_tag="AABD07_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4265 domain-containing protein"
                     /protein_id="HFB2356380.1"
                     /translation="MKSKLTVVYYDLESNIAEEILSGNIMPDGNFLIQEIPLFAPNLA
                     LNDIVAIEREDKMLFFDHLIKASGNTTINIVVLDHFPKDLLAAIEEHSGKIRKNGENY
                     LSVNFPPKKYNSDLKGILNRYEEANILSYREACLGFS"
     gene            2249..2521
                     /locus_tag="AABD07_001914"
     CDS             2249..2521
                     /locus_tag="AABD07_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356381.1"
                     /translation="MMSVKELFKVILDENKDFPIRTIHRTPMGILPKPVALSIVQYEN
                     DPGFYLFYLDETGQEQTDTYHDTLDSAFEQAEFEFGISKEEWMQSP"
     gene            2642..3187
                     /locus_tag="AABD07_001915"
     CDS             2642..3187
                     /locus_tag="AABD07_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFB2356382.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDNEVDNLSDMKRKPFAW"
BASE COUNT         1226 a          655 c          790 g         1043 t
ORIGIN      
        1 gtgtgggatg atgaagaata ttggaaattg gagaatgctt taatcgaggt tagaaaaaaa
       61 tatccttatc cgatggatat accaagggac atcgtgattg gaatcggtac cattattgat
      121 tttttaatgg ttcaaaattg gaaacttttt gaaattaaag cttctccttg gttgcctaaa
      181 agtgtcaaaa ttaatgagcg ttatgaaagg ttcagagtaa tgctccgtta tatttttact
      241 gatctagatg tagaggactg gaaatttttt tactttccaa tacaacatag taaaggtaga
      301 ttgagatgaa aagtttaatt atattggaga tacattatta tgtgtgagtt caaggatatt
      361 ataagaaacg ttccttattt tgaggggtat gacgaaaatt catttattgg caaatggtat
      421 gatgacgggg tgtgggatga tgaagaatat tggaagttgg agaatgattt aatcgaggtt
      481 aggagaaaat atccttatcc gatggatata ccaagggata tcgtgattgg aatcggtacc
      541 attattgagt ttttaatggt tccaaattgg aaactttttg aaattaaagc ttccccttgg
      601 ttacctgata gcgtgggaat taacgaacgt tatgaaaggc ttaaaacaat gctccgttat
      661 atttttaccg agaaagacat agtcaacgtg caatttgatt attacaacaa aaaatagcaa
      721 aacccggcaa tcaaaatgcc gtctgaaacc gtgtttaatt ttcaggcgac cttcccctta
      781 ttttaaacag gatattggga actaagttct tcaaaaatcc tacacctgct ctttccacgg
      841 cagcaccttg gtcagaacgg cagacggcta caaagccatc gcccatattc aagccggaga
      901 ccgcgtcctt tccaaggacg aggcaagcgg gaaaacagga tacaaacccg ttaccgcccg
      961 atacggtaat ccgtatcaag aaaccgttta cattaaagtt tcagacggca tcggcaacag
     1021 ccaaaccctg atttccaacc gcatccaccc gttctattcg gacggcaaat ggattaaggc
     1081 ggaagattta aaagcgggaa acaggctgtt tgccgaaagc ggcaaaaccc aaaccgtccg
     1141 caacatcgtt gtcaaaccaa aaccgctcaa agcctacaat ctgaccgttg ccgactggca
     1201 tacttacttc gtcaagggca atcaggcgga aacggaaggg gtttgggttc ataattcttg
     1261 tccgtatggc ggttcaaata atttagagaa agcaaaactt cgcgcagaac ggcttagtaa
     1321 aaacgatcgg gcaggaaaag actttactaa agcaggaaaa gaagccgtta ttgatttgaa
     1381 taggattcaa aataatggtc aagttaagtg cgctaattgc ggtattgaaa caattccagc
     1441 caaacaatct ataaaaaata tttctcctac ttcaaatgaa agacaagtag atcatgtcat
     1501 ccctaaatct aagggtggtc aaggtacacc taaaaacggg caggtattat gcagaggctg
     1561 caacattaag aagagtaaca aatgaaatcg aaacttactg tcgtctatta cgatttggaa
     1621 agcaatattg cagaagaaat actgtcagga aacataatgc ctgatggaaa ttttcttatt
     1681 caagagattc ctcttttcgc accgaatttg gctttaaacg acattgttgc catagaacgt
     1741 gaggataaga tgctgttttt cgaccacttg ataaaagctt caggaaatac cacgataaac
     1801 atcgttgttt tggatcattt cccaaaggat ttattggcag ccatagaaga acacagtggt
     1861 aaaatcagaa aaaatggaga gaattattta tcggttaatt ttccgcccaa aaaatataat
     1921 tctgatttaa aaggaatttt aaatagatat gaggaagcaa atatcctcag ctacagggaa
     1981 gcttgtttgg gcttctctta atcgatctat aagtaagaat ggattacgtt agattgtaaa
     2041 cctaacgatt aaaaggtcgt ctgaaaccgt gtttaatttt cagacgacct atttccttca
     2101 tttgaaacag gatattggga attaagtttt tcaaaaatcc tacacctgct ccttccacgg
     2161 cagcaccttg gtcaaaacgg cagacggcta caaagccaat ggacgtgtaa tagaaaatag
     2221 tgcggtaaca attattcggg attgaagaat gatgagtgta aaagaattat tcaaagtcat
     2281 cttagatgaa aataaagatt ttcctattag aacgattcat cgtaccccga tggggatact
     2341 tcccaaacct gttgctttaa gtattgttca atatgaaaat gacccgggat tttatttgtt
     2401 ttatttggat gagaccggtc aggaacaaac ggatacttat catgacacat tagattcggc
     2461 atttgaacag gctgaatttg aatttggaat cagcaaagag gaatggatgc aaagtcctta
     2521 gacggcaaaa tcaagatgcc gctttatttt tcagatggca tttccgtcaa taaaaaagtc
     2581 ggtattggag cccaaaacag cctacgtctt gccgggatag ggatgaaatc tttaagaaaa
     2641 aatgattata gttgaacatt tagaacatta tttgggtgaa atcgaaagcg gtataaaatg
     2701 cttggatcga cgttatcatc tcagcgtttc cgtcttccca tcacaaccat ataaaggggt
     2761 aactactttt tctactttag gcttgaatcg atatgacttg aactataaga gtaggtttga
     2821 attaattttt acctgttctg aagaatggaa taaagaaaat attgcagctt ttctatcagg
     2881 agtggctgaa tatttgattg acaatagaca acctatttta agaggtgaaa ttattcaatt
     2941 acccagggta attatcgaag gtagcaaaat ggatgcactg tatgtttccg ccccatttta
     3001 tttcgatgat gattttcagg tctgttatgg cgaacactac aatatcgttt tccctttgct
     3061 tgtccccttg tataaacagg aagcagaatt ggtggaaaag aaaggttgga atgcttttga
     3121 gcagttcttg ctggataatg aagttgacaa cctttcggat atgaagcgga aaccgtttgc
     3181 ttggtaaggg ctttcttaaa tttgattaaa ggtcgtctga aattaagctt gtttttcaga
     3241 tggtctttcc ttcatttgaa gcaggatatt gagaactgag ttcttcaaaa atcctacacc
     3301 tgctccttcc acggcagcac cttggtcaaa acggcagacg gctgaaaagc aaacaccgtc
     3361 cgtcgtgttg ccgtttgcgg atgagtacgg gtcaacccca atgccgccga aaccgtcgaa
     3421 gccgccttca acattgccac cgccaaagcc gcgaagttgg caaaaacggt aaaaccgggg
     3481 agataaaagc cgatggcagg aaagtaaatg tgaggataga cagtacggag gcagacctgc
     3541 tttatccggc agggcaataa gaaaacaaaa cttagatatg gaaaacgatt gtgaagatta
     3601 aaccattaca attttctaac aataatcaca gattttatgt ggacaaaatt tgtgttaccg
     3661 aacaagatgt gaacattttg gcatccgacc gaaattatga attaaatatt gaaa
//
LOCUS       DAWXHA010000136         3612 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.136, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000136 DAWXHA010000000
VERSION     DAWXHA010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3612
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.136"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(305..520)
                     /locus_tag="AABD07_001916"
     CDS             complement(305..520)
                     /locus_tag="AABD07_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356383.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVIYESSFPQKRESVFL"
     gene            complement(551..3319)
                     /locus_tag="AABD07_001917"
     CDS             complement(551..3319)
                     /locus_tag="AABD07_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFB2356384.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAERVPKDKKVFTDARAVSTRQDVFKSGENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSNKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRGVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQEGGLKFNSNSGKWER
                     DFQRPYWKTKWYQKYNDPQELQKYIEGHDKSWRENLAPQYDITPIDPSGLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNPYTNLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNAINYRFGGEYTGYYGSENEFKRAFGENSPAYKEHCDPSCGLYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFAGYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDILGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVGST
                     GLAYTIRHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADKTLCNGKYGGTSKSVLTNFARGRTF
                     LMTMSYKF"
BASE COUNT          828 a          891 c          907 g          986 t
ORIGIN      
        1 aaataaaaaa taacaacata aatcaattta ttacggtttt atttttattt ggtgttgacg
       61 ggcaacatat catctgcgcg gtaatgatga gattttaggt tgtgggattt atcggaaaaa
      121 cagaaacctc tccgccgcca ttctcacgaa agtgggaatc cggaaagcta aagccacagg
      181 aatttatcgg aaatggctga aatttatagt ggattaacaa aaatcaggac aaggcgacga
      241 agctgcagac agtacaaata gtacggcaag gcgaggcaac gccgtacctg tttttgttaa
      301 tccactataa aaaaactgat tcccgctttt gcgggaatga cgactcataa attacccgaa
      361 acaaccaaaa ataaccgaaa tcaaaaaccg gcttccctgc gtgggaatga aatggatttt
      421 tctttgagtt gccgatgcga taaaacggat tggcataggc ttgcggcagg atgatgcgtt
      481 tggggaaaca aatgccgtct gaagggcttt cagacggcat tgcagttttt ccacaaaacg
      541 cgggctgcct ttaaaacttg tagctcatcg tcatcaagaa ggtgcgtccg cgtgcgaaat
      601 tggtcaatac gcttttgctt gtgccgccgt atttgccgtt gcacaacgtt ttatcagcat
      661 tacacgttac gtcttcgtcc ttgtctttcg ggtcgaacga gctgtaataa cgctgcgttg
      721 ccgcatcatt gcccgcatcg agcggatcga tataacgcct gtcgaacagg tttttgactt
      781 cggcgcggaa aataaggttt ttcttcggct cgtaagcggc gtaaaaatca aaaatcaaag
      841 gctgtcgggc aagggtttcg gtttgtttga tggaacgctt gcccagttgc cggacattgc
      901 tggtatttcc cccgttggtg ccgtcgatat agcgttcttc agccgtcgcg cggatgctct
      961 tgccgaaata gcgcatcgcg ccgcccaaag tcagtttgtt gcccaaccag cgcgtaccga
     1021 cttccaaacg tccgtaatct cgcggcaggg cggaaaccct gctcagccca taaccttgtt
     1081 tgagttggtc ttctttggag gcattgttgg gcgattcgct cgcatcgctg aaattggtcg
     1141 gttgcgtgct tttttgatag gcgtaagaaa ggttggtgaa aaaacgccca taatcgtaat
     1201 tcagctccag ctcaaaaccg tgtttgtgca ctttgtcttt gaaattgcgg tgtcggatgg
     1261 tgtaggcaag cccggtgctg ccgacccagc tcggaatatc cccgttcaaa tcccaccatt
     1321 tcccgtaaac gttgtggatg tagttgtcaa tgcggctgcg gtagccgacc agtttcaatc
     1381 ctaatatatc atcttgtttt aacaatcctt ttttataggt attgaagcca aattgccaag
     1441 tgtttgcgcg ctctggtttt aaggcggtgt gaacgccgga gtcgccgatt tgggaaaaat
     1501 acatttcttg gatgttgggc atacggtgtg tgcgcgaata gccggcgaac ggcatgaaat
     1561 aatcgccgaa gtccgcacta atgctgaccg aatggttgtt ggcgcgcttt ttgccgtatt
     1621 ttttcaatac gggttcataa agcccgcagc tcgggtcgca atgttccttg tatgccggcg
     1681 agttttctcc gaatgcccgc ttaaattcgt tttccgagcc gtaatagccc gtatattcgc
     1741 cgccgaaacg gtagttgatt gcattggtgc tgtagtttaa gcggtaaatg tcttttttga
     1801 gcgcggcatc gaagtagaac gtgttgaaat attgactgcc ggccggttgg acgatggttg
     1861 atttttgggg cagcagccct ttatcgccct taaaccgccc caaataggaa taaagcccgt
     1921 tgtcctgatc cggaccgtcg aaaaacagcc ccaattcttc aggaaagcgg tttttgccgt
     1981 attcgttgtg gaaataattg aagcccaaag tggtttgcaa ctcggtttcg cggggcagcc
     2041 ggaaggtggc ggtgttgttg aggtcgagga tttttgcgtt gttgtaggtt tcaaaatcct
     2101 ttaaaagccc ccagcctgta aacttcgacc ctttcggata tttctgcctg cccgaattgt
     2161 aggctgcggt cagattgagg ttggtatacg ggttcaaaga caaaccgtaa ttgaattgat
     2221 aattgcggtt gatgattttg cggctgccga ttttggtgtt taaatcgcga aattgcgccg
     2281 tgtatttatt gaatacgccg tcgtattcca atttaaacag attacctgcc gactgctgct
     2341 tcaggccgga cggatcgatg ggggtgatgt cgtattgcgg cgccaggttt tcccgccagc
     2401 ttttgtcatg accttcgatg tatttttgca gttcttgggg gtcattgtat ttttgatacc
     2461 acttggtttt ccagtacggc ctttggaaat cccgctccca ttttccgctg ttggaattga
     2521 atttcaaccc gccttcttgt acaaaatatc gctgcttgcg ccgttccaga tattccgcgc
     2581 caaaatttcc gatgtgctgc ccgccgccgc ccacgcggta attttgcgcc acgccgcgcc
     2641 tgctgtgccc gtaaagcaca ccgacagatg ctccgctttc cagccatttg cgcgcaccta
     2701 tcgccgccat cgcattgcct ttgtttgaat tggtgccggt cagacctttt agcagcaggc
     2761 cgtaggtatt attgccctga acgacgtcat ccacgcctaa agtccgcaga ttcgccgaac
     2821 cggcaaggct gttgatgcct gccgagccgc tgaagctgcc tttgacgaca tccagtccgg
     2881 caataaaatt gctgtcgaca gatgcaccga attgagatga accgcctgcc ctgcccgcat
     2941 cggtagaagt cgaataaaag gtctgcgtga tgccgtccac catcgtattg acccgcccga
     3001 acccgctgtc gccgcgaata ttcaaagaca caatgcccga gcttttatct tgctgtgtaa
     3061 acgcaccggg tatgctgcgt acgatgttgt cgaggttttc gccggatttg aacacatcct
     3121 gacgggtcga tacggcacgc gcatcggtaa acactttttt gtctttcggt acgcgctcag
     3181 ccttgacgtg cacgtcttcc aaaacctgta tctgcgcctc gctgcccgcg cgccctgcat
     3241 cttctgcata actatgatga tatagcataa cacccataag ataaaaacaa atcggcttca
     3301 accggaaaga agatctcata ttttcctcaa caataaacaa tcaatccaac atgtctaccg
     3361 ttttcatcga atccgccctt tcgaccaccc gaccctacgc aaccgaaccg tcattcccac
     3421 ggaagtggga atctagaatc tcggggtttc agtcatttcc gatagattcc cgccgcgtcg
     3481 ggggtccgga ttcccgcctg cgcgggaatg acgggtttta agattgcggt gttgtcggac
     3541 gggtttcgag attgcggtgt tgtcgggaat gacggttcgg gtattttact gcgcccgccc
     3601 cgcgcccgta aa
//
LOCUS       DAWXHA010000137         3583 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.137, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000137 DAWXHA010000000
VERSION     DAWXHA010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3583
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.137"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(719..1108)
                     /locus_tag="AABD07_001918"
     CDS             complement(719..1108)
                     /locus_tag="AABD07_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HFB2356385.1"
                     /translation="MNPPEKLLTAENPALRQRAKAMRQEMSEAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHAEQAVYDHARTVYLNSLGFTVLRFWN
                     HEILQQTNDVLAEILRVLQELEKQPAR"
     gene            complement(1271..1650)
                     /locus_tag="AABD07_001919"
                     /pseudo
     CDS             complement(1271..1650)
                     /locus_tag="AABD07_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779337.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(1704..2837)
                     /gene="carA"
                     /locus_tag="AABD07_001920"
     CDS             complement(1704..2837)
                     /gene="carA"
                     /locus_tag="AABD07_001920"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HFB2356386.1"
                     /translation="MNTPALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNAGTNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYL
                     VRNETVAIADIDTRRLTMLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAEDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKQA"
BASE COUNT          752 a          917 c         1006 g          908 t
ORIGIN      
        1 agggagagag gacgggtcgg ctgttggggt tgaggtttgc tgcaaggaaa acaggttgtg
       61 caggctgctt tttatttttc agacgacctg aaacaacagc tgcaaatcta agttgccttt
      121 caaatcgcct gcaaccgaaa aatctgccga aacccactcc ctcccccgtg ggggagggcc
      181 ggggagaggg cattctccaa gttgcggcaa tctttcccaa cagcttaacc gccccaatac
      241 aagccttgcg gcttgttgcc ctctctccag ccctctccca cggggagaga ggacggggag
      301 gctgttggaa ttaagggttt tgtaaactaa tcaggttgtg caggctgctt tttgcttttc
      361 agacgacctg aaacaacagc tgcaaatcta agttgccttt caaatcgcct gcaaccgaaa
      421 aatctgccga aacccactcc ctcccctgtg ggggagggct ggggagaggg cattctccga
      481 atggtggcaa tctttcctaa taccttcgcc gcccaaatac aagccttgcg gcttgttgcc
      541 ctctctccag ctctctccca cagggagaga ggacgggtcg gctgttgggg ttgaggtttg
      601 ctgcaaggaa aacaggttat tcaggttgct tttttgcttt tcagacgacc tttttaaacg
      661 cttaattcag ttaattttac cttatttttt tcaaaatcta atcaaaatca accgtttgct
      721 accgtgctgg ctgcttttcc aattcctgca atacgcgcag gatttccgcc agtacatcgt
      781 ttgtctgctg caaaatttcg tgattccaaa aacgcagcac ggtaaagccc aagctgttga
      841 gatataccgt ccgcgcgtgg tcgtatacgg cttgttccgc gtgctgcccg ccgtctgctt
      901 cgacaatcag cttgggcgtt acgcacataa aatcaacaat ataattcccc atcggctgct
      961 gtcggcggaa tttatagccg ttcagacggc ctgcccgcag gtgttgccac aattttgctt
     1021 ccgcctcgct catttcttga cgcatggctt tggcgcgttg gcgcagggcg gggttttcgg
     1081 cggtcaatag tttctcgggc gggttcattt ttgttatcgg gttgctgttt gtgtaagcct
     1141 tacagcttgt tgccctctct ctaactcttt cccacaggga gagaggacgg gtcggctgtt
     1201 ggggttaaag gggctgcaag gaaaacagct tgtgcaggct gttttttatt ttgcataatc
     1261 cgtctgaaaa ttaataactg ctgatttcca gcaggttgcc atcgggatcg cgcaggtaaa
     1321 ccgattggat tttgcccatt gcgcctgtgc gcgctatgat gccgcttaaa ggtttgatgc
     1381 cgtgtacgga taattcctgt aaaaccgttt ccagtggggc gtatcggtca gcaggcataa
     1441 atccgctgtg ccgcaggcgg cgtgttgcgc gttaggctga atttccgcac cgcgcccgtg
     1501 taggttgatt ttctgactgc caaacaacaa agctttacgg ttgttgccaa atgaaacttc
     1561 ttccatgccc aaaacttgtg tgtaaaacgc gatggttcgg tcaatgtcgg caacagtcag
     1621 tactagatgg tcgagtgcgc taattttcat ttccagcttt ctttttcaga cggcagcagc
     1681 atactgttgc cgtctgaaaa tcattatgct tgttttgcag ccttcatatt gccaatgaat
     1741 ttgtcgaaca aatagccgac atcttgcgga cccgggctgg cttcggggtg tccttggaaa
     1801 cagaacacgg gtttgtcggt cagctcgatg ccttgcaagg tattgtcgaa caaggatttg
     1861 tgggtaatgc gtgcgttggc gggcagggtg tcggcatcga cggcgaaacc gtggttttgg
     1921 ctggtaatga cgactttgcc gctgtccaaa tcttgcacag gatggttcgc accgtggtgg
     1981 ctgaagcgca ttttcagggt tttcgcgccg atggcgaggc tgatgagctg gtgtcccaag
     2041 cagatgccga aaatcggttt gccgctttcc atcagttttt gcacggcttc gatggcgtag
     2101 gtgcaaggct cggggtcgcc ggggccgttg gacaggaaca cgccgtcggg attgagtgcc
     2161 aacacgtctt ccgcgctcgt ttgtgcgggg acgacggtca ggcggcagcc gcgcgaggcg
     2221 agcatacgca ggatgttggt tttcacgccg aaatcgtagg cgacgacgtg gtaaggctgt
     2281 ttgtcagggg taacgaaacc tttgcccaat tcccattcgc cttccgtcca ttcgtaagtt
     2341 tccgtgcagg aaacttcttt tgccaaatct ttgccgacca tgctgccgaa tgcggcgatg
     2401 agttcttgcg ctttttcaac ggtggcatcc gcacctgtca gaatcgcgcc gccttgcgcg
     2461 cctttttcgc gcaacagcat ggtcaggcgg cgggtgtcga tgtcggcgat ggcgacggtt
     2521 tcgttgcgta ccaaatagtc gtgcaggctt tcggaggcgc ggaagctgct gtgcaagagc
     2581 ggcaggtcgc ggataatcag gcctgcggcg taaacgctgc ggctttcttc atcttcggcg
     2641 ttggtgccgg cattgccgat gtgggggtag gtgagggtaa cgatttgttt gcagtaggac
     2701 gggtcggtca ggatttcctg atagccggtc atcgaagtat tgaacacgac ttcgccggaa
     2761 gccgaacctt cgtaaccgat tgatgtgccg tggaatacgc tgccgtcagc gaggacgagg
     2821 agggcggggg tgttcatgat gggaatcctg tttttaataa aattcttgac aatgccgtct
     2881 gaagggactt cggcaggggg catccggtcg gaaaaatccg gtcaaaaaaa aacacgccgc
     2941 gcaagataga cgcgtaacgt gcttttcggg caagtgccta taccctgaaa gcagcatatt
     3001 ttaagacgaa acatacccga tttcaagcgc aaacgcggca ggcgggctga tatgttcgcg
     3061 cgaaaacgga aatccggggc ataaaaccgc ccgctccgcg ccccctatgc ccgttacgca
     3121 tttccccacg tccgcccggc gaaactatgg gaatacccga accgtcattc ccgcgcaggc
     3181 gggaatccgg acctgtcggc acggaaactt atcgggtaca acggtttctt gagattttac
     3241 gtcctagatt cccgcctgcg cgggaatgac ggcatcggtt tgacggtatt taattgaatt
     3301 gtggaaattg acggattcag tgagattggc gggatgaagc ctaccctgta gcccgccttt
     3361 tatagcggat taacaaaaac cggtacgggt tgccccgccc cggctcaaag ggaacggttc
     3421 cctaaggcgc ccaagcaccg ggcgaaccgg ttccgtacca ttcgtactgc ctgcggcccg
     3481 ccgccttgtc ctgatttttg ttaatccgct atacggaccc gccccctccc gaaaaacgca
     3541 aaaaatgccg tccgaaaacc tttcggacgg cattttcgcg tga
//
LOCUS       DAWXHA010000138         3567 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.138, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000138 DAWXHA010000000
VERSION     DAWXHA010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3567
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.138"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            295..993
                     /locus_tag="AABD07_001921"
     CDS             295..993
                     /locus_tag="AABD07_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356387.1"
                     /translation="MDRAEQGVTSPFICMAENGLEYFVKGLHATRASQINEWIGGNMA
                     QALGLPVAPFELLEVGEELYEELPAKMKEIGKGICFGSLAQKGCALLEPADIPRIDTV
                     MQRQIAAFDWFVRNEDRTIGNPNLLYRNCNNSLIVIDHNCAFDTGFNPNNFLQNHIFS
                     SAFRQILEDWVLREEMELWLKSALPAYRKACDNLPPEWAWANEERDLPAAYNRSRTDE
                     TVRRIDNGTLWSIS"
     gene            990..1808
                     /locus_tag="AABD07_001922"
     CDS             990..1808
                     /locus_tag="AABD07_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3037 domain-containing protein"
                     /protein_id="HFB2356388.1"
                     /translation="MNQYAMRFAVIRFMPYVQTREFANIGIIITHPKSGYFDFKIEQR
                     YSRLSRFFRRFDSSVYKAATRAFAEELQRIGKLAAYSAPDQIRAMLDHLTRPREALIM
                     AAQPGVTLAPDRGQELNRLFDYFVAHSFAKSQPEAELTRQIQAMLKPLQTAYPFKEST
                     IGDPSGFHASIPLVQKAENGEIRKIIKPIYFGQKDPADIYYKSDKWIAGIKRLRRGGY
                     IDRSEILFAYEPPERPDKAQEKALLDVLGDLEEQGIRLADNRSEGKIIRNFACG"
     gene            1978..2160
                     /locus_tag="AABD07_001923"
     CDS             1978..2160
                     /locus_tag="AABD07_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HFB2356389.1"
                     /translation="MNSLDVIALLKQDGWYKVAQSGSHSQYKHPTKKGRVTVPHPKKD
                     LPTGTVKNIYKQAGLK"
     gene            2262..2663
                     /locus_tag="AABD07_001924"
     CDS             2262..2663
                     /locus_tag="AABD07_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HFB2356390.1"
                     /translation="MFIPAALHKDEHSAYGVTIPDLPGCFSCGDTVEEAVANARSAAY
                     MHIDGMIEDGGFKNLAVSSIADLSQEPDYHGATWVMIEIDPAKISRQQIRFNVSWPQY
                     LLDRVDEYTSANHETRSGFLAKAALLTMNQA"
     gene            complement(2762..3544)
                     /locus_tag="AABD07_001925"
     CDS             complement(2762..3544)
                     /locus_tag="AABD07_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356391.1"
                     /translation="MKLRRLIMEMQLDKQTLTVVVRNSEPVELSVFAQSMMSLADDYE
                     SMCGSAGSHARLYIKEIRQGSIIAELAPLLPLAGTLFEGAGQILAYAKNFIEITDWLM
                     GKGKEPAGVTDSQIRNIANIMQPAASDKNGSIEINVNDNNGSVVNNITYNYFAANTVQ
                     NQARRILGERAEASESGDYGQMVMYFVQAAPTKETNQAVIEGIYSRPVKILIPEHIKR
                     EMFAEPYPFEKYYIVDVSVQTARGKPRLYKVTGYHGVVDGDD"
BASE COUNT          947 a          946 c          832 g          842 t
ORIGIN      
        1 ctttagacag cctgaccgtt attggtaggg tattttggtg gagcgtgctg gattgacaaa
       61 ttcctctagg gggaaatctc aaaaagtcgg atttacagat ttacacaaag tgtaaatttc
      121 atcgtatttc cttttcggtt gaaaccccgc cctttagggc ggcaggatca gactctgttt
      181 gggaggggcg taaccccttc cgaatcaggg caacacatag ggcggtgctt tatgtgtcgt
      241 cctgtgtgtt gaaacatagg ataaagaaaa gaaatgttgc agatacagac aataatggat
      301 cgtgcggagc aaggtgttac ctcgccgttc atctgtatgg cggagaatgg tctggaatat
      361 ttcgttaaag ggctgcacgc cacccgtgca agccaaataa acgaatggat aggcggaaac
      421 atggcgcagg ctttgggctt gcccgttgct ccgtttgagc tgttggaagt cggagaagag
      481 ctgtacgaag aattgcccgc aaagatgaaa gaaatcggca aaggcatctg tttcggctca
      541 ctggcgcaaa aaggctgtgc gttactggag cctgcggaca tcccgcgaat cgatacagtc
      601 atgcagcggc aaatcgccgc tttcgattgg tttgtccgta atgaagacag aacaatcggc
      661 aaccctaacc ttttgtatag aaattgcaac aattccttga ttgttattga tcataactgc
      721 gccttcgaca ccggcttcaa tccaaataac tttctgcaaa atcatatttt ctcatcggca
      781 tttagacaga ttttggaaga ttgggtgctt cgggaagaga tggaattatg gctgaaaagc
      841 gcattgccag cctacagaaa agcgtgtgat aatctgccgc cggagtgggc atgggcaaac
      901 gaagagcgcg acctgcccgc cgcctataac cgcagccgca ccgacgaaac cgtccgccgc
      961 attgataacg gaacactttg gagcatctca tgaaccaata tgccatgcgt tttgccgtca
     1021 tacggtttat gccctatgtc caaacgcgcg aatttgccaa catcggcatc atcataaccc
     1081 atcccaaaag cggctacttc gactttaaaa tcgaacagcg ttacagcaga ttgagccgtt
     1141 ttttccgccg cttcgattcg tccgtctata aagcggcgac ccgtgccttt gcagaagaat
     1201 tacagcggat tgggaaattg gcggcatact ccgcgcccga tcagatacgc gccatgctcg
     1261 accatttgac ccgcccgcgc gaagccctga ttatggccgc ccaaccgggc gtaaccctcg
     1321 cccccgacag ggggcaggaa ctgaaccgcc tgtttgatta ttttgtcgcc cacagctttg
     1381 ctaaaagcca acccgaagca gaacttaccc gacaaataca ggcaatgtta aagccgcttc
     1441 agacggcata ccccttcaaa gaaagcacaa tcggcgaccc gtcaggcttt cacgcctcca
     1501 tccccttggt gcaaaaggcg gaaaacggcg aaatacggaa aatcatcaag cctatctatt
     1561 tcggacagaa agaccctgcc gacatctatt acaagtctga taagtggatt gccggcataa
     1621 aacggttgcg gcgcggcgga tacatcgacc gctctgaaat attgtttgcc tacgaaccgc
     1681 cggagcgtcc cgacaaggca caagaaaagg cattgcttga cgtattgggc gacctggagg
     1741 aacagggcat acggcttgcc gataaccgaa gcgaaggcaa aatcatcaga aactttgcct
     1801 gcggctgaca gccctcaaga ccgcccgcgt tatgcgggct ttttacaccc ttccctgcaa
     1861 ctactgccga aagatatttt tacacacaaa tacacataaa aattgacaaa ataaaaatta
     1921 gtgtgtatta ttacgcacat tggcaggcgt gccatgcatt aagattagga gtgataattg
     1981 aatagcctag acgttattgc cctactcaaa caagacggtt ggtataaagt tgcacaatcc
     2041 gggagccatt cgcaatataa gcacccaaca aaaaaaggcc gtgtaaccgt gccgcacccg
     2101 aaaaaagact tgccgacagg tactgtaaaa aatatctata agcaagccgg tttgaagtaa
     2161 cggcaggcag cggggtttcc cgccgccccc cttctaatca aacaatcgac gggttatctc
     2221 acgcgcccat aaacctgaac aacataatta aaggaaatca aatgtttatc cctgccgccc
     2281 tgcacaaaga cgaacattcg gcatatggcg taaccatccc cgaccttccc ggctgtttct
     2341 cttgcggcga caccgttgaa gaagccgtcg ccaacgcccg ttctgccgcc tatatgcata
     2401 ttgacggtat gattgaggac ggagggttca aaaaccttgc cgtaagcagc attgccgatt
     2461 tgagccaaga acctgattat catggggcaa catgggtaat gattgaaatc gaccctgcaa
     2521 aaatcagtcg gcagcaaatc cgattcaacg tcagctggcc gcaatacctt cttgatagag
     2581 tggatgaata tacatccgca aatcatgaaa cccgtagcgg ttttttagcc aaagccgccc
     2641 tgcttaccat gaatcaggca tagccagccc gttcaacccg cccgcacacg cgggcttttt
     2701 tcacgccccg ccgaacctga aaacaacaca aaaccgacaa agccgcccga aaaggcggtt
     2761 ttcaatcgtc cccatcgact accccgtgat acccggtaac tttgtagagc ctgggcttgc
     2821 cgcgcgccgt ctgtacgctt acgtcaacaa tataatattt ttcaaatgga taaggctctg
     2881 caaacatttc gcgcttgatg tgttcgggaa tcaggatttt gaccggacgg ctgtatatcc
     2941 cttcaataac cgcctgattg gtttcctttg tcggcgcggc ttgtacgaaa tacatcacca
     3001 tctgcccgta atcccctgat tcggacgctt ccgcccgttc gcccagtatc cgccttgcct
     3061 gattttgtac cgtgtttgcc gcgaaatagt tgtaggtaat attattgacg acggagccgt
     3121 tgttgtcgtt cacgttgatt tcaatcgacc cgtttttatc cgatgcggca ggctgcatga
     3181 tatttgcaat attgcggatt tggctgtccg ttacccctgc gggttctttg cctttaccca
     3241 tcagccaatc ggtaatctca ataaaattct tggcgtacgc caatatctgc cccgcgcctt
     3301 caaaaagcgt acccgccaaa ggcaagaggg gtgcaagctc ggcaataatg ctgccctgcc
     3361 tgatttcctt aatatacagc cgcgcatgac tgcccgcgct gccgcacatg gattcgtaat
     3421 catcggcaag gctcatcata gactgcgcaa ataccgacaa ttccaccggc tcgctgtttc
     3481 tgacaaccac tgtcaatgtc tgtttgtcca attgcatttc cataataagc ctccttaatt
     3541 tcatctgatt ttaatacgcc gcccgaa
//
LOCUS       DAWXHA010000139         3511 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.139, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000139 DAWXHA010000000
VERSION     DAWXHA010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.139"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            113..988
                     /locus_tag="AABD07_001926"
     CDS             113..988
                     /locus_tag="AABD07_001926"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HFB2356392.1"
                     /translation="MLQGSLVALITPMNQDGSIHYDQLRQLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHLSVIEETVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMNNETILRLAEIPNIVGV
                     KEASGNVGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            1066..2193
                     /gene="bamC"
                     /locus_tag="AABD07_001927"
     CDS             1066..2193
                     /gene="bamC"
                     /locus_tag="AABD07_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HFB2356393.1"
                     /translation="MTHIKPVIAALALIGLAACSGSKTERPKLDYQSRSHRLIKLEVP
                     PDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQQPADAEVLKSVKGVRLERDGSQR
                     WLVVDGKSPAEIWPLLKAFWQENGFDIESEEPAIGQMETEWAENRAKIPQDSLRRLFD
                     TVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHKAMKEVYGDKNKDTTMWQPSASDP
                     NLEAAFLTRFMQYLGVDGRQAENALAKKPTLPAANEMARIEGKSLIVFGDYGRNWRRT
                     GLALDRIGLTVVGQNTERHAFLVQKAPNESNAVTEQKPGLFKRLLGKGKAEKPAEQPE
                     LIVYAEPVADGSRIVLLNKDGSAYAGKDASALLGKLHSELR"
     gene            complement(2250..3182)
                     /gene="pip"
                     /locus_tag="AABD07_001928"
     CDS             complement(2250..3182)
                     /gene="pip"
                     /locus_tag="AABD07_001928"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HFB2356394.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSHPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEGVDEDAYASL
                     AIARLENHYFVNGGWLQGDKAILNNIGKIRHIPTVIVQGRYDLCTPMQSAWELSKAFP
                     EAELRVVQAGHCAFDPPLADALVQAVEDILPRLL"
BASE COUNT          939 a         1139 c          789 g          644 t
ORIGIN      
        1 tgggacttaa gccttggaac caaccgtgcg gccgatatgt ttcacacaaa caacaaagta
       61 agctacaatc cgaagcataa tcgacctcac tcaatgaata aaaggtttcc gtatgttaca
      121 aggtagcttg gttgccctga ttaccccgat gaatcaagac ggcagcatcc attacgacca
      181 actccgccaa ttaatcgact ggcacatcga aaacggcacg gacggcatcg tcgctgtcgg
      241 cacgacaggc gaatccgcca ccctctccgt cgaagaacat ttaagcgtaa tcgaagaaac
      301 ggtcaaacac gttgccaaac gcgtccccgt catcgccggc acaggggcga acaacaccgt
      361 cgaagccatc gccctttccc aagccgccga aaaagccggc gcggactaca ccctctccgt
      421 cgtcccctat tacaacaaac cttcccaaga aggcatgtac cgccatttca aagccgttgc
      481 cgaagccgcc gcgattccga tgatactcta caacgtgccc ggcagaaccg tcgtcagcat
      541 gaacaacgaa accatcctgc gccttgccga aatccccaac atcgtcggcg ttaaagaagc
      601 aagcggcaac gtcggcagca acatcgaact catcaaccgc gcgcccgaag gcttcgtcgt
      661 cctttccggc gacgaccaca ccgccctgcc gttcatgctc tgcggcggac acggcgttat
      721 taccgtagcc gccaacgccg cgcccaagct ctttgccgat atgtgccgtg ccgcgctgca
      781 aggcgacatt gcccttgcac gcgaactcaa cgaccggctg attccgattt acgacaccat
      841 gttctgcgaa cccagtcccg ccgcaccgaa atgggcggta tccgccttgg gcagatgcga
      901 accgcacgtc cgcctgccgc tcgttccgct gacggaaggc ggacaggcaa aagtccgcgc
      961 cgccctgaaa gcctcaggac aactttaaat atagccatgc cgtccgaacc gttcggacgg
     1021 cataacatga caaacacttt aatatccatc acacaggatg acacgatgac ccatatcaaa
     1081 cccgtcattg ccgcgctcgc actcatcggg cttgccgcct gctccggcag caaaaccgaa
     1141 cggcccaagc tcgactacca aagccggtcg caccgcctga tcaaactcga agtcccgcct
     1201 gatttgaaca accccgacca aggcaacctc taccgcctgc ctgccggttc gggagccgtc
     1261 cgcgccagcg atttggaaaa acgccgcaca cccgccgtcc aacagccagc cgatgccgaa
     1321 gtattgaaaa gcgtcaaagg cgtccgcctc gagcgcgacg gcagccaacg ctggcttgtc
     1381 gttgacggca aatcccccgc cgaaatctgg ccgcttctga aagccttttg gcaggaaaac
     1441 ggcttcgaca tcgaatccga agaacccgcc atcggacaaa tggaaaccga gtgggcggaa
     1501 aaccgtgcca aaatccccca agacagcttg cgccgcctat tcgacacagt cggtttgggc
     1561 ggcatctact ccaccggcga gcgcgacaaa ttcatcgtcc gtatcgaaca gggcaaaaac
     1621 ggcgtttccg acatcttctt cgcccacaaa gcaatgaaag aagtgtatgg cgacaaaaac
     1681 aaagacacga ccatgtggca gccttccgct tccgacccca accttgaggc cgctttcctg
     1741 acgcgcttta tgcaatattt gggcgttgac ggacggcagg cggaaaacgc attggcaaaa
     1801 aaaccgaccc ttcccgccgc caacgaaatg gcgcgtatcg aaggcaaaag cctgattgtc
     1861 tttggcgact acggcagaaa ctggcggcgc accggccttg ccctcgaccg catcggactg
     1921 accgtcgtcg gtcaaaacac cgaacgccac gccttcctgg ttcaaaaagc cccgaacgaa
     1981 agcaatgcag ttaccgaaca aaaaccgggg ctgttcaaac gcctactggg caaaggcaaa
     2041 gcggagaaac ctgccgaaca gccggaactg attgtctatg ccgagcctgt cgccgacggt
     2101 tcgcgcatcg tcctgctcaa caaagacggc agcgcatatg ccggcaaaga cgcatccgca
     2161 ctgttaggca aactccattc cgaactgcgt taaaccgttc aaaacaaaag cagcttccaa
     2221 acagaagctg cttttttgtg cggaactttt tacaacaaac ggggcaaaat atcctcaacc
     2281 gcctgaacca acgcatccgc caaaggcgga tcgaacgcac aatgccccgc ctggaccacc
     2341 ctcaattccg cttcgggaaa ggctttcgac agctcccacg cactctgcat aggcgtacac
     2401 aaatcatacc gcccctgcac gataacggtc gggatatgcc gtattttgcc gatattgttc
     2461 aaaatcgcct tatcaccctg caaccaaccg ccgttgacaa aataatggtt ttccaaacgc
     2521 gcgattgcca gtgaggcata agcatcttca tccactccct ccggctcgaa acgaatcaga
     2581 tagctttccc aatccgccca agccttcgcg gcagacaggc acacttcttc atcttgatga
     2641 aacagcaacc cgtgatacgc ctcaatcagc cggttccgcc gattttcagc aatcggcgcg
     2701 acaaattttt gccattgttc cggataaatc cggctcacgc cgcccgcctc gttcagccac
     2761 gccgtttcag acggcctgca caaaaatatc ccgcgcaaca ccaatccctt tacccgttcg
     2821 ggatgggttt gggcataagc cagcgacaaa gtgctgcccc acgaaccgcc gaacaccagc
     2881 catttcccga tacccagcat ttcacggact ttttcaatat ccgccaccaa atcccaagtc
     2941 gtattgtctt ccgcacaagc atacgggtgc gaacgtccgc aaccgcgctg gtcgatgatg
     3001 acgatgcgga acacatcagg attgaaaaaa ccccgacatt caggcgaagc ccccgcgccc
     3061 ggcccgccgt gtaaaaaaat gaccggcaca ccgtcgggat tgcccgactc ttcccaataa
     3121 atttgatgaa tttcagacac ctgcaagtat ccgctatgaa aaggctgttt tatttcatac
     3181 atcatcttct cccatattgc ttctgacaat ccgaacatcc cgacacgcga catcccgcac
     3241 gaaacacaag ccgccccgaa aggcaaatgc cgaaaaatcg cgataaaaac catcaatcgg
     3301 aaaatattgc ataaacaggc gaaaatatat cattgaaaag aaaacccata caatgtctga
     3361 cagaaacaag ccgctttgcc attgtttcct aacagttaaa ccccgccctt caaggcggcg
     3421 gggcagggct tgattcaaaa tggcgcaagc ccctgccctc aaatccaaca cgcaggatta
     3481 aaccataata gcggctttct tattatttct t
//
LOCUS       DAWXHA010000140         3445 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.140, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000140 DAWXHA010000000
VERSION     DAWXHA010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.140"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..2112
                     /locus_tag="AABD07_001929"
     CDS             <1..2112
                     /locus_tag="AABD07_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFB2356395.1"
                     /translation="EARTLLFHTASYLKPEQQAELEKAVAYAFRAHDGQTRKSGDPYI
                     THPIAVATQLALWHMDTQGLCAGVMHDVLEDTGVTKGEMAAVFGNTVAEMVDGLSKLE
                     KLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTLGSMRPDKRRRIARET
                     LEIYAQIANRIGLNNAYRELQDLSFQNLHPNRYETLKKAMDKSRKNRQDVVGKVLRAF
                     GQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGFRVIVNSIPACYAALG
                     TLHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQIRTREMDAVAEGGIV
                     GHWSYKSDSKTVDQAVLHTNQWLKNILDLQASSANAIEFLEHVKVDLFPNEIYILTPK
                     GKILTLPKGATPVDFAYAVHTDIGHKTVAARVNNVMMPLRTKLKTGDSVEIITSEHAK
                     PNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALSSLLPKDVLLSDGIKE
                     KYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFGSEVRLSSIKVDGQES
                     GHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPEQQLDADWENMNGQNY
                     RVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTEGFVEFKFLLKVKNLD
                     QLNQIIQNLHSIPYIRKVIRS"
     gene            complement(2179..3363)
                     /gene="coaBC"
                     /locus_tag="AABD07_001930"
     CDS             complement(2179..3363)
                     /gene="coaBC"
                     /locus_tag="AABD07_001930"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HFB2356396.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTNLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACRENGM
                     GRMPEPAELLDLLPDLWTPKILRDKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEISLIHGQLQTTLPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDTLASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKTTNQIVIIDDDAELSFPETSKDEAAMRIVERLAVYL
                     NK"
BASE COUNT          900 a          863 c          841 g          841 t
ORIGIN      
        1 gaagcgcgta ccctgctttt ccataccgcc tcctacctca agcccgagca acaggcggag
       61 cttgaaaaag ctgtcgccta tgcgtttcgc gcccacgacg ggcaaacccg caaaagcggg
      121 gatccctaca tcacgcatcc gattgccgtt gcgacgcagc tcgccctttg gcatatggac
      181 acacagggtc tttgtgcagg cgtgatgcac gacgtattgg aagatacggg cgtgacaaaa
      241 ggggaaatgg cggcggtgtt cggcaatact gttgccgaga tggtggacgg gctgtccaaa
      301 ctcgaaaaac tcaaatttga agatcatgcg gaacatcagg cggagagttt ccgcaaactg
      361 attttggcga tgaccaaaga tgtgcgcgtc atcgttgtca aacttgccga ccgcctgcac
      421 aatatgcgga cgctcggttc gatgcgcccg gacaaacgcc gccggattgc aagggaaacc
      481 cttgaaatct acgcacagat tgccaaccgc ataggtctga ataatgcgta tcgggagctt
      541 caggatttat cgttccaaaa cctgcatccc aaccgctacg agactttaaa aaaagcgatg
      601 gacaagagcc ggaagaacag gcaggacgtt gtcggcaaag ttttgcgcgc gttcggccag
      661 cggctggtag gcgcgaatat agaggccaaa atcaaaggca gggaaaaaaa cctgtacggc
      721 atccatcaga aaatgatggc gaaaaagctg cgctttgccg aggttatgga tatttacggt
      781 ttccgcgtca ttgtcaacag cattcccgcc tgttatgccg cactcggcac attgcacacc
      841 ctctatcagc ccaagcccgg acggttcaaa gactatatcg ccattccgaa aagcaacggt
      901 tatcaaagtc tgcatacgac tttggtcggc ccctacggct tgccgattga agttcagata
      961 cgcacgcggg aaatggatgc cgtggcggaa ggcggtattg tcggccattg gagctataaa
     1021 tcagattcca aaacggtcga tcaggcagtg ctgcacacca atcaatggtt gaaaaacatt
     1081 ttagacttgc aggcaagcag cgccaatgcc attgagtttc tcgaacacgt caaagtcgat
     1141 ttgtttccga acgaaatcta catccttact ccgaaaggaa aaatcctaac tttgcccaaa
     1201 ggggcaacgc ctgtcgattt tgcttatgcg gtgcataccg acattgggca taaaacagtt
     1261 gccgcgcgtg tcaataatgt gatgatgccg ctgcgtacga agctcaaaac cggtgattct
     1321 gttgaaatta tcacatccga acacgccaaa cccaatcccg cgtggttgaa tttcgccgtg
     1381 tccggcaggg cgcgcagtgc catacgccaa tatattaaaa atcttaaccg gcacgatgcg
     1441 gtcgttttgg gagagagcct cttacaaaaa gccttgtcca gtttgctgcc caaagatgtc
     1501 ctgctttcag acggcatcaa agaaaaatac cttgccgatc tcaacgacaa acagacttca
     1561 tttgaggaag tgctgtacaa cgtcggtatg gggcataccc tgcctgttta tgtcgccatg
     1621 catatcgccg aattggcagg ggagcatttc ggcagcgagg tcaggctcag ttccattaaa
     1681 gttgatggtc aggaaagcgg gcatattcat tttgcagagt gctgccaccc tgttcccggc
     1741 gattccatcc gtttgctgtt ggttaaggga aaaggcatga ttatccatag ggatacctgc
     1801 ccgacgttgt tgaagtccga tcccgaacag cagctggatg cagactggga aaatatgaac
     1861 gggcagaact accgtgtcgg gcttcaagtc caatcggaag acagccacgg cctgttggca
     1921 ttaatggcgc aagcgatttc cgattccggt gcggacatcg agtcggtcga aacaccgtct
     1981 aaatcccagt cgggaacgga aggttttgtc gaattcaaat tcttattgaa agtcaagaat
     2041 ttggatcagt tgaatcagat tattcaaaat ctgcacagca tcccatatat ccgcaaagtc
     2101 atcagaagtt gaagcaggta aaacgggttg cctgttaatc aaaaggcaac ccgttttatg
     2161 gtttatccgt tcaattgctt atttgttcaa atatacggca agcctttcaa caatccgcat
     2221 tgccgcttca tctttacttg tttcggggaa agacaactcc gcatcatcat ctatgataac
     2281 aatttggttg gttgtcttgc ccatcgcgat tgaaacatca ttggcaacta tcaccggtat
     2341 ttttttctta atacgttttt cccgcgcata tgccattaca ttctccgttt cagcggcaaa
     2401 accgatgcag aacggcgggt tcggcaatga ggcaatagaa gccaaagtat cggggttctc
     2461 atccaattcg atggataacg gtttggcatt tttatctttt ttgaattttt gcgtactcct
     2521 gtttttaacc ttatagtctg agacggcggc aacagaaata aaagcatctt gtttttcaat
     2581 caaacgatgt actgcgcgat gcatatcttc ggcactgacg gcttgaaccg tatcggatat
     2641 gccgaaaggc agcgtggttt gaagctgtcc gtgaatcagg ctgatttccg caccggcggc
     2701 acggcacgcc cgcgccaaag ctacgcccat ttttccgctg gaggtatttg tgatgcccct
     2761 gacagggtca atggcttcaa atgtcgcacc tgcggtaatc aagattttct tgtcccttaa
     2821 aattttcggt gtccacaagt ctggaagcaa atccagcaat tcggcaggtt ccggcatcct
     2881 tcccatacca ttttctctgc aagcctgttc gcccaagccc ggcatataga cagtaatgcc
     2941 gtctgaaacc agttgtgcga tattccgttg gttggcagga ttcagccaca tttccacatt
     3001 catcgcggga gcgatggcaa gagggcattt ccgtgcggct gccagattgg tcagtaggtt
     3061 atctgccacg ccgttacaga tttttgccac ggtattcata cttgccggcg caatcagaaa
     3121 aacatccgca ttccgggtca ggttgatatg ttccataccg tttgaaccgt tgccgccgtg
     3181 cgtgtcggtc agaacgggat tgccgctcaa agcctgaaaa gtcagcggag aaacaaattc
     3241 agttgccgag cggctcataa ccaccgtaac cgaatgcccc tgttttttca gcagtcgcac
     3301 caactcgcaa gacttatacg ccgcaatact gcccgttaca cctaaaagaa tatgtttgcc
     3361 cattttgaca atttctaatt acgaagaaaa aacagcagcc attctataac aaagtacgga
     3421 tacattagtt accgtttgga tacga
//
LOCUS       DAWXHA010000141         3445 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.141, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000141 DAWXHA010000000
VERSION     DAWXHA010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.141"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            309..740
                     /locus_tag="AABD07_001931"
     CDS             309..740
                     /locus_tag="AABD07_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFB2356397.1"
                     /translation="MSVQLFVRGNLGAEFNLRPVASPKNDEASIVLNFSVASPNFKRN
                     AEGKSEVVSTEWISCEYWNRDAAHLHKILQVGMPVFVTGEERYESYTNRDGIEVRVRK
                     LRVQDVFIVPTERVEAIKLRPKREQSQDNNHVEDADDDIPL"
     gene            932..2971
                     /gene="topB"
                     /locus_tag="AABD07_001932"
     CDS             932..2971
                     /gene="topB"
                     /locus_tag="AABD07_001932"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HFB2356398.1"
                     /translation="MRLFLCEKPSQAKDIGKVLGVLGGRHDGYFQNGDTIVTWAFGHI
                     LTQAAPDAYGEQYADFGNISALPILPEVWQMQVPPKVSKQFKVIKSLLAKADEVVIAT
                     DADREGEVIAREILDYCGYRKKISRFWTSGLDTQSVKKALSSIMPGKDKENLYQAGLA
                     RGRADWLVGMNLSRAYTAAYSAGYGREHILSIGRIQTPTLKLVVQRDKEIDTFVPYNY
                     YTLSVDFETADKSVFTTLWQVPENWRNTDGYCTNLEAVKALVKQLEKSTGKVITSNKE
                     RKSTPPPLPYSLSALQKEAGKKLGLSASKVLKIAQTLYEKYKITSYPRTPCRYLPKSQ
                     MSEVKDVFAAIQTIDKSMLSVIEKADPERQSRVWNDNQVNKHSHHAIIPTKASNFDLS
                     VLDKNELTVYRMIRDRYIAQFYPDFEYDSTVVEVEACSHLFKASNQSPVISGWKVLLG
                     KDVFEGDQIDEGPALPHLKVNDEVDTLSFNPETKKTTPPPRFTEASLLDEMQTLKDFL
                     KNVEDEQIRKILKSTEGLGTEATRATIIDRLFEMGYMEKKRSKIYATEKGRNLIARIP
                     TMIADPITTAKWELALAGIEAGKLTLAEFMAYQQKVITELVGQAKKDAVGKARPPKQT
                     DSAGTKKQAVARNEDDVCPTCKEGRLRQRGFKENPDKRYWGCSRFPECKHFEWVK"
     gene            2959..>3445
                     /locus_tag="AABD07_001933"
     CDS             2959..>3445
                     /locus_tag="AABD07_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356399.1"
                     /translation="MGQIKKDFEMKKLVKKLSDSIFGNTCIEYVLDENHNYKEQYNAN
                     KDLFIYINGIQVGSISPGELQELQYRVFYSSSLWWSIFKSILGFLLKPAIIALTALPL
                     GVLLLLWLNTDNPEAFHRLFMMLQDPAHFAKAISGLFRLFYCISFFGTFVKLVFNQDS
                     IF"
BASE COUNT          984 a          689 c          789 g          983 t
ORIGIN      
        1 tacagtagtg gatgccgccg gcggattcat cggctttcgt caacttcggt tctgtgccga
       61 tgactgtaac gccccgttac agtagtggat gccgccggcg gattcatcgg ctttcgtcaa
      121 cttcggttct gtgccgatga ctgtccgtgg gcattttagc tagatatagc ataaggttta
      181 atttgtaata gttgctagtt gacaagagga atttatttag ttatgataat agaaccctta
      241 atctcatatt gggttatttt accctgtctt ttctgtcata tttttaaatc ctttttttgg
      301 agaaaaatat gtcagttcaa ctttttgttc gtggcaatct cggtgctgaa tttaatctgc
      361 gtcctgtagc aagccctaaa aacgatgaag cctcaatcgt actgaatttt tcagttgcct
      421 cacctaattt caaacgcaat gccgaaggta aatcagaagt ggtttcaacg gagtggattt
      481 cttgcgaata ctggaatcgt gatgctgccc atctccataa aatattacag gtcggtatgc
      541 cggttttcgt taccggtgaa gaacgttacg agtcttatac caatcgtgac ggtattgaag
      601 ttcgcgttcg taaattgcgt gttcaagatg tattcattgt tccaactgag cgtgtagaag
      661 ctatcaagtt gcgtcctaaa cgtgagcagt ctcaggacaa taatcacgtt gaagacgctg
      721 atgatgacat cccattgtaa atatatggcc acgaagaata cttccttttt tcgtgaaatg
      781 aactgttggc ttgctgcatt atgggctgac tttaaggata tgttcattgt tacccttatt
      841 tatggtggct taattgcttt ggcaatttgg gcttttttga ctatcgcatc ttggcttgtt
      901 ttgcagctga agcaaagctt gggattttaa aatgcgtttg tttttatgtg aaaaaccatc
      961 tcaagctaag gacatcggta aagtgcttgg tgttcttggc gggaggcatg atggttattt
     1021 tcagaatgga gacactattg ttacctgggc atttggtcat atcctgacac aggccgcgcc
     1081 agatgcttat ggcgaacaat atgctgactt tggaaatatc tccgcattgc ccattctccc
     1141 tgaagtttgg cagatgcagg taccgccgaa ggtatcgaag cagtttaaag tcattaaaag
     1201 cttgttggcc aaagcagatg aagtagtgat tgctactgat gcagaccgtg aaggggaagt
     1261 tattgcccgt gaaatattgg actactgtgg ctaccgtaaa aagatttccc gattttggac
     1321 gagtggccta gatacccaat cggtaaaaaa agccttatct tcaataatgc cgggtaagga
     1381 taaagaaaac ctatatcagg ccggtttggc gcgcggccgc gccgactggc tggtaggtat
     1441 gaacctgagt cgtgcctaca cagctgctta ttctgccgga tatggccgag aacatatttt
     1501 gtcgatcgga cggattcaaa caccgacttt aaagcttgta gtccaaaggg ataaagagat
     1561 cgatactttc gtgccttaca actactacac cctttcagta gattttgaga cagcagacaa
     1621 gtcagtgttt actacactgt ggcaggttcc tgaaaactgg cgtaatactg acggatactg
     1681 taccaacctt gaggctgtaa aggcacttgt caaacagctt gagaaatcta caggcaaggt
     1741 tattacctca aataaagagc gtaaaagcac cccgcccccg ttaccgtaca gcctttcggc
     1801 tttgcaaaaa gaagccggta aaaaacttgg cctatcggct tccaaagtgc tcaaaattgc
     1861 acaaaccctc tacgaaaaat acaagatcac gtcatatccc cgcacccctt gcagatactt
     1921 gccaaaatcg cagatgagtg aagtgaaaga tgtatttgcc gcgatacaga ctatcgataa
     1981 atccatgctt tcagtgattg aaaaagctga tcctgaacgt caatcaaggg tatggaacga
     2041 taaccaggta aacaaacatt cccatcatgc gattattccg accaaggcca gtaattttga
     2101 tttgtcagtc ctggataaga atgaattaac ggtgtaccga atgatacgag accgttatat
     2161 cgcacagttt tatccagatt ttgaatatga ctctactgta gttgaggttg aggcatgttc
     2221 acatttgttt aaagcctcca accaatcacc ggttatttcc ggttggaagg ttcttttggg
     2281 caaggacgtg tttgaaggcg atcaaatcga tgaaggtcct gctctaccac atctgaaagt
     2341 caacgatgag gtcgacacgc tttccttcaa tcccgaaact aaaaagacca cgccgccacc
     2401 gcgctttaca gaggcttctc tactcgatga gatgcagact ttgaaggact ttttgaagaa
     2461 tgtagaagac gaacagatca gaaaaattct caaaagtacg gaaggcttgg gaacggaagc
     2521 cactcgcgct accattatcg atcgtttgtt tgaaatgggt tatatggaaa agaaacggag
     2581 caaaatctat gcgacagaaa aaggccgtaa tctgattgcc cgtattccca ctatgattgc
     2641 cgatccgata acgacagcca aatgggagct ggctttggct gggatagaag ccggcaaatt
     2701 aactttagct gaatttatgg cttatcagca gaaagtgatc acagagctgg ttgggcaggc
     2761 gaaaaaggat gctgtaggaa aagctcgtcc gccaaaacag acggattcag ctggtacaaa
     2821 aaaacaggcg gtcgctcgaa atgaagacga tgtctgtccg acctgtaagg aaggccgtct
     2881 gagacagaga ggattcaagg aaaaccctga taagcggtat tgggggtgta gtaggtttcc
     2941 cgaatgtaaa cacttcgaat gggtcaaata aaaaaggact ttgaaatgaa gaagctggta
     3001 aaaaaattat ccgattcaat attcggaaat acttgtatag agtatgtgct agatgaaaac
     3061 cataattaca aggagcaata caacgctaat aaagatttat tcatttacat caatggcatt
     3121 caagtaggga gtatttcacc tggcgaattg caagaattgc aatatagagt gttttattct
     3181 agtagcctct ggtggagtat ctttaaatct atactaggat ttttattgaa acccgcaata
     3241 attgcgctta ctgccctgcc gctgggggtc ttgcttttac tgtggttgaa caccgacaat
     3301 cctgaagcgt ttcatcgatt attcatgatg ttacaggatc cggcacattt tgcaaaagca
     3361 atatccggac tttttcgtct gttttattgt atatcattct ttggcacttt tgttaaattg
     3421 gtttttaacc aagattcaat ttttt
//
LOCUS       DAWXHA010000142         3428 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.142, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000142 DAWXHA010000000
VERSION     DAWXHA010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.142"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..299
                     /locus_tag="AABD07_001934"
     CDS             <1..299
                     /locus_tag="AABD07_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HFB2356400.1"
                     /translation="FFPDILACDRLPEPNPAEDLNLPSETVNVEFQKSGIFQDSAQCP
                     APVTFTITVLDSSKQFAFSFENACTIAERLRYMLLALAWAVAAFFCIRTVSREI"
     gene            713..1033
                     /locus_tag="AABD07_001935"
     CDS             713..1033
                     /locus_tag="AABD07_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFB2356401.1"
                     /translation="MRQTCLLRKGEQMKLLAALIPLLMSVAGRILTALGLMAVTYAGV
                     DRLAAHFQQAITHSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSI
                     GKKK"
     gene            1034..2221
                     /locus_tag="AABD07_001936"
     CDS             1034..2221
                     /locus_tag="AABD07_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2075 domain-containing protein"
                     /protein_id="HFB2356402.1"
                     /translation="MAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGVRRKVFTNI
                     KGLKIPHTHIETDAKKLPKSTDEQLSAHDMYEWIKKPENVGAIVIVDEAQDVWPARSA
                     GSKIPENVQWLNTHRHQGIDIFVLTQGPKLLDQNLRTLVKRHYHIAANKMGLRTLLEW
                     KVCADDPVKMASSAFSSIYTLDKKVYDLYESAEIHTVNKVKRSKWFYALPVIILLIPL
                     FVGLSYKMLGSYGKKQEEPAAQESAATEQQAVLPDKTEGESVNNGNLTADMFVPTLPE
                     KPESKPIYNGVRQVRTFEYIAGCIEGGRTGCTCYSHQGTALKEVTELMCKDYVKNGLP
                     FNPYKEESQGQEVQQSAQQHSDRAQVATLGGKPQQNLMYDNWEERGKPFEGIGGGVVG
                     SAN"
     gene            2436..3380
                     /locus_tag="AABD07_001937"
     CDS             2436..3380
                     /locus_tag="AABD07_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISNgo3 family transposase"
                     /protein_id="HFB2356403.1"
                     /translation="MNIIGPDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKVYIGMEATGIYYEKAADMLSSYYTVYVINPLKINDYGKSRFNRTKTDKADSN
                     LIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQQQKQIKNRLHSTEEDFIRNIHQ
                     DLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIGKDTASVLYAQLTEKHFKT
                     ANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINN
                     LKKAGKPKMVIIVAIMRKLAKPAYYIVKTGQPYDAERH"
BASE COUNT         1119 a          766 c          793 g          750 t
ORIGIN      
        1 aattcttccc cgacattctc gcttgcgaca ggctgcccga gcccaatccg gcagaagatt
       61 taaatctgcc gtctgaaacc gtcaatgtag agtttcagaa atccggaatc tttcaagatt
      121 ccgcacagtg tcccgccccc gttacgttca ctataaccgt gcttgattca agcaagcagt
      181 tcgcgttcag ctttgagaac gcatgtacca tagccgaacg gctaaggtac atgcttctcg
      241 cccttgcttg ggcggttgcc gcctttttct gtatcaggac ggtatctaga gagatatagc
      301 ggtcaaaacc gttgggctac agtaacgttt attcaggcag gggggaggac gtccagaaag
      361 atttgtaaag acggcttcat cgtctttata aatctttttg gatacccctt gccgccctgc
      421 cgaagaatac actctgcccg cgggcagggt gataggcgcg cgccttttgc gccgttcccc
      481 ctgcccgcgc ggcgtcgcaa gtgagactgg gggtgtgggg gctagccccc gcaagacctt
      541 tccgattaag caactttagc caaaggcagg cgaagtaccg cactttgcgg gcgaagccgc
      601 aaacagccga gaagcgcggg gggggattgg cgataagcgc gagggggtgt ccccacagcg
      661 ctgccgcgcc gcgaatgcgg agcaatcttt cagattaaga aacatttgtt taatgaggca
      721 aacgtgcctt ttaagaaagg gagagcaaat gaaattgttg gccgcattga ttccgctctt
      781 gatgagcgtc gcaggccgta tattgactgc attaggcttg atggctgtta cctatgcggg
      841 tgtagataga ttggcagccc attttcaaca ggcgataacc catagcataa cgggcgcgcc
      901 tcaagcaatg ttacagcttt tctatataag cggcggtggt actgttctaa acattctttt
      961 cggcgcaatc gcctttattc tgtcctttaa acaaatgaca aaactcgcaa cctcaatcgg
     1021 gaagaaaaaa taaatggcag aaatctgttt gataaccggc acgcccggtt cagggaaaac
     1081 attaaaaatg gtttccatga tggcaaacga tgaaatgttt aagccagatg aaaacggcgt
     1141 acgccgtaaa gtatttacga acatcaaagg tttgaagata ccgcacaccc acatagaaac
     1201 agacgcaaag aagctgccga aatcaaccga tgaacagctt tcggcgcatg atatgtatga
     1261 atggatcaag aagcctgaaa acgtcggcgc aatcgttatt gtcgatgagg cgcaagacgt
     1321 atggcccgca cgctccgcag gttcgaaaat ccccgaaaac gtccaatggc tgaacacaca
     1381 caggcatcag ggcatagata tatttgtatt gacacaaggt cctaaactct tagatcagaa
     1441 cttgcgaaca ttggttaaaa gacattacca cattgcggcc aacaaaatgg gtttgcgtac
     1501 cctgcttgaa tggaaagtat gcgcggatga cccggtaaaa atggcatcaa gtgcattttc
     1561 cagtatctac acactggata aaaaagttta tgacttgtac gaatccgcag aaattcacac
     1621 ggtaaacaaa gtcaagcgtt caaaatggtt ttatgcattg cccgtcatca tattattgat
     1681 tccgctattt gtcggtttgt cttacaaaat gttgggcagt tacggaaaaa aacaggaaga
     1741 acccgcagca caagaatcgg cggcaacaga acagcaggca gtacttccgg ataaaacaga
     1801 aggagaatcg gtgaataacg gaaaccttac ggcagatatg tttgttccga cattgcccga
     1861 aaaacccgaa agcaagccga tttataacgg tgtaaggcag gtaaggacct ttgaatatat
     1921 agcaggctgt atagaaggcg gaagaaccgg atgcacctgc tattcgcatc aagggacggc
     1981 attgaaagaa gtgacggagt tgatgtgcaa ggactatgta aaaaacggct tgccgtttaa
     2041 cccatacaaa gaagaaagcc aagggcagga agttcagcaa agcgcgcagc aacattcgga
     2101 cagggcgcaa gttgccacct tgggcggaaa accgcagcag aacctaatgt acgacaattg
     2161 ggaagaacgc gggaaaccgt ttgaaggaat cggcgggggc gtggtcggat cggcaaactg
     2221 aagaaaacgg caacagagaa aaaagacccg taaaccgttt gaatatagac ggcttacggg
     2281 tctttgtttc gcgcaaagca agggctaagg cagtcaggca gcaaatcccg caatgtatta
     2341 aaacagacgc gtagaaatgc cggctgcctt tatccatcct caaaattgaa tatcatccta
     2401 gccgtatcaa ggctgtataa ataaggaaaa taccaatgaa tataatcggg ccggacatct
     2461 caaaggacac catagacgca acattgcata aaacaaacgg aagtatccat tacattaaat
     2521 ttaagaataa tgatgatgga ttaaaacagt ttagattgtg gataaaggga aacagaatca
     2581 gaaaagtcta tatcggcatg gaggcaacag gcatctatta cgaaaaggca gcagatatgc
     2641 tttcttccta ctataccgtt tacgttatca atcccttaaa aatcaatgac tacggaaaaa
     2701 gcaggtttaa ccgtaccaaa accgacaaag cagattcaaa cctgatagca gattacataa
     2761 aaaggcatca agatacattg ataccgtatc agatacccaa aaacaaagca ctgcaaaaac
     2821 tgattaatct taaaaaccaa ttacagcaac agcagaagca aattaaaaac cgtcttcata
     2881 gcactgaaga agacttcata aggaacatac atcaagactt gatagatacc atacaggaca
     2941 agatggaaca ggtaaaaata gccatatccg aacaaatcaa aaaacaaacg gacaataacc
     3001 attaccgcaa tcttcaaacc atcccgagca taggcaaaga caccgcatca gttctttatg
     3061 cgcaactgac agaaaaacat tttaaaaccg caaaccaatt tgtatcctat gccggattaa
     3121 gtcccgccat catacaatca gggacaagcg taagaggtcg gggcagattg agccgatacg
     3181 gaaacagacg attaaaaagt acgctgtata tgcccgccct ttgtgcttac cgttttaacg
     3241 catttccgaa attaataaat aatctgaaaa aagcgggtaa gccaaagatg gtaattatcg
     3301 ttgccatcat gcgcaaactg gcgaagcccg cctattacat tgttaaaacc gggcagcctt
     3361 acgatgcgga aagacactga ttgaatcaat aaaattcaat aaaattaaac agttatgcaa
     3421 atatatct
//
LOCUS       DAWXHA010000143         3425 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.143, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000143 DAWXHA010000000
VERSION     DAWXHA010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.143"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            421..633
                     /locus_tag="AABD07_001938"
     CDS             421..633
                     /locus_tag="AABD07_001938"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
                     /protein_id="HFB2356404.1"
                     /translation="MTNIKNMINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYG
                     RKEHGYNENYKNKLQKLYGVYAEGSA"
     gene            614..3297
                     /locus_tag="AABD07_001939"
                     /pseudo
     CDS             614..3297
                     /locus_tag="AABD07_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261022.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
BASE COUNT          920 a          937 c          927 g          641 t
ORIGIN      
        1 gatataattc aaaatataaa aatgggttac atctggacat tacgaaattt ttattccttc
       61 gcctgaattc tattgtcaga ttcaaagaga cctcatcatg cgaaccacct caaccttccc
      121 tacaaaaact ttcaaaccgg ctgccatggc gttagctgtt gcaacaacac tttctgcctg
      181 cttaggcggc ggcggaggcg gcacttctgc tcccgacttt aatgcaggcg gcaccggtat
      241 cggcagcaac agcagggcaa cgatagcgga atcagcagca gtatcttacg ccggtataaa
      301 aaacgaaatg tgcaaagaca gaagcatgct ctgtgccggt cgggatgacg ttgcggttac
      361 agacagggat gccaaaatca aagcccccga atctgcatac cggagacttt tcaaacccaa
      421 atgaccaata ttaagaatat gatcaacctc aaacctgcaa ttgaagcagg ctatacagga
      481 cgcggggtag aggtaggtat cgtcgataca ggcgaatccg tcggcagcat atcctttccc
      541 gaactgtatg gcagaaaaga acacggctat aacgaaaatt acaaaaacaa attacaaaaa
      601 ctatacggcg tatatgcgga aggaagcgcc tgaagacaga ggcggtaaag acattgaagc
      661 ttctttggac aatgaggccg ttatagagac tgaagcaaag ccgacggata tccgccatgt
      721 aaaagaaatc ggacacatcg atgtggtctc ccatattatt ggcgggcgtt ccgtggacgg
      781 cagacctgca ggcggtattg cgcccgatgc gacgctacac ataatgaata cgcatgatgg
      841 aaccaagaac gagaaataat gtctgcagcc atccgcaatg catgggtcaa gctgggcgaa
      901 cgtggcgtgc gcatcgtcaa taacagtttt ggaacaacat cgagggcagg cactgccgac
      961 catttccaaa tagccaattc ggaggagcag taccgccaaa cgttgctcga ctattccggc
     1021 ggtgataaaa cagatgaggg tatccgcctg atgcaacaga gcgattaggg caacctgtcc
     1081 taccacatcc gtaataaaaa catccttttc atcttttcga caggcaatga cacacaagct
     1141 cagcccaaca cactgaccct attgccattt tatgaaaaga cgctcaaaaa ggcattatca
     1201 cagtcgcagg cgtagaccgc agtggagaaa agttcaatgg ctccaaccat tgcggaatta
     1261 ctgccatgtg gtgcctgtcg gcatcctatg aagcaaccgt ccatttcacc cgtacaagac
     1321 cgattcaagt tgccggaaca tccttttccg cacccatcgt aaccggcacg gcggctctgc
     1381 tgcagagata cccgtggatg agcaacgaca acctgcgtac cacgctgctg acgacggctc
     1441 aggacatcgg tgcagtcgga gtggacagca agttcggctg ggggctgctg gatgcgggta
     1501 aggccatgaa cggacccgcg tcctttccgt tcggcgactt taccgccgat acgaaaggta
     1561 catccgatat tgcctactcc ttccgtaacg acatttcagg cacgggcggt ctgatcaaaa
     1621 aaggcggcag ccaactgcaa ctgcacggca acaacaccta tacgggcaaa accgttatcg
     1681 aaggcggttc gctggtgtta tcggatatgc acgtcaaaac caaaggtgca ctgatttata
     1741 acggggcggc atccggcggc agcctgaaca gccacggcat tgtctatctg gcagataccg
     1801 accaatccgg cgcaaacgaa accgtacaca tcaaaaggcg gtctgcagct gggcgacaaa
     1861 ggtacgctgt acacacgttt gggcaaactg ctgaaagtgg acggtacggc gattaccgac
     1921 ggcaagctgt acatgtcggc acgcggcaag ggggcaggct atctcaacag taccggacga
     1981 catgttccct tcctgagtgc cgccaaaatc gggcaggatt attctttctt caaaaatatc
     2041 gaaaccgacg gcggtctgct ggcttccctc gacagcgtcg aaaaaacagc gggcagtgaa
     2101 ggcgacacgc cgtcctatta tgtccgtcgc ggcaatgcgg cacggactgc ttcggcagcg
     2161 gcacattccg cgcccgccgg tctgaaacac gccgtagaac agggcggcag caatctggaa
     2221 aacctgatgg tcgagctgga tgcctccgaa tcatccgcaa cacccgagac ggttgaaact
     2281 gcggtcgccg accgcacaga tatgccgggc atccgcctac ggcgcacaac tttccgcgca
     2341 gcggcagccg tacagcatgc gaataccgcc gacggcgtac gcatcttcaa cagtctcgcc
     2401 gctaccgtct atgccgacag tgccgccgcc catgccgata tgcagggacg ccgcctgaaa
     2461 gccgtatcgg acgggttgga ccacaacggt acgggtctgc gcgtcatcgc gcaaacccaa
     2521 caggacggtg gaacgtggga acagggcggt gtcgaaggca aaatgcgcgg cagtacccaa
     2581 actatcggca ttgccgcgaa aaccggcgaa aatacgacag cagccgccac actgggcata
     2641 ggacgcagca catggagcga aaacagtgca aatgcaaaaa ccgacagcat tagtctgttt
     2701 gcaggcatac ggcacgatgt aggcgatatc ggctatctca aaggcctgtt ctcctacgga
     2761 cgctacaaaa acagcatcag ccgcagcacc ggtgcggatg aatatgcgga aggcagcgtc
     2821 aacggcacgc tgatgcagct gggcgcactg ggtggtgtca acgttccgtt tgccgcaacg
     2881 ggagatttga cggttgaagg cggtctgcgc cacgacctgc tcaaacagga tgcattcgcc
     2941 gaaaaaggca gtgctttggg ctggagcggc aacagcctca ctgaaggcac actggtcgga
     3001 ctcgcgggtc tgaagctgtc gcaacccttg agcgataaag ccgtcctgtc tgcgacggcg
     3061 ggcgtggaac gcgacctgaa cggacgcgac tacgcggtaa cgggcggctt taccggcgcg
     3121 gctgcagcaa ccggcaagac gggtgcacgc aatatgccgc acacccgccg ggttgccggt
     3181 ctgggggtgg atgtcgaatt cggcaacggc tggaacggct tggcacgtta cagctacacc
     3241 ggttccaaac agtacggcaa ccacagcgga caaatcggcg taggctaccg gttctgacgg
     3301 acagaaaaca gacagccgca aagatcacgg tctttgcggc tgtttcttat gaaaagaaaa
     3361 ccctattcca attgcctgct tctattgttt caagacttct tccaaagatt cggcatcaat
     3421 cagac
//
LOCUS       DAWXHA010000144         3377 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.144, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000144 DAWXHA010000000
VERSION     DAWXHA010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.144"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(230..652)
                     /locus_tag="AABD07_001940"
     CDS             complement(230..652)
                     /locus_tag="AABD07_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFB2356405.1"
                     /translation="MTDIFTPSKRSFVMSKIHSKETKPEVLVRKFLFSQGFRYRKNDK
                     RYAGKPDIVLPKYKTVVFIHGCFWHGHSCNKGHIPKSNMDFWLEKITKNRERDIKNET
                     ELEKIGFKVIVVWECELKNKAICRERLNRLVEEIKDAV"
     gene            complement(658..2301)
                     /locus_tag="AABD07_001941"
                     /pseudo
     CDS             complement(658..2301)
                     /locus_tag="AABD07_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237377.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02391 family protein"
     gene            complement(2315..2644)
                     /locus_tag="AABD07_001942"
     CDS             complement(2315..2644)
                     /locus_tag="AABD07_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2356406.1"
                     /translation="MAFAHIPELQLECFIGKDNSFKDTFGRLWWDKPAPTITTKFFSI
                     SNGRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARLIGNAVPPMYAEKIGRA
                     IVDNIEC"
     gene            complement(2683..3273)
                     /locus_tag="AABD07_001943"
     CDS             complement(2683..3273)
                     /locus_tag="AABD07_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2356407.1"
                     /translation="MDYELSCKETYEANINAKFIQADIFELQPETLEKELGLKKNDDD
                     LILIGCSPCQYWSVIQTDKRKSEKSKSLLLEFQRFVEYFNPGYVVVENVPGILSRMKE
                     SGLDNFIKLLEEKGFTVHFGIHNTADYGIPQSRKRFTLIANRITKKSWNQSSIRANGL
                     RYAMFWEWKTAFPKLWQDIKTRRILCIVVRDYPISI"
BASE COUNT          905 a          757 c          559 g         1156 t
ORIGIN      
        1 agattcgaag cggttgccgg cttcctgccg tccgccggcg cctccgtcat cacgccggca
       61 accgcctttg tcatcccttg cttatctccc atttgcgaat cctcaaaaac gggcaaaaaa
      121 aagccctgtt acttgtagaa agtaaagggc gttaattttt gttaatcacc ccttcttagg
      181 gacgcaatat ataagggtct taattaaagg aagatgccgt ctgatttttt cagacggcat
      241 cttttatttc ctcgaccaac cgatttaatc gctccctaca aatagcttta ttttttaatt
      301 cgcactccca aacgacaatc actttgaaac caatcttttc cagctcggtt tcatttttaa
      361 tatcacgttc gcgatttttt gtgatttttt ccaaccaaaa atccatattg cttttcggga
      421 tatgtccttt attacaagaa tgcccgtgcc aaaaacagcc gtgtataaac acgactgttt
      481 tatatttagg caaaacgata tccggtttgc ctgcatagcg cttatcgttt ttccgataac
      541 ggaaaccttg ggaaaaaaga aatttcctta ccaatacttc cggtttggtt tctttgctat
      601 ggatttttga catcacgaag gaacgtttgg atggagtgaa aatatcggtc ataaaattta
      661 aggcgatgta ggtttagctc gtttttttgt ttgttccact tttctcaata aatatgaaac
      721 taagctgatt aaatccaaag catccttgtc attaaaaata ctaggagata aatttgctct
      781 taactcatgt tgcacaggat ttctaaatcc agtccatgtt ccgcatgcaa gctgttcaag
      841 accatcttct aaattttgtt ccgcctgcgt tttgttattc gttaatagaa gcatagattt
      901 tttactcccg aaggcttttt caatcaattc tcttccgtct atgctatgaa gacctgtctg
      961 cttctgaacc ttatcttcga aaactttaac tgcctcgatt gcagcactta aataatcctt
     1021 cttttcattg taaaaatcgt tacaggcagt atgcaaatcc tgatgcaaat gccgccaatg
     1081 atagtaagga tattctggaa taatactatg taaggcagag attacttccg cttgttcttt
     1141 atttgtaagc tccgaatctt ccaaacgatt caaaataact tctaccggtt ctctttcctt
     1201 ttctggcaat ttgtttttcc aattttcgat atcaactccg ctttcacctt tcacttcgta
     1261 atctttctct ttttttcttc tttttctcca atcttgcccg atggctcaga cgatttcccc
     1321 aaggaaaacc cgtaattttg aagttttagg atgcttccaa tccaatgatg tcctatctgt
     1381 agcgattaaa tcttcaccat cattatctat aaaatcaata cttaaccatc ctgtcagata
     1441 ggattagaaa tggctggatt cgctatcagt gaaaaactcg ggcatattta ccattctgcc
     1501 gttggcaaac aaggtaatac ctttcatatt attctttaaa ggtttttccg ttgtaatgaa
     1561 cttaccttgt attaatccgc tgtattcata ctgttcgaat tttgaagata acgatgaaat
     1621 attggttgct agatcctggt attcccattc gaattgtggg gtaacaagat tatattttag
     1681 gtttccgtca atgattcttg gttccgagcc gttcaagctt actttgattt taaaatcctg
     1741 agccggaaaa tcaaataaac gggaaagatg ccccacataa ttatctaacg ggtatccttg
     1801 ttttttcgtc agctcggtta aagttatagt tgttccgttt tcggtattgg gtttaacaga
     1861 ctctttctga aactccggtt gataaatacg ctcacttttt ttaatctctg cataatccaa
     1921 agtaaaagta acccgttcgt ttccttggat agtagagatt tcgattttgt tgccaagcct
     1981 gaataatgcc aatttaccaa gacctttttt acccgttgga attcttccgc acggggaggc
     2041 ttgtttttct tcccttctgt tccgaccgat tctcaaataa aaatcattga tttcatcgaa
     2101 gctcattcct atgccattat ctttaataac gattttatgc tccggtttat cgaataacct
     2161 aacttccact tccgtagcac atgcatcgta ggcattcgct atcaactcgg caatcgcagg
     2221 aacagtgtgc gaatacatct ttacacccaa atgttcgatt acggttggct cgaaactcat
     2281 tttcaatttt tcttcagaca tgttttctcc ttttctaaca ttcgatatta tcaacaattg
     2341 ccctgcctat tttttccgca tacatcggag gaacggcatt accaatcaaa cgggctatct
     2401 tgtccctact gcccgcttta aagacatagt tacgagggaa cgattgcaat gttgcacctt
     2461 ctcgcaggga taacgcccta tcttcttcag gatgggcaaa ccgcccgttg gaaatgctaa
     2521 agaatttggt cgttatggta ggtgcgggct tatcccacca tagcctaccg aacgtgtctt
     2581 taaaactatt gtcttttccg ataaaacatt ccagctgtaa ttcgggaata tgcgcaaaag
     2641 ccaaacggtt tcctccgttt ttaggtatca aagccaatcg tttcaaattg atatcggata
     2701 atcccgcaca actatgcata aaatccgtct cgtcttgatg tcctgccata attttgggaa
     2761 agccgttttc cattcccaaa acatcgcgta ccgtaagccg tttgcccgaa tacttgactg
     2821 gttccagctt tttttggtta ttctgtttgc aattaacgta aatcttttac ggctttgggg
     2881 aattccgtaa tcagccgtat tgtgaatacc gaaatggacg gtaaatcctt tttcttccaa
     2941 taactttatg aaattatcaa gcccgctttc tttcattctg ctcagaattc ccggtacgtt
     3001 ctctacaaca acatatccgg gattgaaata ttctacaaac cgctgaaact ccaaaagcaa
     3061 actcttggat ttttccgatt ttcttttgtc tgtttgaata acactccaat attgacaagg
     3121 actacaacct ataagaatca aatcatcatc attctttttt aagccgagtt ctttttccaa
     3181 ggtttcaggc tgcaattcaa aaatatcagc ctgtataaat ttggcattta tattggcttc
     3241 atatgtttct ttgcagctaa gttcgtaatc tatcccggct aaagcggatt acattccata
     3301 gctcattccg cctccgccac agaaaaaatc aaccgccttt aacttactgt ttttcatttc
     3361 tatttaaata attagac
//
LOCUS       DAWXHA010000145         3284 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.145, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000145 DAWXHA010000000
VERSION     DAWXHA010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.145"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(49..786)
                     /gene="ubiE"
                     /locus_tag="AABD07_001944"
     CDS             complement(49..786)
                     /gene="ubiE"
                     /locus_tag="AABD07_001944"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HFB2356408.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTIHTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTYKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGRLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(829..1197)
                     /locus_tag="AABD07_001945"
     CDS             complement(829..1197)
                     /locus_tag="AABD07_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HFB2356409.1"
                     /translation="MNNIPVEIRLLKNRAVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            1317..2936
                     /gene="mnmC"
                     /locus_tag="AABD07_001946"
     CDS             1317..2936
                     /gene="mnmC"
                     /locus_tag="AABD07_001946"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HFB2356410.1"
                     /translation="MDNLVWDGIPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDSECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKSDKPWFALPQTSERKKPEHVLVIGAGIAGASTAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTGQTELLLAGYGYTKRLLGHILPDSDTWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITSAEAEKIAGIPLNTPYAEPLCGLYWQHGVW
                     LNPPAFVRTLLSHPLIELYENTTLTGISHDGEKWIASTPNGTFTATHIIYCTGAHSPC
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SNTGWNEAEEASNRQALAHLNPALAESLFAANPNPQKHQGHAAIRCDSPDHLPVVGAL
                     GDIAAMRQTYAKLALDKNYRIDTTCPYLPNAYTNTAHGTRGLATAPICAAAVAAEILG
                     LPHLFSQRLRHALHPNRTVIRAIVRRQNLIP"
     gene            complement(3050..3160)
                     /locus_tag="AABD07_001947"
                     /pseudo
     CDS             complement(3050..3160)
                     /locus_tag="AABD07_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245460.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
BASE COUNT          840 a         1095 c          666 g          683 t
ORIGIN      
        1 tgccgtctga aacgtgttca gacggcattg gcttcacagg cagtccgttt aaaatttcac
       61 gcccttatgc agcgcgacga tgcccgcact catattgtga taatccacgc tgtcgaagcc
      121 tgcatccagc atcatctgtt tcaaagtttc ctgatcgggg tgcatacgga tggattcggc
      181 gagatactgg tagctgtccg catctttggc aatcagcctg cccatcaccg gcaacagctt
      241 gaaagaataa aaatcgtatg cgccttcgag cggcttgtag attttggaaa actccaacac
      301 cagcaacgta ccgcccggtt tcaaaacacg gtacatttcc ttaagcgcgg catctttata
      361 cgtcatgttc cgcaagccga acgccacgga gaccaagttg aaataattgt cggggaaagg
      421 cagtttttcc gcatcggcaa gcgacacggg taaaatcatg ccttcgttca acagacggtc
      481 gcgcccgacg gtcagcatag aagaattaat atcggtcagc caaacctcgc cttccttgcc
      541 gacccgtttc gcccaaccgc gcgacaaatc gcccgtaccg cccgcaatgt ccaacacttt
      601 atcgcctttt ttcaggtgcg ccgtatggat ggtaaaatgc ttccatacgc ggtgcagccc
      661 tgccgacatc acatcattca taatgtcgta gtttttggcg acggagtgaa acacttccgc
      721 cacttttccg gctttctcat cttcgttgac cgtgctgaac ccgaaatgcg ttttttgtcc
      781 gcccatattc taaccacctc cctgataccg ccctacggca tcccaaactt aacaatctga
      841 ttgcttttca aaacgcgacg cgcccgccgc cgccaatttg tccaaatatt cctgccacat
      901 cgcatcgtat ccgtatgcca gtctgtgcag atacgcccaa tcgtaaagac cgctgtcgtg
      961 cccgtccgaa aaactgattt tcagcgcata ctgtccgaca ggctgcaaat ccgtaatctg
     1021 cacatccgcc ttaccggtct gcaaaacatc ctgtcccacg ccgtgtccgc gcacttccgc
     1081 actcggcgaa tagacgcgta aaaattcggc aggcagattt ttaggttcgt ccccataagt
     1141 caaaaccaac acggcacggt ttttcaacaa acggatttca acaggaatat tattcaaaaa
     1201 acacctcggt tcggcataca atatccggca ggcgtacgcg tgcctttaaa cggcgcgtat
     1261 tttaacagct ttatcccgat accgatattc aaacccacac ttcagacggc attgatatgg
     1321 acaatctcgt atgggacggc attcccgaca tccgcacact cgaccaaacc atccgcaaac
     1381 acgcacaccc gctcaacctg attgtctgcc tccccgataa tcagattccc gattttcaaa
     1441 ccgcacaaga tgcttcggac tcggaatgcc gtctgaagca ccgtttggat caggcaaccc
     1501 agtgcctcca gttcgacagc atcaacctca tcgaacacat cctgcccgat gtccgcttct
     1561 ggctggttcc cccttcacgc acccgccgcc tgcacgaaca cttccaccac atttcctggc
     1621 agaccgaagc catcccgcaa accgaaagca agtccgacaa accctggttt gcacttccac
     1681 aaacatccga acggaaaaaa ccggaacacg tcctcgtcat cggtgcaggc attgccggcg
     1741 catcgaccgc ccacgcctta gcatcacacg gcatttccgt taccgtattg gaagcccgaa
     1801 aagccgctca agccgccagc ggcaaccggc aagggctgct ttacgccaaa atctcgccgc
     1861 acgacaccgg acagaccgaa ctgctgcttg ccggctacgg ctacaccaaa cgcctgctcg
     1921 gacacatcct gcccgactcc gacacttggg gcggcaacgg catcatccac ctcaattaca
     1981 gccgcaccga acaacaacgc aatcacgaat tgggtttgca aaaacaccat aaccacctct
     2041 accgcagcat cacgtctgca gaagccgaaa aaatcgccgg catcccgctg aacacgccct
     2101 acgccgaacc attatgcgga ctctactggc aacacggcgt atggctcaat ccgcccgcat
     2161 tcgtccgcac cctcctcagc catccgctga tcgaactata tgaaaacaca acgttaaccg
     2221 gcatttccca cgacggagaa aagtggattg caagcacgcc aaacggcaca tttaccgcca
     2281 cacacatcat ctactgcacc ggcgcgcaca gcccctgcct gcccgaaacc aacctcgccg
     2341 ccctacccct caggcaaata cgcggacaaa ccggcctcac accgtccacc ccgttttccg
     2401 aacaactgcg ttgcgccgtt tcaggcgaaa gctacatcag cccgtcgtgg cacggactgc
     2461 actgctacgg cgcgagtttt attcccaaca gcagcaatac cggatggaac gaagccgaag
     2521 aagcctcaaa ccgccaagca ttggcacacc ttaaccccgc ccttgccgaa tcattgtttg
     2581 ccgccaaccc aaacccccaa aaacaccaag ggcacgccgc catacgctgc gacagccccg
     2641 accacctccc cgtcgtcggc gcactcggcg acattgccgc catgcggcag acttacgcca
     2701 aacttgcact ggacaaaaac taccgcatcg acaccacatg cccatatctg cccaatgcct
     2761 acaccaatac cgcccacggc acacgcgggc ttgccaccgc ccccatctgc gccgccgccg
     2821 ttgccgccga aatcctaggc ttgccccatc tcttttcaca acgcctgcgc cacgccctac
     2881 accccaaccg caccgtcatc cgcgccatcg tcagaaggca gaacctgatt ccttaagcct
     2941 ttgccgcatg ccgtcccgac cacaaaaaat catattcaaa taaacatacc aatcctgacg
     3001 gtaaaatatc gaaaacaccc ataacgtttt cttcccaaaa taaggagtaa ggaatgccta
     3061 acaaattgcc tttgctgtcc aagatgaatt ttccgtaaca ttcgaagact tccttaaccc
     3121 tgccagccgc ttcggtttct gtaccccctg ttagataagg aagggatgaa aaagccctgt
     3181 tacttgtatg aagcaaaggg cgttaatttt tgttaatctt cccttctcag gaactcaata
     3241 tataaggatg ttaattttta tttcccttct cgaggactca atag
//
LOCUS       DAWXHA010000146         3272 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.146, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000146 DAWXHA010000000
VERSION     DAWXHA010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3272
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.146"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..173
                     /locus_tag="AABD07_001948"
     CDS             <1..173
                     /locus_tag="AABD07_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
                     /protein_id="HFB2356411.1"
                     /translation="EPLPPSALSESEANRDLGWMLHDIDFDHGNTPHFFRTQMKDGLI
                     DVPPFYAEEVKA"
     gene            170..1036
                     /gene="cas8c"
                     /locus_tag="AABD07_001949"
     CDS             170..1036
                     /gene="cas8c"
                     /locus_tag="AABD07_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
                     /protein_id="HFB2356412.1"
                     /translation="MILASLVRYYRRLATETDETGNPKVPSYGFSEEKIGWILVLDKE
                     GRLKTVVPNLTADKKPQPKLMSVPRPEKRTSGIKPNFLWDKTAYALGVEANKNKAEAK
                     EKPFTPSEKTFEAFKQYHLDLLQNSEDEGLQALCRFLQNWQPAHFAAENLPAEMLDSN
                     TAFSLEKPTALIHKREAAQTLWAGCLKSDEALESLCLISGDTAPIARLHPAIKGVFGG
                     QSSGGSIISFNKEAFSSFGKEQGANAPVSEQSAFAYTTALNYLLRRENNHCLTIGDAS
                     TVFWAEADDIVD"
     gene            1121..1528
                     /locus_tag="AABD07_001950"
     CDS             1121..1528
                     /locus_tag="AABD07_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356413.1"
                     /translation="MHYNATAQAAEGFFAQVFTPSDDEQESAKIFNVLEQIGKGRPLQ
                     EIAPELSPNTRFYILGLAPNAARISVRFWLDTTFGQLAENLAHHWQDLALEPCAWKTP
                     PSIWRLLLQTAVLGKSENIQRLGNRCLPETQNP"
     gene            1476..2236
                     /gene="cas7c"
                     /locus_tag="AABD07_001951"
                     /pseudo
     CDS             1476..2236
                     /gene="cas7c"
                     /locus_tag="AABD07_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777774.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
     gene            2263..2631
                     /locus_tag="AABD07_001952"
     CDS             2263..2631
                     /locus_tag="AABD07_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356414.1"
                     /translation="MKYWLVGASWGGQGHQDQFFVENGYWVLEWESSQQPDQFAKGEK
                     IQVGDRIAIKRMKGQGSSEIKILHIGIVKGVISETNKIICVVDWIVKNLDRNVESRGC
                     FKSIHDPYDKDEWIEKIFCL"
     gene            2638..>3272
                     /gene="cas4"
                     /locus_tag="AABD07_001953"
     CDS             2638..>3272
                     /gene="cas4"
                     /locus_tag="AABD07_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HFB2356415.1"
                     /translation="MTALLTETQRENQDTRLIPLSALQHYAFCPRQCALIHNEQAWAE
                     NYLTAQGKALHERVDSDEPETRKGVRFERTVHVSVEKPGISGILDLVEADTKTGRLKP
                     VEYKRGKPKPDPGDEIQLCAQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDGLRAQ
                     TLATIAAVCKLLNSGQTPPPDYGKRCKACSLAEICQPELLGKRDRSVGYVKG"
BASE COUNT          897 a          799 c          854 g          722 t
ORIGIN      
        1 gtgaaccgct gccgccgtcg gcgttatcgg aaagcgaggc aaaccgcgat ttgggctgga
       61 tgctgcacga tattgatttt gatcacggca acacgccgca ttttttccgc acgcaaatga
      121 aagacggctt gattgatgtg ccgccgtttt acgccgagga ggtgaaagca tgattcttgc
      181 gtcccttgtc cgctattacc gccgtttggc aacggaaacc gatgaaacgg gcaacccgaa
      241 agtgccgtct tatggtttta gcgaggagaa aatcggctgg attttggtgt tggataaaga
      301 aggtcgtctg aaaaccgttg tgccgaatct gactgctgat aaaaagccgc agccgaagct
      361 gatgagtgtg ccgcgccctg aaaaacgcac gtcgggtatc aaaccgaatt ttttgtggga
      421 taaaaccgcc tacgcgcttg gcgtggaagc caataaaaac aaagccgaag ccaaagaaaa
      481 accgtttacg ccgtctgaaa aaacctttga agccttcaag caataccatc tcgatttact
      541 gcaaaacagc gaagacgaag gtttacaagc cttatgccgt tttctgcaaa actggcagcc
      601 tgcacatttc gctgccgaaa acctgcctgc cgaaatgctt gattccaaca ccgcattttc
      661 tcttgaaaaa ccgaccgctc ttatccataa acgcgaagcc gcgcaaacct tgtgggcagg
      721 ctgcctgaaa agtgatgaag cactcgaaag cttatgcctg attagcggcg acaccgcgcc
      781 gattgcacgg ctgcatccgg cgattaaagg cgtgtttggc gggcaaagct ccggcggttc
      841 gattatttcg tttaataaag aagccttttc ctctttcgga aaagagcaag gcgcaaatgc
      901 gcctgtttcc gaacaatccg cctttgccta caccaccgcg ctgaactatc tcttgcgccg
      961 cgaaaataat cactgcctga ccataggcga tgccagcacg gtcttttggg cggaagcgga
     1021 tgatatagtg gattaaattt aaatcaggac aaggcggcga aaccgcagac agtacaaata
     1081 gtacggcaag gcgaggcaac gccgtactgg tttaaattta atccactata acgccacggc
     1141 gcaggctgcc gaaggcttct tcgcgcaagt gtttacgccg tcggatgacg aacaagaaag
     1201 cgccaaaatt ttcaacgtat tggaacaaat cggcaaaggt cgtccgctgc aagaaattgc
     1261 gcctgaactc tctcccaata cccgttttta catcttgggg cttgccccca atgctgcgcg
     1321 gatttctgtt cggttttggc tggacaccac atttgggcag ctggcggaaa acttggcgca
     1381 tcattggcaa gatttagccc ttgagccttg tgcgtggaaa acgccgccgt ctatttggcg
     1441 gctcttgttg caaactgccg tgctgggcaa aagcgaaaac atccaaaggc ttggtaaccg
     1501 atgtctgcct gaaacgcaaa atccgtaatt ttgtcgaaat cagcagcgaa aacgaagccg
     1561 gttacgaaat ctacgtcaaa gaaaaaagcg tgctgaacct gcaaaacaaa cgcgcttatg
     1621 aggcgcttgg cattgagtcg gaagccaaaa actgccgaag gacgaagcca aagcccgtga
     1681 tattaccgct tggatgtgta aaaacttctt tgacatccgc accttcggcg ccgtgatgac
     1741 caccgaagtc aacagcggac aagtgcgcgg cccggtacaa ctggcgtttg cccaatccat
     1801 cgacccgatt gtgccgccgg aagtttccat cacccgcatg gcggtaacca atgaaaaaga
     1861 cttggaaaaa gaacgcacca tggggcgcaa atacatcgtc ccttacgcgc tctaccgcgt
     1921 gcatggcttt atctccgcca accttgccgc caaaaccggt ttttcagacg acgacttagc
     1981 caaactctgg caagccctga cgttgatgtt tgaacacgac cgctccgccg cccgtggcga
     2041 aatggcggca cgcaaactgg ttgttttcaa acacgacagc gcactcggca gccagcctgc
     2101 acataaactg tttgacgccg tgaaagtcga acgcgtaaac ggcgaatcag gtacgcccgc
     2161 aagcggtttt ggcgattaca aaatcagcgt ggtttcagac gggctaaatg gcgtgagtgt
     2221 ggaagagtat ttgtaagttt tcaataaatc aggagtaacg atatgaaata ttggctagtt
     2281 ggagcctctt ggggagggca ggggcatcaa gatcaatttt ttgttgaaaa tggttactgg
     2341 gttttggagt gggaatcctc tcaacaacca gatcaatttg caaaaggaga aaaaatccaa
     2401 gtaggtgatc gaattgcaat caaacgcatg aaaggtcaag gatcgtctga aattaagatt
     2461 ttacatattg gaatcgttaa gggggttatt tctgaaacga acaaaattat ctgtgtcgtt
     2521 gattggatag ttaaaaattt agatagaaat gttgaaagta gaggatgctt taaaagtatt
     2581 catgatccat atgataaaga tgaatggata gaaaaaattt tttgtttgta gcaaaagatg
     2641 accgcacttt taaccgaaac ccaaagggaa aatcaggata cgcgcctgat tcccctttcc
     2701 gccctgcaac actacgcctt ctgcccgcgt caatgtgctt tgattcacaa cgaacaggcg
     2761 tgggcggaga actatttgac cgcgcaaggc aaagcgttac atgagcgggt ggattcggac
     2821 gagccggaaa cgcgcaaggg cgtacgtttt gagcggacgg tacacgtttc ggtagaaaaa
     2881 ccgggcatca gcggcatatt ggatttggtg gaagcggata cgaaaacagg ccgtctgaaa
     2941 cctgtggaat acaaacgagg caagcccaaa cctgacccgg gggatgaaat ccagctttgc
     3001 gcccaaggtt tgtgtttgga agaaatgacg gggcaaaccg tttcagaggg cgcgctgtgg
     3061 tatatgcaaa cccgccaccg cgtccccgtt gtgttttcag acggtctgcg cgcccaaacc
     3121 ctcgccacca tcgccgctgt gtgcaaactc ctaaacagcg gccaaacccc gccgcccgac
     3181 tacggcaaac gctgcaaagc ctgctcgctg gcggagattt gccagccgga gttgctggga
     3241 aaacgggata ggagtgtggg atatgtgaag gg
//
LOCUS       DAWXHA010000147         3267 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.147, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000147 DAWXHA010000000
VERSION     DAWXHA010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.147"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(262..507)
                     /locus_tag="AABD07_001954"
     CDS             complement(262..507)
                     /locus_tag="AABD07_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356416.1"
                     /translation="MLKSIELNSHIRNRLAAYLKGRGLDFQTAMQEEEGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            622..1047
                     /locus_tag="AABD07_001955"
     CDS             622..1047
                     /locus_tag="AABD07_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HFB2356417.1"
                     /translation="MFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDAPRGNPEYVR
                     LSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGRWGSGWVHVKLCLGLMLLAYQLYCGVL
                     LRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            1059..1535
                     /locus_tag="AABD07_001956"
     CDS             1059..1535
                     /locus_tag="AABD07_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HFB2356418.1"
                     /translation="MPIEIERRFLIENDKWRQYADEPLLLKQGYLSVEKERTIRIRIA
                     GKRAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKRRYPVRWGGSLFEVD
                     VFLGENSPLVVAEIELPAENADFDRPDWLGREITSDGMFTNAYLSKHPFSSWKNAV"
     gene            complement(1565..2053)
                     /locus_tag="AABD07_001957"
     CDS             complement(1565..2053)
                     /locus_tag="AABD07_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HFB2356419.1"
                     /translation="MLKITIIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETVASLEVALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPEIDRTHWREAERTERRVSSKGVAYTFVHYL
                     KG"
     gene            complement(2121..3176)
                     /gene="aroG"
                     /locus_tag="AABD07_001958"
     CDS             complement(2121..3176)
                     /gene="aroG"
                     /locus_tag="AABD07_001958"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HFB2356420.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDRRLLVIIGPCSIHDPKAALEYAERLLKLRKRYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAVEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIADQLEQDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANTKRMARAG"
BASE COUNT          706 a          878 c          828 g          855 t
ORIGIN      
        1 aaaaacaaaa aacccctccg ccgtcattcc cgcgaaagcg ggaatctaga attttaatgc
       61 ggcaagaatt tatcggggat ggccggggtt taaaggtctg ggttcccgcc tgcgcgggaa
      121 tgacggttta gaaatcaccc gaaacgagaa aaagaaccga aaccggacaa gtcggattcc
      181 cgcgcgggcg ggaatgacga taagcgtaat ttcaatccgc catattgtct tttcacttgc
      241 ctgaaaacag atttcagccg cctatccctg catccggcgg ctgatgtagt cggcaatcaa
      301 atcccgcttt tcccaaaaaa acttctgcat tttttgttcg gaatacagtt tgcggaccag
      361 agtgggcaga ccgctgtgga cgatggcggc gatttctttg ttgccttctt cttcctgcat
      421 tgccgtctga aaatccaaac ccctgccttt cagatatgct gcaaggcggt tgcggatgtg
      481 tgaattgagt tcgatggatt tgagcatttt gcctccgttt tgcggtaagg atttattcga
      541 tttgtttatc cgcctgattt tatcacgttt cccaagcggt ttgcctgtac aataccgctt
      601 ttcggaaggg tgtgggcgat gatgttttct tggttcaagc tgtttcactt gttttttgtc
      661 atttcgtggt ttgcagggct gttttacctg ccgaggattt tcgtcaatat ggcgatgatt
      721 gatgcgccgc gcggcaatcc cgagtatgtg cgcctgtcgg ggatggcggt gcggttgtac
      781 cgttttatgt cgcctttggg tttcggcgcg gtcgtgttcg gcgcggcgat accgtttgcc
      841 gccggccggt ggggcagcgg ctgggttcac gtcaaactgt gtttgggctt gatgctcttg
      901 gcttatcagt tgtattgcgg cgtgctgctg cgccgttttc aggattacag caatgctttt
      961 tcacaccgct ggtaccgcgt gttcaacgaa atccccgtgc tgctgatggt tgccgcgctg
     1021 tatctggtcg tgttcaaacc gttttgacgg agcatcttat gccgatagaa atcgaacgcc
     1081 gttttttgat tgaaaacgac aaatggcggc aatacgccga tgagccgcta ctgctgaaac
     1141 agggctacct gtctgttgaa aaagaacgca ccatccgcat ccgcattgcc ggaaaacggg
     1201 cgtggctgac gctgaaaggc tatatttcgg aaatcagccg cagcgagttc gaatacgaaa
     1261 tcccgcttgc cgatgcggaa aagatgatgg aaacgatgtg cccgtttaag atggaaaaac
     1321 ggcgttatcc ggtcagatgg ggcggcagcc tgtttgaagt cgatgttttc cttggcgaaa
     1381 actcgccttt ggtcgtcgcg gaaatcgagt tgcccgccga aaatgccgat tttgaccgtc
     1441 cggactggct ggggcgcgaa atcacttcag acggtatgtt taccaatgcc tatttgagca
     1501 aacatccgtt ctcaagctgg aaaaatgccg tctgaagcgg cttcagacgg catctgcctt
     1561 gcggttatcc cttgaggtaa tgcacgaatg tatatgcaac gcctttgctg ctgacacggc
     1621 gttccgtccg ctctgcttct ctccaatgcg tccggtctat ttctgggaaa aatgcatctc
     1681 cttccacaga caaatccact tcggttatcc gcaaatcggt cgctaatggc atcgcttgtc
     1741 cgtatatctg cgcgccgccc ataatgacgg cttcttccgc gccggcgcac aatgccaatg
     1801 ccacctccaa acttgccacc gtttccgcgc ctgccgcgca ataatccgcc tgccggctga
     1861 tgacgatgtt cctccgtccg ggcaggggtt tgacgggcag ggattcccac gttttccgcc
     1921 ccataatgac gggtttgccc aaggtatagg ctttgaaaaa tgcgaaatct tcggggatgt
     1981 gccaaggcat agcattgccc gccccgatgc acaggttttc cgcacacgcc gcaattatgg
     2041 ttattttgag catattttct ccacaaaaat gccgtctgaa cgcttcagac ggcattttat
     2101 gacattctgc gtcaaaaatc tcaacctgcg cgcgccatac gttttgtgtt cgcacccgcc
     2161 aacaatgcca acaattcttc agtcgcgccc caaccgatac acgcatcggt aatgctcttg
     2221 ccgtacactt ccggcttgtc ctgcctgcct tcgaccaaat ggctttccac catcacgccc
     2281 atgatattgc cgccgtcctg ttccaattgg tcggcaatgt cttgtgccac ttccatctgc
     2341 cgggtgtaat ccttgcggct gttggcgtgg ctgcaatcga tcatcagctt gtcggttacc
     2401 cctgccgcac gcagttgttc caccgcctcg ctgacgtgtc ccgcatcata attcggctct
     2461 tttccgccgc gcaaaatgac atgacagtcg ggattgccgc cggtatggac aatggcggaa
     2521 tgcccggcct tggttacaga caagaaatga tgcgaatggc tcgccgcacc gattgcgtcg
     2581 atcgcaatct tcaaattgcc gtccgtaccg tttttaaagc cgacggggca ggacagaccg
     2641 cttgccaatt cgcggtggac ttggctttcg gtcgtccgcg cgccgattgc cccccaagaa
     2701 atcaggtcgg cataatactg gggtgtaatc atatccaaaa attcggtaga ggcaggcatg
     2761 cccatattat tcagggacaa caacagactg cgcgcctgac gcaaaccgaa attgatgtcg
     2821 aacgtaccgt ccaaatgcgg gtcgttaatc aaacctttcc aacccaccgt cgttctcggc
     2881 ttctcgaaat aaacgcgcat cacgatcaaa agctcgtttt cataccgctt gcggagtttc
     2941 aacagacgtt ccgcatattc caacgccgct ttcggatcgt gaatcgaaca cggcccgata
     3001 atgaccaaca gccgcctgtc cctgccgtga accaaatcgg aaatttcctg acgggtgcgg
     3061 tgaaccaagc ccgaagcctc tttggaaatc ggcagctcgt aaagatgggc aatcggcggc
     3121 aacaactctt taacttcttt aatcttaata tcgtctgtgg ggtaatggtg tgtcatcttg
     3181 catctttcct gatgggtttt tatacgctgc ttaggttaca tcgtttacct tgcacaaaca
     3241 agtgcaacat attactacaa agctatt
//
LOCUS       DAWXHA010000148         3190 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.148, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000148 DAWXHA010000000
VERSION     DAWXHA010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.148"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            487..1701
                     /locus_tag="AABD07_001959"
     CDS             487..1701
                     /locus_tag="AABD07_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Replication initiation factor family protein"
                     /protein_id="HFB2356421.1"
                     /translation="MSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFIDWISFTFHEDT
                     LLKVSGCPLFSDAEYMYVLSGKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE
                     VHFGGQRNTVLVELKGTGCSVASPGWELRLKQFIDDSIRPRITRIDLALDFFNGEYTP
                     DQALLDHDNGFFDNSNQRPKSEMIGTAWRNEDGTGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPFPERFNQRNKT
                     LNLTFEHKLRYAKNAVGKLVNFMIEIGFDNSEIVESLKADSGFPKGLEPEKYALEMLR
                     DGLKHGFIHEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDAEKERKYQDYLD
                     EVYHQNVNYDYF"
     gene            1713..2024
                     /locus_tag="AABD07_001960"
     CDS             1713..2024
                     /locus_tag="AABD07_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356422.1"
                     /translation="MFNQNQTVTYPATFLGAKKFKGEIDGSNIDTCSVLVATPLPAQS
                     GNAVGFTAAQMKFGDSRNFSKLENLKYPCEVMVTVEMTSTGKGMVPSLIDFQVAEKPK
                     G"
     gene            2028..2228
                     /locus_tag="AABD07_001961"
     CDS             2028..2228
                     /locus_tag="AABD07_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356423.1"
                     /translation="MKFEERFIVQDLETHDFIYPDPFGDVGFTQNIKSAGQFESYEDA
                     LNSGINEIGGGFQIFQFFVKSE"
     gene            2455..2685
                     /locus_tag="AABD07_001962"
     CDS             2455..2685
                     /locus_tag="AABD07_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356424.1"
                     /translation="MNIVKKYAVKAALAAGIFTPAIVMADTFDAAAIGTQVANVIMGF
                     VSMVSAVGMAAITVILAIQGFKMAWSMIKSVK"
     gene            2713..3015
                     /locus_tag="AABD07_001963"
     CDS             2713..3015
                     /locus_tag="AABD07_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356425.1"
                     /translation="MGYRVGINCFDTRLQADDYLLSSLPPTVTQDGKIIRPERVGDKW
                     ILNGKPVTLSYPECSNFEQIKQGSYVGSTVLILFVVIYGFRLMINFLKDIGKVGTD"
BASE COUNT          961 a          516 c          737 g          976 t
ORIGIN      
        1 gcccccccat ttgccgaaca agcggtccgg attcccgcct tatatgatgc gctctatcaa
       61 aggggcgcat tacttttctt aacattcccc tttgacagcc aagtgaaagg ggctttttta
      121 tgtcagcagc aaatgtaata ttctcctgtt cttactggag aatatttaaa aaatcagatt
      181 cttgtgtttt gtgtttttat cagttcagac atggcgaacc gcataaactc attaatcaag
      241 agaatttttc aaagctttat caggcgttcg attatataga ttcggttggt tcgaattttc
      301 cagtgattat cacaacggat ggttgtggtc ttttttgttg atctttaaca gtttgtcagg
      361 atttggcttt cagccgttga ccgtcgtacg cgctttagcg cggaagacgg gaaacggctg
      421 aaagcccccc cttgactaac agggggggag cgaaattaaa aaccaaattc caagagtagt
      481 gaacgaatga gtgaagttga atatttctca cactttatat cggacggaaa gggaaagctt
      541 ttagaaattc cgcagcgaag aggtaagcaa gacggtgttt ttattgattg gatttcattc
      601 acattccatg aagatacttt actgaaagtt tccgggtgtc ctttattttc tgatgctgaa
      661 tacatgtatg tattaagcgg aaagctggaa gaaattctag gttttggcat aacgcgcaaa
      721 tgcaaatcaa ggggcaacaa attctatgaa tccatgtata ggctaggttc ggatgatgtt
      781 gattatggag aggtgcattt cggaggacag cggaatactg ttctagttga gttgaaaggt
      841 actggttgca gcgttgcaag tccgggttgg gagttgaggt taaagcagtt tattgatgat
      901 tcgataaggc caagaataac gcgaattgac ctagcacttg atttttttaa cggagagtac
      961 acgccggatc aggcattgtt agatcacgat aatgggtttt tcgacaacag taaccaaagg
     1021 ccgaaatctg aaatgatcgg gacggcttgg cggaatgagg acgggaccgg aaagacattt
     1081 tatgtaggtc gcaagaaaaa ttctcgtttt gttcgtgttt atgagaaagg caggcagctt
     1141 ggcgataaag aaagcaagtg ggtaaggttc gaaatccagt ttaattatgg agatattgaa
     1201 atacccttgg atattttaat aaatcagggt tcgtatttct gtggagcttt tccaatttgt
     1261 agaaaattta aaaatatgcc gtttcccgaa aggtttaatc agagaaataa aacgcttaat
     1321 ctaacttttg agcataaatt gcgttatgca aaaaacgcgg ttggaaaact ggtcaatttc
     1381 atgattgaaa taggttttga taatagtgaa attgtggaat ctttaaaggc agattcggga
     1441 tttcctaaag ggttagaacc tgaaaaatat gctctggaaa tgttaaggga cgggttaaaa
     1501 cacggtttta ttcatgaaca gccggatatt gatttggaaa ttgaacttga tgaattgggg
     1561 gttattgctt ttaaaaattc tgacaaattc gatagggaaa aaaggctttt tagtcctgat
     1621 tatgatgccg agaaagaaag gaaatatcag gattatctag atgaagttta tcatcaaaat
     1681 gtaaattatg attattttta aaggaaatca aaatgtttaa tcaaaaccaa actgtaactt
     1741 atcctgcgac ttttttggga gctaaaaaat tcaaaggcga aattgacggc tctaatatag
     1801 atacttgttc tgtgttggtt gcaacacctt taccggcaca gtcggggaat gctgtcggat
     1861 tcacggcggc acaaatgaaa ttcggggaca gtaggaattt ctcaaaatta gagaatctca
     1921 aatacccgtg cgaagttatg gtaacggttg aaatgacttc gacaggtaaa ggcatggttc
     1981 cttcattaat tgattttcag gtggcggaaa aaccgaaagg ttgatttatg aaatttgaag
     2041 aacgtttcat agttcaagat ttagaaacgc atgactttat ttatcccgat ccgttcggtg
     2101 acgtggggtt tactcaaaat attaaatcag caggtcaatt tgaaagttac gaagatgcat
     2161 tgaactcagg cataaatgaa ataggcggag gattccaaat atttcagttc ttcgtgaaat
     2221 cggaataaaa gtaaaacagg ctcggcgggc ggtctgtcaa cctttcacaa agcccgcaaa
     2281 aaggattaaa aatgaataaa gcaactttaa ttatcggatt ttttgtttgc ctcattcttt
     2341 tcattttctc aattctctat ttcataaatt aaaaacaaaa ttcgggagca ggcttctccc
     2401 ggatttaaac ctaagaagcc gtcttacttt aaatatcaaa aaaggaaaaa aacgatgaac
     2461 atcgttaaaa aatacgctgt aaaagcagcc ttggcagccg gtatcttcac accggccatt
     2521 gttatggcag atacctttga tgcagccgca attggtacgc aagtagcgaa tgtaatcatg
     2581 ggtttcgtgt caatggtttc cgccgtgggt atggcggcca ttaccgtgat tcttgcaatc
     2641 caaggcttca aaatggcttg gagcatgatt aaatctgtca aataaacaga gtgaagaaaa
     2701 aggggcgcat gaatgggcta tcgtgtcggc ataaattgtt ttgatacaag attgcaggca
     2761 gacgactatt tattgtcgtc ccttcctcct actgttaccc aggacggaaa aatcatcagg
     2821 ccggaaaggg tgggcgataa atggattttg aacggaaagc cggttacgtt gtcttatccg
     2881 gaatgttcca attttgagca gataaagcaa ggttcttatg tcggttcgac ggttctaatt
     2941 ctgttcgtag tcatttacgg ctttaggctg atgattaatt ttttaaaaga cataggcaag
     3001 gttgggactg attgatggtt attgatttct ggtttcttct tggtttcttc ttggctctgt
     3061 ctgttgcttg gctgttttgg taacggttgg tagaatcggc tttttagagt gttttaaaag
     3121 gtccgaatta tgtttatttc tgaatatcat ttagttaaat ttcaaactga ttcacatatt
     3181 tatagagatt
//
LOCUS       DAWXHA010000149         3140 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.149, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000149 DAWXHA010000000
VERSION     DAWXHA010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.149"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(233..670)
                     /gene="rnhA"
                     /locus_tag="AABD07_001964"
     CDS             complement(233..670)
                     /gene="rnhA"
                     /locus_tag="AABD07_001964"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HFB2356426.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWQELDALVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            783..1652
                     /gene="tehB"
                     /locus_tag="AABD07_001965"
     CDS             783..1652
                     /gene="tehB"
                     /locus_tag="AABD07_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HFB2356427.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKVENLPEVLLSGYSSEEGEWVCL
                     NVLQGDVEVRAPDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSLYCAAADYFY
                     KKYGMSATHSAVAAAQDTVPAGRALDMGCGQGRNALFLGLKGFDVTAADCNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPG"
     gene            complement(1710..2516)
                     /gene="thiD"
                     /locus_tag="AABD07_001966"
     CDS             complement(1710..2516)
                     /gene="thiD"
                     /locus_tag="AABD07_001966"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HFB2356428.1"
                     /translation="MKGSFVQTLAIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCSFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDILTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVIIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
     gene            complement(2944..3019)
                     /locus_tag="AABD07_001967"
     tRNA            complement(2944..3019)
                     /locus_tag="AABD07_001967"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2983..2985),aa:Glu,seq:ttc)
BASE COUNT          696 a          774 c          920 g          750 t
ORIGIN      
        1 atgctgttgt caattaaagt agtatctcgt cattcccgca aaaaacagca actcgaaaca
       61 ctccgtcatt cccgagcagg cgggaatcta gaacttttaa attttcagac ggcttttgaa
      121 tattgccgtt gcccgacgtt ctggattccc gcctgcgcgg gaatgacggt ggaggacgat
      181 gccgtctgaa gcccattagc ggtttcagac ggcatttttg tcggtgcggc aatcaagaaa
      241 actgcgccgc gccacggttt gccaaatcgt cggcgcgttc gttttccgcg tgtcccgcgt
      301 gtcctttaac ccaagtccag ctgacttgat gctgcccgac cagagcgtcg agttcttgcc
      361 acaagtcgtc gtttttgacg ggctgtttgg cggcggtttt ccagccgttg cgcttccaac
      421 cgtgtatcca gttttccatg ccgtttttga cgtattgcga gtcggtgcag atgatgacgg
      481 tgcagcggcg tttgagcgat ttcagccctt cgataacggc ggtcagctcc atgcggttgt
      541 tggtggtttg cgcttcgccg ccgaaaagtt ctttttcgcg gctgccgtag cgcattaata
      601 cgccccagcc gcccgcgccg ggattgcctt tgcacgcgcc gtccgtgtag aggtaaacgg
      661 gtgtgtccat atcgtgcctt tgtgtggtgt ccggcgtgat tataagcggt ttgtgcgtcg
      721 tgccgtctga aagattgcgg cggattgaaa taggcatata atgtgcaact ttatttttga
      781 atatgaagga gcggatagtg ggtcaaagtg gcgagttgtt ttgtttcgga caaatgcctg
      841 tatggaaagt ggaaaacctg ccggaagttt tattgtcggg ttattcgtcc gaggaagggg
      901 aatgggtctg cctgaatgtg ttgcagggcg atgtcgaagt ccgtgcaccg gacggggcgg
      961 cagaggtttg gtcggcggaa agcggcgatt gcgtgtttgc gccgcagcag gtgttttcgg
     1021 tcaaaccgaa aacggacgat gccgaaatcc gtttgtcgct gtattgcgcg gcggcagact
     1081 atttttacaa aaaatacggg atgagtgcca cgcattctgc ggtcgcggcg gcacaggata
     1141 ccgtaccggc gggcagggcg ttggatatgg gctgcggaca ggggcgcaac gcgctgttcc
     1201 tgggtttgaa ggggtttgat gtaaccgctg ccgattgcaa tcccgccgcg ttggcaaacg
     1261 tggcggaact ggcagaggcg gagggtttga acgtccgcac gctggaatat gatttgaacg
     1321 ccgccgccct tcagggcgag tttgattata ttgtggcaac ggtggtgctg atgttcctga
     1381 tgccgcagcg cgtgcccgac gtgattgccg atatgcaggc gcatacggcg gcgggcgggt
     1441 acaacttaat cgtatcggca atggatacgg cggatttccc ctgcccgatg ccgttcccct
     1501 tcaaatttaa agagggcgag ctgaaggatt attatcggga ttgggagctg gtcgaatata
     1561 aagaagaatt gggcgcgatg cacgccaaag acgaaaacgg caacccgata cggtttaaat
     1621 ttgtaactat gctggcgaaa aaaccaggat aagccgcgcc ggacgatgcc gtctgaaccc
     1681 gaaaaggcgt tcagacggca tttttacgtc tagtcccgat acgcccaatg attgaccggc
     1741 ccgtgtcccg cgccgatttc caaagggttt gagattgccg ccgtgatgta ggccttggca
     1801 gtctgtacgg ctttgcaaac gtctaagcct tttgccaact cggcggtaat gcaggcggaa
     1861 aacgtgcagc ccgtgccgtg cgtgtgggcg gtcggaaagc gcgggctgtc caattccagc
     1921 gtttcgtttt gcgtaaacag ccaatccgtg cagcgtccgc ttgtgctgcc gttcaaatgt
     1981 ccgcctttga taatgacatt tttgacaccg taatcaagca ggatttttgc cgcacgttcc
     2041 gcatctttac ggttttcgat atgcacgccc gtcaaggctt ccgcctcggg caggttgggg
     2101 gtcaggatgt ccgtgtccgg cagcagcagg cgcgtcagtg ccgcaacggc ggaatcctgc
     2161 aacagcggcg caccgccttt ggcaatcatc acagggtcga gtacgcgcct gccaaagctg
     2221 cagtgtttca gcttgtcggc aacgcattcg atgatttccg ccgtgccgag cataccgatt
     2281 ttgtaggcgc ggatgtcaaa gtcttccctg attgcttgga tttgtgcggt gatggtttcg
     2341 gtcgggacga gatgaaccgc cgacacgccc aaggtatttt gcgcggtaac ggcggtgatg
     2401 acacacgttc cgaacacgcc gcgcatctga aacgttttca aatccgcctg aatgcccgca
     2461 ccgccgcccg aatccgaacc ggcgatggca agcgtctgca caaaagagcc tttcatttgt
     2521 tcctccttaa tattgcgtcc gataaaaagg gctactgcct gtaaaaaagc aggcaatgcc
     2581 gtctgaaaac cgcagcgcgg ggtttgtggt gcattattat gtcgtattgc aggacaaggc
     2641 acagggcaag gcagcggggt gcatcgtagc aactgataat gaaaaaagag ggcgatgccg
     2701 tctgaaccgc gtgttgcggc gagtataaac cggcacgctt cattcgtcat tcccgcaaaa
     2761 acagaaacct aaaattccgt cattcccgcg caggcgggaa tccggacctt agaacaacag
     2821 caatattcaa agattatctg aaagtttgag gttctagatt cccgttttca cggcaatgac
     2881 gaaaaattgc gggaataacg attcataata aaaaacctgc ttgaaacaag caggtttttg
     2941 aattggcacg cccacgggga ttcgaacccc ggttgccgcc gtgaaagggc agtgtcctag
     3001 gcctctagac gatgggcgcg tggaaacgga cattatacat acttatagaa atttagcaat
     3061 acgatgccgt ctaaacgaat gtcagggggc gtttgtctga ccgtatcaca agataaaaaa
     3121 cattggaata tcaagcaatt
//
LOCUS       DAWXHA010000150         3131 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.150, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000150 DAWXHA010000000
VERSION     DAWXHA010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.150"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(39..764)
                     /locus_tag="AABD07_001968"
     CDS             complement(39..764)
                     /locus_tag="AABD07_001968"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HFB2356429.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(834..1337)
                     /gene="fur"
                     /locus_tag="AABD07_001969"
     CDS             complement(834..1337)
                     /gene="fur"
                     /locus_tag="AABD07_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HFB2356430.1"
                     /translation="MIVGKQAEIAYYSVYYFTGILNIMEKFSNIAQLKDSGLKVTGPR
                     LKILDLFEKHAEEHLSAEDVYRILLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGK
                     AVYELDKGDHHDHIVCVKCGEVTEFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSD
                     CQAKGKR"
     gene            complement(1334..1480)
                     /locus_tag="AABD07_001970"
     CDS             complement(1334..1480)
                     /locus_tag="AABD07_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HFB2356431.1"
                     /translation="MQIGMSSVALLEYFIKANDNHTLKRYFTLSVSDCPSAVAVLLLR
                     TAMV"
     gene            1495..1872
                     /locus_tag="AABD07_001971"
     CDS             1495..1872
                     /locus_tag="AABD07_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HFB2356432.1"
                     /translation="MNKTLILALSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     TALRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDALQNAAEALRAKQNADKQ"
     gene            1882..2691
                     /gene="dapB"
                     /locus_tag="AABD07_001972"
     CDS             1882..2691
                     /gene="dapB"
                     /locus_tag="AABD07_001972"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HFB2356433.1"
                     /translation="MIPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIRAAAEKTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGNRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(2805..3119)
                     /locus_tag="AABD07_001973"
     CDS             complement(2805..3119)
                     /locus_tag="AABD07_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356434.1"
                     /translation="MFHLFFVNFYFRQLCPTPNYTDWVKIKFKQFSYLKFIYGYATEN
                     QDKDIDNTLELGELKQDDEILDYGGALALIGRRYNLPTSFIIDIVCREIELEFLDQES
                     FN"
BASE COUNT          803 a         1016 c          687 g          625 t
ORIGIN      
        1 tccactatat ttgaacctga ccgaagcata agccgccatc aaagcccctt gcacgccact
       61 tcgcgccgcc cgatttcctc tttcaacggc acggcgttca acatccgcag acgttcggca
      121 aaatccgcaa acggcagcag ctccgaaccg aaacggcgca tatgttccgt gtcctgctgg
      181 cagtctatca gttccacgcc caaatccgcc aaaaacggca cggcgcaggc aaacgcgatt
      241 ttcgacgcat ccggttgcaa cgcaaacatc gattcgccat aaaacaccct gccgatctga
      301 acgccgtaaa agccgcccgc caacctcgtt ttaccgtttt catcgggata atggcactcg
      361 aaagaatgcg cgtgtcccat ttcgtgcagc ttcaaatatg ccgtctgaaa ctcgggcgca
      421 atccaagtcc catcctgatt cgggcgcgcc gctgccgcac aatgcgcgac aacttccgca
      481 aaacagccgt tgaccgcaac ccgatagctg ccgttacgca gcgttttcgc cagcgagcgc
      541 ggaacgtgca gacgttcggg aacaattacc gcacgcggcc cgaccgcata ccaaaaaaac
      601 caaccgtccc gcgaaaacca aggaaacacg ccgttccgat acgcctcgag cagccgcccc
      661 gcgtccaaat ccctgctcac gccgaccagc ccgtcgcacc gggccaaagc ataggcagga
      721 tcgggaaagg cataattgtc aggggcaagc agcggaatac gcatggcagt tctccaaaaa
      781 cacagacggc atccaaaatc atgaatgccg tctgaacaac aaaccgtccg gatttaacgt
      841 ttgcccttgg cctgacagtc gctgcacacg ccgtacatat aaagcgcgtg atcgacgatg
      901 cggtagccgt tttcctcggc gattttgtct tgcagggctt cgatttcggg attgtggaat
      961 tccgttacct cgccgcactt cacgcagacg atatggtcgt ggtggtcgcc cttgtccaac
     1021 tcataaaccg ccttgcccgt ttcaaaatgg tggcgttgca gaatgcccgc ctgctcgaac
     1081 tgcgtcagca cgcggtaaat cgtcgccaca ccgatttcca cgccctcttc cagcagaatg
     1141 cggtacacat cttccgcact caaatgctct tccgcgtgct tctcgaacaa atccaaaatc
     1201 ttcaaacgcg ggccggtaac cttcagaccg ctgtctttca gttgcgcaat gttgctgaat
     1261 ttttccataa tattcaatat ccctgtaaaa taatagacgc tataatacgc aatttcagcc
     1321 tgcttgccca ctatcacacc atagcagttc gcaatagcaa aaccgcaacg gcggacgggc
     1381 agtcggacac agacagggta aaataccgct taagcgtatg attatcgttc gcttttataa
     1441 aatattcaag cagtgctaca ctagacatcc cgatttgcac agaaaggttc tcccgtgaac
     1501 aaaaccctca tcctcgccct ttccgccctg ttcagcctga ccgcgtgcag cgtcgaacgc
     1561 gtctcgctgt ttccctccta caaactcaaa atcatccaag gcaacgaact cgaaccgcgc
     1621 gccgttaccg ccctgcgccc cggcatgacc aaagaccaag tcctgctcct gctcggcagc
     1681 cccatactgc gcgacgcttt ccataccgac cgctgggact ataccttcaa cacctcccgc
     1741 aacggcatca tcaaagaacg cagcaacctg accgtctatt ttgaaaacgg cgtactcgtc
     1801 cgcaccgaag gcgacgccct ccaaaatgcc gccgaagccc tccgcgcgaa acaaaacgca
     1861 gacaaacaat aaggaacaca catgataccg ctcaaaatcg ccatcgccgg cgcaaacggc
     1921 cgcatgggac gcgtcctcgt cgaagccgtc aacaaccatc ccgacaccgt cctttccggc
     1981 gcgctcgaac actcaggctc agaagccctc gggctggacg cgggctacgc cgtcggactc
     2041 aaaaccggca tcgccatttc agacgacgtt gacgccgttc tcgcccaaag cgacgtactc
     2101 atcgacttca cccgccccga gccgaccctc aagcacctgc aaaaatgcgt tgaaaaacaa
     2161 gtcaacatca tcatcggcac aacaggcttc gacgatgcgg gcaaagccgc catccgcgcc
     2221 gccgccgaaa aaacaggcat cgttttcgcc gccaacttca gcgtcggcgt caacctcacc
     2281 ttccacatcc tcgacaccgt cgcccgcgtc ctcaacgaag gctacgacat cgaaatcatc
     2341 gaaggccacc accgccacaa agtcgatgcc cccagcggca cagcattacg aatgggcgaa
     2401 gtcatcgccg gcgcgctcgg ccgcgacctc aaacaatgcg ccgtttacgg ccgcgaaggc
     2461 cacactggtc cgcgcgatcc ttccaccatc ggctttgcca ccgtccgcgc aggcgacata
     2521 gtcggcgacc acaccgccct cttcgccacc gacggcgaac gcgtggaaat cacccacaaa
     2581 gccggcaacc gcatgacctt tgccgccggt gccgtccgcg ccgcagtttg ggtaaacggc
     2641 aaaacgggtt tgtacgatat gcaggacgta ctcgggctga acaaccgtta acccccatac
     2701 aaaatgccgt ctgaaaagat attgttcaga cggcattttg ccgacaggct tcgtatcggc
     2761 atatcaataa agttgcttgt gcagcatgac aagctacggc tcgtttaatt gaaactctcc
     2821 tgatctaaaa attccaactc tatttcccgg caaactatat ctatgataaa actggtcgga
     2881 agattatacc tacgccctat taatgccagt gcacctccat aatccaagat ttcatcatcc
     2941 tgctttaatt ctccaagctc caaggtatta tcgatatctt tatcttggtt ctccgtagcg
     3001 tatccataga taaatttcag atagctgaac tgcttgaatt taatttttac ccagtctgtg
     3061 taatttggtg taggacacaa ttgcctaaaa tagaaattta cgaagaacaa atgaaacaag
     3121 gtacgtaagc g
//
LOCUS       DAWXHA010000151         3103 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.151, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000151 DAWXHA010000000
VERSION     DAWXHA010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.151"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(47..142)
                     /locus_tag="AABD07_001974"
     CDS             complement(47..142)
                     /locus_tag="AABD07_001974"
                     /inference="COORDINATES: protein motif:HMM:NF026993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356435.1"
                     /translation="MRQPASKPHFNIRDSNLDTGHVDGTHGHYNF"
     gene            complement(162..638)
                     /locus_tag="AABD07_001975"
     CDS             complement(162..638)
                     /locus_tag="AABD07_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HFB2356436.1"
                     /translation="MEHLFGKWLPDLPAPVSDGIDLPMSRLLKARSLTAALCALPHTF
                     SVELLKLGEAETEYGRRRVRDVLLKLDGTAVVQARSACSVGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSSEGCGRYFAARRSRFSHQGEEMLLTEYFLPELKRFIG"
     gene            complement(653..1300)
                     /gene="bioD"
                     /locus_tag="AABD07_001976"
     CDS             complement(653..1300)
                     /gene="bioD"
                     /locus_tag="AABD07_001976"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HFB2356437.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADEQRLTMPEIFSHPASPHLAARLDGRGLDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTEKLLTIDHIQQQAYPVILVTSGRLGSINHTLLSFV
                     VLKQYGIRLHSLVFNHIHDSRDAHVAQDSLNYLQCRLKADFPEAEWMELAKTGAV"
     gene            complement(1297..2598)
                     /gene="bioA"
                     /locus_tag="AABD07_001977"
     CDS             complement(1297..2598)
                     /gene="bioA"
                     /locus_tag="AABD07_001977"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HFB2356438.1"
                     /translation="MPSEHQHTSSLLNFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVENQMKQMAHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPKNRFDDEWDGADLQPVRALFEAHHVDIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELEKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGILTKLADKTVQILKEHSK"
     gene            complement(2816..3040)
                     /locus_tag="AABD07_001978"
     CDS             complement(2816..3040)
                     /locus_tag="AABD07_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356439.1"
                     /translation="MSVWDIWDRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMPESPDFANAVAMAVAMICIVFIYD"
BASE COUNT          765 a          901 c          718 g          719 t
ORIGIN      
        1 agaaaacgat tcctacttat tatttctatt atattcatat ttcttactaa aaattatagt
       61 gtccgtgagt accatcgaca tgtcctgtat ctaaattgga gtctcttata ttaaaatgtg
      121 gtttagatgc aggttgccgc acagcttgaa aaaacggtat tttatccgat aaagcgtttc
      181 agttcgggca gaaaatactc ggtcagcagc atttcctcgc cttgatggga aaaccgagaa
      241 cgccgcgcgg caaagtaccg tccgcatcct tcactggaaa cggcaaactc aaacgccgaa
      301 cgcgcccctt ccaaatcggc ttgaaacaga cgctcgccca aagggcgtgt gccgcagtcc
      361 aaaatgtttt gccaaaacgc cgaaccgacg ctgcacgcgc ttcgtgcctg cacaacagca
      421 gtgccgtcca gtttcagaag cacatcgcgc accctccgcc gtccgtattc cgtttccgct
      481 tcgcccagtt tcagcagttc caccgaaaat gtatgcggca aggcgcacaa tgcggcggtc
      541 agcgaccggg ctttcaataa ccggctcatc ggcaggtcga tgccgtctga aacgggggcg
      601 ggcaagtcgg gcagccattt cccaaatagg tgttccatat ctttcccaat ctttataccg
      661 cgcctgtttt tgccaactcc atccattccg cttcgggaaa atcggctttc agacggcatt
      721 gcagatagtt caggctgtct tgggcgacgt gtgcgtcgcg gctgtcgtgg atgtggttaa
      781 acacgaggct gtgcaggcga atgccgtatt gtttgagcac gacgaaactg agcagggtgt
      841 gattaatgct tcccagccgt ccgctggtaa caaggatgac gggataagcc tgttgctgaa
      901 tatgatcaat ggttaacagc ttttccgtca gtggtaccat caacccgccc gcgccttcga
      961 ccaaaacgac ttcgtactgc gccgccaatt cttgtgtggc ggtgcggatt ttgtccaagt
     1021 ccaaacccct gccgtccagt cgggcggcaa ggtggggcga ggcgggatgg ctgaagattt
     1081 caggcatagt cagacgctgt tcatcagctt cctgcatggg tatgcccatg attttacggt
     1141 ggacggcgat gtcttcggcg atgtcttggc aaccggtttg cacgggcttt tgcgtaatca
     1201 cgcttttgcc ctgctgcaac aattgttttg ccaacatacc ggtggcgacg gttttgccga
     1261 tgtccgtgtc tataccgctg acgaagtaaa cgcctttcat ttgctgtgtt ccttcaagat
     1321 ttgcacggtt ttatcggcaa gtttggtcaa aatgccgtct gaaatgatat agggcggcat
     1381 cagatacacc agcctgccga acgggcgtac ccaaatgccc tgcgccacgc aatccgcttg
     1441 aaaacgcgcc atatccacgc ctttttccaa ctctatcacg ccgatagcac ccaaaacgcg
     1501 cacgtctttc acgccgcgaa tgtcccacgc ggctttcaga cggcctttta agatgctttc
     1561 gatacggcgg atatttgcct gccagtcttg ggataaaagc agcttgaccg aagcacaggc
     1621 aacggcacac gccagcgggt tcgccataaa tgtcgggccg tgcataaaca cgcccgcttc
     1681 gccgcgtgaa atcgtttcgg taactttttg cgaagtgatt gccgccgcca gcgtcatata
     1741 gccgccgctc aaacccttgc cgatacacat aatatccggc acgacctccg cgtgttcgca
     1801 ggcaaacatc ttgcccgtgc gcccgaatcc ggtggcgatt tcgtcaaaaa tcaacacgat
     1861 atcaaattcg tcgcacaaat cgcgcaagcc gcgaagatac tgcggatgat aaaaatacat
     1921 gccgcccgcg ccttgcacga ccggttctaa aataaaggcg gcaatatcca catgatgcgc
     1981 ttcaaacaag gcgcggacag gctgcaaatc cgccccgtcc cattcatcgt cgaaacggtt
     2041 tttcggatta tcgacaaaat aacgctgcgg caacgcgctg ccgaaaatat ggtgcatccc
     2101 cgtttccgga tcacaaacgg acatcgcgtt ccaagtatcg ccgtgatacc cgcgccgtac
     2161 cgtcgcaata ttctgcttcg ccgtcagacc ccgcgcctgc tggtattgca ccgccatttt
     2221 caacgcgact tctaccgaaa ccgaacccga atccgcataa aaaatacggt ccagcccctg
     2281 cggcaaaatc ccgaccaaca acttgcccag ctccaccgcc ggctcgtgcg tcaggccgcc
     2341 gaacatcacg tgcgccattt gtttcatctg attctcaacc gcctgattca aaacgggatg
     2401 attgtaaccg tgtatcgcac accaccaaga cgacatcccg tcaatcagcc gcgtgccgtc
     2461 cgccaattcg ataaacaccc cttctgcacg tttgacagga taaacgggaa gcggatcggt
     2521 catggaagta tagggatgga gcagatgggt acggtcgaaa ttaagtaatg atgatgtgtg
     2581 ttgatgttca gacggcataa gtttctctct tttcttatta ctgcattcaa acgcaaaaag
     2641 cgtattctac tccgacagac cgcttcccac acctttccat ccgtttcggg cgaaaaaccg
     2701 cgaaacaaat cgtccgcaac ataagcgcac accgtttcgc attcctcaag cctgattgga
     2761 atcagacgac ccaacgccca ataccgtttc acacagcctc cgcccaacgc ttcaatcaat
     2821 catagataaa tacgatacag atcatagcaa cagccatcgc aacagcgttg gcaaaatcag
     2881 gggactccgg cataggcgca tagcatctgc cgatgcacgg ctcctcattc ggctctatga
     2941 ataccatacc catcacaaaa tccactgcta aaaccaggca cggcttctta tacttatgat
     3001 agatttccac catcctgtcc catatatccc aaacactcat accgtatatc ccgcaggcaa
     3061 caaattccga ttgaaggtta cagccctatt ttatagtgga tta
//
LOCUS       DAWXHA010000152         2933 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.152, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000152 DAWXHA010000000
VERSION     DAWXHA010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.152"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..378)
                     /locus_tag="AABD07_001979"
     CDS             complement(<1..378)
                     /locus_tag="AABD07_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356440.1"
                     /translation="MPTDPDSRLRGNDEAILLAEGQKSAVTEYYLNNGIWPKDNTSAG
                     VASSSSIKGKYVKEVEVKNGVVTAEMKSDGVNKEIKGKRLSLWARRENGSVKWFCGQP
                     VKRDAGAKTGADDVKADGKDTDKI"
     gene            complement(485..1408)
                     /locus_tag="AABD07_001980"
     CDS             complement(485..1408)
                     /locus_tag="AABD07_001980"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HFB2356441.1"
                     /translation="MLQRTLAKSIGVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLNPYLINDTRLSSTIVTDKGLRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSPPTFEIDFAGKSYIGEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IGDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAVNNALLRAV
                     LADETAYEWVEFADSDDLPDAFHELNIRNCG"
     gene            complement(1936..2367)
                     /locus_tag="AABD07_001981"
     CDS             complement(1936..2367)
                     /locus_tag="AABD07_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356442.1"
                     /translation="MPTDPDSRLRGNDEAILLAEGQKSAVTEYYLNHGIWPEDNDKAG
                     VASSSSIKGKYVKEVKVENGVVTATMNSSNVNKEIKDKRLSLWAKRENGSVKWFCGQP
                     VTRAAKDDDAVTADGTDGANGTKIETKHLPSTCRDTSSAGT"
     gene            complement(2463..2867)
                     /locus_tag="AABD07_001982"
     CDS             complement(2463..2867)
                     /locus_tag="AABD07_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356443.1"
                     /translation="MAEGQKSAVTEYYLNHGIWPKDNTSAGVASSSSIKGKYVKEVKV
                     ENGVVTATMNSSGVNKEIQGKRLSLWGRRENGSVKWFCGQPVTRAKADADADAAGKDT
                     TNIDTKHLPSTCRDAASAVCIETPPTAFYKNT"
BASE COUNT          605 a          728 c          826 g          774 t
ORIGIN      
        1 gattttgtcg gtgtctttgc cgtcggcttt gacgtcgtcg gcgccggttt tggcgccggc
       61 gtcgcgctta accggctgtc cgcagaacca ttttaccgaa ccgttttcac gcctggccca
      121 cagggagagt cttttgcctt tgatttcttt gtttacgccg tctgatttca tttcggcggt
      181 aacgacgccg tttttaactt caacctcttt aacatatttg cctttgattg atgaagaaga
      241 tgccacgccg gcagaagtgt tgtctttcgg ccatatgccg ttattcaggt aatactcggt
      301 aacggctgat ttttgacctt cggccaaaag gatggcttcg tcattcccgc gcaggcggga
      361 atccgggtct gtcggcacgg aaacttatcg ggtaaaacgg tttcttcaga ttttacgtcc
      421 tagattcccg cccgcgcggg aatgacggca tctgtttgac ggcatttgtt tggaaaaggg
      481 ggcgttatcc gcaatttctg atgttcagct cgtgaaatgc gtcgggcaaa tcatcgctgt
      541 cggcaaattc cacccattcg taagccgttt cgtctgccaa aactgcgcgc aaaagggcgt
      601 tgttgacggc gtgtcccgat ttgtagcctt caaacgcgcc gacaatcgga tgtccgacga
      661 tatacaaatc gccgatggcg tcgaggattt tgtggcgcac aaactcatcg ggatagcgca
      721 agccttcagg attcaggaca tccgtgtcgc caatcacgat ggcgttgttc aaattgccgc
      781 ctaagccgag attgtgggcg cgcatcattt ccacttcgtg cataaagccg aaagtgcgcg
      841 cgcgcgcgat ttcgccgatg taggatttgc cggcgaaatc aatttcaaac gtaggcgggc
      901 tgcggttgaa aacaggatgg tcgaattcga tggtcagcgt taccttaaaa ccgtcatacg
      961 gcgtaaatcg gacccatttg cccgcttctt tgatttcgac gggtttgagg attttcaaaa
     1021 aacgcttttg cgccttttgg tctacaacgc ccgcatcttg caggaggtaa ataaacggca
     1081 ggctggagcc gtccataatc gggatttcgg gcgcgttcaa ctcaatcagc gcattgtcga
     1141 tgccgtaggc ggacagtgcg gacatgatgt gttcgatggt gccgacgcgc aggcctttgt
     1201 cggtaacgat ggtggatgaa aggcgggtat cgttgatcaa ataagggttc agcttgattt
     1261 gttcgcccat ctcgccgtcc aaatcggtgc ggcggaagga aatcccgctg ttttcaggcg
     1321 cggggtgcag ggtcagcgcg acgcgttcgc ccgaatgcag cccgactccg gtaacgccga
     1381 tggatttcgc caaagttctt tgcagcataa accgcttcct tatcaatggg gtaagtttcg
     1441 gaataatacg ataaaaccgg aaaaacaggc tatgtttttc aatagtattt gccaatgtat
     1501 ccgtttccaa cacgtaagcc gcatgaaaat gtatggcgga ttaacgaaaa tcaggacaag
     1561 gcggcgaagc cgcagacagt acggcaaggc gaggcaacgc cgtactggtt taaatttaat
     1621 tcactataca tcccgtcatt cccgcgcggg cgggaatcca ggacgtaaaa tctcaagaaa
     1681 ccttttttcc cgataagttt ccgcaccgac cggcctagat tcccgcgcgg gcgggagtcc
     1741 ggaccgcttg ttcggcaaat gggggggcgg gttgcgcgcc tgtcagataa aaaccgtgtt
     1801 taaacgggtg gcaatgaggc acatgcaggg ccttgaagcg caatcgatat attatttcca
     1861 tcaaaacgga cgaccccgcc cgccttgcaa acccttaaaa gacaagccgc ccgggttgat
     1921 ccgggcggcc gtggatcacg taccggcaga tgacgtatca cggcaggttg acggcaggtg
     1981 cttggtttcg attttggtgc cgttggcgcc gtcggtgccg tcggcggtga cggcgtcgtc
     2041 gtctttggcg gcgcgcgtaa ccggctgtcc gcagaaccat tttaccgaac cgttttcacg
     2101 cttggcccac agggagagtc ttttgtcttt gatttctttg tttacgttgc ttgaattcat
     2161 tgtggcggtg acgacgccgt tttcgacttt aacttcctta acatatttgc ctttgattga
     2221 tgaagaagat gccacgccgg ccttgtcgtt gtcttccggc catatgccgt gattcaggta
     2281 atactcggtg acggctgatt tttgaccttc ggccaaaagg atggcttcgt cattcccgcg
     2341 caggcgggaa tccgggtctg tcggcacgga aacttatcgg gtaaaacggt ttctttagat
     2401 tttgcgttcc ggattcccac tttcgtggga atgacgggat gtaggttcgt gggaatgacg
     2461 gtttaggtat ttttatagaa agccgtaggt ggtgtttcta tgcaaacggc agatgctgcg
     2521 tcgcggcagg ttgacggcag gtgcttggtg tcgatgttgg tggtgtcttt gccggcggcg
     2581 tcggcgtcgg cgtcggcttt ggcgcgcgta accggctgtc cgcagaacca ttttaccgaa
     2641 ccgttttcac gcctgcccca cagggagagt cttttgcctt ggatttcttt gtttacgccg
     2701 cttgaattca ttgtggcggt gacgacgccg ttttcgactt taacttcctt aacatatttg
     2761 cctttgattg atgaagaaga tgccacgccg gcagaagtgt tgtctttcgg ccatatgccg
     2821 tgattcaggt aatactcggt aacggctgat ttttgacctt cggccaaaag gatggcttcg
     2881 tcattcccgc gcaggcggga atccagcccc gtcggtacgg aaacttatcg gat
//
LOCUS       DAWXHA010000153         2866 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.153, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000153 DAWXHA010000000
VERSION     DAWXHA010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.153"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            461..1258
                     /gene="truA"
                     /locus_tag="AABD07_001983"
     CDS             461..1258
                     /gene="truA"
                     /locus_tag="AABD07_001983"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HFB2356444.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQAGGVPTVQAALETALARI
                     AGESVATTVAGRTDTGVHAAAQVVHFDITAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PGFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAALLIGEQDFS
                     SFRAAGCQAKSPVKTIYRTDLTQSAGLIRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPGAYGIVRPQIPEWL"
     gene            1775..2821
                     /locus_tag="AABD07_001984"
     CDS             1775..2821
                     /locus_tag="AABD07_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HFB2356445.1"
                     /translation="MKKSLIALTLAALPVAATADVTLYGTIKAGVQTYRSVEHTKGKV
                     SKVETGSEIADFGSKIGFKGQEDLGNGLKAVWQLEQGASVAGTNTGWGNKQSFVGLKG
                     GFGTIRAGSLNSPLKNTKDNVNAWESGKFTGDVLEISGMAKREHRYLSVRYDSPEFAG
                     FSGSVQYAPKDNSGSNGESYHVGLNYRNGGFFAQYAGLFQRYGEGTKKIEYDNQFYSV
                     PSLFVEKLQVHRLVGGYDNNALYASVAAQQQDAKLYGTWRANSHNSQTEVAATAAYRF
                     GNLTPRVSYAHGFKGSVHSADYDNTYDQVVVGAEYDFSKRTSALVSAGWLQAGKGADK
                     IVSTASAVVLRHKF"
BASE COUNT          733 a          875 c          687 g          571 t
ORIGIN      
        1 tgtctgcctt gggcgggcgc gggtggcggc cgggcggttt gtcgctatga tacggaagtt
       61 ccgatataca agggcgggct tcagcccgcc aaatccacca actccgccga atccaccgat
      121 tcccgccgcc gtcattcccg cataagcggg aatccagacc cgtcggcacg ggaacctgca
      181 tcccgtcatt cccacaaaag tgggaatccg gaacgaaaaa tctcaagaaa ccgttttacc
      241 cgataagttt ccgcactgac agacctagat tcccgcctgc gcgggaatga cggttcgggc
      301 actcctgaca gggtgaattc acaggatagc gattcgtagc aactgcatcc aaccccccga
      361 acaactcccc aaacaacgcc gcgcgccccg ggcgtttgcc gtttccctgc aaaatctgcg
      421 atacaatgca gtctgaacat ttatccgaat cccaaacccg atggataccg cacaaaaaca
      481 acgctgggca ataaccctat cctacgacgg cagccgcttt tacggctggc agaaacaggc
      541 gggcggcgta ccgaccgttc aggcggcatt ggaaaccgca ctcgcccgaa tcgcaggaga
      601 atctgtcgcc accacagttg ccggcaggac cgacaccggc gtgcacgctg ccgcccaagt
      661 cgtccacttt gacataactg ccgcccgtcc ccaacaggca tgggtgcgcg gcgtaaatgc
      721 ccacctgccc gaaggcattg ccgttttgca cgcccgacag gtcgcacccg gatttcacgc
      781 ccgcttcgac gcatacggac ggcactaccg ctacctgctc gaatccgccc ccgtccgttc
      841 ccccctgctc aaaaacaggg caggctggac acacctcaaa ctcgacatcg aaccgatgcg
      901 ccgggctgcc gccttattga tcggcgaaca agacttctcc agcttccgcg ccgccgggtg
      961 ccaggcaaaa tcccccgtca aaaccatcta ccgcaccgac cttacccaaa gcgcaggact
     1021 gatccgcctc gatttgcacg gcaacgcctt tttgcaccat atggtacgca acatcatggg
     1081 cgcgctcgtt tatgtcggca gcggcaggct cagcgtcgaa ggcttcgccg cactgattca
     1141 agaacgcagc cgcctcaaag ccccaccgac cttcatgccc gacgggcttt acctgaccgg
     1201 cgtcgactat cccggggcat acggcatcgt ccgcccccaa atccccgaat ggctttaaaa
     1261 cattcttgtc gcggagattt tgaaatcgga caaactgtca ggcaatcttt ttcaatgttg
     1321 acactatagt ggattaacaa aaatcaggac aaggcggcgg gccgcagaca gtacaaatgg
     1381 tacggaaccg gttcgcccgg tgcttgggcg ccttagggaa ccgttccctt tgggccgggg
     1441 cggggcaacg ccgtaccggt ttttgttaat ccgctataac ccccggtttg caatgccctc
     1501 caataccctc ccgagtaagt gttgtaaaaa tgcaaatctt aaaaatttta aataaccata
     1561 tgttacaaaa caaaaaatac ccgtaatatc tctatccgtc cttcaaaatg cacatcggat
     1621 tccacacaaa aacaggcaga agtttgtttt ttcagacagg aacatctata gtttcagaca
     1681 tgtaaccgcc gagcccctcg gcggtaaatg caaagctaag cggcttggaa agcccggcct
     1741 gcttaaattt cttaaccaaa aaaggaatac agcaatgaaa aaatccctga ttgccctgac
     1801 tttggcagcc cttcctgttg cggcaacggc cgatgtcacc ctgtacggca ccatcaaagc
     1861 cggcgtacaa acttaccgtt ctgtagaaca tacaaaaggc aaggtaagta aagtggaaac
     1921 cggcagcgaa atcgccgact tcggttcaaa aatcggcttc aaaggccaag aagacctcgg
     1981 caacggcctg aaggccgttt ggcagttgga acaaggtgcc tccgtcgccg gcactaacac
     2041 cggctggggc aacaaacaat ccttcgtcgg cttgaagggc ggcttcggta ccatccgcgc
     2101 cggtagcctg aacagccccc tgaaaaacac caaggacaac gtcaatgctt gggaatccgg
     2161 caaatttacc ggcgatgtgc tggaaatcag cggaatggcc aaacgggaac accgctacct
     2221 gtccgtacgc tacgattctc ccgaatttgc cggcttcagc ggcagcgtac aatacgcacc
     2281 taaagataat tcaggctcaa acggcgaatc ttaccacgtt ggcttgaact accgaaacgg
     2341 cggcttcttc gcacaatacg ccggcttgtt ccaaagatac ggcgaaggca ctaaaaaaat
     2401 cgaatacgat aatcaatttt atagtgtccc cagcctgttt gttgaaaaac tgcaagttca
     2461 ccgtttggtc ggcggttacg acaataatgc cctgtacgcc tccgtagccg cacaacaaca
     2521 agatgccaaa ttgtatggaa catggcgtgc taattcgcac aactctcaaa ccgaagttgc
     2581 tgctaccgcg gcataccgtt tcggcaactt aacgccccgc gtttcttacg cccacggctt
     2641 caaaggctct gttcatagtg cagactacga caatacttat gaccaagtgg ttgtcggtgc
     2701 ggaatacgac ttctccaaac gcacttctgc cttggtttct gccggctggt tgcaagcagg
     2761 caaaggcgca gacaaaatcg tatcgactgc cagcgccgtc gttctgcgcc acaaattcta
     2821 atctgcaaag attggtatca acaaaaagcc tgtcgtcaga caggct
//
LOCUS       DAWXHA010000154         2799 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.154, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000154 DAWXHA010000000
VERSION     DAWXHA010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.154"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            70..351
                     /locus_tag="AABD07_001985"
     CDS             70..351
                     /locus_tag="AABD07_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HFB2356446.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIVELAKSLSLSAT
                     AVSCHLNRLRAGGLVDFTRYHRIIEYRLVSEDAATILRTIRDLENKRAA"
     gene            411..1181
                     /gene="xth"
                     /locus_tag="AABD07_001986"
     CDS             411..1181
                     /gene="xth"
                     /locus_tag="AABD07_001986"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFB2356447.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPE
                     KWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVTSEMAAVLKDVRIDLETRALERPSDHAPVAAEFDL"
     gene            complement(1455..2132)
                     /locus_tag="AABD07_001987"
     CDS             complement(1455..2132)
                     /locus_tag="AABD07_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HFB2356448.1"
                     /translation="MTFFKPFTVVLTASALALSGCVADPVTGQQSPNKSAMYGLGGAA
                     VCGIVGALTHSGKGARNSALACGAIGAGVGGYMDYQEQRLRQNLAGTQIEIQRQGNQI
                     RLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGSDAVNNPL
                     SQHRAQAVAYYLQTRGVAASRLTVYGYGSHMPVASNATVEGRAQNRRVEILINPDQRA
                     VNAARHM"
     gene            complement(2242..2467)
                     /locus_tag="AABD07_001988"
                     /pseudo
     CDS             complement(2242..2467)
                     /locus_tag="AABD07_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749744.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
     gene            complement(2615..2799)
                     /locus_tag="AABD07_001989"
                     /pseudo
     CDS             complement(2615..2799)
                     /locus_tag="AABD07_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749744.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
BASE COUNT          614 a          750 c          814 g          621 t
ORIGIN      
        1 taatcaaaat catccatatc tgccgcccgt caatccgctt ggcgggcgga aaaggtttta
       61 ggaataccga tgaacacaat accgctccac accatactca aacttatggc gcatcccgaa
      121 cgtatggcga tactgatcca actgttggac agcgaacgca atatcgtcga actggcaaaa
      181 tccttatccc tgtcggctac cgcggtttcc tgtcatttga accgcctgag ggcgggcggt
      241 ctggtggact ttacgcgtta ccaccgcatt atcgaatacc gcctggtttc cgaagacgcg
      301 gcaacgattc tgcggacaat ccgcgatttg gaaaacaaac gcgcggcata gtgttagaat
      361 ccttttcttt tgccgtctga acgtttcaga cggcattttt cggaaatgtt atgaaaatca
      421 ccacttggaa cgtcaattcg ctcaatgtgc ggctgccgca ggtgcaaaac ctgcttgccg
      481 acaatccgcc cgatattttg gttttgcagg aactcaaact cgatcaggac aaatttccgg
      541 ccgccgcctt gcagatgatg ggctggcact gtgtttggag cgggcagaaa acctacaacg
      601 gtgtggcaat cgtcagccgc agcgtgccgc aggacgtgca tttcggtttg ccttccctgc
      661 cggatgaccc gcaacgccgc gtgattgcgg cgaccgtagg cggcgtgcgc gtcatcaatg
      721 tctattgcgt caacggcgag gctttggaca gccccaaatt caaatataag gaacagtggt
      781 ttgccgcact gacggagttt gtccgcgacg aaatgacccg ccacggcaaa ctggtactgc
      841 tgggcgattt caatattgcg cctgccgatg cggactgtta cgaccctgaa aaatggtatg
      901 aaaaaatcca ctgttcgtcc gtcgaacggc agtggtttca aaatctgctg gatttgggat
      961 tgaccgacag cctgcgccaa gtccaccccg aaggcgcgtt ctatacctgg ttcgactatc
     1021 gcggcgcgat gttccaacgc aaactgggcc tgcgtatcga ccatatattg gttacatccg
     1081 aaatggcggc cgttttgaag gatgtccgca tcgatttgga gacgcgcgcg ctggagcgtc
     1141 cgagcgacca cgcgcccgtg gcggcagaat ttgatttgta attcgggaaa ggcaaatgcc
     1201 gtctgaaact tcgcagggtt tcagacggca ttttgattga atatctgttt aaacgatgag
     1261 gttacagggg tatcgcggta tggcggtaac gtctgcaagg ttgggcccac ttgcacgcca
     1321 ccggctgcaa tctgcggttt cccggcaaac ggcgagacgt tatccatagc attacagtcg
     1381 gggtacggct gtgcttgcga atacggaaat gccgtctgaa aaacattcag acggcattgg
     1441 cgttgcaggg cgcgttacat gtgccgtgcg gcgttgacgg cgcgttggtc ggggttgatg
     1501 aggatttcga cgcggcggtt ttgcgcgcgg ccttcaaccg tagcgttgga cgcgaccggc
     1561 atatgcgaac cgtagccgta aaccgtcagg cgcgaagccg ccacgccgcg cgtctgcaga
     1621 tagtaggcaa ccgcttgggc gcggtgttgc gaaagcggat tgttgactgc atcggaacct
     1681 gtgttgtcgg tgtgcccgtt gatggtcagc gtcgtgtcgg gatactgcac cagcgtctgt
     1741 gcggcagtgt tcagggcgta ttgcgcactg ccgcccaacg ccgcgctgcc ggtggcgaag
     1801 gtaacgcttt cgggcatcac cagcctgatt tggttgcctt ggcgttggat ttcgatttgc
     1861 gtgccggcaa ggttttggcg caaacgctgc tcttggtagt ccatatagcc gcccacgcct
     1921 gcgccgattg cgccgcaggc aagcgcggaa ttgcgtgcgc ctttgccgct gtgggtcagt
     1981 gcgccgacga tgccgcacac tgccgcgcca cccaaaccgt acatggcgga tttgtttggg
     2041 gactgctgtc cggttacggg gtcggcaacg cagccggaaa gcgcgagtgc ggatgcggtc
     2101 agcacgacgg taaagggttt gaagaaagtc atggcgtttc cttccgtgca tatgtcaaac
     2161 cgtacaacta taagcaatca tgccgtctga aaaagtgcaa ttaacctgaa attacccgat
     2221 ttttcccgaa acaacgcggg tttatcgtga tttgcgccga aaccgcagcc acatccgcaa
     2281 aaaaacgtac cttcacatcg tagccgaccg agcctgcacc cggtatcggc aataatgccg
     2341 aaacgggcag ggagaaatgg tgtccgattt tatggcagcc ccacgcgccg acgatgccgc
     2401 cgagcagcca tattttcggt ttgtcgacgt gtacgtgcgg caggcgcgga tggtgggttt
     2461 aggaatatag tggattaaca aaaatcagga caaggcggcg aagccgcaga cagtacagat
     2521 agtacggaac cgattcactt ggtgcttcag caccttagag aatcgttctc tttgagctaa
     2581 ggcgggccaa cgccgtactg gtttttgtta atccactata gtacggcacg cgcgggattt
     2641 cgatgcccaa gtcggctgcc gtgccgggcc atgtgcgtcg aacagattgc accgcccggc
     2701 agaagcgtca tccccgtgtt gtgcatacct atgatgaaac agagcagaaa cagtgcgagc
     2761 gaagggaaaa ccgccccgct gccgccgatg tcccattgc
//
LOCUS       DAWXHA010000155         2780 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.155, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000155 DAWXHA010000000
VERSION     DAWXHA010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2780
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.155"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            2..1922
                     /locus_tag="AABD07_001990"
                     /pseudo
     CDS             2..1922
                     /locus_tag="AABD07_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712496.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            1979..>2780
                     /locus_tag="AABD07_001991"
     CDS             1979..>2780
                     /locus_tag="AABD07_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HFB2356449.1"
                     /translation="MDMKRRDFLKMTAALAAAGVSPSLLAAGKEQFTVYGAPAMPSVT
                     IAVAALQGKLAKQADVSLKIWRSPDQLRAGVASGQFKVMMSPSNVGVNLRNQGQKVGM
                     VNILTKGITQLVCKGSAIASPQDLVGKKILVPFKNDMPDIVLQALLKKLKIDAHKVSI
                     TYAATPPEAVGLFPSKGYHAVILPEPMATASLLKGKTIGINVVHGFDLVKAWGQAFGT
                     KPLIPMAGIIANEEYFHAHKAQFDIFHQDLKNALNWILANRQNAAKIGK"
BASE COUNT          786 a          813 c          656 g          525 t
ORIGIN      
        1 aatgaaacta aatactctca catgggcttt gatgaccgtt ttttccgttg cgccatcttg
       61 ggcagaacaa ccggcaaata ctgaagaaat acaacccgtc aaaaccttct ccccgcccaa
      121 accgattgca ccgaccgccg cacaaggcta tttccccgaa aaccaattcg accgctccga
      181 ccgcagcgat tattactttg ttaccgaaaa catagaccaa gccttccgtc cgctgaaggc
      241 aaacagcagt ttttacggca aaagctttta caactccgtt accgcgcaag cactcggggc
      301 gaaggtatac ggcgtagcca acctcaatcg caccaaggca aacggctaca aagatggcgg
      361 tgggcgcgac accgattgga aatacagccg cttcaatcag gctttggtac tcggtttcgt
      421 gccgtctgaa aatcaagaat accgcctcac ttatctgcac gacgacatca acaacgaccg
      481 ccagccgcag gtcgtcaacg acgcattgga caccgaacgc cacatctcca aactcaacgt
      541 gcgttggggc aatgccgatt tgagcaatac ggtcagcgcg gaagcaggcg tcatcaaact
      601 caaacgccat gccgacaatt actccttgcg accaaacaac acgccgcagc aagtgttcgt
      661 agaacttgac cgcaaagtgt atgatttctc gctcaaacac gatgcggatt tcggcaaatt
      721 ccacaacacg gcagccgtca gctaccgcaa cgacagccaa aacggcgaac gcaacaccca
      781 cactgccatg tgcgatttcc tcaacggcta ccgtttcgcc gatgtgcaca tcgaccgctg
      841 gtgcattgcc gataccttat cttacaagtt tgacgaccga cacaaactgg gcttgggctt
      901 aagctacgaa ctcaacgaag cggacattcg caaaaatacg gcacagcctg aaaacccaat
      961 aaaacccggt ttccccttcg cctcatcaca acaaatctgg aaaacccatt acggctacga
     1021 cttcaacggc aaagtgcgcc gtcatgcttt gtcgggcgaa ctcaaatacg atttcacgcc
     1081 gtctgaaacg caaaaataca gcgtttccct cgcgcatttg gaacgcatcg gcgacaacac
     1141 cgaacgcttc aactcgcttg ctgccatcgt gcaaaaccgt atgagcggca tgctgatgaa
     1201 ccaaaatcca gccgccgcca ttgcaggcaa tccccctgct gaaaactgaa aaacacaacc
     1261 gcatcaggct caccgccgac agccgcaacg actactacaa cggctacatg aactcgctcg
     1321 caggcgcggg ctggaacgtg ggcggcacgc ttgtggcgga caaagtcaaa gacctgatta
     1381 tttttgaccg cgcacacgga caaagcggca cagcttccaa agacggcggc atcatcacac
     1441 gcaacgtgga cgcacgattg tttaccgcgc aggcctacgc gcgttacaac ttcaatccgc
     1501 attgggcggc aggcatcaaa gccgcctaca actacggaca caacgaaacc gacggcaggc
     1561 cgccctatca aatccgtccg tttgaagccg ccgtccaagc cgactacaaa aactactttg
     1621 cccacggcag ctacaacatc ggcgcggcaa cacgctttgt cgccaaacaa acgcgcggtg
     1681 attttgatat ggcaagcggt ctgggcatag acaaacgcga agccgccaaa ggctttaccg
     1741 ttgccgacgt gtacgcaggc gtaaacatca aagacaaata cggcttgcgc ttgggcgtga
     1801 acaacgtatt caacaaaaaa tacgtcgaat acatcagcgg cgaccacgtc ctcgccctat
     1861 cccccagcgt agtgtatgca ccgggcagga catattggtt gagtttgcat gcggcatttt
     1921 aaaaccatgc cgtctgaaaa atacctgcat tggcttatta agaattagga gataaaaaat
     1981 ggatatgaaa agacgcgatt tcttaaaaat gaccgccgcg ctggcagccg caggcgtttc
     2041 gccttctctg cttgctgccg gtaaagagca atttaccgtg tacggcgcac cggcaatgcc
     2101 cagcgttacc attgccgtag cggcgttgca aggtaaactg gcgaaacagg cggacgtgtc
     2161 gctgaaaatc tggcgttcgc ccgaccaact gcgcgcgggc gtggcaagcg ggcaatttaa
     2221 agtgatgatg agtccgagca atgtcggcgt aaacctgcgc aaccaagggc agaaagtcgg
     2281 catggtgaat attttgacca aaggcatcac gcagttggtc tgcaaaggca gcgcgattgc
     2341 ctcgccgcag gatttggtcg gcaaaaaaat cctcgtgccg tttaaaaacg atatgcccga
     2401 catcgtgctg caagccttgt tgaaaaaact gaaaatcgac gcacacaaag tcagcattac
     2461 ctacgctgcc acaccgcccg aagcagtcgg actatttcca agtaaaggtt accatgccgt
     2521 catcctgccc gaaccgatgg caaccgccag cctactgaaa ggcaaaacca taggtataaa
     2581 cgtcgtgcac ggttttgatt tggtaaaagc atgggggcag gcgtttggca ccaaaccgct
     2641 gattccgatg gcaggtatca tcgccaacga agaatatttc cacgcacaca aggcgcagtt
     2701 cgacatcttc catcaagatt tgaaaaacgc gctcaactgg atattggcca accgccaaaa
     2761 cgcggcgaaa atcggcaaaa
//
LOCUS       DAWXHA010000156         2654 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.156, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000156 DAWXHA010000000
VERSION     DAWXHA010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.156"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            189..1187
                     /locus_tag="AABD07_001992"
     CDS             189..1187
                     /locus_tag="AABD07_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356450.1"
                     /translation="MMKPSESLRAAGRPIAYYPKLAKPLGGVNAAILFGHFFYWNDKT
                     QYESGIYRTAEEIEIETGLSVQEQRTARAKLRERGVLIETEKRIEHRIYYKLNLDAFD
                     DLMLQHSGGGESTAPKCNINSPELQNQHSGSEESTAVIRTEDLTEDLAVYTPLPPNAG
                     NGKGGLNADAFVSADAETCGRETGEPTSPKAESDSNGNGGLSGKPKNANVPRRRKTHG
                     VPLQEIADLYNEVLGGRLPSVQVLNDTRKRAIANRWCEMLGTAAPNGKVRFGDKETGL
                     AWFAGFFRKVAMNPFWMGENQTGFAVGFDWIFKAGNFVKILEWHPPKTNQAARGRA"
     gene            1184..2545
                     /locus_tag="AABD07_001993"
     CDS             1184..2545
                     /locus_tag="AABD07_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HFB2356451.1"
                     /translation="MNRIEETEAVQSLASVGAEQNILGGILIEPTAIARCAILTPEKF
                     YQAQHRIIFRALLDMAAANEPIDIITLNDKLEARGEAENAGGLAYLIDLNQNTPSAKN
                     ISRYVGIVNDRFVERGLLKASAAIEKIAVSKDGGTVAEKLSKAADELAAAGKDAVKRE
                     TKTFGQTVEDLIGGLDKRLDGVRFGLPTGLMKLDGMTGGLPDGNLIVIAARPSMGKTV
                     LAENIARFALKQGKAVHFQSYEMSAVELARRGMAAECNIPMQNLKTGNLTQSDYANMP
                     IYVSQAKEWKFDVNCDLLNVDELCFLAKEKKLTTGLDLLVVDHLHIMPRAGRDEVAEL
                     GNISRRLKNLAAELNIPVVLVAQLNRGNTKQADKRPNMADIRGSGAIEQDANIIIMPH
                     RESYYDGNENPSIAELIIAKNRDGETGTVVCGWKGQFMKFEEEPDLAWQAPKHDEYDP
                     YSV"
BASE COUNT          722 a          621 c          809 g          502 t
ORIGIN      
        1 aatacaaggt cggtaactgt aaaaatcccg ttgcccatta ctcaatcgca aagtcaggaa
       61 ttgaaccatg agccgggaac aaagaatacg cggagcccgc ttgccggtgt cggcttatat
      121 gcaggcggaa ggcgcgggca aggcacggga agcgttggac gggcgggtcg aaaaagtgaa
      181 aggggttgat gatgaagccg tctgaaagtt tgagagcggc aggcaggcca atcgcgtatt
      241 acccgaaatt ggcaaagcct ttgggcggtg taaatgcggc aatattattc gggcatttct
      301 tctactggaa cgataagacg cagtatgaat caggcattta ccgaacagcg gaagaaattg
      361 aaattgaaac cgggctgtcc gttcaggaac aaagaacggc acgggcaaag ctgagggaac
      421 gcggcgtatt gattgagact gaaaaacgaa ttgaacaccg catttactac aaactgaatt
      481 tagacgcttt tgatgatttg atgttgcaac attcgggggg tggggaatca acagccccga
      541 aatgcaatat caacagcccc gaacttcaaa atcaacattc ggggagtgag gaatcaacag
      601 ccgttataag aacagaagat ttaacagaag atttagcagt atataccccc ttacccccaa
      661 acgccggaaa cggcaaaggc ggtttgaacg ctgacgcgtt tgtttccgct gacgcggaaa
      721 cgtgcgggcg ggaaaccggc gaaccgactt cgccgaaggc cgaaagcgac agtaacggca
      781 acggcggcct ttcgggaaaa ccgaaaaatg cgaatgttcc gcgccgccgc aaaacccacg
      841 gcgtaccgct tcaggaaatc gccgatttgt acaacgaagt tttgggcggc cggttgccaa
      901 gcgtccaagt gctgaacgac acgcgcaaac gggcgattgc aaaccgctgg tgcgagatgc
      961 tgggaacggc ggcgccaaac ggcaaggtga ggttcgggga caaggaaacc ggtttggcct
     1021 ggtttgccgg tttcttccgg aaagtggcga tgaacccgtt ttggatgggc gaaaaccaaa
     1081 cagggtttgc ggtcggcttc gattggattt tcaaggcggg caatttcgtc aaaatccttg
     1141 aatggcatcc gcctaaaacg aaccaggcgg caaggggaag ggcatgaacc gaatcgagga
     1201 aacggaagcc gtccaatcac tggccagcgt aggggcggaa cagaacattt tgggcggcat
     1261 cttgattgaa ccgacggcga ttgcgcggtg cgcaatcctg acccctgaaa agttttacca
     1321 ggcgcaacac aggattattt tccgcgctct gctggatatg gcggcggcaa acgagcctat
     1381 cgacatcatc acgctgaacg acaagctgga agcgcgcggc gaggcggaaa acgcgggtgg
     1441 cctggcttac ttgatagacc tgaaccaaaa caccccaagc gcgaagaata tcagccggta
     1501 cgttgggatt gtgaacgaca ggtttgtcga gcgcggcttg ctgaaggctt cggcggcgat
     1561 tgaaaaaatc gcggtttcca aagacggcgg gacggtcgca gaaaagctgt ctaaggcggc
     1621 cgacgaattg gcggcagccg gcaaagacgc ggtaaagcgt gaaaccaaga cattcggcca
     1681 gaccgttgag gatttgattg gcggtttgga caaaaggctt gacggcgtgc gtttcggatt
     1741 gcctaccggc ttgatgaagc ttgacgggat gaccggcggt ttgccggatg gaaacctgat
     1801 tgtgattgcg gcgcgtccgt ctatgggtaa aacggttttg gcggaaaaca ttgcgcgatt
     1861 cgcgctgaag cagggcaagg cagttcattt ccaaagctac gaaatgagcg cggtagagct
     1921 ggcaaggcgc ggcatggcgg ctgagtgcaa tatccccatg cagaacctga aaaccggcaa
     1981 tctgacgcaa agcgattacg ccaatatgcc gatttacgtc agccaagcga aagagtggaa
     2041 gtttgacgtg aactgcgacc tgctcaacgt tgacgagctt tgctttttgg ctaaggagaa
     2101 aaaactcact accggcttgg atttgttggt tgtcgatcac cttcacatca tgccaagggc
     2161 agggagggac gaggtggcgg agttggggaa tatatcgcgc cgtttgaaaa acttggcggc
     2221 agagctgaat atccccgtcg tcttggttgc ccagttgaac aggggaaaca caaaacaggc
     2281 agacaaacgc ccgaacatgg cagacattcg cggcagcggc gcgattgagc aagacgcaaa
     2341 catcatcatc atgccgcacc gcgaaagcta ctacgacgga aacgagaatc cgagcattgc
     2401 cgagctgatt atcgccaaga accgggacgg cgaaacggga acggtggttt gcggctggaa
     2461 agggcaattt atgaagttcg aggaagagcc tgatttggca tggcaagccc ccaaacatga
     2521 tgaatatgac ccttacagtg tctagtgcgg gaggccggta aatgcgtgaa acctgctttt
     2581 tctgcaaaca cgcggatttt aaaacccaac cggacacgcc ggtgcgcggt tttgcgaaat
     2641 gcgcgaaggc gcgg
//
LOCUS       DAWXHA010000157         2562 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.157, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000157 DAWXHA010000000
VERSION     DAWXHA010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.157"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(1..87)
                     /locus_tag="AABD07_001994"
                     /pseudo
     CDS             complement(1..87)
                     /locus_tag="AABD07_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type cleavage/methylation
                     domain-containing protein"
     gene            complement(336..1091)
                     /locus_tag="AABD07_001995"
     CDS             complement(336..1091)
                     /locus_tag="AABD07_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HFB2356452.1"
                     /translation="MKYVRLFFLGTALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNISWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKDRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASVGAS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCASR"
     gene            complement(1269..2447)
                     /gene="nirK"
                     /locus_tag="AABD07_001996"
     CDS             complement(1269..2447)
                     /gene="nirK"
                     /locus_tag="AABD07_001996"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
                     /protein_id="HFB2356453.1"
                     /translation="MKRQALAAMIASLFALAACGGEQAAQAPAETPAASAEAASSAAQ
                     ATAETPAGELPVIDAVTTHAPEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWT
                     FDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTST
                     FSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKG
                     KKGAQGLQPFDMDKAVAEQPEYVVFNGHVGAIAGDNALKAKAGETVRMYVGNGGPNLV
                     SSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFRA
                     FNKGALGQLKVEGAKNPEIMTQKLSDTAYAGSGAASAPAASAPAASAPAASASEKSVY
                     "
BASE COUNT          554 a          611 c          749 g          648 t
ORIGIN      
        1 ttccggccat ttgccgtgat tcaggtaata ctcggtaacg gctgattttt gaccttcggc
       61 caaaaggatg gcttcggaaa cttgcgcgca ggcgggaatc cggaccttag aacaacagca
      121 atattcaaag attatctgaa agtccgagat tccagattcc cgctttcgcg ggaatgacga
      181 aaagttgcgg gaatgacggt tcgggcattc cttaaattac ccgtgtatcg ctgtaaatct
      241 tagagatggc ggaatatagc ggattaacaa aaaccagtac ggcaaggcga ggcaacgccg
      301 tactggtttt tgttaatcca ctataattga aggggttatc ggcttgcgca gcggaagccc
      361 aagttgtgca ggacatattt ggattgcagg ctggtgcgga tgccgtagcg gaggaaggcg
      421 gcatagttgg acgagtcgct cgccccgaca gatgcgccgc tgcaaaacat ttgcgcgttg
      481 gcattgccgg aagaaagcag gctgctgttg aaatcttccg tccattccca aatcagcccg
      541 tgcatatcat aaacacccca gtagttcggg cggtctttgc cgacatcgtg caggcctttc
      601 cgtccgccgt cggcatacca atcgagaata gtgcggttgt agccgggttc gtttgagccg
      661 tttttctgcg tggcggaagc aagtccggca aattcccatt cgtcgatggt cggcaggcgt
      721 ttgccttgtg cggcgcaata ggcgttggcg gcaaaccagg aaatattggt aaccggctgt
      781 ttcaattcgc ccgccttcgg cgcatagctg cggctgccgt ttttcatcca atgcttcagg
      841 taagcgggtt ctgcctgttt ggaaccgatc ctgccttttt gccattgggg gtggctgttg
      901 acaaattcgg caaactcggc attggtaacg ggatatttat ccagtttgaa cggtttgact
      961 ttaatcaggc cggtatcttt tttcagataa agcgggcggt agctgccgcc ttcgatttga
     1021 accatttcgg cagccgccgc ttgagtgccg gcgagtgccg tgccgaggaa aaataaccgg
     1081 acgtacttca taaagcctcc tgacaggcgg ttagcattga tttttcagac ggcattttaa
     1141 acaaaaagcc gcgaatgccg tctgaaaaat caatcttccg aaaggaaaga ttggttgtta
     1201 aaaaaccact gccgtgcgta atgaagtacg gcggcagtgg tttgtcccgc taatgacggg
     1261 tatccgattt aataaacgct tttttcggat gcagaggctg ccggggcaga agcagccggt
     1321 gcggaagcag caggggcaga agccgcgccg ctgccggcgt aagcggtatc actcaatttt
     1381 tgagtcatga tttcagggtt tttcgcaccc tctactttca attgccccaa cgcgcctttg
     1441 ttgaatgcgc ggaagatgga gtggtcgacc aaagtgtagc tgcccgggat gtcgactttg
     1501 aattcgacga tggcagaacc gccggcaggc acgatggtgc tttgtacgtt ttcgttaatc
     1561 agtttgccgc cttcaacata aactttgtcg aagatttcgc cgatgacgtg gaaggaagac
     1621 accaagttcg ggccgccgtt accgacgtac atacgcacgg tttcgcctgc tttggctttc
     1681 agggcgttat cgccggcgat agcgcctacg tggccgttga atacgacgta ttcaggctgt
     1741 tcggcaacgg ctttgtccat atcgaacggt tgcaggcctt gcgcgccttt tttgcctttg
     1801 gtgtagaagt cgccttggac gatgtagaac tctttatcca ctttcggcag gccttcttta
     1861 ggctcgacca aaatcagacc gtacataccg ttggcgatgt gcataccgac cggcgcgacg
     1921 gcgcagtggt agatgtacag gcccggttgc agggctttga agctgaatgt ggaagtgcgg
     1981 cccggggcgg taaaggtcgc ggctgcaccg ccgccctgac cggttgcggc gtggaagtcg
     2041 acgttgtgcg gaacggtaga agaaggattg ttggagaatt cgacttcaac cgtatcgcct
     2101 tcgcgtacgc ggatcatacg gcccggaacg tcgccgtcaa atgtccagta gcggtattcc
     2161 accccgtcgt ccattttcat ggttttttcg acggtttcca tttttacgcg tactttggca
     2221 ggatagtcgc ggtcgattgc gggaggtact tcgggagcgt gggtggtcac cgcatcgatg
     2281 acgggcagtt cgcctgcagg cgtttcggcg gtagcttgtg cggcggaact tgcggcttct
     2341 gcggaagcgg caggggtttc ggcaggggct tgagcagctt gttcgccacc gcaggcggcc
     2401 aatgcgaata aggaagcaat cattgcggct aatgcttggc gtttcataat gttttccttt
     2461 tgtaagaaaa gtagggggga ttagttaaga acttggtgtg attatgcggt tgtcccattg
     2521 cgggcatttt aatttaagtc aaataattca taaaatatga ac
//
LOCUS       DAWXHA010000158         2558 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.158, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000158 DAWXHA010000000
VERSION     DAWXHA010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.158"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(129..2408)
                     /gene="nrdA"
                     /locus_tag="AABD07_001997"
     CDS             complement(129..2408)
                     /gene="nrdA"
                     /locus_tag="AABD07_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HFB2356454.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAAEGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYNHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKEVRLGYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVSGLYEAFFADQDEFERLYTKYEQDPNIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPDGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMDRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQAISANTAYDPGKFEGNKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
BASE COUNT          582 a          627 c          673 g          676 t
ORIGIN      
        1 catccatact tttccttttc tggaaaataa caacttagcc tcatatagta gtaggcacta
       61 atttaagaaa atccttgaag cctcctacta tctagaagcc ttggatatat ttcaaaaatt
      121 aacctgtttt aaatcttaca agccccacca gcgcagccgt catcttgaat atcggtctgc
      181 gtgtcgtccg cgccgtcgcg ggtgttgtgg tagtacaggg ttttgacgcc gtatttgtag
      241 gcagtcagca ggtctttgag catttgtttc atagaaactt tgttaccttc gaatttgccc
      301 gggtcataag cagtgttggc ggaaatcgcc tgatcgacga atttttgcat tacgccgaca
      361 agtttcaggt agccttcgtt gcccggaagc tgccacaggg tttcgtaggc atttttcaag
      421 gtttcaaact ccggcacgac ttgtttcaaa atgccgtctt tcgatgcttt gaccgttacc
      481 aatccgcgcg gcggctcgat gccgttggtg gcgttggcga tttgcgagct ggtttcagac
      541 ggcatgagcg cggtcagagt agagttgcgc aggccgtatt tgacgatgtc ggcacgcagg
      601 ctttcccagt cgtaatgcaa aggctcgccg cagacggcat ccaaatcttt tttgtaggtg
      661 tcgatgggca gtttgccttg cgaataaacg gtttggttaa agagcgtgca cgctccgtat
      721 tctttggcaa ggtttgccga tgctttgagc aggtaatact gtatggcttc aaaggtacgg
      781 tgggtcagac cgagcgcgga accgtcgctg tagcggacac cgtttttcgc cagatagtag
      841 gcgtagttga tgacaccgat gccgagcgaa cgccggtcca tagtagaggt acgcgcggct
      901 tctaccggat atccctgata atctaaaagt gcatcgagtg cgcgcacggt caaatcggca
      961 agcccttcca attcgtccaa gctgtttaat gcacccaagt tgaaggcgga cagtgtacac
     1021 agggctattt cgccgtcagg gtcgttgatg ttgtccagcg gtttggtcgg cagggcgatt
     1081 tccatacaca agttggactg atgaacaggc gcaacgcgcg gatcgaacgg gctgtgcgta
     1141 ttgcagtgat cgacgttttg aatgtagatg cgcccggtcc cggcacgctc ctgcatcagc
     1201 gtggaaaaca ggtcggcagc cggaatgata cgcttgcgta tgttcgggtc ttgctcgtat
     1261 ttcgtataga gccgctcaaa ttcgtcttgg tcggcaaaaa acgcttcgta caaccccgaa
     1321 acctcgttgg gcgaaaacag cgtaatgttg ccgcccttaa tcaggcgggt gtacagcagg
     1381 cggttgattt gcacgccata atcaagctgg cggatacggt tgtcttccac gccccggttg
     1441 tttttcaaca ccagcaggct ttcggcttca atatgccaca aggggtagaa caaggttgcc
     1501 gcgccgccgc gcacgccacc ttgcgaacaa gatttgaccg ccgcctgaaa catcttaaag
     1561 aagggaatgc agccggtatg ccgggcttca ccgccccgga tttcgctgtc cagcccgcgg
     1621 atacgtccgg cattgatgcc gatgcccgcg cgttgggaaa cgtatttcac aatcgcgctg
     1681 gtagtggcat tgatggaatc caaactatcg tcgcattcaa tcagcacaca gcttgagaac
     1741 tggcgcgtag gcgtacgcac gccgctcata atcggcgtgg gcaacgatac tttgaatgtg
     1801 gaaacggcat cgtaaaaccg tttgacgtaa cccaagcgca cctctttcgg gtatttgctg
     1861 aaaaggcaca tcgccaccaa aacatataaa aactgcggcg tttcgtaaat ctggcgggta
     1921 acgcggttct gtaccagata tttgccttcg agctgtttga cggcggcata ggaaaaggac
     1981 atatcgcgtt cgtggtcgat ataggcgttc agttcgtcaa attcttcgcg gctgtaatcc
     2041 tcaaggatat gcctgtcgta ttttccggca tcggtgagct ttttaacatg gttgtaaagg
     2101 tgcggcggct cgtattcgcc gtaggctatt ttacgaagat ggaaaatcgc caaacgtgcg
     2161 gcaaggtatt ggtagtccgg ggtatcttcc gaaattaaat ctgcagcggc tttgatgatg
     2221 gtttcgtgga tgtcgtcggt gcggatgccg ttgtagaact ggatgtgcga tttcaactcg
     2281 acctgcgaca cggaaacatt ttccaatcct tccgccgccc aagtaacgac acggtgaatc
     2341 ttatccaaat caatggcttc caatcttccg tctcgtttgg ttacttttaa atcagtcggt
     2401 gtattcatcg cttcctcttc cactcttgat attcaagaca cggtcttttc aaataaatta
     2461 aggcagacaa tatagtggat ttttagcatt ttctccagtc ttgacaacga ttgcattttt
     2521 cagtttcagg caatgcgcga taaaacccgc ctgtcgta
//
LOCUS       DAWXHA010000159         2525 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.159, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000159 DAWXHA010000000
VERSION     DAWXHA010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.159"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..278)
                     /locus_tag="AABD07_001998"
     CDS             complement(<1..278)
                     /locus_tag="AABD07_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356455.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMVDWAYENIQSETVVEITENQI
                     IEYQNRGLWGLVSEITDNWLFGPSEGDWLIDKESILTVKEKLQNSDFST"
     gene            complement(275..1123)
                     /gene="mafB"
                     /locus_tag="AABD07_001999"
                     /pseudo
     CDS             complement(275..1123)
                     /gene="mafB"
                     /locus_tag="AABD07_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(1228..1443)
                     /locus_tag="AABD07_002000"
     CDS             complement(1228..1443)
                     /locus_tag="AABD07_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356456.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNPQLVQELEQHLIEAYNLMDTSN"
     gene            complement(1451..1654)
                     /locus_tag="AABD07_002001"
     CDS             complement(1451..1654)
                     /locus_tag="AABD07_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356457.1"
                     /translation="MLKRNLGFDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRD
                     PNSKDGGTAFRPTLGKTYFDKQK"
     gene            complement(1567..1926)
                     /locus_tag="AABD07_002002"
     CDS             complement(1567..1926)
                     /locus_tag="AABD07_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356458.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            complement(1923..>2525)
                     /locus_tag="AABD07_002003"
     CDS             complement(1923..>2525)
                     /locus_tag="AABD07_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448296.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFB2356459.1"
                     /translation="ITATAQTALAVAEAAGTVWGGKKVELNPAKWDWVKNTGYKTPAV
                     RTMHTLDGEMAGGNRPPKSITSKGKANAATYPKLVNQLNEQNLNNIAAQDSRLASAVK
                     DWKTIQPNKKGEINFGIGSATRQEAEQLGKIWVGDGAKPVSSPSCQGCMLSADGTRLY
                     RPPTTKSNTPESLNPTGVQANFVTRSVDGKTLTNGHLNIK"
BASE COUNT          695 a          524 c          423 g          883 t
ORIGIN      
        1 gtagaaaaat ctgaattttg taatttttct tttacagtca aaatactttc cttatctatt
       61 agccaatccc cctcacttgg tccaaataac caattatcgg taatttcaga aacaagcccc
      121 cataatccac gattttgata ttcaataatt tgattttccg taatttctac aactgtttca
      181 gattgaatgt tttcataagc ccaatcaacc atttcagtat attcactaat tgaaacattg
      241 tcttttaaac agaaaattaa caggttgtgt tcattcattt gtctaagttc ctgatatgag
      301 tttgttgttg taaataatct tttgcttgct taccttgtaa attaccggtt ttcacaacat
      361 taccatttga atcaagatac tgttttcgtg aattatcatg gattctaaaa tagttgtttt
      421 cgttatcttt tataattgta atttttccat ctaaactagt gtatcgagtt ttaactttat
      481 caggacttaa aataccaggt gcattgggag ttagtgtttt gtgcactgaa tcaaaacttg
      541 ctgaactcca gttgctacta aacttcttaa aactttgttt tcttttttca gcggcgctgt
      601 ttggtaaaga tttaataggt ttattcccac ctgccatttc cccgtcaaca gtctgcatag
      661 gtcgggcagc aggtttttca tagccggtat ttttaaccca atcccatttg gtcgggttaa
      721 gttctacttt tttaccgcgc caaaccgtac ctgcggcctc tgctacggca agggcagttt
      781 gggctgttgc tgttatattc ggatgggcat cagcccattg tctggcggaa ttaatgccgt
      841 cttttaccgc aaaagcactg tcctgtaata ggctcgcgac agcaagttgt gcttccggac
      901 ttaattttcc taaatcatta ataccttgta gagtctgctg agcggctgta tctgtgaccg
      961 ggcttaccgc actgtctgta attgccccaa tccctactcc ttgaaaaccc gttaaaaaag
     1021 gattaaccgc accttggatg atgccgcgaa tatcatccat acggttagcc caccaatttt
     1081 tatcggggtc gttttcccat atcagttttc ctgcttcatc agcacagtta ggattggcat
     1141 tgatgcccac ccagtttcag gcagcctgaa aaggattttt aagatacggc taggtgggct
     1201 gcgagaaccc acactctgca taaccattta gttagatgta tccattagat tatatgcttc
     1261 aattaaatgt tgttctagct cttgcactaa ttgaggattg cgaattcctg acacaatctc
     1321 aaattcttct gcatctatgc aaacacctgc ataaatttca ataacaaggg aacgcaataa
     1381 ttgaagctct tctcttgtta aagaaataat aatgtcatca cctgtgtaat tgattatatt
     1441 cataataatt ttatttttgc ttgtcaaagt aagttttacc taaggttggt ctaaatgcag
     1501 tcccaccatc ttttgaattt gggtctctaa ttacaattgc tccagactta tcatcccaaa
     1561 ttgctcttat gtgtttggat tgtaatcttc gaattcccaa gaaaaaaatc gtaataagtt
     1621 tgaaagtgtc aaatcccaag tttcttttga gcaatattct aatattttat caatttcact
     1681 tttaataatc ttatgatcaa actgttctaa tattaatgca ttagaccaaa aaaaaccttc
     1741 tttattacaa tgatgggaaa tccatttagg agaacaaatg caaagtgaaa aaatagatga
     1801 gccttgttct ccttcgattc cgatatccaa atctatccat ctatgaaaat tatctggaat
     1861 ttcgggggta aatttttcaa aatcaatatc atataaattt atgcttttta aatccaattt
     1921 aatcatttta tattcaaatg tccattagtt aaggtttttc catcaacact tctagtaaca
     1981 aaattagctt gcactcccgt tgggttaagt gattcagggg tgtttgattt tgtagttgga
     2041 ggacgatata gccttgtgcc atctgcactt aacatacatc cttgacaaga tggactacta
     2101 actggcttag ccccgtctcc aacccaaatt tttcctaact gttcagcctc ttgacgagtt
     2161 gcagaaccaa taccaaaatt aatttccccc tttttatttg gttgtattgt tttccaatct
     2221 tttacagcac ttgctaacct tgaatcttga gccgcaatgt tatttaagtt ttgctcattt
     2281 agctgattaa ccaacttagg ataggttgca gcattagctt ttcctttcga cgttatagat
     2341 ttaggcggtc tattcccacc ggccatctcc ccatccaaag tatgcatggt gcgaacagca
     2401 ggtgttttat agccggtatt tttaacccaa tcccatttgg ccgggttaag ttctactttt
     2461 ttaccgcccc aaaccgtacc tgcggcctct gctacggcaa gggcagtttg ggcagtagct
     2521 gtaat
//
LOCUS       DAWXHA010000160         2396 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.160, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000160 DAWXHA010000000
VERSION     DAWXHA010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.160"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(151..711)
                     /locus_tag="AABD07_002004"
     CDS             complement(151..711)
                     /locus_tag="AABD07_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356460.1"
                     /translation="MDIKTEEAYRLSFQHIQSHDVLAACRTVANYELSQPRPRGLFSG
                     ISAQEYWESYPCNEDAEILKSILLDSPEILDGISGGDMEMARIMAAFNFIWGLSHFPK
                     WLHRHEFASTPLDDSAVPAMLLFHAQSRQELKEYEEVELSCCPDGCEFCKSEDGKIYK
                     SSDAPVLPHAHCTHEQGCRCCYLPVI"
     gene            complement(711..1409)
                     /locus_tag="AABD07_002005"
     CDS             complement(711..1409)
                     /locus_tag="AABD07_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFB2356461.1"
                     /translation="MNRVDRIKNLIADRFNGNQAEFSRAINKAPAQINQWLNGYRNIG
                     DGVAAQIEIALGLPRGWVDGNDKPGIPVDSIKSNATVIGSVDAWDSKTPLSDDDCEVP
                     FYKDVCLSAGNGFSDEIEDYNGYKLRFSKSTLRRHGINPDDVVCVSADGDSMEPVFPD
                     GATLGINTADKMIKDGKIYAINHSGLLRTKILQKLPDNQVRIKSYNPEYKDETASLDS
                     LTVIGRVFWWSVLD"
     gene            1523..1753
                     /locus_tag="AABD07_002006"
     CDS             1523..1753
                     /locus_tag="AABD07_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HFB2356462.1"
                     /translation="MDLRDYCAIRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAAL
                     IEKSTNGRVTRKEMFPDTWHLIWPELADDQPK"
     gene            1856..>2396
                     /locus_tag="AABD07_002007"
     CDS             1856..>2396
                     /locus_tag="AABD07_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356463.1"
                     /translation="MKYIPNSFQIANAVVDDFLCRMSGNAWKCYAVIVRKTTGWQKEI
                     DYISVSQFKNLTGIKTDVTVADALKELVELNLIASVKRHGQVTGYRINMPEPSPENGG
                     TPPPENGGTATPKNWVHPKNGTTPKNWGVLPPENGGTTTPKNWGSTKHTTKPTNTKHS
                     ISASAAADAPLSAEPPESGK"
BASE COUNT          668 a          580 c          542 g          606 t
ORIGIN      
        1 tttttacgaa cataaaaaaa ttataaagtc aaggaagcac catgttgact tcctgaaatc
       61 accatgccga tttcctaaca ccggcgggca agcctacatg atgttcattt tttgggtatt
      121 aaaaaagccc gcatcgcgcg ggctgtgttt ttaaataaca ggcagatagc aacatcggca
      181 accctgctca tgcgtgcagt gtgcgtgtgg gagaacgggt gcgtctgatg atttgtatat
      241 cttgccgtcc tccgatttac aaaattcaca accatcgggg caacaagaca gctcgacttc
      301 ttcgtactct tttaattcct gacgcgattg tgcgtggaaa agcagcattg cagggacggc
      361 agaatcatca agaggcgttg atgcaaattc atgccggtga agccatttcg ggaaatgact
      421 caatccccaa ataaaattga atgcagccat gattcgcgcc atttccatat cgccgccgct
      481 gattccgtcc agtatttcag gggaatctaa aaggatagat ttcaagattt cagcgtcctc
      541 attgcacggg tagctctccc agtattcttg agcggatatg cccgaaaaca gcccgcgcgg
      601 tcttggctgc gataattcat aatttgcaac cgttctacac gccgccaata cgtcgtgtga
      661 ttgaatgtgt tgaaagctca atcgatatgc ttcttctgtt ttaatatcca ttagtctaat
      721 acactccacc aaaataccct gccaataacg gttaggctgt ctaaagaggc ggtttcgtct
      781 ttgtattccg ggttgtagct cttgatacgg acttgattat caggcagctt ttgcaagatt
      841 tttgtacgca acagcccact gtggttgatg gcatagattt tgccgtcttt aatcatttta
      901 tcggcagtat taatacccag tgtagccccg tcggggaata ccggctccat actgtctccg
      961 tcggcagata cgcagacaac atcgtcaggg tttatgccgt gccgtcttaa ggttgatttt
     1021 gagaaacgca gtttatagcc gttgtagtct tcaatttcat ctgaaaagcc gttacccgcc
     1081 gacaaacaaa cgtctttata aaatggaact tcgcaatcat cgtcggataa cggggttttg
     1141 ctatcccaag cgtcaacaga gccgataacg gtggcgtttg atttgatgga atcaacaggg
     1201 atacccggct tgtcgtttcc atccacccat ccgcgcggta atccaagcgc gatctcaatt
     1261 tgggcggcta cgccgtcccc tatatttctg tatccgttaa gccattgatt tatctgggca
     1321 ggagctttat taattgcccg agaaaactca gcttgattgc cgttaaacct gtcggctatc
     1381 agatttttaa ttctatctac tcggttcatt tcattacccc ttcaaatagg tataaatata
     1441 aagcatagct acatttatca atgctactat tttatattta gctatgctat actcacgcta
     1501 aattgatttg acagagatcg aaatggattt aagagattat tgcgcgatac gcggcaatca
     1561 gtctgatttg gcaagaaaaa caggaatttc cccgtctttt atccatcaga ttgccaaagg
     1621 attgaagccc gtcccaattc agtcggcggc gttgattgaa aagtcaacaa acggcagggt
     1681 aacacgaaaa gagatgtttc ctgatacctg gcatctaatc tggccggaat tggcagacga
     1741 ccaacccaaa taaaaagccc gtcggggatg acgggcagcc ggttacgcat tactcgattg
     1801 ttgaaaacgg ggtggaagtg tgggcgcaag accaatggga atggaaggac ggtaaatgaa
     1861 atatattcca aattcgtttc agatagcaaa cgcggtagtg gacgatttcc tctgccgaat
     1921 gagcggcaac gcgtggaaat gctacgccgt catcgtgcgc aaaacgaccg gctggcaaaa
     1981 ggaaattgac tacatctctg tttcccaatt taaaaacctg accggaatca aaacagacgt
     2041 aacagttgcc gacgcgctga aagagcttgt ggaattgaac ctgattgcct ccgtcaaacg
     2101 gcacggtcag gtaaccggct accgcatcaa tatgcccgaa ccgtcccccg aaaatggggg
     2161 tacaccaccc ccggaaaatg ggggtactgc cacccccaaa aattgggtac acccaaaaaa
     2221 tgggactacc cccaaaaatt ggggggtact acccccggaa aatgggggta ctaccacccc
     2281 caaaaattgg gggtctacaa aacacactac aaaacccact aatacaaaac acagtattag
     2341 cgcatccgca gcggcggacg cgcccctttc tgccgaacct cccgaaagcg gaaaac
//
LOCUS       DAWXHA010000161         2389 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.161, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000161 DAWXHA010000000
VERSION     DAWXHA010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.161"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..388)
                     /locus_tag="AABD07_002008"
     CDS             complement(<1..388)
                     /locus_tag="AABD07_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HFB2356464.1"
                     /translation="MRNAVGLDISKLTFDASAMVGNAEYSAKFDNDSKGLDQFSDRLK
                     SLGCQNLHICMEATGSYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAK
                     LIAQYCRSAKESELVKRQKPTDEQYRL"
     gene            complement(900..1259)
                     /locus_tag="AABD07_002009"
     CDS             complement(900..1259)
                     /locus_tag="AABD07_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356465.1"
                     /translation="MIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDG
                     RLARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGA
                     KEPPYDDRHVTSVKYFV"
     gene            complement(1380..>2389)
                     /locus_tag="AABD07_002010"
     CDS             complement(1380..>2389)
                     /locus_tag="AABD07_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356466.1"
                     /translation="GLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAP
                     LRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDI
                     FVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSA
                     SRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTE
                     QTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDC
                     TCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGK
                     P"
BASE COUNT          541 a          593 c          515 g          740 t
ORIGIN      
        1 aaagcctgta ttgctcgtcc gtaggcttct gcctctttac aagctcgctt tctttcgccg
       61 accggcaata ctgcgctatc agctttgcat cctgtttgtc tgttttggtg cgtttgaacc
      121 tgctttctgc atacttgctt attttcagcg ggttcactac gtaaacgctg taatactgcg
      181 cgaagtagtc ggcaacttct tcataataac tgccggttgc ctccatgcag atatgcagat
      241 tctgacatcc caagcttttc aaccggtccg aaaactgatc taaacctttt gaatcgttgt
      301 caaactttgc cgaatattcg gcattgccga ccatggcgga tgcgtcaaat gtcagtttcg
      361 atatatccaa tcctacggcg ttacgcatgg gattaccctt atatattcag aatctgtgtt
      421 ctttgatact actcaatttc acaaacaaga aaaccgcccg cctattctcg tcatcaaact
      481 ttaagtttgt ggtttgttca ggccggacgg tttcggcaaa gggttagcta ttcctttgcc
      541 gtgtcttatt ttattagggt tactggtttt ggtaaagatt cctgttgcga cccgaatgtc
      601 tgattttttt tgggcgtatc tcagtccgga atcactccgt tagtgggttt gcggtattga
      661 aaaacagttc ataaaaaagg aaaagggggg tattcgtaaa gattgggtaa cgcacccaat
      721 ctttacaaag cttccccctt ttcctttttt ccgccctatt ttcctgcacc tacaaccccc
      781 gaacgaagcg attccggact gagacacttt aaaaaaaaca gccattctag cagttaaccc
      841 ccttcgctcc gcccaagcca tcctgaggtg tagtggctga atttgtgatt ttggttttat
      901 caaacaaaat atttgactga agtcacatgg cggtcgtcat atgggggttc cttcgcaccc
      961 aaaaaatcga ccgcgtaacg gtttactaaa acttcatcgt ccttaaactt ttggtgcttt
     1021 ttccggcaat attttctgaa ctccgttaaa tttgacggca agaacccgca accgtctgca
     1081 ccgtaaatgt aatcaacttc aaacaaactg tctttccggg caagccgacc atctttaagc
     1141 cagaacatag gctcgaaata aaaaactttc gacgtgtccg ggaacttatg gagacggaga
     1201 acacgtgtga aatccccgtt ttcatctaca attttgatat atcttggttt gtgaatcatg
     1261 acatcctcag atttagtatt cagaatatga ttttaaaaag aactttctgc tttacgactc
     1321 cgccgccgat tccttcaaac ggttttccgc gctcttcagt tgtcgtacat gagattttgc
     1381 tacggctttc cgcccattac gagaacttgg ggcttgtccg ctttcgcgga ctgtgccgcc
     1441 tgttccgtcc tttgccgttc gtccttgtaa ggattgaaag gcaacccgtt tttcacatat
     1501 tctttacaca ttatctttgt tatttctttc aagggtgttc cttgatttga atagcatgtg
     1561 caatctgatt ttccgccgtc tatgcatccg gcgatttgct caaaggtttt tacttgtcgg
     1621 actgtgttat aaataggctt gctttcgggc ttttcgggca aagtcggcac aaagtcttca
     1681 ggtttcagat tgtcggaatg ctcaaaaggc gctgtttctg atgatgccgt ctgctccgtc
     1741 atcgtctgca caacgctttc tttttgcgct tcctgctcaa tccggctgtc tgtggctttg
     1801 ctgtaaactt gaaacatgcc gtaacttttc cagcctacaa accctacaac cgcaatcaac
     1861 gcccaaaccg cccaaggcac ttttttcttg aacttttggt gccggcttgc ggatttatag
     1921 tatttgaagg cttctttagg cggtttccaa tttgcggctt ctacgccgct cacgcctgcc
     1981 ggattgtcca acgaggttac gcatttatac caataatact gtttcatgcc gattgccttg
     2041 cgttcaaggt gtacatgctt tgaaacaagg ttgcggacga atatatcaag ttggctcggg
     2101 tgccgcgtca tcaaaatgac ggtatgcccg tgatggcgga gttctgtcag ttcctgaata
     2161 tagggcggaa cgggacggcc tgccgcgcgt accgggtaag tgtagtgcgc ttcgccaaca
     2221 atcagcaccg cgccttccgg tatgacatca cgaagcgggg cggacatgat ttgcccttcc
     2281 gccagttcgc gggcattgaa ttttcgtttg tccaatccgt cgatatggca gaaataaagc
     2341 ggccggtctg cctccgtgcc gtcttccaat tccattttga acaatccgt
//
LOCUS       DAWXHA010000162         2366 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.162, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000162 DAWXHA010000000
VERSION     DAWXHA010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.162"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(185..601)
                     /gene="dksA"
                     /locus_tag="AABD07_002011"
     CDS             complement(185..601)
                     /gene="dksA"
                     /locus_tag="AABD07_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HFB2356467.1"
                     /translation="MVKLTEQDILNWIGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     VTTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVEAQERRERMKKQFAD"
     gene            complement(750..1541)
                     /locus_tag="AABD07_002012"
     CDS             complement(750..1541)
                     /locus_tag="AABD07_002012"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HFB2356468.1"
                     /translation="MNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRERLEKEL
                     GVETSATLPELHSGDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLSVGTLSRYLGG
                     SRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDEAQMHSI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVCRSQEMERQYQ"
     gene            complement(1590..1997)
                     /locus_tag="AABD07_002013"
     CDS             complement(1590..1997)
                     /locus_tag="AABD07_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HFB2356469.1"
                     /translation="MEIRVIKYTATAALFAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPLSLEDYEIPLSDGNRSVRANEYESAQKSYFYRKIGKFEACGLDWRTR
                     DGKPLVERFKQEGFDCLEKQGLRRNGLSERVRW"
     gene            complement(1997..>2366)
                     /locus_tag="AABD07_002014"
     CDS             complement(1997..>2366)
                     /locus_tag="AABD07_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HFB2356470.1"
                     /translation="AVRLSRQRRSLMPPLQVCVEVNIAGEAAKHGVAPEEAVALAVEV
                     AKLPNLVVRGLMCVAKANSSETELKTQFQTMQKLLADLNAAGVKADVLSMGMSDDMPA
                     AIECGATHVRIGSAIFGKRG"
BASE COUNT          513 a          702 c          529 g          622 t
ORIGIN      
        1 acagtcaata ctttcagcgg gatttttttg gggaaattcg tcatgtcgct gtcggataag
       61 gttttttatc tccgccaaac gctgcgccgc ctccaacaac ccccctcttc tcctccggct
      121 gatgcgcctt tgtgaatatg ccgcctgaaa ctcggggctt cagacggcat tttgtttgcc
      181 tccatcagtc ggcaaactgt ttcttcatcc tctctcggcg ttcttgggcc tcaacggata
      241 aagtggctgt cgggcgtgcc agcagccgct tcagaccgat aggttctccc gtatcggcac
      301 agaatccata gtccccttca tcaatattgc ggatggtcgc ctgtatttta ctgagaagtt
      361 ttcgttcccg atcccgggta cggagttcca atgcgtactc ttcttcctgt gtggcacggt
      421 cggcaggatc gggggctgat tcgtgttctt ggagatgccc tgttgtaacg gaggcgtttt
      481 cgatgagttc gtcttgcatt tttaccagca attcgcggaa aaaagccaaa tggtcgtcat
      541 tcatataatc gtcttccggc ccaatccaat tcaaaatatc ttgttctgtc agctttacca
      601 taatgtatgc cctctcggtt caccgcaaaa aaaacaaagc actacaaagt ggctttattc
      661 ctttgatttt tataaggctt attgcctaag gcgtttttga aaacgcgcat cataacacgt
      721 tttggattgg tttttttatt ttctttacat tattgatatt gccgttccat ttcctgcgaa
      781 cggcacacac aggcacaaac gccctcactt atggcttcgg cgacacgatg ccgtctgaag
      841 gcttccacgg cttcgtgggt tgtcccgcct tttgacgtta catttttttg aagcttctcg
      901 aaatcttcac ccgtctgctc ggcaagggca accgctcctt taaacgttgc cagactgagc
      961 gcgcgtgctt ctgccatatc aaacccttgt cggatggcgg cattttgcaa tgcgtccagc
     1021 agataaaaca cataagccgg cccgctgccg ctgatgccgg taatgctgtg catttgcgct
     1081 tcatcttcca accaaacggt caaaccgact gatttcatga ttcgatcggc aatcctgcgg
     1141 tctgtttccg atacttccgc ttcggcatac ataccggata cgcccagccc gatttttcca
     1201 ggtgtattag gcataacccg gacaatgcgg cggcttcccc cgaggtaacg gctgagcgta
     1261 ccgaccgaca atccggctgc gacagaaagc accaatgcgc cgttggtgcg gatatttttg
     1321 cacgcggctt ccatatcctg cggtttgacg gcaagaatca aaacatcacc cgaatgcaat
     1381 tccggcaggg ttgccgaagt ttcgaccccc aactcttttt ccaaacgttc gcgcttttcc
     1441 gcaccacggt tggctatatg gatgcggtat cccccttgtt tgaccaatcc gcccgcaacg
     1501 gcagccgcca tatttccgcc gccgagaaaa taaacattca ttatttctac cctattcaaa
     1561 attaccttac taaattcatt cccaattttt taccatcgga cgcgctcgga caggccgttg
     1621 cgccgcaacc cctgcttttc caaacagtcg aaaccttcct gtttgaacct ctcaaccaaa
     1681 ggtttgccgt cacgcgtacg ccaatccaac ccgcaggctt caaacttccc tattttccta
     1741 taaaagtaag atttttgcgc ggattcatat tcgtttgccc tgacggaacg attgccgtct
     1801 gaaagcggta tctcgtagtc ctctaaagac agcggactct cgccgccaat atcccaaaaa
     1861 tcgatggcgg caggttttct cggcttacac cagccggaca aggacgaaca ctcataccac
     1921 cccgccagcc ggcagcctgc aaccgtaaat gcaaacaacg cagccgttgc cgtatatttt
     1981 attacccgaa tttccatcag ccccttttcc cgaaaatcgc gctgccgata cggacgtgtg
     2041 tcgcaccgca ctcaatggcg gcaggcatat cgtccgacat ccccatagac agcacgtccg
     2101 ccttaacgcc agccgcattg aggtcggcaa gcagcttttg catggtctga aactgagttt
     2161 tcaactccgt ttcactgctg ttggctttgg caacgcacat cagtccgcgc acgacaaggt
     2221 tgggcagctt cgccacttcc acggcaagcg cgaccgcttc ttcgggcgcg acaccgtgtt
     2281 ttgccgcctc gcccgcaatg ttcacctcga cacacacctg caagggcggc attaaggagc
     2341 gacgctgcct gctcagccgg acggcg
//
LOCUS       DAWXHA010000163         2350 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.163, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000163 DAWXHA010000000
VERSION     DAWXHA010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.163"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            98..867
                     /locus_tag="AABD07_002015"
                     /pseudo
     CDS             98..867
                     /locus_tag="AABD07_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776012.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
     gene            891..1586
                     /locus_tag="AABD07_002016"
     CDS             891..1586
                     /locus_tag="AABD07_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009751811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFB2356471.1"
                     /translation="MMLCLENVRFEILRDPIVRDFSLNLQQGEVKALFGPSGCGKTTV
                     LRLIAGLETPKSGTIRNTFHKTGFLFQENRLPENLTAMQNIAIFMDNPDEGEIVALAA
                     KVGLTAGDLNKYPTELSGGMAKRVAFLRLLLCGCDLALLDEPFVGLDRDLRDILVAML
                     VEKIERQGMACILVTHDRFEAARLSHEIMLLSAKGMNVQNVITLPTPLSERDSAFEEV
                     VVAREFQGIHYYE"
     gene            1778..>2350
                     /locus_tag="AABD07_002017"
     CDS             1778..>2350
                     /locus_tag="AABD07_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HFB2356472.1"
                     /translation="MFSTVITAAVLYIATAVDLLVILLIFFARANTRKEYRDIYIGQY
                     LGSVILILVSLFLAFVLNYVPEKWVLGLLGLIPIYLGIKVAIYDDCEGEKRAKKELDE
                     KGLSKLVGIVALVTVASCGADNIGLFVPYFVTLDLVDLLVTLLVFLILIFVLVYTAQR
                     LANISGVGEIVEKFSRWIMAVIYIGLGLFII"
BASE COUNT          540 a          442 c          666 g          702 t
ORIGIN      
        1 taagaatagg ttggcttaat cacaaccata acccaacgaa aatactaaaa ttccaagcta
       61 aggctatcct ttccaaacca tccccatcaa ccaaaccatg attaaaaccg acaaaatccg
      121 caaaccgcag cctgcgctgt tttacatcat cgactacctt tggagcggct ttgccggtct
      181 gagcgtggcg atggtggtgg tggcgttgtg ggcgtggggc agcgccgtgt tcggcgagtt
      241 tatgctgcct gcgccggtag aggtgtttca aaaatctttg gatttattga aacattttca
      301 ggaaaatgaa atcgggattt cgctgtggcg gtcggtagtg ggtatttcgg ttgctttgat
      361 agcaggattg gcggcggggc tggtggcggg cagttttaag acggcgatgg cgttgcttaa
      421 gcctgtgatt acgattttgt tagcaatgcc gccgattatt tgggtggtga tggcgttgtt
      481 ttggttcggg ttcggcaatc cgagcgtgtt gtttaccatc attgtgttgg ttgcgccgct
      541 gacgtttgcg agtgcggcgg tcggaatggc gagcgtgaac aagcagcatg aggagttgtt
      601 tgacgcttat aaattaggcc gtctgaaaaa aatccgctat ctgtatatcc cgcatctgac
      661 gggctatgtg atttccagcg tcggcgtggc ggtggcgacg ggggtgaagg cggtgatcat
      721 ggcggaactc ttaggcgcga gcaaaggcgt gggcgcgcgg attgcggacg cgagggcaat
      781 gctgtagact tcgacggtaa tggcttatgt ggtgttggtc atggtatttg tgtcgctgtt
      841 tgaatacctg attccaagcc tttgtaaatt ttgtttatgc cgtggaggag atgatgctct
      901 gtcttgaaaa cgtgcgtttt gaaatcctcc gcgaccccat cgtgcgcgat ttcagtttga
      961 acctgcaaca gggcgaagtg aaagccttgt tcgggccgag cggctgtggc aagacgacgg
     1021 ttttacggct gattgcgggc ttggaaacgc cgaaatcggg cacgatacgt aatactttcc
     1081 acaaaacggg ttttctgttt caggaaaacc gcctgccgga aaacctgacc gcgatgcaga
     1141 atatcgcgat ttttatggac aacccagacg aaggcgaaat cgtcgcgctg gcggcgaaag
     1201 tcgggctgac tgcgggcgat ttgaacaaat atccgaccga attgtccggc ggcatggcga
     1261 aacgggtggc gtttttgcgc ctgctgctgt gcggctgcga cctagccttg ctggacgaac
     1321 cgtttgtcgg tttggaccgc gatttgcgcg atattttggt tgctatgctg gtggaaaaaa
     1381 tcgagcggca gggcatggcg tgtatactgg taacgcacga ccgcttcgaa gccgcgcgcc
     1441 tgagccatga aattatgctg ctttccgcta agggcatgaa cgtgcaaaac gtgataaccc
     1501 tgcccacgcc gctgtccgaa cgcgattcgg cttttgaaga agtcgtggtg gcaagggagt
     1561 ttcaggggat tcattattat gagtgatgag gggatttgag tgtctgacaa accttacggt
     1621 tcgttgccct ctccctaacc ctctcccacg gggagagggt tagcaagcct caggcttgcc
     1681 tctttagcga aagatacgaa tctgttatcc gaacgcgatt cggtttttga aaaagccgtg
     1741 gtgccaaggg ggcaggggat tcattatgag gtgctttatg ttttcgactg tgattactgc
     1801 tgctgtttta tatattgcta cagcagtaga tttgttggta atactattaa tattttttgc
     1861 tagagcaaat actagaaaag aatatcgaga tatttatatc ggacaatatt taggttctgt
     1921 aattttaata ttagttagtt tatttctagc ttttgttttg aattatgttc cggaaaaatg
     1981 ggtgttgggt ttattaggtt taataccgat ttacttaggt attaaagttg ctatttacga
     2041 cgattgtgag ggcgaaaaaa gagctaaaaa agaattggat gaaaaagggt tgtcaaaatt
     2101 agtcggtatt gttgctttgg ttacagttgc tagttgtggt gcagataata ttggactttt
     2161 tgttccttac tttgtgactt tagatcttgt cgacttatta gttactcttc ttgtattttt
     2221 aatattgatt tttgttttag tatatacagc acaaagattg gctaatattt caggtgttgg
     2281 tgaaattgta gagaagttta gtcgttggat aatggctgtt atttatattg gtttagggtt
     2341 atttattatt
//
LOCUS       DAWXHA010000164         2301 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.164, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000164 DAWXHA010000000
VERSION     DAWXHA010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.164"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            172..366
                     /locus_tag="AABD07_002018"
     CDS             172..366
                     /locus_tag="AABD07_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356473.1"
                     /translation="MDSEYLDPQQCADILSVKKRTFLERYAPRPDFPARISVSKKRFW
                     WKKEEVEGWLDRQKEKRPVM"
     gene            complement(422..506)
                     /locus_tag="AABD07_002019"
     tRNA            complement(422..506)
                     /locus_tag="AABD07_002019"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(470..472),aa:Leu,seq:tag)
     gene            657..1331
                     /locus_tag="AABD07_002020"
     CDS             657..1331
                     /locus_tag="AABD07_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356474.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGMASIDRSV
                     LWCNDEGWKLADYLPCDDVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENAALR
                     LVCLSQQGEGLENIWEQDGNITDVSLACRSAQSGWMNVASDVRRWLNLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECADTAAQAEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            1324..1917
                     /gene="ribA"
                     /locus_tag="AABD07_002021"
     CDS             1324..1917
                     /gene="ribA"
                     /locus_tag="AABD07_002021"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HFB2356475.1"
                     /translation="MSELLDHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNCSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQAEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENERYLQTKADKLGHLMSE"
     gene            2085..2267
                     /locus_tag="AABD07_002022"
                     /pseudo
     CDS             2085..2267
                     /locus_tag="AABD07_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232500.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT          564 a          528 c          653 g          556 t
ORIGIN      
        1 aactgcgcct attgcaacaa accgcctgcc gcttcaaagc cgccctcgaa acggccgcgt
       61 ggaaacacta cgtccgcgcc atcaaagaat ccgagccggt accggatgcc gaagcgcgcc
      121 ggaagcggaa aaaacaggcg gcgtaaatat aattaagttt ggaggtttta aatggatagc
      181 gaatacctag acccgcagca atgcgcagat attttatccg taaaaaagcg tacattttta
      241 gagcggtacg caccgcgtcc ggatttcccc gcgcgaatat ccgtatcgaa gaaacgtttt
      301 tggtggaaaa aagaagaagt cgaaggatgg ctagaccgcc aaaaagaaaa acgcccggtg
      361 atgtgatttg caccacattt gcaccaagtg gcatataaca ttatgaaaga tataaaaatt
      421 ttggtgcgga cggagagact cgaactctca cacctctcgg caccagaacc taaatctggt
      481 gcgtctacca atttcgccac gtccgcataa gggtggagat tatacagatt ttgtccgatt
      541 gcgcaaggct ttggacgtaa tagttgaggc ttatgctttg cagcggtaaa atccgctatt
      601 cgtccgcctg gcatcggaat cgggcggttt tttgttttta ttgacggaat ttgggtatgc
      661 ctgctgcttt gattaaggat tttctgctga ctcagggttt gaagctgccg cttgacgagg
      721 ttcgggcggc gtatctgacg gcgcagacgg taatggatat ggggatggct tcgattgacc
      781 gttctgtttt gtggtgcaat gatgagggtt ggaaacttgc cgattacctg ccgtgcgatg
      841 atgtccgcga agatgccctg aaacggcttt ttatggcttt ggattcggtg ttttcacgct
      901 cgacaggtgt gcggagcgcg gcggtttatg ccttgatgcc gtctgaaaac gccgccctcc
      961 ggctggtgtg cctgtcccaa cagggcgaag gtttggaaaa catatgggag caggatggaa
     1021 atattaccga tgtttcgctt gcctgccgtt cggcgcaaag cggttggatg aatgttgcct
     1081 cggatgtacg ccgttggttg aatttgggtg agctttcggg agaacgcaat catgcttcgg
     1141 cggcgcaaat ttccattccc gtttgcacgg agagcggcgg tgtattgggc gtggttcatg
     1201 tggaatttga atgcgcagag tgtgcggata cggcggcgca ggcggaatgg gtggctcttg
     1261 ccttggcttt gtccgaacct ttgaagcaac ttttgggcat cactgccgca gaaggagatg
     1321 aaaatgtctg aattattaga ccatgtcgct tcctgccgtc tgccgaccga atggggcgta
     1381 tttacgatgc acggttttga agaggcaaac gggcaggaac acgtcgcgct gaccgtcggc
     1441 aattgttcag acggcaatcc ggtgttgacg cgcatccact ccgaatgtct gacgggcgac
     1501 gcgctgttct cgagaaaatg cgactgcgga ccgcaacttg aagcggcaat gagggcggta
     1561 caggcagagg ggcgcggcat catcgtctat ctgcgtcagg aaggacgcgg catcgggctg
     1621 attaacaaaa tccgcgccta tcatctgcaa gaacaaggta tggataccgt tgaagccaat
     1681 ttggcactcg ggctgcccgt cgatgcccgc gatttccgtt tggcgcaatc tatctacgaa
     1741 tatctgggca tccgctcggt caaactgttg accaacaacc ccgaaaaaat ccaaaccctg
     1801 aaagatgcgg ggattaacgt ggtcgaacgc attcccctgc acgtcgggga aaatctggaa
     1861 aacgagcgtt atctccaaac caaagcagac aagctggggc atttgatgtc ggaataaggc
     1921 aaagttgcag ggaacgggca tcctgcgccg tctttcggga aacaggtttc catagcttga
     1981 taaagcaata agttttatca agttgcaggg tgcggatgca aacgcattgc gagcgcgggt
     2041 ttgaggcata cgcgcaaaca tcttaataca acgtattgat atttatgatt ttctctatca
     2101 tcgtccctat ttacaatgtg gaaaaatacc ttcgctgctg cgtggattcc gtgcttgccg
     2161 aaaattttgc cgattatgaa atgattttgg tcgatgacgg ttcgccggac ggctgcggga
     2221 agatttgcga cgaatatgca ggcaaatatc cgcatataag ggtaatccca tgcgtaacgc
     2281 cgtaggatta gacatatcca a
//
LOCUS       DAWXHA010000165         2201 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.165, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000165 DAWXHA010000000
VERSION     DAWXHA010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.165"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            117..2045
                     /gene="dnaK"
                     /locus_tag="AABD07_002023"
     CDS             117..2045
                     /gene="dnaK"
                     /locus_tag="AABD07_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HFB2356476.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSIIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKADNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKIAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKTAIDAKAEALGTASQKLGEMVYAQAQAEAQAGEGAQANASAK
                     KDDDVVDADFEEVKDDKK"
BASE COUNT          682 a          585 c          513 g          421 t
ORIGIN      
        1 acttatggcc atgctgtagc ttgaaacagc ccgccgcccg ccctatttac agcccatcgg
       61 gacaaaatgt tccaacatat ttctcaaaat aagcaaaatc aaataggagt atccacatgg
      121 caaaagtaat cggtatcgac ttaggtacaa ccaactcttg tttggccatt tccgaaaacg
      181 gtcaaaccaa agtcatcgaa aacgcagaag gcgcacgcac cacgccgtcc attatcgctt
      241 atttggacgg cggcgaaatc ctcgtcggcg cgcctgccaa acgccaagcg gtaaccaacg
      301 ccaaaaacac tatttacgcc gccaaacgtt tgatcggtca caaatttgaa gacaaagaag
      361 tccaacgcga catcgaatct atgcctttcg aaatcatcaa agccgacaac ggcgacgcat
      421 gggtaaaagc acaaggcaaa gagctgtctc ctcctcaaat ttccgcagaa gtcctgcgta
      481 aaatgaaaga agccgccgaa gcttacttgg gcgaaaaagt aaccgaagcc gtgattaccg
      541 tccctgccta cttcaacgac agccaacgtc aagccaccaa agacgcaggc cgtatcgccg
      601 gtttggacgt aaaacgcatc atcaacgagc cgaccgcagc cgctttggca ttcggtatgg
      661 acaaaggcga caacaaagac cgcaaaatag ccgtatatga cttgggcggc ggtaccttcg
      721 atatttccat catcgaaatc gccaacctcg acggcgacaa acaatttgaa gtattggcta
      781 ccaacggcga tactttcttg ggcggtgaag acttcgacca acgcttgatt gactacatca
      841 ttgacgagtt taaaaaagaa caaggcattg atttgaaaca agacgtaatg gctctgcaac
      901 gtctgaaaga agctgccgaa aaagccaaaa tcgaattgtc cagcggccag caaaccgaaa
      961 tcaacctgcc gtacattacc atggacgcaa ccggcccgaa acacttggca atgaaaatta
     1021 cccgcgccaa attcgagagc ctggttgaag acctgattgc ccgctctatc gagccttgcc
     1081 gcaccgcatt gaaagatgcc ggcttgagca ccggcgacat cgacgacgtg attttggtcg
     1141 gcggtcagtc ccgtatgccg aaagtacaag aagccgttaa agacttcttc ggcaaagaac
     1201 cgcgcaaaga cgtgaaccct gacgaagccg ttgccgtagg tgcagcgatt caaggcgaag
     1261 tattgagcgg cggccgcagc gacgtattgc tgctggacgt aacccctctg tccttgggta
     1321 tcgaaaccat gggtggtgtg atgaccaagc tgattcaaaa gaacactact attccgacta
     1381 aagcgtctca agtgttctct actgccgaag acaaccaaag cgcagtaacc atccacgtac
     1441 tgcaaggcga acgcgaacgc gcttctgcca acaaatcttt aggtcaattc aacttgggcg
     1501 acatcgcacc cgcaccacgc ggtatgccgc aaattgaagt tactttcgac atcgacgcca
     1561 atggtatctt gcacgtttcc gccaaagaca aaggcactgg caaagcggcc aacattacca
     1621 tccaaggttc ttcaggtttg agcgaagaag aaatcgaacg catggtgaaa gatgccgaag
     1681 ccaatgccga ggaagataaa aagctgactg aattggtcgc ttcccgcaac caagccgaag
     1741 ccctgattca ctccgtgaaa aaatctttgg cggactacgg cgacaaactc gacgctgccg
     1801 agaaagaaaa aatcgaagcc gcgctgaaag aagccgaaga agccgtgaaa ggcgacgaca
     1861 aaaccgccat cgatgccaaa gccgaagcac tgggcacagc cagccaaaaa ctgggcgaaa
     1921 tggtttacgc gcaagcgcaa gccgaagccc aagccggcga gggcgcacaa gccaatgctt
     1981 ctgcaaagaa agacgatgat gtcgtagatg ccgactttga agaagtaaaa gacgacaaaa
     2041 aataattgat gccgtctgaa aaaaacgcga accattcggt tcgcgttttt ttcaattgag
     2101 ataaaagaca atagcatgac agagattcca aattcatcta ccgtgatatt cccaagccca
     2161 agttccaact gttgcatcgg ttatctggaa atttttcata t
//
LOCUS       DAWXHA010000166         2129 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.166, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000166 DAWXHA010000000
VERSION     DAWXHA010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.166"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(44..1012)
                     /gene="ispH"
                     /locus_tag="AABD07_002024"
                     /gene_synonym="lytB"
     CDS             complement(44..1012)
                     /gene="ispH"
                     /locus_tag="AABD07_002024"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HFB2356477.1"
                     /translation="MNGKTIILANPRGFCAGVDRAISIVERALEEFGAPVYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVQQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQNCEIIMIGHKGHAEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNASYLQRTWFEGKSKVGVTAGASAPEVLV
                     REVLAAIRGWGHETVREGGGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1042..1536)
                     /gene="lspA"
                     /locus_tag="AABD07_002025"
     CDS             complement(1042..1536)
                     /gene="lspA"
                     /locus_tag="AABD07_002025"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HFB2356478.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFAALGKIGAAM
                     IIGGASGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKD
                     SKKT"
BASE COUNT          481 a          614 c          547 g          487 t
ORIGIN      
        1 atttgtattg cccaaacatc cgatgcctgc gttaacgcct gcgtcaacgt ttgcacaaat
       61 cgggtttggt ttcgccctcg cggcgcagct ccttgggcag gacgaacacg atgctttctt
      121 ccgcgccccc cccttcgcgc acggtttcat gcccccatcc gcgtatggct gccaatactt
      181 cccgcaccaa cacttcgggc gcggacgcgc ctgccgttac gccgactttg cttttgcctt
      241 caaaccacgt gcgttgcagg taggacgcgt tgtccaccat atacgcatcg attccgcgcg
      301 atgccgccac ttcgcgcagg cggttgctgt tggacgaatt gggcgaaccg accacaatca
      361 cgatgtcgca ctgttccgcc agctctttga cggcggtttg ccggttggtc gtcgcatagc
      421 agatgtcttc cttgtgcgga ttgcggatat tggggaaacg cgcgttcagc gcggcgatga
      481 tgtctttggt ttcatcgacc gagagcgtgg tttggctgac ataggcgagt ttgtcggggt
      541 ttctgacttc gagttttgcc acatctccga ccgtttcgac caaaagcatt ttgcccggtg
      601 caagctgccc catcgtgcct tcgacctcgg cgtgcccctt atgcccgatc atgatgattt
      661 cacagttttg ggcatccagt cgggcgactt ccttatgcac tttcgtcacc agcgggcaag
      721 tcgcatcaaa tacccggaaa ccgcgctccg ccgcttcctg ctgcaccgcc ttcgatacgc
      781 cgtgtgccga ataaaccagt gtcgcgcccg gcggcacttc cgccaagtct tcgataaaca
      841 ccgcgccttt ttcgcgcagg ttgtccacga cgaatttgtt gtggacgact tcgtggcgca
      901 cataaaccgg cgcgccgaat tcttccaaag cacgttcgac aatactgatt gcccgatcca
      961 caccggcgca gaagccgcgc ggattggcaa ggatgatggt ttttccgttc ataagttttg
     1021 cattccgtgt tcagacggca ttcacgtttt tttgctatct ttgcgatgga cgatattgtc
     1081 aagcaccgcc aacaccgcac cgacgcagat aaagctgtcg gcaatattaa aggcgggata
     1141 aaaccaattt tgccaataaa acaataagaa atcgacgaca tgaccgtgta tcaggcgatc
     1201 gatgacattg cccgacgcac cgccgataat cattgccgcc ccgattttgc cgagggctgc
     1261 aaactcgtcg cgcaagatgg cgcgtaccaa atacgcgctc accgccaccg ccagcaccaa
     1321 aaaaaagtat ttctgccagc cgccctgatc ggcaaggaag ctgaatgccg cgcccgggtt
     1381 gtacaccagc gtcagatcga aaaacgaagg gatgacgttg acgcgttccc gatactgaaa
     1441 cgacgacagc accgcccact tcgaccactg gtccagcacg atggcggcaa gtgccaatac
     1501 ccaatagcgc gttttacttg aaacagatga agacatattt ttcaacagcc ggataaaaga
     1561 gtgccattct acccgaaaac cccctttcct gtacccgaaa cggcaaatgc cgtaatcttg
     1621 aaacccgtca ttcccgcgca ggcgggaatc cggacctgtc cgcacggaaa cttatcggat
     1681 aaaacggttg cccaaacccc gcgtcctaga ttcccacttt cgcgggaatg acggttcggt
     1741 tgcgtagggc cgggtggtcg aaaaggcgga ttcgatggat tcgatgaaaa cggtagacat
     1801 gttggattga tggaaatggc gggccgaagc acaccctacg acccgccgga tttccgcctg
     1861 cgcgggaatg acggggtttc aggttgctgt ttcaggtttc tgtttttaag tttctgtttc
     1921 ggtttgctat tttatagaaa tgacgaaatt ttagattgca agaacttatc ccctccgccg
     1981 tcattcccac ggaagtggga atctagaaat aaaaagcagc aggaatttat cggaaataac
     2041 tgaaaccgaa cggaccggac tcccgcccgc gcgggaatga cggctgcaga tgcccgacgg
     2101 tctttatagc ggattaacaa aaatcagga
//
LOCUS       DAWXHA010000167         1859 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.167, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000167 DAWXHA010000000
VERSION     DAWXHA010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.167"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            111..1100
                     /gene="pheS"
                     /locus_tag="AABD07_002026"
     CDS             111..1100
                     /gene="pheS"
                     /locus_tag="AABD07_002026"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HFB2356479.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDPEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFE"
     gene            1117..1530
                     /locus_tag="AABD07_002027"
     CDS             1117..1530
                     /locus_tag="AABD07_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFB2356480.1"
                     /translation="MDKLTPEQRKKCMQSNKSTGTKPELVLAKAMWALGLRYRKNSGS
                     IFGKPDFSFKKYKVAVFVDGEFWHGKDWEQKKAVIKGNREFWIAKIERNIQRDIEVTG
                     RLKAEGWTVLRFWSNDVVKNTTCCAEKVKEIIQTR"
     gene            1532..>1859
                     /locus_tag="AABD07_002028"
     CDS             1532..>1859
                     /locus_tag="AABD07_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFB2356481.1"
                     /translation="MIYKNKIKEDGQDERLKEKAAQYRLFENNDTFQTALKPKFTFID
                     LFAGIGGFRIAMQNLGGEYVFSSEWDEKAKLTYEANFGEVPFGDITLEEIKQYIPKQF
                     DVLCGFT"
BASE COUNT          536 a          413 c          461 g          449 t
ORIGIN      
        1 atggattggc cgtgaagaaa ataaggtcgt ctgaagagtc tgatatgtca ggctatacag
       61 gcggcctcgt tgtttcaggt ggcatatcat taattgacag gcttgatatt atggaaaatg
      121 taaaccgtat cgttgcagaa ggcattgccg cagtagaagc tgcgcaagac ttcaacgctc
      181 tagaacaaat caaagcccgt tatcttggca aaaccggcga gttgaccgga cttctgaaaa
      241 ctttggggca aatgtcgcct gaagagcgca aaaccatagg tgcgcatatc aatgaatgca
      301 aaaaccggtt tcagacggct tttaatgcca aacgcgatgc cctcaacgaa gccaagctgc
      361 aagcccgact tgccgccgaa gccctcgaca ttaccctgcc cggacgcgct caggaaggcg
      421 gcagcctgca tcccgtaacc ctgaccttgc aacgtgtggt cgaactcttt cacggaatgg
      481 gtttcgaagt ggcggacggg cctgaaatcg aagacgattt tcacaatttc caagccctga
      541 acatccctgc aaaccatcct gcccgtgcga tgcaggatac gttttacgtt gaaaacggcg
      601 atgttttgcg tacgcacact tccccgattc aaatccgcta tatgctcgat aaaaaagagc
      661 cgcccatccg cattatcgcc cccggccgcg tttaccgtgt ggacagcgat gccacgcact
      721 cgcctatgtt ccatcaggcc gagggtttgt gggtagaaga gggcgtaact tttgccgact
      781 taaaagcagt gttcactgac tttatccgtc gcttctttga acgcgatgac ctacaagtgc
      841 gtttccgtcc gtctttcttc ccatttaccg agccttctgc cgaaatcgac atcatgggag
      901 aaaacggcaa atggttggaa gtaggcggtt gcggtatggt acatcctaat gtgttgaaaa
      961 atgtcaatat cgaccctgaa aaatataccg gtttcgcttt cggtattggt ctcgaccgct
     1021 ttgccatgtt gcgctacaac gtcaatgacc tgcgcttgtt cttcgataac gatttgaact
     1081 tcttgaagca gtttgaataa atctcaaata aacccaatgg ataaattaac cccggagcag
     1141 cgcaaaaaat gtatgcagtc caacaaaagt acagggacga aacccgagct tgtgttggcg
     1201 aaggcaatgt gggctttggg gctcaggtat cggaaaaata gcggaagcat ttttggaaaa
     1261 cctgattttt catttaaaaa atataaagtt gccgtatttg tcgatgggga attctggcac
     1321 ggtaaggatt gggaacagaa aaaagcggta ataaagggaa atcgtgagtt ttggattgcc
     1381 aaaattgagc gcaatatcca aagggatata gaagtaacag gccgtctgaa agccgagggc
     1441 tggacggttt tacgtttttg gagtaacgat gtcgtcaaaa atacaacctg ctgtgccgaa
     1501 aaagtcaaag aaatcatcca aacaagatga attgatttac aaaaacaaga ttaaggaaga
     1561 tgggcaggat gaacggttaa aagaaaaagc agcacaatac cgcctttttg aaaacaacga
     1621 tacttttcag acggccttga aacccaaatt tacctttatc gacttgttcg caggtatcgg
     1681 gggcttccgc atcgcgatgc agaacttggg cggggaatac gtgttttcga gcgagtggga
     1741 cgaaaaagcc aaactgacgt acgaagccaa tttcggagaa gtgccgtttg gcgatattac
     1801 tttggaagaa atcaaacaat acattccgaa gcaatttgat gtgctgtgtg ggtttacct
//
LOCUS       DAWXHA010000168         1784 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.168, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000168 DAWXHA010000000
VERSION     DAWXHA010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.168"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            189..968
                     /locus_tag="AABD07_002029"
     CDS             189..968
                     /locus_tag="AABD07_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFB2356482.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            1177..>1784
                     /locus_tag="AABD07_002030"
     CDS             1177..>1784
                     /locus_tag="AABD07_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HFB2356483.1"
                     /translation="MAAHNKLTQKQIEAAKADGKQSKLADGGGLYLLLHPNGSKYWRM
                     RYRHGGCEKTLALGVYPAVSLKQARELARAARAQTAAGIDPVAEHHRTRPGSGRSLPE
                     IARAWYGSRQGQRADNTLEGDRRSLAYLTDYYKDNTDINDITTAGVSKFIEHLNRINI
                     PACARRTVQILAQIWDYAVQRGIITDERRNPATTARPLLNTS"
BASE COUNT          520 a          589 c          365 g          310 t
ORIGIN      
        1 gccgaaactt ttgtaaaact gtccatactc attaccgcct agtcggtaat gcatttttta
       61 gtagtatttg aaaaagtatg atgataaaaa cggttaagcc taactttttc ataaaatcca
      121 gcagagtaag gcagaaaaaa acacccaaat tggctataat cccgacaaac acactcaagg
      181 acaacaacat ggcagcctcg cccgaagcaa aattcaccga agaaaagatt ttgtgggtca
      241 aacaccacac gccgaaactc atcactttcg ccatcagccg tcccgaatcc taccgtttta
      301 aagccggaca gttctcccga ctcggtttct acgaaggtaa aggctttatt tggcgtgcct
      361 attccgtcgt ttccgcagaa tatgccgaca cgctcgaata ttttgccgta ctcatccaag
      421 acggccccat gtcggccctt ttcgccaaaa tgcaacaggg cgacaccatc ctgctcgata
      481 aaaatgccac tggctttctc ctgcccgaac gcttccccga cggcaaggat ttggtgatgc
      541 tctgtaccgg ctcgggcatc gcccccttcc tttccattct cgaacaaccc gaaatccggc
      601 agcgtttcga taccgtcaac ctgatacatt ccgtatcttt tcccgaagaa ttgattttca
      661 acgaccggct ggccgcattg tccgaacatc ccctggtagg cgaatacgga cactcgttcc
      721 gtttcgtccc tgttaccacc cgtgccgcca acccctcggg cttaagcgga aaacgcattc
      781 cggaactctt aaaaaacaac agcatcgaac aggcgctgca taccaagctc accccggaat
      841 ccacacggtt tatgatttgc ggtaacccgg aaatggtcaa agacactttc caaacgctgc
      901 tcgatatggg ttacgccatg caccgcaacc gcattcccgg tcaaatcatg atggaaaacg
      961 gcttctaaaa acgaacgctc ccaaccccta cccacgccca cacacaaaac aaaataaaaa
     1021 acagcgatat acaaaaacca atttgcaaaa acagacctca cgcctatact gccactcaca
     1081 gcaagcaaca caaaaaagcg ggtacaaatt agggtacaaa acacaagccc gaacacagaa
     1141 gcaccccaac caaacccaaa ggcaaaggca aacaaaatgg cggcacacaa caaactgacc
     1201 caaaaacaaa tagaagcagc caaggcagac ggcaaacaaa gcaagctggc cgacggcggc
     1261 ggcttatatc tgctgctgca ccccaacggc agcaaatact ggcggatgcg ctaccggcac
     1321 ggcggatgcg aaaaaaccct agccttgggc gtatatcccg ccgtcagcct caagcaggcc
     1381 cgcgaacttg cccgcgccgc ccgggcgcag accgccgccg gcatcgaccc cgtcgccgaa
     1441 caccaccgca cccgtcccgg cagcgggcgc agccttcccg aaatcgcccg cgcgtggtac
     1501 ggcagccgtc aagggcaacg cgccgacaac acactggaag gcgaccgccg ttcactcgcc
     1561 tacctgaccg actactacaa agacaacacc gacatcaacg acatcaccac cgccggcgta
     1621 tcaaaattta tcgaacacct caaccgcatc aacatccccg cctgcgcccg gcgcaccgtc
     1681 caaatcctcg cccaaatatg ggactatgcc gtccagcgcg gcatcattac cgacgaacgg
     1741 cgcaaccccg caaccaccgc ccgcccactg ctaaacacaa gcaa
//
LOCUS       DAWXHA010000169         1775 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.169, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000169 DAWXHA010000000
VERSION     DAWXHA010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.169"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(392..1435)
                     /locus_tag="AABD07_002031"
     CDS             complement(392..1435)
                     /locus_tag="AABD07_002031"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HFB2356484.1"
                     /translation="MSKKIKAGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEAGDNFKAYGTAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGSDPETVLRDYYRDSPFMDI
                     LPAGSTPETRSVRGANLCRISIRQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     EETHGLGGIPLLP"
     gene            complement(1432..1725)
                     /locus_tag="AABD07_002032"
     CDS             complement(1432..1725)
                     /locus_tag="AABD07_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356485.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQAVGQRSDGIPANHTKEKP"
BASE COUNT          368 a          465 c          574 g          368 t
ORIGIN      
        1 ctatattatt tttgacacat tttcatgatt ttaaatcccg ttattcccaa gcgggcggaa
       61 atccggcaat gagaagccgc agaggcttat cgggaaaacg gcaagccccc cgccgtcatt
      121 cccgcgcagg cgggaatcta gaaatgaaaa accacggtgt tatcggaaac gattgaaacc
      181 ggagaaatga cggaatcgaa gcgtgtggaa atgtgtcgga aattgctgaa gccggataaa
      241 ctagattccc gcttttgcgg gaatgacggt attttagatt tttgttttcg cggaatgatg
      301 agccaaaagc cgtccgaacc caaaaaaacc gccgctttca gacggcatca aaaaaccgca
      361 ggcacgatgc ctgcggtttg ccgtttgcgc ttcaggggag cagggggatg ccgcccaagc
      421 cgtgtgtttc ctccagtccg aacataatgt tcatattttg caccgcctgt cccgccgcgc
      481 ctttgacgag gttgtcgatg acggaaagga cgacccacac atcggattgc gccgcctgac
      541 ggatgctgat gcggcagagg tttgcgccgc gcacgctgcg ggtttcgggt gtcgaaccgg
      601 cgggcaggat gtccatgaac gggctgtcgc ggtagtagtc gcgcaggacg gtttcggggt
      661 cgctgccgtc tgaaaggtgg aggtaaacgg tggcgtgcat accgcgtatc atcggcgcga
      721 ggtgcggcgt gaacacgaat ccttcggcga tgccgtcctg aagcccggcg atggtctgcc
      781 tgatttcggg caggtggcgg tgtccggctg tgccgtaggc tttgaagttg tcgccggctt
      841 cgcacaacag cgaaccgaca ttgcctttcc tgcccgcgcc ggacacgccg gatttgcagt
      901 cggcaatcag cggcataccg ggcttcagac ggcattgccg caacagcggc acgagcggca
      961 gggatacgca ggtcgggtag cagccggggt tggcgacgag gcgcgcctgt gcgacggctt
     1021 cgcggttgag ttcgctcaat ccgtacacgg cttgggaaac gaggccgggg gcggcgtggg
     1081 tcatgccgta ccagtgttcc caggtcggaa tgtcccgtat gcggaagtcg gcggaaaggt
     1141 cgatgacgcg cacgccctgt tcaatcaggc gcggcgcgtc tttcatggcg atgccgttgg
     1201 gcgtggcgaa gaagacgatg tcgcattgtt ccaaacctgc ctcgtcgggc gtttggaagg
     1261 cgaggccgta cacgccgcgc agacttggaa agtaatcggc aactgcggtt cccgcttcgc
     1321 tgcggctggt tacggcggcg acttcgacat ctggatgggc ggcaagcagg cgcagcagtt
     1381 ccacgcccgt gtagcccgtc gcgccgacaa tgccggcttt gatttttttg ctcatggttt
     1441 ttcctttgtg tggttggcgg gtatgccgtc cgaacgctgt ccgacggctt gtccgacggg
     1501 gttttgattg gcggcggaag gacggtacac aaagcgtttg aaaagcgtgt ctaatttaat
     1561 ggcatccgcc tctgttttta aaacccagcc ctgccgtccg gaataaacat aaccgtaggc
     1621 gcgaaagccg gcaggatatt tcggtgcctg ccccaaaccc aaaccgtatg cggcgaaagc
     1681 ggtggtcgtg gagaaggaaa gcaggaggag gacgagggtt ttcataaggt tccaaaccga
     1741 acggggcgat gaagcccgat tatagcaaaa ggtcg
//
LOCUS       DAWXHA010000170         1773 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.170, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000170 DAWXHA010000000
VERSION     DAWXHA010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.170"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..223
                     /locus_tag="AABD07_002033"
     CDS             <1..223
                     /locus_tag="AABD07_002033"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356486.1"
                     /translation="IPAQAGIRICRDSLKSGGGGMVLQINDVDTNSGEFAIYTAQDAS
                     VKLDLLKMELKHCKEMLEQKTKKSSCSAS"
     gene            326..895
                     /gene="rsmD"
                     /locus_tag="AABD07_002034"
     CDS             326..895
                     /gene="rsmD"
                     /locus_tag="AABD07_002034"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HFB2356487.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFASADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIACSDGIAYLANLKEKFDVVFLDPPFAWQSWESLFNVLGTRLNDGAYVYIEAGRQ
                     PDKPDWLTGYREGKSGQGTFELRVFQVAE"
     gene            1018..1269
                     /locus_tag="AABD07_002035"
     CDS             1018..1269
                     /locus_tag="AABD07_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HFB2356488.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            1365..1448
                     /locus_tag="AABD07_002036"
     tRNA            1365..1448
                     /locus_tag="AABD07_002036"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1399..1401,aa:Tyr,seq:gta)
     gene            1479..1552
                     /locus_tag="AABD07_002037"
     tRNA            1479..1552
                     /locus_tag="AABD07_002037"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1511..1513,aa:Gly,seq:tcc)
     gene            1562..1636
                     /locus_tag="AABD07_002038"
     tRNA            1562..1636
                     /locus_tag="AABD07_002038"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1594..1596,aa:Thr,seq:ggt)
     gene            1685..>1773
                     /locus_tag="AABD07_002039"
     CDS             1685..>1773
                     /locus_tag="AABD07_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011863965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HFB2356489.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTA"
BASE COUNT          497 a          402 c          457 g          417 t
ORIGIN      
        1 cattcccgcg caggcgggaa tccggatttg tcgggattcg ctcaaatcgg gcggcggcgg
       61 gatggtgttg cagattaacg atgtggatac caacagcggg gaatttgcaa tctataccgc
      121 tcaggatgca tcggtaaagc tggatttgtt aaaaatggaa ttgaaacact gcaaagaaat
      181 gttggaacaa aagacaaaga aatcgagttg ctccgcaagc tgaccgaaac cgtttaaaca
      241 gatatgccgt ctgaaaaaag ttttcaggcg gcatattctt cgacaggtct tgtataatac
      301 cgtttgaact ttcaggcttt tgattatggc ggcaggcaaa cataccaaac acagcaaccg
      361 ggtacgcatt atcggcgggc aatgccgggg caggaaattg agttttgcat ccgccgacgg
      421 actgcgccca acccccgaca gcgtgcgtga aaagctgttt aactggctgg gacaggattt
      481 gacgggaaaa acggttttgg atctcttcgg aggcagcggc gcactcggta tagaagccgc
      541 ttcgcgcaac gccaaacgcg tgctgatttc ggataacaac cgccaaaccg tgcagacctt
      601 gcagaaaaac agccgcgaac tgggtttggg gcaggtgcaa atcgcctgtt cggacggcat
      661 cgcatatttg gcaaacctaa aagagaaatt cgatgtcgtc ttccttgatc cgccgtttgc
      721 gtggcaaagt tgggaaagtc ttttcaatgt attgggcaca cgcctgaatg acggcgcata
      781 tgtttatatc gaggcaggca ggcagccgga caaacctgat tggctgacgg gatataggga
      841 ggggaagtcg gggcagggta catttgaatt aagggttttc caagtggctg aataatatgc
      901 gctttgataa tcatttccgg gttgtaaaca ttcgtttgca accgtccggt tcaaaaaaac
      961 cttgtgctat aatccgcgcc cgcccggttt tgataattta gtggaaaagg aaaagaaatg
     1021 tcgcttttta ttaccgacga gtgcatcaac tgcgacgtat gcgaacccga atgccccaat
     1081 gatgccattt cccaaggcga ggaaatttac gaaatcaacc ccaacctctg cacgcagtgc
     1141 gtcggacact acgatgagcc gcagtgccag caggtttgcc cggtggactg catcctgatt
     1201 gacgaagaac atcccgaaac ccatgacgag ttgatggcga aatacgaaaa gattatccag
     1261 tttaaataaa ttctttttaa aacatcaaat tatgtctgtt ttgaaataaa atcaaaaaaa
     1321 acttgacgga aaagcaagcc gctaataaac tagtgttctc ttttggaggg attcccgagc
     1381 ggtcaaaggg ggcagactgt aaatctgttg cgaaagcttc gaaggttcga atccttctcc
     1441 ctccaccaaa attcttactt ggggcagtag cgagtaatgc gggtgtagct caatggtaga
     1501 gcagaagcct tccaagctta cggtgagggt tcgattccct tcacccgctc caaacaatta
     1561 agcccatgta gctcaggggt agagcactcc cttggtaagg gagaggtcgg cagttcaaat
     1621 ctgcccatgg gcaccatctc tcgattattc atttctttaa ggcttagata tataggatat
     1681 tgccatggct aaggaaaaat tcgaacgtag caaaccgcac gtaaacgttg gcaccatcgg
     1741 tcacgttgac catggtaaaa ccaccctgac tgc
//
LOCUS       DAWXHA010000171         1737 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.171, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000171 DAWXHA010000000
VERSION     DAWXHA010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.171"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(126..1547)
                     /locus_tag="AABD07_002040"
     CDS             complement(126..1547)
                     /locus_tag="AABD07_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HFB2356490.1"
                     /translation="MRHLPLFSLMLFPASVYAADSDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHYHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQDRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILITLTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINTMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGPLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLVFFVFKLL"
BASE COUNT          448 a          404 c          528 g          357 t
ORIGIN      
        1 cggcacaccg tcccggcagc taaaaatcct gcgggatcgg tgtggaattt agggataatc
       61 tagtacagcc cctttgatta tgccggaatt taaaatgccg tctgaatgtt cagacggcat
      121 agcgtttaca gtagtttgaa aacgaaaaag acgagggtat gtacgatgaa gacgggtgtc
      181 aggaaggcga ccgaccacat catatagccg aagaaagtcg gcatcggtac gccgcgctgt
      241 tcggcaatgg ccttgaccat gaagttcggt gcgttgccga tgtaggtcag tgcgcccatg
      301 aataccgaac ccatagaaac cgccagcagc gaatgaaaca ggggacccgt cattaaggct
      361 tgggcatcgc cgcccgccat attgaaaaac acgagataag tgggcgcgtt atccaagaat
      421 gccgacaata tgccgctcat ccagaaatac atcgtattaa tcggatgacc tgccgtatcg
      481 tgaaccagcg ataccacccc gcccagcgcg cctgcctcgc ctgctttcag aatgctcagg
      541 acggggaaga tggtgatgaa gatgccgagg aagagtttgc ccacttcggc gatgggttca
      601 aagttgaatt cgttgcctgc gcggacttgt ttgggcgtga ttgccataga tacggcggtc
      661 aatgtaatca ggatgacatc gcggacaagg ttttgcaggg cgtaacggct gccgaggatt
      721 tcaaatcccg ggtgttcggg tttccaaagg ccggacatta gaaccgcgcc gaccacgccc
      781 gaaagcagga ggaagttcca tttgccgaag atggcgattt tttcgggttt ttcctgttgt
      841 gccggcgtat cttgtgcaat gctttcctgt ttgaagaaac ggttgtcgat gaaatagaag
      901 gcggtcaaca ggacagcggt gctaatcagg acgggggcga acatatgttt gaccgtccac
      961 atgaaatcta cgcctttgag gaagccgagg aagagtgggg ggtcgcccaa aggggtcagg
     1021 ccgccgccga tgtttgcaac caggaaaatg aagaagatga cgatgtgcac gcggcgggta
     1081 cggtcttggt tggctttcag cagcggacga atcatcagca ttgccgcgcc ggtcgttccc
     1141 atgatagagg caagtgccgt accgacggca agcagggcgg tgttgagctt gggtgtgccg
     1201 ttcaagtcgc cccaaaccaa aatgccgcct gaaatggtgt acagggcaag cagcagcagg
     1261 atgaagggga tatattcttc aacgagtgcg tgtgcgacgg tatggatacc ggcggacgcg
     1321 ccaaaaacca aactgaacgg gatgaggaag agcaatgtcc aaaaggcggt gattttgccg
     1381 taatggtaat gccaggtatg cgaaaaaaac aagggaccca atgcgataga cagcaaaatc
     1441 agggcaaagg gcaagcccca cagcaggttt aggtttgcgc cgtccgaatc tgcggcgtaa
     1501 accgatgccg ggaaaagcat tagtgaaaac aggggtaggt ggcgcatcgt gtttcctcga
     1561 ttcaagcact gccttgcgcg gcgcgcggga gtgatacagg cttcgtgccg cccggacata
     1621 ggcggactgt gctgcctgtt tgtttttgaa aaaagttttc cgattgattg taaagtaaat
     1681 aatcaggata aaccagtttc ccaaaccgga aggcggcggg aaggcggatt gccgtgc
//
LOCUS       DAWXHA010000172         1693 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.172, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000172 DAWXHA010000000
VERSION     DAWXHA010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.172"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(74..>1693)
                     /locus_tag="AABD07_002041"
     CDS             complement(74..>1693)
                     /locus_tag="AABD07_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HFB2356491.1"
                     /translation="WLLLLMAFAWLWPGVFSHDLWNPAEPAVYTAVEALAGSPTPLVA
                     HLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFAGVFFAVIGLTSCGFAGFNF
                     LGRHHGRSVVLIHIGCIGLIPVAHFLNPAAAAFAAAGLVLHGYSLARRRVIAASFLLG
                     TGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLTAVASLAFALPLMTVYPLLL
                     AKTQPALFAQWLNYHVFGTFGGVRHIQTAFSLFYYLKNLLWFALPALPLAVWTVCRTR
                     LFSTDWGILGIVWMLAVLVLLAFNPQRFQDNLVWLLPPLALFGAAQLDSLRRGAAAFV
                     NWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSPYYVPDIDPIPMAVAVLFTP
                     LWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWLDAAKSHAPVVRSMEASFSP
                     ELKRELSDGIECIGIGGGDLHTRIVWTQYGTLPHRVGDVRCRYRIVRLPQNADAPQGW
                     QTVWQGARPRNKDSKFALIRKIGENILKTTD"
BASE COUNT          431 a          495 c          498 g          269 t
ORIGIN      
        1 aatttaatcc actatataaa ggtttaatcg cgcaattata cgcgatttcc ggcacttaat
       61 ccagaaattc ggctcaatct gttgttttta atatattttc cccgattttc cgtatcagtg
      121 caaacttact gtctttgttg cgcgggcgcg caccctgcca gaccgtctgc cagccttgcg
      181 gcgcatccgc gttttggggc aggcggacga tacggtagcg gcaacggaca tcgccgacgc
      241 ggtgcggcaa tgtgccgtac tgcgtccaaa caatccgcgt gtgcaggtcg ccgccgccta
      301 tgccgataca ctcgatgccg tctgaaagct cccgttttaa ttccggggaa aacgatgcct
      361 ccatactccg gacgacgggc gcgtggcttt tcgccgcgtc cagccacggc aggaacagcg
      421 tcatcagcaa agcccaggtc agggtaacgc ctgccgccca gttggtaacc gcctgcctgc
      481 cgcgtatgtt tttccgggta atcgcccaca gccacaaggg tgtgaacagt acggcaaccg
      541 ccatcggaat gggatcgatg tcgggaacgt aatacgggct gaagtaggcg gcgcgttcgg
      601 caagcttggc gggccagccg taattcatgg cgaaaaagcc cgtccacagg aacacggcaa
      661 acagcccgaa cgccataatg ccgaaccagt tgacaaaagc cgccgcgccg cgcctcaggc
      721 tgtccagttg cgccgcgccg aacagggcaa gcggcggcag cagccagacg aggttgtctt
      781 gaaaacgctg cggattaaag gcgagcagca ccaaaacggc aagcatccag acaatgccca
      841 aaatccccca gtcggtcgaa aacaggcgtg tgcggcaaac cgtccaaacc gccagcggca
      901 gcgcgggcag tgcgaaccaa agcagatttt tcagatagta aaacaaactg aatgccgtct
      961 gaatgtgccg cacgccgccg aacgtaccga aaacgtgata gttgagccat tgcgcaaaca
     1021 gcgcgggctg cgtttttgcc aagagcagcg ggtaaacggt cataagcggc agggcaaagg
     1081 caagcgaggc gactgccgtc aacatcaaac gcctgctttg ccacggacgg aaaaacatca
     1141 gcacgggcag gggcagcatc agcgcaaacg ccgccggata agctgccgcc agcgacatca
     1201 acgtccaacc cgtaccgagc aggaaagagg cggcaatcac gcgccggcgt gccagcgagt
     1261 agccgtgcag caccagtccg gcggcggcaa aggcggcggc ggcgggattg aggaaatggg
     1321 caaccggaat cagcccgata cagccgatat ggattaaaac aacgctgcgc ccgtggtgtc
     1381 tgcccaaaaa gttgaaaccg gcaaagccgc aagaagtcag tccgataacg gcaaaaaata
     1441 cgcctgcaaa gcgtgcggca tcatacgggt cggctgccca cggcgacagc aaatgtttga
     1501 atgcggcggc aacccaaaga tacacgggcg gtatgccgaa atcggtttga ccgaacagat
     1561 gggcaaccaa gggggtgggg ctgcctgcca gtgcttcgac ggcggtatag acggcaggtt
     1621 cggcaggatt ccacaaatcg tgggaaaaca cgccgggcca cagccaggca aacgccatca
     1681 acagcagcag cca
//
LOCUS       DAWXHA010000173         1684 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.173, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000173 DAWXHA010000000
VERSION     DAWXHA010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.173"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            71..799
                     /locus_tag="AABD07_002042"
     CDS             71..799
                     /locus_tag="AABD07_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HFB2356492.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDELMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(858..1346)
                     /locus_tag="AABD07_002043"
     CDS             complement(858..1346)
                     /locus_tag="AABD07_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HFB2356493.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCAAVVLACKPKGRVGGLSGAVFISIPAVTGISVAAYQLWLQSLPPGAAPSCG
                     APWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
BASE COUNT          519 a          466 c          400 g          299 t
ORIGIN      
        1 tatgttaaaa tgccgaccgt aaaaaatctg acaaaaacag attaattatt tgaaataaga
       61 aaggaaattt atggcaggcc atagcaagtg ggcgaatatc cagcataaaa aagcccgtca
      121 ggatgccaaa cgcggcaaaa tcttcacccg tttaatcaaa gaaatcaccg ttgcggcgcg
      181 tatgggcggc ggcgatcccg gcgcaaatcc gcgcctgcgt ctggctttgg aaaaagcagc
      241 cgaaaacaat atgcccaaag acaatgtgca acgcgccatc gacaaaggta cgggtaactt
      301 ggaaggcgtg gaatacatcg agttgcgcta cgaaggctac ggcatcggcg gcgcagcttt
      361 gatggtggac tgcctgaccg acaacaaaac ccgcaccgtt gcggacgtac gccacgcatt
      421 taccaaaaac ggcggcaact tgggtaccga cggctgcgtg gcgttcaact tcgtgcatca
      481 gggctatttg gtattcgaac ccggcgttga cgaagacgag ctgatggaag cggctttgga
      541 agccggtgcg gaagacgtgg ttaccaacga cgacggttcc atcgaagtca ttaccgcgcc
      601 aaatgattgg gcgggcgtaa aatccgcttt ggaggcggca ggttacaaat ccgttgacgg
      661 cgacgttacg atgcgcgccc aaaacgaaac cgaactctcc ggcgacgatg ccgtcaaaat
      721 gcaaaaactg attgacgcgc tggaagactt ggacgacgtg caagacgttt acacttccgc
      781 cgtattgaat ctggactgat acgcagcaca gcagacatac aacaaaatgc cgtctgaacc
      841 tttcagacgg cattgattta tttagccctt gcccacgccc accaaaccgt caggacaacc
      901 gccaaaaaat acgccgcgct ccaaacaggc aaagcaaccc ctaacagata atccggttcg
      961 gcacaatttc cgaacccgcg cacaacaggc tcgaaccaat caaacaaagg ccagcccttc
     1021 aatcgaaacg tccacggcgc gccgcacgaa ggagccgcac ccggcggcag cgactgcaac
     1081 cacaactgat atgccgcaac agaaataccc gtaacggcgg gaatactgat aaacactgcg
     1141 cctgacagtc cgcccaccct gcccttgggc ttacacgcca gcacaactgc cgcacacaat
     1201 gcggttgcca aaacacataa ccgctgactg atgcacaaaa cgcaaggctc catacccaaa
     1261 acatactgtg ccgccaaaga accggcaaat gcacagaccg aaacggcaaa cagcagccaa
     1321 acggcttttc taaataacgg ggtcattttc tcaacacacc aatcaaaata ccgatatgcc
     1381 gattttgctg gatatatccc gagatggcaa gggacgaatc gacaccggca caggtgcgga
     1441 cgatttcggt tttcccgata tgcacaaaac ctgacaaagg acaaaacggc gatttgtccg
     1501 cacaatgccc gaaaaaatac atccggagga tttgaatttg aatttcggca aatttagcga
     1561 atcaaaagca acagccgata aaaaaatcaa aagtttattt caatgtttca acacacagga
     1621 cgacacataa agcaccgccc tatgtgccgt cctgatttgg aaggggttac acccctccca
     1681 aata
//
LOCUS       DAWXHA010000174         1680 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.174, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000174 DAWXHA010000000
VERSION     DAWXHA010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.174"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(54..242)
                     /locus_tag="AABD07_002044"
     CDS             complement(54..242)
                     /locus_tag="AABD07_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356494.1"
                     /translation="MADGRKGFFDAIIKINIFFFPVKTPTLGAANPIAGGSTRFRFGA
                     EQMAVLYVPFCVLKHIGR"
     gene            483..1517
                     /gene="purM"
                     /locus_tag="AABD07_002045"
     CDS             483..1517
                     /gene="purM"
                     /locus_tag="AABD07_002045"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HFB2356495.1"
                     /translation="MSTSLSYRDAGVGIDAGDQLVEKIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYQNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGLSVGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPKNTVAQIDAESWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVRSFLSGQGETVYRLGCIRER
                     QGNEHQTQVA"
BASE COUNT          435 a          399 c          437 g          409 t
ORIGIN      
        1 ggacaattcg gtggcacaaa atataagctg tctgcttttc agcgggcggc tttttatctg
       61 cctatgtgtt tcaacacaca aaacggcaca taaagcaccg ccatttgttc cgcaccgaat
      121 cggaagcggg tgcttccgcc cgcaatcgga ttcgccgccc ctaatgtcgg ggttttaacc
      181 ggaaagaaga aaatattgat tttgatgatg gcatcaaaaa aacccttccg cccgtctgcc
      241 aaaaggaatg gttaagaaaa gcaatgcgtc ttttgatgga acgcgatata taagaaattg
      301 aggggaaggg caggcgggtt tctgcccgtt aatcctgcgg acggccccgc caaacccgac
      361 acgcgcgggc atatggcgga ttgtttacaa tattgtctaa aaatctgaac ctgcaaacgc
      421 gaaataaggt agaatacgcc ccgttatttt accgtccaat ccccatttac caaggaaaaa
      481 cgatgagtac ttcattgagt taccgcgatg cgggcgtcgg tatcgacgca ggcgaccaac
      541 tggtcgaaaa aatcaaaccg tttgccaaac gcaccatgcg tccggaagta ttgggggatt
      601 tgggcggttt tggcgcattg gtcgaaatcg gcaaaaaata tcaaaacccc gtattggtca
      661 gcggtacgga cggcgtgggt accaagctca aacttgcctt cgattgggac aaacacgata
      721 cggtgggcat cgaccttgtt gcaatgagtg tcaacgatat tttggttcaa ggagctgaac
      781 cattgttttt cttggattat tttgcctgcg gtaaattgga tgttccgcgt gcgaccgatg
      841 tcatcaaagg cattgcccaa ggttgcgaag aatccggctg cgccctgatt ggcggggaaa
      901 ctgccgaaat gccgggtatg tatcccgttg gtgaatacga tttggcgggt tttgccgtcg
      961 gcgtggtgga aaaagagaat gtcattaccg gcctcagcgt cggcgcgggc gatgtggtat
     1021 tgggtttggc ttccaacggc gcacattcaa acggctattc ccttatccgt aaaatcatcg
     1081 aacgcgacaa tcccgatctg gatgccgagt ttgataatgg caaaacttta cgtgaagccg
     1141 ttattgcgcc gacacgtctg tatgtgaaac cgattcttgc cgctttggaa aaatttacca
     1201 ttaaaggtat ggcgcacatt accggcggcg gcattaccga aaacgtgccg cgcgtgttgc
     1261 ctaaaaacac ggttgcccaa atcgatgccg aatcgtggga attgcccaag ctcttccaat
     1321 ggcttcaaaa ggcgggcaat gtggaaaccc aagaaatgta ccggaccttt aactgcggca
     1381 tcggtatggt cgtcatcgtt gctgccgaag atgccgatgc ggttcggtca ttcctgagcg
     1441 ggcagggcga gacagtgtac cgtttgggtt gcatccgaga gcgtcaaggg aacgagcatc
     1501 aaacccaagt tgcctgactt ccaagcatca aatgccgtct gaatttgttt cagacggcat
     1561 ttccgcatct tccaaacgcg tatccgcaac acagttctgc aaactgatat tttgcccggt
     1621 atggcggctt aaacttcttc atcatatttc gataatgcta taaaatgata taatcataaa
//
LOCUS       DAWXHA010000175         1674 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.175, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000175 DAWXHA010000000
VERSION     DAWXHA010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.175"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            250..954
                     /locus_tag="AABD07_002046"
     CDS             250..954
                     /locus_tag="AABD07_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pretoxin"
                     /protein_id="HFB2356496.1"
                     /translation="MVKTADGYKAIARIRAGESVLSKDEASGVTGYKPVTARYGNPYR
                     ETVYIEVSDGIGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWRTYFVKGNQAETEGVWVHNDCPYGNLSDNKSVGEGKKFTPAQK
                     KAIIQENMNRNGGVVKSDQSGEVLVRPKKSQKGITPPSNEWQIDHVQAKSKGGSNSYK
                     NAQVLSRRENIKKSNK"
     gene            963..1235
                     /locus_tag="AABD07_002047"
     CDS             963..1235
                     /locus_tag="AABD07_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356497.1"
                     /translation="MQWKFEDPQNTAVITTRRILSKKNGILEVWHDADDGMWQFLDGN
                     EIDEGDAVIVSLKEIVTIDSSVNLLSNLPLGGYAWRNTISEKWNFD"
     gene            1402..1632
                     /locus_tag="AABD07_002048"
     CDS             1402..1632
                     /locus_tag="AABD07_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFB2356498.1"
                     /translation="METLDERIKNLGKSLEDRIDANLIDATLEYITFSERLLAFETLC
                     DYIEDFNIQLTEKESQEISFINKEFGIESTSD"
BASE COUNT          598 a          312 c          336 g          428 t
ORIGIN      
        1 taaataatgg aaatttgata caaacgacta attaaatgga caaatataag ttagattgga
       61 cacccaaacc taaaaactgt ctgaaactca atttggtttt cagtaagcgt aggttggctt
      121 aaaaacccaa ccaccaaaat gccgtctgaa gcggtattca gctttcagac ggcattttga
      181 tgaatgaaac aggatattga gaactaagtt ctttaaaaat cctacacctg ccctttccac
      241 ggcagcacct tggtcaaaac ggcagacggc tacaaagcca ttgcccgtat ccgagccggc
      301 gagagcgtcc tctccaagga cgaggcaagc ggggtaacgg gatacaaacc cgttaccgcc
      361 cgatacggta atccgtatcg ggaaaccgtt tacattgaag tttcagacgg catcggcaac
      421 agccaaaccc tgatttccaa ccgcatccat ccgttttaca gtcaaggaaa atggatacag
      481 gcaggtcgtc tgaaaaaagg cgacaccctg ctttccgaaa gcggtgcaaa acagacggtt
      541 caaaacatta ccctcaaaca gcagccgctc aaagcctaca atctgaccgt tgccgactgg
      601 cgtacttact ttgtcaaggg caatcaggcg gaaacggaag gagtttgggt tcataatgat
      661 tgtccgtatg gaaatttatc ggataataaa tctgttggcg aaggaaaaaa atttacacca
      721 gctcaaaaga aagcaatcat ccaagaaaac atgaatagaa acggaggggt agtgaagtct
      781 gaccaatctg gagaagtttt ggttcgtcct aaaaagagcc aaaaaggtat caccccccca
      841 tcaaatgaat ggcagattga ccatgtgcaa gcaaaaagta aaggaggttc aaatagttat
      901 aaaaatgcac aggttttatc cagaagagaa aatattaaga aatcaaataa ataggtatca
      961 atatgcaatg gaaatttgaa gatcctcaaa atactgctgt tattaccacc agaagaattt
     1021 tgtctaaaaa aaacggaatc ttagaagtat ggcatgatgc tgatgatgga atgtggcaat
     1081 tcttagatgg caatgaaatt gatgaaggag atgctgtgat agttagttta aaagaaattg
     1141 tcactattga ttcctcagtc aatctcttaa gtaatttacc tcttggtggt tacgcttgga
     1201 gaaatactat atcggaaaaa tggaattttg attagcaagc gtaggttagg ttaaaaaaac
     1261 caacaatcaa aggtcgtctg aaacagtgtt tagtttttca aacgaccttt tcttcaatta
     1321 acatagaatg ttgggtctcg acccaaccta cacgcttact aatctcaaat ataaccttat
     1381 gaaataatga gtatttaaaa gatggaaaca ttagacgaac gaataaagaa tttaggaaaa
     1441 tctcttgaag atagaattga cgctaatcta attgatgcca cactagagta cattactttt
     1501 tcagaacgtt tgctagcttt tgaaacgcta tgtgattata ttgaagattt caatatccag
     1561 cttacggaaa aagaatccca agaaatctct tttattaata aggaatttgg aattgaaagt
     1621 acatcagatt aataaatatt aggtcggttt aaaaacccaa caatcacaag gtct
//
LOCUS       DAWXHA010000176         1656 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.176, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000176 DAWXHA010000000
VERSION     DAWXHA010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.176"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..684
                     /gene="mafA"
                     /locus_tag="AABD07_002049"
     CDS             <1..684
                     /gene="mafA"
                     /locus_tag="AABD07_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFB2356499.1"
                     /translation="GYHNNPDSATRYSYPAYDTTATTKSDALSGVTTSTSVLNAPAAA
                     LTKNNGRKGERSAGLSVNGTGDYRNETLLANPRDVSFLTNLIQTVFYLRGIEVVPPEY
                     ADTDVFVTVDVFGTVRSRTELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTAAYES
                     QYQEQYALWMGPYSVGKTVKASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNPDVGN
                     EVIRRRKGG"
     gene            688..>1656
                     /gene="mafB"
                     /locus_tag="AABD07_002050"
     CDS             688..>1656
                     /gene="mafB"
                     /locus_tag="AABD07_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFB2356500.1"
                     /translation="MKPLRRLTNLLAACAVAAAALIQPALAADLAQDPFITDNTQRQH
                     YEPGGKYHLFGDPRGSVSDRTGKINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASEEKGNVDDGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANRKMFEHNAKL
                     DRRGNSMEFVNGVAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AAIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEALVNVLPFAKVK"
BASE COUNT          442 a          609 c          375 g          230 t
ORIGIN      
        1 ggctaccaca acaaccccga cagcgccacc cgatacagct accccgccta tgacactacc
       61 gccaccacca aatccgacgc gctctccggc gtaaccactt ccacatcggt cttaaacgcc
      121 cccgccgccg ccctgacgaa aaacaacgga cgcaaaggcg aacgctccgc cggactgtcc
      181 gtcaacggca cgggcgacta ccgcaacgaa accctgctcg ccaacccccg cgacgtttcc
      241 ttcctgacca acctcatcca aaccgtcttc tacctgcgcg gcatcgaagt cgtaccgccc
      301 gaatacgccg acaccgacgt attcgtaacc gtcgacgtat tcggcaccgt ccgcagccgt
      361 accgaactgc acctctacaa cgccgaaacc cttaaagccc aaaccaagct cgaatatttc
      421 gccgtcgacc gcgacagccg gaaactgctg attgccccta aaaccgccgc ctacgaatcc
      481 caataccaag aacaatacgc cctctggatg ggaccttaca gcgtcggcaa aaccgtcaaa
      541 gcctcagacc gcctgatggt cgatttctcc gacatcaccc cctacggcga cacaaccgcc
      601 caaaaccgtc ccgacttcaa acaaaacaac ggtaaaaacc ccgatgtcgg caacgaagtc
      661 atccgccgcc gcaaaggagg ataaaccgtg aaaccgctgc gcagactgac aaacctcctt
      721 gccgcctgtg ccgtagcggc ggccgcactc atacagcccg ccctcgcggc ggacttggcg
      781 caagacccgt tcattaccga taacacccaa cggcagcact acgaacccgg cggcaaatac
      841 cacctcttcg gcgacccgcg cggcagcgtt tccgaccgca ccggcaaaat caacgtcatc
      901 caagactata cccaccagat gggcaacctg cttatccaac aggcaaacat caacggcaca
      961 atcggctacc acacccgctt ttccggacac ggacacgaag aacacgcccc cttcgacaac
     1021 cacgccgccg acagcgcaag cgaagaaaaa ggcaacgttg acgacggctt taccgtgtac
     1081 cggctcaact gggaaggaca cgaacatcat cccgccgatg cctacgacgg cccgaagggc
     1141 ggcaattacc ccaaacctac gggcgcacga gacgaataca cctatcacgt caacggcaca
     1201 gcccgcagta tcaaactcaa tccgaccgac acccgcagca tccggcaacg catatccgac
     1261 aactacaaca acctcggcag caatttctcc gaccgcgccg atgaagccaa cagaaaaatg
     1321 ttcgagcaca atgccaagct cgaccgccgg ggcaacagca tggagtttgt caacggcgtc
     1381 gccgccggcg cgctcaaccc ctttatcagc gcgggcgaag ccttgggcat aggcgacata
     1441 ctgtacggaa cgcgctatgc catagacaaa gccgcaatgc gcaacatcgc ccccttaccc
     1501 gccgagggca aattcgccgc catcggcggc ttgggcagcg tggcgggctt tgaaaaaaat
     1561 acgcgcgaag ccgttgaccg gtggatacag gaaaacccca atgccgccga aaccgtcgaa
     1621 gccctggtca acgtcctgcc gtttgccaaa gtcaaa
//
LOCUS       DAWXHA010000177         1643 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.177, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000177 DAWXHA010000000
VERSION     DAWXHA010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.177"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(93..>1643)
                     /locus_tag="AABD07_002051"
     CDS             complement(93..>1643)
                     /locus_tag="AABD07_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilC"
                     /protein_id="HFB2356501.1"
                     /translation="TSANDGMVHLFKRNGTDQRGYELKLSYIPGTMERKDIEGNDSDL
                     AKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDKQKHFFMFGAMGLGGRGAYALDLSK
                     INENYPAAAPLFDVKNGDKNGKNGKNRVEVELGYTVGTPQIGKTRSGKYAAFLASGYA
                     AKDIGSGDNKTALYVYDLNNTLGTPIAKIEVKDGKGGLSSPTLVDKDLDGTVDIAYAG
                     DRGGNMYRFDLSDSNPSKWSVSTIFEGQRPITSAPAVSRLADKRVVIFGTGSDLSESD
                     VFNTDEQYIYGIFDDDKANVSVKVKDHMGDGLLKQNLTQENKTLFLTNNKASGGSADK
                     GWVVKLREGERVTVKPTVVLRTAFVTIRSYTGNDKCGAQTAILGINTADGGALTPRSA
                     RPIVPEANTAVAQYSGHKKTAGGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKK
                     TDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKR
                     LSWREVFF"
BASE COUNT          337 a          452 c          412 g          442 t
ORIGIN      
        1 ttcatttgcc gccccctccc gaaaaacgca aaaaaatgcc gtccgaagac ctttcggacg
       61 gcatttgcgg aaaaaccggc cgcgcaggcg ggtcagaaga agacttcgcg ccagcttaag
      121 cgtttgatac cgcacatcgg gccggtaata tccaagctgt ccaaatcgtt catcagcagg
      181 gtgcgcacac cttttccgga gaagcaccgg ttattgcggg cgggtttttt accctctttg
      241 aatgttccgc tgccgcctgc atcaccgtct gccgtgacgg ggaaatcgtc tgttttcttt
      301 tcgtccaggt agcgcacatt aaccggcttg tcgtaaacat atccgttcgg gcagacggtt
      361 ttaccgcctt tttccataca acctataggg atggacttgc cgccggcggt tttcttatgg
      421 ccggaatatt gtgcgacagc cgtattggct tccggcacaa tcgggcgcgc gcttctcgga
      481 gtcaatgcgc cgccgtcggc ggtattgatg cccaaaatgg cggtttgcgc gccgcatttg
      541 tcattacccg tatagctgcg gatggtgaca aaggcggtac gcaataccac ggtcggtttg
      601 acggtaacgc gttctccttc cctcaatttc actacccagc ctttatcggc cgatccgccg
      661 gatgccttat tatttgtcag gaacaaggtt ttattttcct gcgtaaggtt ttgcttgagc
      721 agcccgtcgc ccatgtggtc ttttaccttt acactaacat tcgccttatc gtcgtcaaag
      781 ataccgtaaa tatattgttc gtccgtattg aatacgtcac tttcactcaa atcgctgccc
      841 gtaccgaaga taacgacgcg tttgtctgcc agtcgggaaa cggcgggcgc ggaggtaatc
      901 ggcctctggc cttcgaaaat agtgcttaca gaccatttac taggattgga atcgctcaaa
      961 tcaaagcggt acatattccc gccccggtcg ccggcatagg cgatatcgac tgtgccgtcc
     1021 aaatctttat ccaccagcgt gggggacgaa agcccgcctt tgccgtcctt cacttcgatt
     1081 tttgcaatcg gcgtacctaa ggtgttgttc aaatcatata catacagcgc ggttttatta
     1141 tcgccgctgc caatatcttt agccgcataa ccggaagcga ggaaggcggc gtatttgccg
     1201 ctgcgggttt tgccgatttg cggcgtaccg acggtgtagc ctaattccac ttccacgcga
     1261 tttttgccgt ttttgccgtt tttatcgcca tttttgacat caaacagggg agcggcggct
     1321 ggataatttt cgttgatttt gcttaaatcc aaggcatacg cgcctctgcc gccaaggccc
     1381 atcgcaccaa acataaagaa atgtttttgc ttgtcttggt catctgtaat gcggcgcaag
     1441 acaaagccgc cgtccacgcc gtagcggtcg cccacatagc ctttttcggc aaaggtgcgc
     1501 agctctttgg cgaggtcgga gtcattgcct tcaatatcct tacgctccat cgtaccgggg
     1561 atgtagctga gcttcagttc gtagcctcgt tggtctgtgc cgtttctttt aaacaggtgc
     1621 accatcccgt cgttggcaga agt
//
LOCUS       DAWXHA010000178         1614 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.178, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000178 DAWXHA010000000
VERSION     DAWXHA010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.178"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            231..1076
                     /gene="mafB"
                     /locus_tag="AABD07_002052"
                     /pseudo
     CDS             231..1076
                     /gene="mafB"
                     /locus_tag="AABD07_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            1086..1292
                     /locus_tag="AABD07_002053"
     CDS             1086..1292
                     /locus_tag="AABD07_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356502.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
BASE COUNT          540 a          306 c          355 g          413 t
ORIGIN      
        1 aggagaaatt tattcaggcg tatgcgtgga ttgtagagat tttgagataa ttcatggtgt
       61 tgaaaaaaat aaagttcttc ttttggataa agaacttaaa aaaatatatg atacttggga
      121 taaatgttag ctagataggg tgggcactcg ttgcccacct tttgccgtat attaaaaatc
      181 cttttcaggc tgcctgaaac tgggtgggca tcaatgccaa tcctaactgt gcggatgaag
      241 caggaaaact gatatgggaa aacgaccccg ataaaaattg gcgggctaac cgtatggacg
      301 atattcgcgg catcgtccaa ggtgcggtta atcctttttt aacgggtttt cagggattgg
      361 gagttggggc aattacagac agtgcggtaa acccggtaac ctatgcggca gcacggaaaa
      421 ctttacaggg tattcacaat ttaggaaatt taagtccgga agcacaactt gccgccgcga
      481 gcctattaca ggacagtgcc tttgcggtaa aagacggcat caattccgcc agacaatggg
      541 ctgatgccca tccgaatata acagcaacag cccaaactgc ccttgccgta gcagaggccg
      601 cagctacggt ttggagaggt aaaaaagtaa aacttaaccc gaccaaatgg gattgggtta
      661 aaaataccgg ctataaaaca cctgctgttc gcaccatgca tactttggat ggggaaatgg
      721 ccggtgggaa tagaccgcct aaatctataa cgtccaacag caaagcagat gcttccacac
      781 aaccgtcttt acaagcgcaa ctaattggag aacaaattag tagtgggcat gcttataaca
      841 agcatgtcat aagacaacaa gaatttacgg atttaaatat caattcacca gcagattttg
      901 ctcggcatat tgaaaatatt gttagccatc caacaaatat gaaagagtta cctcgcggta
      961 gaactgcgta ttgggatgat aaaacaggga caatagttat ccgagataaa aattctgacg
     1021 atggaggtac agcatttaga ccaacatcag gtaaaaaata ttatgatgat ttataggaaa
     1081 aagccatgaa tatactatcc ataaataatc aaaactcaac tatttcacta actcaagatg
     1141 aagtttttgt tttacgagct atcttgaatg agatatatgc gggcgtatgt gtagattcaa
     1201 gagaatttga aaatgtatct ggtgttagaa aacatgaagt agataattta caacaacagt
     1261 ttgctggaat ttataaaaaa atgacaactt aacaacccaa atttttgtca gagcctagtg
     1321 caaattacaa ctatgattct attgtagccg aaatgaaaga aaaaaatcat gggttggcga
     1381 cagggttgat gttgttaata tgcctgatgg agcacccact agcagccgta gatcggattc
     1441 tcgaatccga cattttccaa cagcggcatc tcggaaacga taggcgcgtc aaatattttt
     1501 gtcggataca aataaatatc cgacctacat ttctgcgcag caaactttac agggtattca
     1561 cgatttagga aatttaagtc ccgcagcaca acttgcggct gcaaccgcat taca
//
LOCUS       DAWXHA010000179         1584 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.179, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000179 DAWXHA010000000
VERSION     DAWXHA010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.179"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            240..605
                     /locus_tag="AABD07_002054"
     CDS             240..605
                     /locus_tag="AABD07_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356503.1"
                     /translation="MAEGQKSAVTEYYLNHGEWPENNTSAGVASSPTDIKGKYVKSVT
                     VAKGVVTAQMASTGVNKEIQGKKLSLWGRRENGSVKWFCGQPVTRTDKANDDVTDDAT
                     AGNNKIDTKHLPSTCRDLP"
     gene            642..1073
                     /locus_tag="AABD07_002055"
     CDS             642..1073
                     /locus_tag="AABD07_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356504.1"
                     /translation="MSNKSALTGHYPNNGEWPKDNDSAGVASASKIIGKYVKEVKVEK
                     GVVTAEMKSDGVNNEIQGKKLSLWAKREDGSVKWFCGQPVTRTGNADDVAKDDGKDKI
                     ETKHLPSTCRDESSLPGIARITANGPPTTVMPAWHPPPTKS"
     gene            983..1339
                     /locus_tag="AABD07_002056"
     CDS             983..1339
                     /locus_tag="AABD07_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356505.1"
                     /translation="MIVAGYCPNHGEWPADNGDAGVASPADKIIGKYVEKVEVAKGVV
                     TATMKSDGVNKEIQGKRLSLWAKREDGSVKWFCGQPVQRDDGKADNDAVADDKNNNGI
                     DTKHLPSTCRDKHSDT"
BASE COUNT          472 a          451 c          381 g          280 t
ORIGIN      
        1 gcgcgggaat gacggcggag cggtttctgt tgctcccgat aaattcctaa aactcaaaat
       61 ttcatcattc ccacaagatt cccacaagga cagaaaacca aaaacagaaa cctaaaattc
      121 gtcattcccg caaaagcggg aatctaggac gtaaaatcta aagaaaccgt tttcccgata
      181 agtttccgtg ccgacagacc cggattcccg cccgcgcgca agtttccgaa gccatccttt
      241 tggccgaagg tcaaaaatca gccgttaccg agtattacct gaatcacggc gaatggccgg
      301 aaaacaacac ttctgccggc gtggcatcct cccccaccga catcaaaggc aaatatgtta
      361 aaagcgttac ggtcgcaaaa ggcgtcgtta ccgcccaaat ggcttcaacc ggcgtaaaca
      421 aagaaatcca aggcaaaaaa ctctccctgt ggggcaggcg tgaaaacggt tcggtaaaat
      481 ggttctgcgg acagccggtt acgcgcaccg acaaagccaa cgacgacgtt accgacgacg
      541 ccaccgccgg caacaacaaa atcgacacca agcacctgcc gtcaacctgc cgtgacctgc
      601 cgtgatacgt catctgccaa ataaggcaaa ttaggcctta aatttcaaat aaatcagccc
      661 tcaccgggca ttacccgaat aacggcgaat ggcccaaaga caacgactct gccggcgtgg
      721 catccgcttc aaaaatcata ggcaaatatg ttaaggaagt taaagtcgaa aaaggcgtcg
      781 ttaccgccga aatgaaatca gacggcgtaa acaatgaaat ccaaggcaaa aaactctccc
      841 tgtgggccaa gcgtgaagac ggttcggtaa aatggttctg cggacagccg gttacgcgca
      901 ccggcaacgc cgacgacgtc gccaaagacg acggcaaaga caaaatcgaa accaagcacc
      961 tgccgtcaac ctgccgcgat gaatcatcgt tgccgggtat tgcccgaatc acggcgaatg
     1021 gcccgccgac aacggtgatg ccggcgtggc atcccccgcc gacaaaatca taggcaaata
     1081 tgttgagaaa gttgaagtcg caaaaggcgt cgttaccgcc acaatgaaat cagacggcgt
     1141 aaacaaagaa atccaaggca aaagactctc cctgtgggcc aagcgtgaag acggttcggt
     1201 aaaatggttc tgcggacagc cggttcagcg cgacgacggc aaagccgaca acgacgccgt
     1261 tgccgacgac aaaaacaaca acggcatcga caccaagcac ctgccgtcaa cctgccgcga
     1321 taaacactct gacacctaag gcaaattagg ccttaaattt caaataaatc aagcggtaag
     1381 tgattttcca cggccgcccg gatcaacccg ggcggcttgt cttttaaggg tttgcaaggc
     1441 gggcggggtc gtccgttccg gtggaaataa tatatcgatt gcgcttcaag gccctgcatg
     1501 tgcctcattg ccacccgttt aaacacggtt tttatctgac aggcgcgcaa cccgcccccc
     1561 catttgccga acaagcggtc cgga
//
LOCUS       DAWXHA010000180         1576 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.180, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000180 DAWXHA010000000
VERSION     DAWXHA010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.180"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..151)
                     /locus_tag="AABD07_002057"
     CDS             complement(<1..151)
                     /locus_tag="AABD07_002057"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356506.1"
                     /translation="MCKLSGIGRLSAPSAYRADIFEKYLPCRFRRHQSNTLHQNTLPI
                     TDRLSK"
     gene            216..755
                     /locus_tag="AABD07_002058"
     CDS             216..755
                     /locus_tag="AABD07_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HFB2356507.1"
                     /translation="MLNAYDVADFFLSPFEEEDGEQISNLKLQKLLYYAQGYALAILN
                     RPLFAENIEHWQHGPVVPCIYRTYKKYGGSPLPAAHIEPDKYADEELVVLNRVRKEQG
                     CYTAWALRNKTHQEAPWIQTRQGEVIGIALMGEYFRHALPQTDYNFNLEKLKTAVEDS
                     FVSVPHFNGVDDLEKWLEQ"
     gene            756..1115
                     /locus_tag="AABD07_002059"
     CDS             756..1115
                     /locus_tag="AABD07_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356508.1"
                     /translation="MQVLLGEDFKRALKNYPKEDRRKIAEFIAHVQQNGLSGLPGRNK
                     SSDNVPADDPQWLEKVRFAQRHNLWHYHIGIPKYNGGRHGDLTSAYILHYTLCDGFIK
                     IIGFDRHPPFILPDIPK"
     gene            complement(1132..1350)
                     /locus_tag="AABD07_002060"
     CDS             complement(1132..1350)
                     /locus_tag="AABD07_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356509.1"
                     /translation="MANSNSGHSKKLRAATAAAATKAKLASGEYRQFSVQGRAEDVEL
                     ILAAVEKAGGSRVQALAKICRRYLEGLS"
BASE COUNT          412 a          429 c          361 g          374 t
ORIGIN      
        1 ctttggacag cctgtccgtt atcggcaggg tattttggtg gagcgtgttg gattgatgcc
       61 gtctgaaacg gcagggcaag tatttttcaa atatatccgc ccgatatgcc gacggcgcgg
      121 acagcctgcc gataccggat aatttgcaca aattatttct tgaaataatg ggccggcggc
      181 cttaatatac agaaaaataa caacggaaac agaaaatgct gaacgcgtac gacgtggcag
      241 atttcttcct ttcccctttt gaagaagagg acggggagca aatctccaat ctcaaacttc
      301 aaaaactcct gtattacgca caaggctacg cccttgccat acttaaccgc cccctgtttg
      361 ccgaaaatat cgaacactgg cagcacggtc cggtagtccc ctgcatttac cgcacctaca
      421 aaaaatacgg cggcagccca ttgcctgcgg cccatatcga accggacaaa tatgcggacg
      481 aagagttggt tgtcctcaac cgtgtccgta aagagcaggg ctgctacacc gcttgggcat
      541 tacgcaataa aacccatcag gaagcgccgt ggatacagac ccggcagggc gaagtcatag
      601 ggattgcgct gatgggggaa tatttccgcc atgcgctgcc gcagacggat tacaatttca
      661 atcttgaaaa actcaaaaca gccgttgaag acagctttgt cagcgtcccg catttcaacg
      721 gcgtcgacga cttggaaaaa tggttggagc agtaaatgca ggtgctgctt ggcgaagact
      781 tcaaaagagc gttgaaaaac taccccaaag aagaccgcag aaaaattgcg gaatttatcg
      841 cacacgtcca acagaacggc ttatcagggt tacccggcag gaacaaatcc agcgacaacg
      901 taccggcaga cgatcctcaa tggctggaaa aagtccgatt tgcccaacgg cacaaccttt
      961 ggcactatca catcggcatt cccaaataca acggcggcag gcatggcgat ttgacatccg
     1021 cctacatcct tcactatacc ctttgcgacg gctttatcaa aatcatcggt tttgacagac
     1081 acccgccttt tatcctgccc gatattccca aataaccttg tcttaccccc cttaagacag
     1141 cccctcgaga taccgcctgc aaatctttgc caaagcctgt acgcggctgc ccccggcttt
     1201 ttccacggcg gcaaggataa gctccacgtc ttcggcacgc ccctgcactg aaaactgccg
     1261 gtattcgccg cttgccagtt ttgcctttgt cgccgccgcc gccgttgccg cgcgcaattt
     1321 tttagaatgc ccgctgttgg aatttgccat ttttaaatcc ttatagtaga gtatgggaaa
     1381 gataagagga agggcagcct ccttaactgc cctgcaaatg gttaatcgtt aatcacttgt
     1441 tttgtatttc cctaccacgc tggggagctt gcaaggaaat acaaaatcac acagattagg
     1501 attttcttaa tcacattgcc tcctttctct ttcaggttgc cccgtatcgg ctgatacggg
     1561 gtttcttcat ttccta
//
LOCUS       DAWXHA010000181         1503 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.181, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000181 DAWXHA010000000
VERSION     DAWXHA010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.181"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            34..1296
                     /locus_tag="AABD07_002061"
     CDS             34..1296
                     /locus_tag="AABD07_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356510.1"
                     /translation="MKQKKTVQCILLGFAAASMHAQGAAAANSGTIEKTDKYTLVLAK
                     QGQENNYTLNGGTEVKPLNSLIIAANGGTNNITIKGKLADSPADAPPTIDNNSIERNI
                     NKNGYTYAWQNWSGAVMLVDQSYEGENKVTFENVTIAAHNAPAGILSDDRHKSSSLAP
                     AMLAFKGRNTINMDADSNANSSNEGILLLNNGEKMGEYRLVSEEGSTLNINIKSGKDK
                     GQGITANHYGNSDINFNKASPNITTMEFKGDVNIKIDRNGQEEAESNGFGFYSSRKLG
                     NKKQIPEGSKMEAIFRGNVDIVATPVYDEQGRPKSIGSAFAIDGKYSKVEVVGGEGKV
                     VKIKGDIFAYNGGSVSVNLANKDSYFEGEAHIGKRSFAKGKDMFALTVDADGYELTPD
                     TKSIEKKKLNVRGCTRLSLNSTPIPQDF"
     gene            complement(1264..>1503)
                     /locus_tag="AABD07_002062"
     CDS             complement(1264..>1503)
                     /locus_tag="AABD07_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFB2356511.1"
                     /translation="KSDAGGFTRCRINRSKEFADRRNHINGIGSFWNQAKRALRKYNG
                     IDRKPFPPLLRECEFRFNSGTPSRQLKILRDRCGI"
BASE COUNT          473 a          338 c          376 g          316 t
ORIGIN      
        1 taaaaatcac ataccttcaa aatggaaaaa ccgatgaaac aaaagaagac agttcagtgc
       61 atcttacttg gcttcgcggc cgcttctatg cacgcgcaag gggcggccgc tgcaaacagt
      121 ggaacgatag agaagacaga caaatacacc ctcgtcctcg caaaacaagg gcaagagaac
      181 aactataccc ttaatggcgg aaccgaagtc aaacccttaa attccctcat cattgccgcc
      241 aacggcggta cgaacaacat tacgataaaa ggcaaattgg cagacagtcc tgccgatgcc
      301 ccgccgacga ttgacaataa ctcgattgaa agaaatataa ataaaaacgg ttacacgtac
      361 gcatggcaga attggagcgg cgcggtgatg ttggtggatc aaagctatga gggagaaaat
      421 aaggttactt ttgaaaacgt aaccatagcc gcccataacg cgcctgccgg cattttgtct
      481 gatgataggc ataaatccag tagcttggcg ccggcgatgc ttgcctttaa agggcgcaat
      541 accatcaata tggacgcgga ctcaaatgcc aactctagta acgaaggtat cctattgctt
      601 aataatggtg aaaaaatggg agaatatcgt cttgtttccg aagaaggctc gacgctgaat
      661 atcaacatca aatcaggaaa agataaagga cagggcatta ccgccaacca ctatggtaac
      721 tcagacatca acttcaacaa ggcttctcca aacatcacca caatggagtt caagggcgat
      781 gtaaacatta aaatcgatag gaacggacag gaagaggcgg aaagcaacgg ttttggcttc
      841 tattcaagcc gcaaattagg caataagaag cagattccgg aaggttctaa gatggaagcg
      901 attttccgtg ggaacgtcga tatcgttgca acgccggttt atgacgagca aggcaggccc
      961 aaaagcatag gcagcgcgtt tgcgattgac gggaaataca gcaaagtcga ggtagtcggc
     1021 ggggaaggca aggttgtcaa aatcaaaggc gatattttcg cctacaacgg cggcagcgtg
     1081 agcgtgaacc ttgccaacaa agactcttat tttgaagggg aagcccatat cgggaaaagg
     1141 agctttgcca aagggaaaga tatgtttgcc ttaaccgtgg atgcggacgg atatgaatta
     1201 acccccgata caaagtcgat tgaaaagaaa aagctgaatg ttaggggctg tactagatta
     1261 tccctaaatt ccacaccgat cccgcaggat ttttagctgc cgggacggtg tgccggagtt
     1321 aaatcgaaat tcgcattccc tcaacaacgg cgggaaaggt ttacgatcga ttccgttgta
     1381 tttccgcaag gcgcgttttg cctgattcca aaagctccca atgccgttaa tgtggttccg
     1441 acggtctgca aattccttgg aacggttgat gcggcaacgg gtaaaaccgc ccgcgtccga
     1501 ctt
//
LOCUS       DAWXHA010000182         1462 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.182, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000182 DAWXHA010000000
VERSION     DAWXHA010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.182"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..>1462
                     /locus_tag="AABD07_002063"
     CDS             <1..>1462
                     /locus_tag="AABD07_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HFB2356512.1"
                     /translation="NERKQPEVKWEGQYNQSALKDKSRERTFSHTSQRNSLGRTSNFI
                     SFNNNDTLVSQQSGTAVFGTATYLPPYGKVSGFDTAELNKRGNAVNWIRTTRAGLAGY
                     AYTGIHCGHARDCPKLTYKTQFSFDNPDLAKTGDRLDRHTEPSRDNSPIYKLKDYPWL
                     GVSFNLGAEGTAKDGRSSSRLISSFNEKNSNNNLVYTTEGRDISLGNWQSESTAVAYY
                     LNAKLHLLDKKEIKDITGKTVRLGVLKPSIDVKTQNTGFAGLLNFWSKWDIKDNGQIP
                     VKLGLPEVKAGRCTNKPNPNPKSKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPGS
                     SSSRIFLQELKTQTDPGRPGRYSLAALNAQDIKSREPNFNSRQTVIRLPGGVYRIAPT
                     RDRIVGLNGNDGKNDTFGIYKERLVTPDADEWAKVLLPWTVRYYGNDDIFKTFNQPNS
                     KTQNGKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPIT"
BASE COUNT          422 a          402 c          355 g          283 t
ORIGIN      
        1 tgaacgagcg aaagcagccc gaggtaaagt gggagggtca atataatcaa tcagcattaa
       61 aggacaaaag cagggagcgg acatttagcc atacgagcca gagaaacagc ctcggcagga
      121 caagcaattt tatctcattc aacaataacg atacccttgt ttctcaacaa agcggtactg
      181 ccgtttttgg cacagccacc tacctgccgc cctacggcaa ggtttccggc tttgataccg
      241 ccgagctgaa caagcgcggc aatgccgtca attggattcg taccacccgg gccgggctgg
      301 caggctacgc ctacaccggt atccattgcg gacatgcccg agactgtccc aaacttacct
      361 ataaaaccca attttccttc gataatcccg acttggcaaa aacaggagac aggctggata
      421 ggcacacaga gccaagccgc gacaattcgc ccatttacaa attgaaggat tatccatggt
      481 tgggcgtgtc tttcaatttg ggcgccgagg gtaccgccaa agatggcaga tcatccagca
      541 gattgatatc ttcttttaat gaaaagaata gtaataacaa cctcgtctat accacggaag
      601 gccgcgatat ttccttgggc aactggcaga gcgaaagtac cgccgtggcc tattatctga
      661 acgccaagct gcacctgctg gacaaaaaag agattaaaga tatcaccggc aaaacagtgc
      721 ggttgggtgt cttgaagccg agcatcgatg tgaagacaca aaatacgggg tttgccggct
      781 tgctaaattt ttggtctaag tgggacatta aagataacgg gcagattccg gtcaagctcg
      841 gcctgccgga agtcaaagcc gggcgctgca ccaacaaacc gaaccccaat cccaaatcca
      901 aagccccttc gccggcactg accgcccccg cgctgtggtt cggccctgtg caaaatggca
      961 aggtgcagat gtattccgct tcggtttcta cctaccccgg cagttcgagc agccgcatct
     1021 tcctccaaga gctgaaaact caaaccgacc ccggcaggcc cggccggtat tccctcgccg
     1081 ctttgaatgc gcaggatatc aaatcccgcg agccgaattt caactcaagg cagaccgtca
     1141 tccgattgcc gggcggcgtg taccggatcg ccccgactcg cgacaggatc gtgggtttga
     1201 atggcaatga cggcaaaaac gacactttcg gcatctacaa ggaaaggtta gtcacacctg
     1261 atgccgacga gtgggcaaaa gtgctgctgc cttggacggt ccggtattac ggtaatgacg
     1321 atatatttaa aacattcaac caaccaaaca gcaaaacaca aaacggcaaa aaacaataca
     1381 gccaaaaata ccgcatccgc acaaaagaag atgacaatga caaaccccgc gatttgggcg
     1441 acatcgtcaa cagcccgata ac
//
LOCUS       DAWXHA010000183         1418 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.183, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000183 DAWXHA010000000
VERSION     DAWXHA010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.183"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            34..>1418
                     /locus_tag="AABD07_002064"
     CDS             34..>1418
                     /locus_tag="AABD07_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HFB2356513.1"
                     /translation="MPSSIKDKDRKRTFSHTSQTNWRGQQNNFISFDNSDELVSQQSG
                     TAVFGTATYLPPYGKVSGFDTDRLKKRNNAVDWIRTTRIALAGYSYEGVVCRSGTGCP
                     KLVYKTRFSFDNPDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLSSENTVKD
                     SKLSNKLISSFSESNNNQTIVSTTEDHPISLGGSQREHTAVAYYLNAKLHLLDKKGIG
                     DIAPGKTVRLGLLKPSIDVRKGNTGLSGILSFNATWDIKDTGQIPVKLGLQVKAGRCI
                     NKPNPNKNTKAPSPALTAPALWFGPRQDGKVQMYSASVSTYPDSSSSKIFLQNLSRND
                     DKNKPGRYSLKPLSENEIKSKEPRFNGRQTVIRLDSGVQLIKLNGSKDEVVIFGNNGN
                     NGTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKFKLINQKPDRYSQRYRIRENGN
                     RDLGDIVNSPIV"
BASE COUNT          426 a          355 c          337 g          300 t
ORIGIN      
        1 aacgggcgaa accagcccga ggtaaagtcg aatgtgccat cttcaataaa ggacaaagac
       61 aggaagcgga catttagcca tacgagccag acaaactggc ggggccaaca aaacaatttt
      121 atctcattcg acaatagcga tgagcttgtt tctcaacaaa gcggtactgc cgtttttggc
      181 acagccacct acctgccgcc ctacggcaag gtttccggtt ttgataccga taggctgaaa
      241 aagcgcaaca atgccgttga ttggattcgt accacccgca tcgcgctggc aggctacagc
      301 tacgaaggtg tcgtatgcag aagcggcaca ggctgtccca aacttgtcta taaaacccga
      361 ttttccttcg ataatcccga cttggtaaaa aatgcgggca agctggatag gtacacagac
      421 ctaagccgcg aaaattcgcc catttacaaa ttgaaggatt atccatggtt gggcgtatct
      481 ttcaatttga gcagcgagaa taccgtcaaa gatagcaaat tatccaacaa attgatatct
      541 tcttttagtg aaagcaataa taatcaaacc atcgtctcta cgacagaaga ccaccctatt
      601 tcccttggcg gctcgcagcg cgaacatacc gccgtggcct attatctgaa cgccaaactg
      661 cacctgctgg ataaaaaagg gattggagat atcgcgccag gcaaaacagt gcggttgggt
      721 ctcttgaagc cgagcatcga tgtgcggaaa ggaaatacgg ggcttagcgg cattctatct
      781 tttaatgcta cgtgggacat taaagatacc gggcagattc cggtcaagct cggcctgcaa
      841 gtcaaagcag gccgctgcat caataaaccg aaccccaata agaataccaa agccccttcg
      901 ccggcactga ccgcccccgc gctgtggttc ggacctaggc aagatggtaa ggtgcagatg
      961 tattccgctt cggtttccac ctaccccgac agttcgagca gcaaaatttt cctgcaaaac
     1021 ctttcccgca atgatgacaa aaacaaaccg ggccgctatt ccctcaaacc cttgagtgag
     1081 aatgagatta aaagtaaaga gccgcgtttc aacggaaggc agaccgtcat ccgattggat
     1141 agcggcgtac agctgatcaa actgaatgga agcaaggatg aggtcgtcat ttttggaaac
     1201 aacggcaaca acggcacttt cggcattgtt aaggaagcga acgtcaatct tgaagccgac
     1261 gagtggaaaa aagtgctgct gccttggacg gttcggggtc ccgataatga caataaattt
     1321 aaattaatta accaaaaacc agacagatac agccaaagat accgcatccg cgaaaacggc
     1381 aatcgcgatt tgggcgacat cgtcaacagc ccgattgt
//
LOCUS       DAWXHA010000184         1370 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.184, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000184 DAWXHA010000000
VERSION     DAWXHA010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.184"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..275)
                     /locus_tag="AABD07_002065"
     CDS             complement(<1..275)
                     /locus_tag="AABD07_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFB2356514.1"
                     /translation="MGLTQEVLKELLRYDDNTGKLYWAERPRKYFNSGLHYKSWNTGF
                     SGKEVFLYKGRLGYLKLKIFKKQYNAHRLIWLFVYGKHASSIDHINR"
     gene            complement(266..649)
                     /locus_tag="AABD07_002066"
     CDS             complement(266..649)
                     /locus_tag="AABD07_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356515.1"
                     /translation="MNGAEFTLTPQNKKQVMRSIWDSPDGWFENGNLEITIRPRKSKR
                     SIEQNRRLWFLYREISEKVFIDGRRFSQDVWHEFLKRKFIGCIEMPNGQLMGISTTKL
                     SVREMSEYQEKIISWASMEHGVLWD"
     gene            complement(646..951)
                     /locus_tag="AABD07_002067"
     CDS             complement(646..951)
                     /locus_tag="AABD07_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HFB2356516.1"
                     /translation="MSSAIRKAAKGGQCTPNIAGVCNDNPETVVLCRFPGETHGAGLK
                     SGGLGAGFGCGCRRGAIDGRGAGLSREDKEFYMRRSQLRTIRRLEALGVVGVKGRLK"
     gene            complement(944..>1370)
                     /locus_tag="AABD07_002068"
     CDS             complement(944..>1370)
                     /locus_tag="AABD07_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HFB2356517.1"
                     /translation="RLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAM
                     PSEGFVAVRLRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADY
                     ADEPVAGGGLAVEVGELEMEQTDAADEGWDFIGQEGWDV"
BASE COUNT          301 a          427 c          279 g          363 t
ORIGIN      
        1 tccctattga tatggtctat tgaagaagcg tgtttcccat aaacaaaaag ccaaattaat
       61 ctatgtgcat tatattgttt cttaaatatt tttaacttca aataccccaa cctgcctttg
      121 tataagaaaa cctccttgcc ggaaaatccg gtattccaag atttgtaatg caaaccgcta
      181 ttgaaatact ttcttggacg ctccgcccaa tataactttc ccgtattgtc atcatatctt
      241 aataattctt ttaaaacctc ttgtgttaat cccataaaac accatgctcc atagatgccc
      301 aagatataat cttttcttga tattcagaca tttcccgaac tgataatttt gtcgttgata
      361 tacccattaa ttgcccgtta ggcatttcaa tacatccaat aaattttctt tttaaaaatt
      421 catgccatac atcttgacta aaccttctcc catcgataaa aactttttct gaaatttcac
      481 gatacaaaaa ccatagccgc ctgttctgct cgatgctccg ttttgacttg cgcgggcgga
      541 ttgtgatttc aaggttgccg ttttcaaacc acccgtccgg gctgtcccaa atcgaccgca
      601 taacctgctt tttgttttgg ggcgtcagtg taaattccgc cccgttcatt tcagacggcc
      661 tttcacgccg acaaccccca gtgcttcaag gcggcgtatc gtgcgcaatt gcgaacggcg
      721 catataaaat tccttgtctt cgcggcttag gcctgcgccc ctgccgtcga tcgcgccgcg
      781 gcggcaaccg cacccgaaac ccgcgcccaa accgccgctt ttcaatcccg ccccgtgcgt
      841 ctcgcccggg aaacggcaca acacgaccgt ttcagggttg tcattgcaca cgcccgcgat
      901 gttcggcgtg cattgcccgc ctttggcggc tttgcgtatc gcgctagaca tcccaaccct
      961 cctgtccgat gaaatcccaa ccctcgtctg ccgcatccgt ctgttccatc tccaactccc
     1021 ccacttccac cgccaaaccg ccgcctgcga ccggctcgtc ggcgtaatcg gcggcaatgc
     1081 gccgcacctg cctgtcgttg tgataggcaa cgccttgaag cgcgtccagc gcaaccttca
     1141 gggcgttgtc caaatcgatc accgtcttgt ttgcgccgcc gtctttgttc gctttgggaa
     1201 tcaggcgcag gcgcaccgcc acaaagcctt cggacggcat cgcgcccgcc ccttgcgcga
     1261 tacggcggac ggtttcccta tacgccgccg cctccgcgct cctgaccgcc ctgttgcgcc
     1321 aaatccgcca atatcggttt gccgatacgg ggtaaggcag gataaggcgc
//
LOCUS       DAWXHA010000185         1348 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.185, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000185 DAWXHA010000000
VERSION     DAWXHA010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.185"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            159..1313
                     /locus_tag="AABD07_002069"
     CDS             159..1313
                     /locus_tag="AABD07_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFB2356518.1"
                     /translation="MGIHLDFGISPKTFRQTYLYQKPKLFKGAVRNLEAASWKDINEI
                     YQRADPTAPLFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHIARQVARFAGAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHFA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQAKHEEVRKLIYQLIELDFLEIL"
BASE COUNT          414 a          294 c          274 g          366 t
ORIGIN      
        1 aaatgttaac aacaaaaaac aaaccgcttt tttccgtttg gagacaaatt tttaactaaa
       61 attgtcaaca attccttgac gcacacacaa aaaactctaa tatttgtaac tatatgtaac
      121 attataaatt ttaaatattt tctgagtaag gggaagtaat gggcatccat ctcgacttcg
      181 gcattagtcc taaaacgttc cgacagactt atctgtatca aaagcccaag ctctttaaag
      241 gagcggttcg gaatctcgaa gccgcatctt ggaaagatat caacgagata taccaacgag
      301 cagacccaac cgcaccgctg tttcatctgc gtaaaaaagg cgcaatcgtt cctaaagaag
      361 aatacgtcga aagtttcgac gatttgggca aaactcgcta ccgttttatt aaatccgtta
      421 tctacgaaca tatgaagaat ggtgcgtcgt tagtctataa ccatattaac aacgagccgt
      481 tttcagacca tatcgcccgt caagtcgccc gctttgccgg cgcacatact attgttagtg
      541 gatatcttgc ttttggcagc gacgaatctt ataaaaacca ttgggatacc cgcgatgtgt
      601 atgccatcca gcttttcggc aagaaacgtt ggcaacttac tgcccctgat ttccctatgc
      661 cattgtatat gcaacagact aaagatactg atatttccat tcctgaacat atcgatatgg
      721 atattatcct tgaagcaggt gatgtcctct acatcccacg cggttggtgg cacagaccta
      781 tcccgctcgg ctgtgaaacc ttccacttcg ctgtcggtac cttcccacca aacggctata
      841 attacctcga gtggctaatg aagaaatttc ccaccataga aagtctgcgc cacagtttct
      901 cagactggga gcaagatagg acgcgtatca acgatactgc cgcacaaatt gccgccatga
      961 ttgccgaccc cgtcaattac gaagctttca gtgaagactt tctcggcaaa gaacgtaccg
     1021 ataccgcttt tcatctcgaa cagttcgcga atcccaacgc tactccgctt tcagacgacg
     1081 tcaggttgag actaaatgcc aataatttgg atacgttgga aaagggatat ttgattggga
     1141 atgggatgaa gataagcgta gatgagttgg ggaaaaaagt gttagaacac atcggtaaga
     1201 atgaaccgtt attgttgaaa aatctactgg ttaacttcaa tcaggcaaaa catgaagaag
     1261 ttaggaagtt gatctatcag ttgatagagt tagattttct ggaaattttg tgagggattc
     1321 tatgaaaaac tggaagcagt ttatattt
//
LOCUS       DAWXHA010000186         1306 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.186, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000186 DAWXHA010000000
VERSION     DAWXHA010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.186"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..183
                     /locus_tag="AABD07_002070"
     CDS             <1..183
                     /locus_tag="AABD07_002070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356519.1"
                     /translation="NQSVRRRGVSDGIGGGSRKKDGGAWGISPRNAPNLSGKAGKTLW
                     EYPSLPEIENRVKTQI"
     gene            197..691
                     /locus_tag="AABD07_002071"
     CDS             197..691
                     /locus_tag="AABD07_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HFB2356520.1"
                     /translation="MTVQNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNF
                     NLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGF
                     DGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETA
                     GGGI"
     gene            1046..>1306
                     /locus_tag="AABD07_002072"
     CDS             1046..>1306
                     /locus_tag="AABD07_002072"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356521.1"
                     /translation="MAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKA
                     VRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQ"
BASE COUNT          337 a          370 c          399 g          200 t
ORIGIN      
        1 aaccaatccg tgcgccgccg gggcgtttca gacggcatcg ggggcggcag tcgcaaaaag
       61 gacggcggtg cttggggaat atccccccgc aatgcgccga atttgagcgg gaaggcgggt
      121 aaaacgcttt gggaatatcc cagcctaccc gagattgaaa accgcgttaa aacgcaaatt
      181 tgaaaggaaa tacggaatga cggtgcaaaa cacgcaaacc gaaaccgtcc ggacggaagc
      241 cgcgccgcaa caaggcggca ataccaaccc gggctattac aaaaaccgcg ccttcgagtg
      301 cgtcgggttt gcgcaatacc tcaacttcaa cctcggcaac gccttcaaat acatctggcg
      361 gcacaaggaa aaaggcgggc gcgaagactt ggaaaaagcc ctgcggtact tggaacgcca
      421 acgcgccgac gcgccgaagt tcaagaaact caaatgccgc cgctatgaaa aaatgtacgc
      481 cggtctgaaa gattgcgggt tcgacggcgg cacggaggcc gcgctgcttg ccgtcatctc
      541 cgccgcttat tacatccgcg acggcgaaga caattttgcg tgggcggccg cctgtgtcga
      601 agatttgttg gaaaaaatgc cgcctgaagc ggggcgggcc ccgcaccctg aaagcccgat
      661 gccgcctgaa acggcgggcg gaggcatttg acccgccaac ccgaccgccg ccattcccgc
      721 gaaagcggga atccggaatc ccggactttc agataatctt tgaatattgc tgttgttcca
      781 aggtccggat tcccgcctgc gagggaatga cggaggcggc gggaatccga ccccgaccca
      841 taaaaccgac cgaaaggaaa taaaacaatg gataccctgt taagcatcat caccgcgctg
      901 tcgtttgccg gggcggcgac gttggcggta tggcttttgg tggaagccgc cgacgcggtt
      961 ttgcgccgca agcgcgacgg caaaggcgaa gacgacttcg acggcttcgg atattaaaca
     1021 cataaaaaca aaaggaaaaa tcaaaatggc ggaagaaatg cgcacctgca aggcctgcgg
     1081 cgggaccaag ccgttggaga aagggtttaa tgccgtcccg cgcaaggaag ggggggtcta
     1141 ttattacaaa tcgtgcaaaa cctgccgcaa caaggcagtc cggcaaaagc gcgcggaaaa
     1201 acgcgcggcg gcgggagccg gcgcgatgac ggcggcaagg ctgcacggat acatccgcgc
     1261 cgcgcacgcc gcctgcccga tattgggcgc cggcctgtgg acgcaa
//
LOCUS       DAWXHA010000187         1258 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.187, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000187 DAWXHA010000000
VERSION     DAWXHA010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.187"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..217)
                     /locus_tag="AABD07_002073"
     CDS             complement(<1..217)
                     /locus_tag="AABD07_002073"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356522.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCPVPD
                     CRGNGKTDVPCGFARMNGGYCFYQSVSF"
     gene            445..741
                     /locus_tag="AABD07_002074"
     CDS             445..741
                     /locus_tag="AABD07_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356523.1"
                     /translation="MRFKAEYARSKNDADDKRGNAHIANGAIGKMAAVYAGYTYTQPG
                     GESTRFRGGLERVQVKRYLGEKCCGYACPKSERFTLQADGEIRQNLGEGWFLKL"
     gene            738..977
                     /locus_tag="AABD07_002075"
     CDS             738..977
                     /locus_tag="AABD07_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356524.1"
                     /translation="MSGVAVYLRNKNRIAIASQDANLNSKGRFVSSGLNVGKQLTGSL
                     GVEFDPYYRHRAIRKSAEFVSNTTKTKTDSEKFNE"
BASE COUNT          385 a          341 c          253 g          279 t
ORIGIN      
        1 aaaaagaaac agattgataa aaacaatacc cgccattcat tcgggcaaaa ccgcacggaa
       61 catccgtttt cccgtttcca cgacaatccg gtacaggaca ccccgctgcc gattccgcct
      121 gcacatccgg caaaatttca tacgcaagga aaatgttgaa aacaaaaaga actaattgct
      181 tgaaaaaaga tttaattgga atgcgggtat ttcccacact ttctccattt atttatcctc
      241 attataaaaa catgaaaaaa aacccctgct tgcactctca cttgcagccg tgtccgccgt
      301 tacggtagcc gatattcccg agtctaacgg caaaggcgaa tacaaagtct ttaccgctta
      361 tgttaaaggc aaagccactg ccggcaattt gaaagaaaaa taacgcacac cgtccatcgg
      421 ttttcgttca acgaacgcca cgatatgcgt tttaaggcag agtacgcccg aagcaaaaac
      481 gatgcagacg acaaaagagg gaatgcacac atcgctaacg gcgcaatagg caaaatggct
      541 gccgtgtatg ccggttatac ctacacccaa ccgggcggcg aatccacacg tttccgtggc
      601 ggtttggagc gtgtccaagt taaacgttat ctgggagaaa aatgctgcgg ctacgcctgt
      661 ccaaaaagcg aacgcttcac cctgcaagca gatggtgaaa tccgtcaaaa ccttggcgaa
      721 ggctggtttc tgaagctatg agcggggtgg ctgtctatct ccgcaacaaa aacagaatag
      781 caattgcctc ccaagatgcc aacctaaact ccaaaggccg gttcgtcagc agcggtctga
      841 atgtgggcaa acaactgacc ggcagtctcg gcgtagagtt tgacccatac taccgccacc
      901 gcgcaatccg caagtctgcc gaatttgtct cgaacactac caaaaccaaa acagacagcg
      961 aaaagtttaa cgagtagggc ttccgcgtag ccgcaacgtt ctaattccct tacgtataaa
     1021 aagcagcata aaaatgctgc cttttcccat ttccaaggga agtattccgt agtgcagctt
     1081 acctcattgt ttcacacaaa ccgaaaatgc cgtcttaaaa ccaattttca gacggcattt
     1141 gtcccttaaa acacgttttt tcaagcgcga ccataccaaa cacccacagg ttgccttcca
     1201 cccttcgtac aacctttgct ccatcaaaca tccacttcct aaatactgat gtatactg
//
LOCUS       DAWXHA010000188         1233 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.188, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000188 DAWXHA010000000
VERSION     DAWXHA010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.188"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(698..1147)
                     /locus_tag="AABD07_002076"
     CDS             complement(698..1147)
                     /locus_tag="AABD07_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFB2356525.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT          382 a          305 c          186 g          360 t
ORIGIN      
        1 atttcctcca aacgatcgga tatcttcaaa tgcacatttc acagaaaggt cgtctgaaac
       61 ccattttcag acgacctttt tccacttcgc aaaacaagaa ttcccacccc tctccccaaa
      121 catcgcccaa accagtaaat tccccatatt tcaacaactc cttggaagca aaccatgtcc
      181 cgtatctacc tacccctcct atttccgccc cacatcgtcg aacgcggcct tttgtatttt
      241 cagcaggaca aggttcgcga tgtccaaaaa atttccttag ggcgttatcg ggcgaaggta
      301 ttcgattcgg aaaactatta ggcatggttg aagctggata gtgatttgta cattaaggac
      361 ggggctgcga ttgcccttat gtctaaaggt gcaaacatgc cttaaattac taagcctata
      421 acgaattgga aacaaaatgc cgtctgaaaa catcttcaga cggcattata aaatctgttc
      481 accttttcag atgagtaatg tacaccccta tacaattttt gctaccatgc accataaatc
      541 cacggctaaa gataattggg tttattcttt tatccagaaa caatccagat acggatcacg
      601 ggtcataact ataggcttaa tattacacga ttctcattcc atcaaggcgg aaaaccgcac
      661 aaatactgaa acactatcga tcgatttgta aacaagccta cttaagtaac ttgcagtcct
      721 tatcatttcc tttaaaataa tccagcccgt cactacacga actggcggac ttcttgcaaa
      781 taaaggttac tagattttca ttcatcttaa taataaaagg atttttatct ttatctatgg
      841 ctaccgcctt caacatgaat ttactgtcta aagccccgcg cgcgattcca ttcaaacgga
      901 tacaaaagcc ttctgcctct ttaatcggca aacttggcca tttggtagat gtttgtttaa
      961 atctcccatt ctgcagataa aacttttcca taaaatgtgc attttctaac aaggctgccc
     1021 gcactgcatt tatctttgct ttctcaacat aattgcgata gctcggataa acaattaaag
     1081 caagtacaga caatatcaag accactgata ttaattcaac cagcgtaaac ccccgattat
     1141 cagtcattac tttacttcca ataagaacag attattcaac atatttcttt gaacagactt
     1201 actatcccat tcagcagtat gcatatttcc cac
//
LOCUS       DAWXHA010000189         1213 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.189, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000189 DAWXHA010000000
VERSION     DAWXHA010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.189"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(86..865)
                     /locus_tag="AABD07_002077"
     CDS             complement(86..865)
                     /locus_tag="AABD07_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFB2356526.1"
                     /translation="MALKGASDFLRAFCSVQTERRQCAEHGGYAAKSVLRGVWTGCPA
                     CRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMAR
                     AKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDM
                     LRTVKDSFGGGGGEAGAVGVFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMP
                     MLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWDSYRA"
     gene            complement(877..>1213)
                     /locus_tag="AABD07_002078"
     CDS             complement(877..>1213)
                     /locus_tag="AABD07_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356527.1"
                     /translation="KTGRHETELSLLADYGITGQIAEDFLTIRKAKRQPLTETAVRLI
                     AADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGLTHNQTAAVPDAGS
                     YGDMPTTDF"
BASE COUNT          197 a          440 c          337 g          239 t
ORIGIN      
        1 ccgcgccttc gcgcatttcg caaaaccgcg caccggcgtg ccggtgttgg ttttgaagtc
       61 ggcatggttg cagaaaaagc aggtttcacg cacggtagct gtcccagtcg aacggaatca
      121 gcttgccgcc gccgtcccgc agcctgtccc tgatccgcgc gtcggtgttt tcgcggaagg
      181 cttccgccgt caggttggtc agcaccagca tcggcatcag ccgctcatag cgggcgttga
      241 cgacggaaaa caaaatccgc ccgtccgttt ccgacagact gcccgcgccg aactcgtcca
      301 gcaccagcaa atcgggcttc acgaaaaccc cgaccgcccc cgcctcgccg ccgccgccgc
      361 cgaaactgtc cttgaccgtc cgcagcatat cgcccaccgt gatgaccagc gcgcttttgc
      421 cggcggcgat gacttcgcgg gcgatgccgc aggcaaggtg gtttttgccc gtgcccctcc
      481 tgcccgaaaa aatcatgctc cgccccgtct gcaacacatc ggcgaagttt gccgcatact
      541 cggcggcggc cgccttcgcc ctcgccatcc ccgggatcga atcgctgacg gcgtagtttt
      601 caatccggca gtttctgaac cgcggggcga tgcccgaacg cccgatgcgt ttttccagcg
      661 cgtcgcgcat cgccccgcgg cgcagcgttt ccgcgtatgc cgccatttcg tccgccgcct
      721 ccagcttccg gcaggccggg cagcccgtcc acacgccgcg caaaacgctt ttcgccgcgt
      781 atccgccgtg ttccgcgcat tgccgccgtt cggtctgcac actgcagaaa gccctcaaaa
      841 aatcagacgc gcccttcaaa gccataccaa gccccctcaa aaatccgttg tcggcatatc
      901 gccgtagctt cccgcatccg gcacggcggc ggtttggttg tgcgtcagac cgccgcggtt
      961 tccggacctg ccgaaagttt tgttttgcag ccagtcggcg cggaagctgc cccagccgct
     1021 ggcgatggcg tactccgccg cctgcagcgc cgtcatcccg catttctccg catcggcggc
     1081 aatcagcctc accgccgtct ccgtcagcgg ctgccgtttc gctttgcgga ttgtcaaaaa
     1141 gtcttcagcg atttgccccg tgatgccgta gtcggcaagc agcgaaagct cggtttcgtg
     1201 cctgccggtt ttt
//
LOCUS       DAWXHA010000190         1132 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.190, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000190 DAWXHA010000000
VERSION     DAWXHA010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.190"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..365
                     /locus_tag="AABD07_002079"
     CDS             <1..365
                     /locus_tag="AABD07_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356528.1"
                     /translation="KLKSSRPNTVFGGIVMASTGVNKEIKGKKLSLWAKRQDGSVKWF
                     CGQPVKRESNNADAVTADGTDGANGTKIETKHLPSTCRDESSAGCIETPRADFKHFQK
                     ISRYRILPESRQMAGKQR"
     gene            373..1011
                     /locus_tag="AABD07_002080"
     CDS             373..1011
                     /locus_tag="AABD07_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356529.1"
                     /translation="MASSSSIIGKYVEEVKVENGVVTAKMKSDGVNKEIQGKKLSLWA
                     KRQAGSVKWFCGQPVTRDKAVTDDAVKDVTGNDKIETKHLPSTCRDKSSAGCTKTPEY
                     YLNHGKWPEDNDKAGVASSSSIKGKYVKEVKVENGVVTATMNSSNVNKEIKDKRLSLW
                     AKRENGSVKWFCGQPVTRTDDAAKDAVTADAKDAIETKHLPSTCRDTSSDAK"
BASE COUNT          349 a          318 c          271 g          194 t
ORIGIN      
        1 caaaactcaa atcaagccgt ccgaataccg ttttcggcgg tatcgttatg gcttcaaccg
       61 gcgtaaacaa agaaatcaaa ggcaaaaaac tctccctgtg ggccaagcgt caagacggtt
      121 cggtaaaatg gttctgcgga cagccggtta agcgcgaaag caacaacgcc gacgccgtca
      181 ccgccgacgg caccgacggc gccaacggca ccaaaatcga aaccaagcac ctgccgtcaa
      241 cctgccgcga tgaatcatct gccggttgca tagaaacacc acgcgccgat ttcaaacact
      301 tccaaaaaat cagccgttac cgaatattac ctgaatcacg gcaaatggcc ggaaaacaac
      361 ggtgatgccg gcgtggcatc ttcttcatca atcataggca aatatgttga ggaagttaaa
      421 gtcgaaaacg gcgtcgttac cgccaaaatg aaatcagacg gcgtaaacaa agaaatccaa
      481 ggcaaaaaac tctccctgtg ggccaagcgt caagccggtt cggtaaaatg gttctgcgga
      541 cagccggtta cgcgcgacaa agccgtcacc gacgacgccg tcaaagacgt caccggcaac
      601 gacaaaatcg aaaccaagca cctgccgtca acctgccgcg ataaatcatc tgccggttgc
      661 acaaaaacac ccgaatatta cctgaatcac ggcaaatggc cggaagacaa cgacaaggcc
      721 ggcgtggcat cttcttcatc aatcaaaggc aaatatgtta aggaagttaa agtcgaaaac
      781 ggcgtcgtca ccgccacaat gaattcaagc aacgtaaaca aagaaatcaa agacaaaaga
      841 ctctccctgt gggccaagcg tgaaaacggt tcggtaaaat ggttctgcgg acagccggtt
      901 acgcgcaccg acgacgccgc caaagacgcc gttaccgccg acgccaaaga cgccatcgaa
      961 accaagcacc tgccgtcaac ctgccgcgat acgtcatctg atgccaaatg aggcaaatta
     1021 ggccttaaat ttcaaataaa tcaagcggta agtgatttcc cacggccgcc cggatcaacc
     1081 cgggcggctt gtcttttaag ggtttgcaag gcgggcgggg tcgtccgttt tg
//
LOCUS       DAWXHA010000191         1131 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.191, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000191 DAWXHA010000000
VERSION     DAWXHA010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.191"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..265)
                     /locus_tag="AABD07_002081"
     CDS             complement(<1..265)
                     /locus_tag="AABD07_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356530.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFGGKPADEARFAAVLTETCRRAVKK"
     gene            complement(302..565)
                     /locus_tag="AABD07_002082"
     CDS             complement(302..565)
                     /locus_tag="AABD07_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356531.1"
                     /translation="MADILPSDKRRQPPKTKGNPINIIEQETKRTELRKIDAEIAKII
                     ADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA"
     gene            complement(585..833)
                     /locus_tag="AABD07_002083"
     CDS             complement(585..833)
                     /locus_tag="AABD07_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356532.1"
                     /translation="MHGFRDLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHH
                     YLTADSYRLQERRELAEWYGRRHRQAYEAAAQNTCNKT"
     gene            complement(794..>1131)
                     /locus_tag="AABD07_002084"
     CDS             complement(794..>1131)
                     /locus_tag="AABD07_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFB2356533.1"
                     /translation="PSALLSARWQDIDLTTRLWHIPAADMKTKHPFTVPLSDWAVEIL
                     RELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTPANPNTPCTD
                     SATSSPTSA"
BASE COUNT          173 a          235 c          408 g          315 t
ORIGIN      
        1 tttttttgac tgcccggcgg caggtttcgg taaggacggc ggcaaatcgg gcttcgtctg
       61 ccggtttgcc gccgaaaaaa ataaaatcgt aaagggtgat gccgttttcg gaatggcggt
      121 aatgcccgcc cgggcattcg ccgtctgtct gcctgtggat tttggcaatc aggcggggat
      181 agcggcaatg ggtaatgaaa cggcttgcgc cgtcttgccc gataatccat tcggggtagc
      241 ggttgaatag tgcggctctg ttcattttgt tgagggataa agcccctcgc ggggcttgtg
      301 gtcaggcaaa tttgaatatc agtgccaaca cggcggcgat ggcggtaacc agaccggtgg
      361 ccgccatcat gggataccag cgggactctt gggctatttt tacggattcg gcgttgattt
      421 tgtgcgcgtc ggcaatgatt ttggcgattt cggcatctat ttttcttaac tcggtgcgtt
      481 ttgtttcttg ttcgattatg tttattggat ttcctttcgt ttttggcggt tgccgccgct
      541 tgtcggatgg caggatgtct gccatgtatg tatgttaata ccttttaggt tttattgcaa
      601 gtgttttggg cggcggcttc gtatgcttgg cggtggcggc ggccgtacca ttcggcgagt
      661 tcgcgccgct cttggaggcg gtagctgtcg gcggtcaggt agtggtgcag gcttgagaag
      721 ccggcgcgtt ggagggcggc gcggctgatg tggccaaggg cgaggtctgt tgtgagggtg
      781 tcttttccgg cggtcaggct gatgttggtg aagaggtcgc ggaatccgtg catggtgtgt
      841 ttggatttgc cggggtgctg ccgtcatagc ccagtcgtcg gatggcgttg tgggcgaatt
      901 tgatgctgat gtggtcggga tggggggcgg gtttgcgccg tgggcggatg cctgggaaaa
      961 ggtggatgtt gtcgccggtc tgtgtgtgca gctctcggag tatttctact gcccagtccg
     1021 acagtgggac ggtaaagggg tgtttggtct tcatgtcggc ggcggggatg tgccataacc
     1081 gggtggtgag gtcgatgtct tgccagcggg cggaaagcag tgcggacgga c
//
LOCUS       DAWXHA010000192         1106 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.192, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000192 DAWXHA010000000
VERSION     DAWXHA010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.192"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..272)
                     /locus_tag="AABD07_002085"
     CDS             complement(<1..272)
                     /locus_tag="AABD07_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2356534.1"
                     /translation="MTNRDLKAIRIDNLKRFFENKKLPVKDKSLLSQLMSGKASFGEK
                     VSRRLEEEYGMGSLYLDSVPSEPTPVLINPDLPHEVKDIHRPMMWS"
     gene            427..615
                     /locus_tag="AABD07_002086"
     CDS             427..615
                     /locus_tag="AABD07_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356535.1"
                     /translation="MSEQRGAKTEYAKKLGLSLSFLWQIENGRAVTPKRLYKDVMLLT
                     KNKVSISELISEFRVCPK"
     gene            complement(827..1015)
                     /locus_tag="AABD07_002087"
     CDS             complement(827..1015)
                     /locus_tag="AABD07_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356536.1"
                     /translation="MPSDLSFILAKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKP
                     EESEPNTDDEYLIGLLSK"
BASE COUNT          308 a          226 c          262 g          310 t
ORIGIN      
        1 ctgctccaca tcatcgggcg gtggatgtct ttgacttcgt gcggcaggtc ggggttgatg
       61 aggacgggcg ttggttcgct cggaacggaa tccaagtaca gactgcccat cccatattct
      121 tcttcaagcc gtctgcttac cttttcgcca aaagatgctt taccgctcat caattgagat
      181 aaaaggcttt tgtctttaac cggcaacttt ttattttcaa agaatctttt taaattatcg
      241 atacggatgg ccttcagatc tctattagtc attttcgcgc tccattcaga ttgggattca
      301 attttattta gtttctgcta aacaaacaaa tattaaattt tcttgcctat gcgtttaata
      361 tttgctaaac tcattaaata tttacggtga aactacagaa tgactcattc agaatttatt
      421 aaaacgctgt cagaacagcg tggtgcaaaa acggaatacg ctaaaaaact tggcttatcc
      481 ctgtcttttc tatggcagat agaaaacgga cgggcagtaa cgccaaagcg tctttataaa
      541 gacgttatgt tgttgacaaa aaataaggtt tctatttctg aattaatttc ggagttcagg
      601 gtttgtccca aataaaaagc ccgtcgggtc agatgttaat tgatataacc gaattgaagc
      661 ggaagtcatc cgcaatttac cggaaaggaa aaaaatgaag aagcaggaca gaaaccgcct
      721 gtcgaagaaa gacagacggc tgattaaaaa ggcgatgctg aaagccgccg ccaaaggcag
      781 cgatgaggtt tacaaaatcg cgccgggttt gaaagacggc tttgaattac ttggaaagca
      841 gcccgattaa atattcgtca tcggtatttg gctccgattc ttcgggtttt tgatgaagtg
      901 ttcggatgaa taccgccaat tctccggctt gtcctttggc cgtactgccg cttaagcgga
      961 tagaaccgct gcggataagc tctttggcga gtatgaagga taagtcggac ggcatttttt
     1021 tactccgtcg gccgttgtgt ggaaacccgg ttgtaacggg gtgacggcaa atcggaaaga
     1081 cggttgaccg cccggacaga cgggcg
//
LOCUS       DAWXHA010000193         1073 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.193, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000193 DAWXHA010000000
VERSION     DAWXHA010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.193"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..278)
                     /locus_tag="AABD07_002088"
     CDS             complement(<1..278)
                     /locus_tag="AABD07_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2356537.1"
                     /translation="MSEFKDRLKEARKNKNLSQENLAKLAEVSQSTIAALESGRNKKA
                     TNIAKLAKILDVSAFWLETGEGSRNTPVLINPDLPHEVKDIHRPMMWS"
     gene            394..582
                     /locus_tag="AABD07_002089"
     CDS             394..582
                     /locus_tag="AABD07_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356538.1"
                     /translation="MDEPRDLVLFLKEKMSSAAIAKEVGCSKEFINKIGNGERKNPRY
                     QIVDSLRSLYRKNQNQPK"
     gene            662..922
                     /locus_tag="AABD07_002090"
     CDS             662..922
                     /locus_tag="AABD07_002090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356539.1"
                     /translation="MKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYRIAPGLKDGFE
                     LLGKQLNQIFVIGIWLRFFGFLMKCSDEYRQFSGLSFGRTAL"
BASE COUNT          293 a          215 c          269 g          296 t
ORIGIN      
        1 ctgctccaca tcatcgggcg gtggatgtct ttgacttcgt ggggcaggtc ggggttgatg
       61 aggacgggcg tatttcggct gccttcgcct gtctcaagcc aaaaagccga tacatctaaa
      121 attttggcaa gtttcgcgat attggtagcc tttttattcc tacccgattc caacgctgcg
      181 atggttgatt gacttacttc tgccagtttt gccaaatttt cttgacttaa atttttattt
      241 ttccgcgcct ctttcaggcg gtctttaaat tcagacatat caaactcctt ataacgcaac
      301 gggtactatt gtacttttta ttataagtat tttggtgctt gcattatgag tacgtttgta
      361 cttataatgt tcaaaatttg agctggggca aatatggacg aaccaagaga tttagtgttg
      421 tttttgaaag aaaaaatgag cagcgcggct atcgcgaaag aggtcggctg ctcgaaagag
      481 tttattaata aaatcggtaa cggcgagcga aaaaacccgc gttatcaaat tgttgattct
      541 ttaaggagtt tatacaggaa gaatcaaaac caacccaaat aaaaagcccg tcgggtcaga
      601 tgttaattga tataaccgaa ttgaagcgga agtcatccgc aatttaccgg aaaggaaaaa
      661 aatgaagaag caggacagaa accgcctgtc gaagaaagac agacggctga ttaaaaaggc
      721 gatgctgaaa gccgccgcca aaggctgcga tgaggtttac agaatcgcgc cgggtttgaa
      781 agacggcttt gaattacttg gaaagcagct caatcaaata ttcgtcatcg gtatttggct
      841 ccgattcttc gggtttttga tgaagtgttc ggatgaatac cgccaattct ccggcttgtc
      901 ctttggccgt actgcccttt aagcggatag aaccgctgcg gataagctct ttggtaagta
      961 tgaaggataa gtcggacggc atttttttac tccgtcggcc gttgtgtgga aacccggttg
     1021 caacggggtg acggcaaatc ggaaagacgg ttgaccgccc ggacagacgg gcg
//
LOCUS       DAWXHA010000194         1053 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.194, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000194 DAWXHA010000000
VERSION     DAWXHA010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.194"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..>1053
                     /gene="tuf"
                     /locus_tag="AABD07_002091"
     CDS             <1..>1053
                     /gene="tuf"
                     /locus_tag="AABD07_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HFB2356540.1"
                     /translation="KKFGGAAKAYDQIDNAPEEKARGITINTSHVEYETETRHYAHVD
                     CPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPYIIVFMNKCD
                     MVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALEGDAAYEEKIFELATALD
                     SYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTT
                     CTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLS
                     KEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEKGVEMVMPGENVTITVELIAPIAMEE
                     GLRFAIREGGRTVGAGV"
BASE COUNT          276 a          296 c          275 g          206 t
ORIGIN      
        1 aaaaaattcg gcggcgctgc aaaagcttac gaccaaatcg acaacgcacc cgaagaaaaa
       61 gcacgcggta ttaccattaa cacctcgcac gtagaatacg aaaccgaaac ccgccactac
      121 gcacacgtag actgtccggg tcacgccgac tacgttaaaa acatgattac cggcgccgca
      181 caaatggacg gtgcaatcct ggtatgttct gctgccgacg gccctatgcc gcaaacccgc
      241 gaacacatcc tgctggcccg tcaagtaggc gtaccttaca tcatcgtgtt catgaacaaa
      301 tgcgacatgg tcgacgatgc cgagctgttg gaactggttg aaatggaaat ccgcgacctg
      361 ctgtccagct acgacttccc cggcgacgac tgcccgatcg tacaaggttc cgcactgaaa
      421 gccttggaag gcgatgccgc ttacgaagaa aaaatcttcg aactggctac cgcattggac
      481 agctacatcc cgactcccga gcgtgccgtg gacaaaccat tcctgctgcc tatcgaagac
      541 gtgttctcca tttccggccg cggtaccgta gtcaccggcc gtgtagagcg aggtatcatc
      601 cacgttggtg acgagattga aatcgtcggt ctgaaagaaa cccaaaaaac cacctgtacc
      661 ggcgttgaaa tgttccgcaa actgctggac gaaggtcagg cgggcgacaa cgtaggcgta
      721 ttgctgcgcg gtaccaaacg tgaagacgta gaacgcggtc aggtattggc caaaccgggt
      781 actatcactc ctcacaccaa gttcaaagca gaagtgtacg tattgagcaa agaagagggc
      841 ggccgccata ccccgttttt cgccaactac cgtccccaat tctacttccg taccactgac
      901 gtaaccggcg cggttacttt ggaaaaaggt gtggaaatgg taatgccggg tgagaacgta
      961 accattactg tagaactgat tgcgcctatc gctatggaag aaggtctgcg ctttgcgatt
     1021 cgcgaaggcg gccgtaccgt gggtgccggc gtg
//
LOCUS       DAWXHA010000195         1043 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.195, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000195 DAWXHA010000000
VERSION     DAWXHA010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.195"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..750
                     /locus_tag="AABD07_002092"
     CDS             <1..750
                     /locus_tag="AABD07_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HFB2356541.1"
                     /translation="IRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYL
                     DTDVLVRDGLKPLWDTDLGGNWVGACIDLFVERQEGYKQKIGMADGEYYFNAGVLLIN
                     LKKWRRHDIFKMSCEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMA
                     NGFASRHTDPLYLDRTNTAMPVAVSHYCGSAKPWHRDCTVWGAERFTELAGSLTTVPE
                     EWRGKLAVPPTKRMLQRWRKKLSARFLRKIY"
     gene            810..>1043
                     /locus_tag="AABD07_002093"
     CDS             810..>1043
                     /locus_tag="AABD07_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFB2356542.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLSAVVGQTWRNLDILIVDDGSTD
                     GTPAIARHFQEQDGRIRIISNPRNLGFIASLNIG"
BASE COUNT          256 a          259 c          285 g          243 t
ORIGIN      
        1 atccgcttta tagacgtaaa ccccgaagat ttcgccggct tccccttaaa catcaggcac
       61 atttccatta cgacttatgc ccgcctgaaa ttgggcgaat acattgccga ttgcgacaaa
      121 gtcctgtatc tggatacgga cgtattggtc agggacggcc tgaagccctt atgggatacc
      181 gatttgggcg gtaactgggt cggcgcgtgc atcgatttgt ttgtcgaaag gcaggaagga
      241 tacaaacaaa aaatcggtat ggcggacgga gaatattatt tcaatgccgg cgtattgctg
      301 atcaacctga aaaagtggcg gcggcacgat attttcaaaa tgtcctgcga atgggtggaa
      361 caatacaagg acgtgatgca atatcaggat caggacattt tgaacgggct gtttaaaggc
      421 ggggtgtgtt atgcgaacag ccgtttcaac tttatgccga ccaattatgc ctttatggcg
      481 aacgggtttg cgtcccgcca taccgacccg ctttacctcg accgtaccaa tacggcgatg
      541 cccgtcgccg tcagccatta ttgcggctcg gcaaagccgt ggcacaggga ctgcaccgtt
      601 tggggtgcgg aacgtttcac agagttggcc ggcagcctga cgaccgttcc cgaagaatgg
      661 cgcggcaaac ttgccgtccc gccgacaaag cgtatgcttc aaagatggcg caaaaagctg
      721 tctgccagat tcttacgcaa gatttattga cggggcaggc cgtctgaagc cttcagacgg
      781 catcggacgt atcggaaagg agaaacggat tgcagccttt agtcagcgta ttgatttgcg
      841 cctacaacgt agaaaaatat tttgcccaat cgctgtccgc cgtagtgggg cagacttggc
      901 gcaacttgga tattttgatt gtcgatgacg gctcgacgga cggcacgccc gccattgccc
      961 ggcatttcca agaacaggac ggcaggatca ggataatttc caatccccgc aatttgggct
     1021 ttatcgcctc tttaaacatc ggg
//
LOCUS       DAWXHA010000196         1039 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.196, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000196 DAWXHA010000000
VERSION     DAWXHA010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.196"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..778
                     /gene="mafB"
                     /locus_tag="AABD07_002094"
     CDS             <1..778
                     /gene="mafB"
                     /locus_tag="AABD07_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFB2356543.1"
                     /translation="QTLQGIHDLGNVSPAAQLAAASLLQDSAFAVKDSINSAKQWADA
                     HPNITATAQTALAVAEAAGTVWGGKKVELNPAKWDWVKNTGYETTVTRKTLDGQIAGK
                     NKPIKPSSGDYVLPVGRQIIDPTRTSFSQATVSYQKRGANYNYDSLVAAMNEKKSWVG
                     DRVDVVNMPDGAPTSMDNTRIMAAREAGVKVEANVHNFNDRLSSKERIRFKHDGIEPQ
                     TWGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            775..>1039
                     /locus_tag="AABD07_002095"
     CDS             775..>1039
                     /locus_tag="AABD07_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFB2356544.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDK"
BASE COUNT          345 a          193 c          228 g          273 t
ORIGIN      
        1 gcaaacttta cagggtattc acgatttagg aaatgtaagt cccgcagcac aacttgcggc
       61 cgcgagccta ttacaagaca gtgcttttgc ggttaaggac agtatcaatt ccgccaagca
      121 atgggctgat gcccatccga acattacagc tactgcccaa actgcccttg ccgtagcaga
      181 ggctgcaggt acggtttggg gcggtaaaaa agtagaactt aacccggcca aatgggattg
      241 ggttaaaaat accggctatg aaacaactgt tacccgaaag actttagatg ggcaaatagc
      301 tggcaagaac aagcctatta aaccttcttc aggagattat gtcttgccgg taggcagaca
      361 aatcatagat cctactcgta catctttttc acaagctaca gttagctatc agaagcgtgg
      421 tgcaaattac aactatgatt ctcttgtagc tgcaatgaac gaaaaaaaat catgggttgg
      481 cgacagggtt gatgttgtta atatgcctga tggagcacct actagtatgg ataacacgcg
      541 tattatggca gcacgtgaag caggggtaaa agtggaagcg aatgttcata attttaatga
      601 ccgattatca tcaaaagaga gaatcaggtt taagcatgat ggtattgagc ctcaaacttg
      661 gggagaagct atccagctac gaattagaaa gcaagaaaca caaaaaggag ttccagaagg
      721 gtggagcaaa agatttccta acggaagtat ttatgatgta aaggtactta ggaaatgata
      781 aaacaaaata gttttgttcc gtatcctgaa gcaatgcttc ctaaaggatt taaatatccg
      841 caaagttatt taaaattagc tcaatccact catgccatta actacgatga acaatattct
      901 tttccttggt ggtttgaaaa tgcagaaagc aatatatcag aagtaattga catttatttt
      961 gaaataactg gcattccaaa cctattacct tttgctagaa accaagagtg ggctgcctgt
     1021 tttgatattt cagataaat
//
LOCUS       DAWXHA010000197          996 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.197, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000197 DAWXHA010000000
VERSION     DAWXHA010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.197"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            37..381
                     /locus_tag="AABD07_002096"
     CDS             37..381
                     /locus_tag="AABD07_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HFB2356545.1"
                     /translation="MNLPFRAMVSDLGGTLLTPEHLVGDLTIDTLRVLEQKGVDIILA
                     TGRNHTDMSSILGKIGAERAVMITSNGARVRDLQGNLLYSNSLPEELVLELYKTSYVG
                     NLIQIPRFCRHQ"
     gene            335..868
                     /locus_tag="AABD07_002097"
     CDS             335..868
                     /locus_tag="AABD07_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HFB2356546.1"
                     /translation="MWEILFRYQDFVAINKPQGISVHRSGGEVSLTATLAAQLGVEKV
                     WLLHRLDKQAGGILLFALNPQSAAVLAAQFAERKMKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNMENIAVTRFFSIRISEKMRLFILEPHTGKTHQLRVVMKSLGSSIF
                     GDSLYGGTESETMFLYA"
BASE COUNT          298 a          191 c          239 g          268 t
ORIGIN      
        1 tgatgtgata agtatagttt attttttgag gtttttatga atttaccttt tcgggcaatg
       61 gtgtctgatt taggtggcac acttttaaca cctgaacatt tagtgggtga tcttaccatt
      121 gatactctga gagtattaga gcaaaaaggc gtagatatta ttttggcaac aggacgcaat
      181 cataccgata tgtcatccat tcttggaaaa atcggtgcgg aacgtgcggt tatgattaca
      241 tcaaacggtg ctcgtgtacg ggatttacag ggtaatttgc tttatagcaa tagtttgcct
      301 gaagaattag ttctcgagct ttacaaaaca tcatatgtgg gaaatcttat tcagatacca
      361 agattttgtc gccatcaata aacctcaagg catatccgtc caccgttccg gcggcgaagt
      421 cagtctgacg gcaacacttg cggcacagtt gggcgtagaa aaggtatggt tgctgcacag
      481 gttggacaag caggccggag gcatattgct gtttgccctt aatccccaaa gtgccgctgt
      541 tcttgccgca cagtttgccg aaaggaaaat gaagaaaacc tatttggctt tgtccgaccg
      601 caaaccgtcc aaaaaacaag gatggataaa aggcggcatg gaaaaatcca ggcgcgggat
      661 gtggaagctg acgcgcaata tggaaaatat tgccgttacc cggtttttca gtatccgcat
      721 cagtgaaaaa atgcggctgt tcatccttga gccacatacg ggtaagacac atcagttgag
      781 ggtggtaatg aagagtctgg gcagctctat atttggggac agcctgtatg gaggaacaga
      841 atccgaaact atgttcctgt atgcgtgaaa aatacaattt acctatcaac aacaagaaat
      901 cgaaattacc gcacctttga aaaatgcatg gcaggccgaa aatatctctc atgcactgga
      961 agaattttat atggcaaaag caggttaata gatata
//
LOCUS       DAWXHA010000198          991 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.198, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000198 DAWXHA010000000
VERSION     DAWXHA010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.198"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(243..980)
                     /locus_tag="AABD07_002098"
     CDS             complement(243..980)
                     /locus_tag="AABD07_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356547.1"
                     /translation="MRYACNQELINFAEHIVKQVQRLGLYCNTDDPENGESVLFACRE
                     ASQAVAQWTKDFDDLSPNQRQLVLRPLSNLFAAYEEFLKDAPARLIAEVSAYSLAVRV
                     AKKAMAFLELDGGLISAVGKVVNGADSRAEARRLKMPYAEFTGRILHAANLLYDVGIQ
                     ADKELSAMYGKPLNPVRPRRISDVRRPMMKMLVADKGGALVRAVKDSEDVIRHCDNGA
                     GFSCFNWTEHFKRTANLISLMHREAAA"
BASE COUNT          165 a          291 c          294 g          241 t
ORIGIN      
        1 gtagccgccg gcttttttac ggttgttgtg tccttgaaac gtcatgggtt ttcgtccgtt
       61 ctctggcttg tccgggtgtg gcggagcgtt tgcggatgcg gctgacgcgt tgcggtttgc
      121 cgtcttcgcc gcgctgaaaa acgcttgttc cgccgcgccg gcagccgtgc cgcttatgcc
      181 tgatgccgtg tttgagcctt ttgtgccgga atcgtgatac acgcaggtcc ggatgtgcgt
      241 cctcatgccg ccgcttccct gtgcatgagg ctgatcaggt ttgccgtccg cttgaaatgt
      301 tcggtccagt tgaagcagct gaagccggcg ccgttgtcgc aatgccggat gacgtcttcc
      361 gagtctttta cggcccggac caacgcgccg cctttgtccg caacaagcat tttcatcatc
      421 ggccggcgca cgtcgcttat ccgtcggggg cgcacgggat tcagcggctt gccgtacatc
      481 gccgaaagct ccttgtccgc ctgaatgccc acatcgtaaa gcaggttcgc ggcgtgtagg
      541 atccggcctg taaattccgc gtacggcatt ttaaggcggc gggcttccgc gcgcgaatcc
      601 gcgccgttga cgactttgcc gaccgccgaa atcaaaccgc cgtcaagttc taaaaacgcc
      661 atggctttct tggcaacccg cacggccaat gagtatgccg atacttcggc tatcagccgt
      721 gcaggcgcgt ctttcagaaa ttcttcgtac gcggcgaaga gatttgacag cggacgcagc
      781 acgagttggc gctgattcgg gctaaggtcg tcgaaatcct tagtccattg cgcgaccgcc
      841 tgcgatgctt cgcggcaggc aaacagtacg ctttccccgt tctcggggtc gtccgtgttg
      901 cagtacaggc ccaagcgttg cacctgtttg acgatatgct cggcgaagtt gattaactcc
      961 tgattgcagg catagcgcat atcctgcagg g
//
LOCUS       DAWXHA010000199          981 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.199, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000199 DAWXHA010000000
VERSION     DAWXHA010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.199"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            112..327
                     /locus_tag="AABD07_002099"
                     /pseudo
     CDS             112..327
                     /locus_tag="AABD07_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038789.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            699..>981
                     /locus_tag="AABD07_002100"
     CDS             699..>981
                     /locus_tag="AABD07_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFB2356548.1"
                     /translation="MNTFFRQTAQAMTAKHIGRFPLSELDQVIDWQPIEQYLNRQKTR
                     YLRDRRGRPAHPLSSMFKAVLPGQWHSLSDPELEHSLITRIGFNLFCRFD"
BASE COUNT          276 a          248 c          191 g          266 t
ORIGIN      
        1 ttcgatatgt ccaatcctac ggtgttacgc atgggattac ccttatatat tgcgtcccta
       61 agaaggggcg attaacaaaa attaatgccc tttcttaggg acgcaatata taaggtttat
      121 accgtcgttg tccctaatgc gcaatcagcg acattgttgc caattatccg aaagaaagtt
      181 aagcctgatg gcattgtata cacggatacc tttcgtagtt atgatgtgct tgatgttagt
      241 gaatttagcc atttacgtaa gtttaacggc attcccaaag agcatttggg gctatattta
      301 aagaaatgcc aatggcattt gaaatagaat ctcaaattta gattttaaga caattagtta
      361 atgggaattt ggtctggtta tctagtacaa ccccaaaagt ttttatataa aaacagtttg
      421 gtaagttctc ttcgtgaagt gcttatgttt tgccacaaaa gttccataat catggcggca
      481 tcacccaagc tccatccttc caagaaaatg gcatctttgt tgtggttgaa aatcgactcc
      541 atacgatttt ggacaagcat agggatagat gttctgaaaa acggcagcgc gggcattctc
      601 caaccacctt cccaaatctt ataatacaaa cccgaagacc tttgcaaaat tcccctaaaa
      661 tcccctaaat tcccaccaag gcatttaggg gatttcccat gaacaccttc ttccggcaaa
      721 ccgcacaagc catgactgcc aaacacatcg gccgcttccc gctatcggag ttggaccagg
      781 tgattgattg gcagccgatc gaacaatacc tgaaccgtca aaaaacccgt tacctccgag
      841 accgccgcgg ccgtcccgcc catcccctgt cgtccatgtt caaagccgtc ctgcccggac
      901 aatggcacag cctctccgat cccgaactcg aacacagcct catcacccgc atcggtttca
      961 acctgttttg ccgttttgac g
//
LOCUS       DAWXHA010000200          944 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.200, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000200 DAWXHA010000000
VERSION     DAWXHA010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.200"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            106..735
                     /locus_tag="AABD07_002101"
     CDS             106..735
                     /locus_tag="AABD07_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pretoxin"
                     /protein_id="HFB2356549.1"
                     /translation="MVKTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTARYGNPYQ
                     ETVYIEISDGIGNSQTLISNRIHPFYSGGKWIKAEDLKAGSRLLSESGRTQTVRNTVV
                     KPKPLKAYNLTVADWHTYFVKGNQAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESKIAELTNKIIPGMSKNERLKIKQKIKNIAKNANRKTKGEEHGRRGR"
     gene            716..>944
                     /locus_tag="AABD07_002102"
     CDS             716..>944
                     /locus_tag="AABD07_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356550.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITQYKNILETFMYEPPDEF
                     GTEYYESPDSNLLISVKKNKIISIFCYQELYF"
BASE COUNT          324 a          211 c          181 g          228 t
ORIGIN      
        1 gaaatcgtgt ttaattttca gacgacctat ttccttcatt tgaaacagga tattgaaaac
       61 taagttcttc aaaaatccta cacctgctcc ttccacggca gcaccttggt caaaacggca
      121 gacggctaca aagccattgc ccatattcaa gccggcgacc gcgtcttcgc caaagatgaa
      181 accagtggaa aaactggata caaacctgtt accgcccgat acggcaatcc gtaccaggaa
      241 accgtttaca ttgaaatttc agacggcatc ggtaacagcc aaaccctgat ttccaaccgc
      301 atccatccgt tttattcggg cggcaaatgg attaaagcgg aagatttaaa ggcgggaagc
      361 agactgttat ccgaaagcgg cagaacccaa accgtccgca acaccgttgt caaaccaaaa
      421 ccgctcaaag cctacaatct gaccgttgcc gactggcata cttacttcgt caagggtaat
      481 caggcggaaa cggaaggggt ttgggttcat aattcttgtc cgcctaaaag aacaggaagc
      541 tccaagaatg aaaaacatgg agacggcggt cgaagtcaaa tatcagcgga atcaaaaatt
      601 gctgaattaa caaataaaat tattcccgga atgtccaaaa atgaacgctt aaagattaag
      661 caaaaaatca aaaatattgc caaaaatgcc aatcgaaaaa caaaaggaga agagcatggt
      721 cgacgcggtc gttaaaactc ccgaattttt accttttact tctgtaggaa tattccgttt
      781 tggtgctgat ataacacagt acaaaaacat actggaaact tttatgtatg aacctcctga
      841 tgagtttgga acagaatatt atgaatctcc cgactcaaat ttactcattt ccgtcaaaaa
      901 aaacaaaatt atttcgatat tttgttatca ggagctatat ttta
//
LOCUS       DAWXHA010000201          942 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.201, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000201 DAWXHA010000000
VERSION     DAWXHA010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.201"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..380)
                     /locus_tag="AABD07_002103"
     CDS             complement(<1..380)
                     /locus_tag="AABD07_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HFB2356551.1"
                     /translation="MNSFIKSTPIVLILILCSSNSYSEPVRLEKSQIKFQSSNNLKSI
                     GFKLDSSSNSFSKFTEAANFEHIPTGAKARINAKITASVSRAGVLSGVGKLVRQGAKF
                     GTRAVPYVGTALLAHDVYETFKED"
     gene            complement(322..639)
                     /locus_tag="AABD07_002104"
     CDS             complement(322..639)
                     /locus_tag="AABD07_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 domain-containing protein"
                     /protein_id="HFB2356552.1"
                     /translation="MNKPFITQAQLALYKYQPSSEYFGQSMAFIAQKEFEEFVNNVKE
                     YDILESFSYFLNKRVAHNIWKIYFSDESVIFIRKSEENGKTVHEFVYQEYTDSSDFNS
                     MFE"
BASE COUNT          267 a          207 c          185 g          283 t
ORIGIN      
        1 atgtcttctt tgaaagtttc gtatacgtcg tgggctaaaa gggctgttcc gacataggga
       61 accgcccttg tgccgaattt cgcgccttgg cggacaagtt tgccgacccc cgacaatacg
      121 ccggcgcggg atacgctggc ggttattttg gcgttgattc gggcttttgc gcccgtgggg
      181 atgtgctcga aatttgccgc ttctgtgaat ttggaaaaac tgttagaact tgaatctaat
      241 ttaaaaccaa ttgattttaa attattactt gattgaaatt taatttgtga tttttctaat
      301 cttacaggtt cagaataaga attactcgaa catagaatta aaatcagaac tatcggtgta
      361 ctcttgataa acgaattcat gaacagtttt tccgttctct tctgattttc ttataaaaat
      421 aacagactca tcagaaaaat aaatcttcca aatattatgt gcgaccctct tatttaagaa
      481 ataagagaag ctctctaaaa tatcgtactc ttttacgtta ttaacaaatt cttcaaattc
      541 tttctgagca ataaaagcca tcgattgccc aaaatactcg cttgacggct gatatttata
      601 aagtgccaac tgcgcctgcg tgataaacgg cttgttcatg gttctgcctt tcaaaggttg
      661 ttttgaaagc ctgattttga caccataact tcatgcgctc aatccttaaa cagaaccgcc
      721 ccgattaata cggggacggc aacgccgaga tagaaataaa aatccatcat ttcaaaacct
      781 ttttcagcag ggaaacaaag taaacggacg cgaggacgcc gaatactatc cggcctgttt
      841 caagaccgct ttgcaggttg tctttcggac tgcattccgc caatgaaagc cttagcggct
      901 gaccgtccga catcttccac atgctgccgt tatattccgg cc
//
LOCUS       DAWXHA010000202          936 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.202, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000202 DAWXHA010000000
VERSION     DAWXHA010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.202"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            89..>936
                     /gene="mafA"
                     /locus_tag="AABD07_002105"
     CDS             89..>936
                     /gene="mafA"
                     /locus_tag="AABD07_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFB2356553.1"
                     /translation="MRARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPALSRTQSDGSGSRSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIR"
BASE COUNT          269 a          227 c          206 g          234 t
ORIGIN      
        1 aaaatcgagt ttatcctagt tgtccaggac ggcccctaat ttatttacaa ttttgataca
       61 atttgttttt catcaaagga gaaaatctat gcgggcacgg ctgctgatac ctattctttt
      121 ttcagttttt attttatccg cctgcgggac actgacaggt attccatcgc atggcggagg
      181 caaacgcttc gcggtcgaac aagaacttgt ggccgcttct gccagagctg ccgttaaaga
      241 catggattta caggcattac acggacgaaa agttgcattg tacattgcaa ctatgggcga
      301 ccaaggttca ggcagtttga cagggggtcg ctactccatt gatgcactga ttcgcggcga
      361 atacataaac agccctgccg tccgtaccga ttacacctat ccgcgttacg aaaccaccgc
      421 tgaaacaaca tcaggcggtt tgacaggttt aaccacttct ttatctacac ttaatgcccc
      481 tgcactctcg cgcacccaat cagacggtag cggaagtagg agcagtctgg gcttaaatat
      541 tggcgggatg ggggattatc gaaatgaaac cttgacgacc aacccgcgcg acactgcctt
      601 tctttcccac ttggtacaga ccgtattttt cctgcgcggc atagacgttg tttctcctgc
      661 caatgccgat acagatgtgt ttattaacat cgacgtattc ggaacgatac gcaacagaac
      721 cgaaatgcac ctatacaatg ccgaaacact gaaagcccaa acaaaactgg aatatttcgc
      781 agtagacaga accaataaaa aattgctcat caaacccaaa accaatgcgt ttgaagctgc
      841 ctataaagaa aattacgcat tgtggatggg gccgtataaa gtaagcaaag gaatcaaacc
      901 gacggaagga ttaatggtcg atttctccga tatccg
//
LOCUS       DAWXHA010000203          886 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.203, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000203 DAWXHA010000000
VERSION     DAWXHA010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.203"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            178..738
                     /locus_tag="AABD07_002106"
     CDS             178..738
                     /locus_tag="AABD07_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HFB2356554.1"
                     /translation="MKKIIFAALAAAAVGTASATYKVDEYHANVRFAIDHFNTSTNVG
                     GFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTGHLKSADIFDAAQYPDIRFVS
                     TKFNFNGKKLVSVDGNLTMRGKTAPVKLKAEKFNCYQSPMAETEVCGGDFSTTIDRTK
                     WGVDYLVNAGMTKNVRIDIQIEAAKQ"
BASE COUNT          249 a          295 c          186 g          156 t
ORIGIN      
        1 aatctggtac agacccaaaa acaaagcacg gataacaccg cgctttttca tccgccctgt
       61 tccgcccgcc cgttcgtcaa ccgcctgcaa acccaccgtt taccggcagg aaatgccata
      121 aatccccgcc tatgttagga taaacgcctt taccggccca cacaaaggat tatcatcatg
      181 aaaaaaatca tcttcgccgc gctcgcagcg gcagccgtcg gcactgcctc cgccacctac
      241 aaagtggacg aatatcacgc caacgtccgt ttcgccatcg accacttcaa caccagcacc
      301 aacgtcggcg gtttttacgg tctgaccggt tccgtcgagt tcgatcaagc aaaacgcgac
      361 ggcaaaatcg acatcaccat tcccgtcgcc aacctgcaaa gcggttcgca acacttcacc
      421 ggccacctga aatccgccga catcttcgat gccgctcaat atccggacat ccgcttcgtt
      481 tccaccaaat tcaacttcaa cggcaaaaaa cttgtttccg ttgacggcaa cctgaccatg
      541 cgcggcaaaa ccgcccccgt caaactcaaa gccgaaaaat tcaactgcta ccaaagcccg
      601 atggcggaaa ccgaagtttg cggcggcgac ttcagcacca ccatcgaccg caccaaatgg
      661 ggcgtggact acctcgttaa cgccggtatg accaaaaacg tccgcatcga catccaaatc
      721 gaagctgcaa aacaataagc cttgatgcga atcagcacaa atgccgtctt catcaaaccg
      781 ccctgccaac cgtaagccga tatggcggag cacaacccgc cgaaagatat tttggcggca
      841 ggcggggctt gccggaaagt ccggaaagta acgaccgaaa acaacg
//
LOCUS       DAWXHA010000204          842 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.204, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000204 DAWXHA010000000
VERSION     DAWXHA010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 842)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.204"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          203 a          220 c          242 g          177 t
ORIGIN      
        1 tgggagaggg ctggagagag ggcaacaagc cgcaaggctt gtatttaggc ggttgagttg
       61 ttgggaaagg ttgccgcaac ttggagaatg ccctctcccc ggccctcccc cacgggggag
      121 ggagcggatt gcggcaggtt ttgcggttgc aggcggtttg aaaaacagat tggatttaca
      181 accgttgatt tcaggtcgtc tgaaaaataa aaagcaacct gcacaacctg ttttccttgc
      241 agcaaacctc aaccccaaca gccgacccgt cctctctccc cgtgggagag ggctggagag
      301 agggcaacaa gccgcaaggc ttgtattggg gcggttaagc tgttgggaaa ggttgccgca
      361 acttggagaa tgccctctcc ccggccctcc cccacggggg agggagcgga ttgcggcaga
      421 ttttgcggtt gcaggcggtt tgaaaaacag attggattta caaccgttga tttcaggtcg
      481 tctgaaaagc aaaaagcagc ctgcacaacc tgattagttt acaaaaccct taaccccaac
      541 agcctccccg tcctctctcc ccgtgggaga gggctggaga gagggcaaca agccgcaagg
      601 cttgtattgg ggcggcgaag gtattaggaa agattgccac cattcggaga atgccctctc
      661 cccagccctc ccccacgggg gagggagcgg attgcggcag atttttcggt tgcaggcgat
      721 ttgaaaggca acttagattt gcagctgttg tttcaggtcg tctgaaaaat aaaaagcagc
      781 ctgcacaacc tgattagttt acaaaaccct taaccccaac agccgacccg tcctctctcc
      841 ct
//
LOCUS       DAWXHA010000205          840 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.205, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000205 DAWXHA010000000
VERSION     DAWXHA010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.205"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            102..542
                     /locus_tag="AABD07_002107"
     CDS             102..542
                     /locus_tag="AABD07_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB"
                     /protein_id="HFB2356555.1"
                     /translation="MAGKNKPPKPSTQQHSTHSDNNIGLPAPYVKPDTSISPTGTIQD
                     RIRWTKSKFPTEKSLNGHFKAHGKEFGDITIEDYQKMASDLLSKQTSDKILGYQTEHR
                     RVRYDINNNIYVLANPKTFKIKTMFKPNLGKEYYDGEFKKDMGN"
     gene            508..714
                     /locus_tag="AABD07_002108"
     CDS             508..714
                     /locus_tag="AABD07_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356556.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
BASE COUNT          317 a          156 c          166 g          201 t
ORIGIN      
        1 gcggtaaaaa agtagaactt aacccggcca aatgggattg ggttaaaaat accggctata
       61 aaaaacctgc tgcccgacct atgcagactg tagacgggga aatggccggg aaaaataagc
      121 caccgaaacc aagtacgcag caacactcta cacactctga taacaatatc ggcttacctg
      181 ccccatatgt taaacctgat acatctattt ctccgacagg aacaattcaa gaccgcatca
      241 gatggacaaa atccaagttt cctactgaga aatctttaaa tggacatttc aaagctcatg
      301 gaaaagaatt tggcgatata accattgaag actaccaaaa aatggcgtct gatttgttat
      361 caaaacagac atcggacaag atattaggtt atcagacgga acatagacga gtgcgctatg
      421 atatcaataa caatatctat gttttggcca atccaaaaac attcaaaatc aaaacaatgt
      481 ttaaaccaaa cttaggaaag gagtattatg atggagaatt caaaaaagac atgggaaatt
      541 gacggagaaa tatggctaca ttgtcctgtt tgcggaactg aagttatgga ctatgatatc
      601 tgtgacgttt gtcagtggca aaatacagga gaaactaata tagatggtgg tcctaatgaa
      661 atgacacttg cggaggcgaa agaagcttac gcaaaaggct taccaatcag ataaataagc
      721 acctagagaa accaatgatg acggaatccc atggttaccc atcaaataat ttacctgtta
      781 aaatcataaa tgatattatt tatgcaaccc agttagtcga agatttggtt ttaggaaaaa
//
LOCUS       DAWXHA010000206          778 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.206, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000206 DAWXHA010000000
VERSION     DAWXHA010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.206"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            129..740
                     /locus_tag="AABD07_002109"
                     /pseudo
     CDS             129..740
                     /locus_tag="AABD07_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253822.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
BASE COUNT          270 a          150 c          174 g          184 t
ORIGIN      
        1 aaattagaga atgcatacgt gtcttttgtt ttgaaattta tctaacaaag gaagcacaag
       61 aataggttta tagtaaaaca tcaagatgtt gaaaatgcta ggttttaacc taacctacgc
      121 tgaccggatc agatacagcc gctcagcaga ctctacaagg tattaatgat ttaggaaatt
      181 taagtccgga agcacaactt gccgccgcga gcctattaca ggacagtgcc tttgcggtaa
      241 aagacggcat caattccgcc agacaatggg ctgatgccca tccgaatata actgcaacag
      301 cccaaactgc ccttgccgta gcagaggccg caggtacggt ttggagaggt aaaaaagtag
      361 aacttaaccc gactaaatgg gattgggtta aaaataccgg ctataaaaaa cctgctgccc
      421 gccatatgca gactttagat ggggagatgg caggaggaaa caagccagtt gttaaatcta
      481 ttagaccaac tacgcgagat gaattacgtc aagcattgca agaacaaggt tttagacgta
      541 ctggttcaga tgcggctcaa tatgaaacat ggaaaggtcc tgatggcgtg aaaatagata
      601 ttcgtccaaa tggagaggtt ataagaaccc aaagagtgcc gcgaaccgat ggtgtacagg
      661 gaaaatatcc gcaacgacaa gattatgaag gcaatccatt gccaaataat catcatcatt
      721 ctggatattt tgtcaaatga aaaaaaatat ttttcacaat gtaagccttt atgaaata
//
LOCUS       DAWXHA010000207          772 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.207, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000207 DAWXHA010000000
VERSION     DAWXHA010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.207"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            123..>772
                     /locus_tag="AABD07_002110"
     CDS             123..>772
                     /locus_tag="AABD07_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356557.1"
                     /translation="MAEGQKSAVTEYYLNNGKWPEDNGNAGVASSSSIKGKYVKEVEV
                     KNGVVTAEMKSDGVNKEIKGKRLSLWARRENGSVKWFCGQPVKRDDAAAKAGTDAVTA
                     DTTGTKIETKHLPSTCRDESSAVCTKHLTPISNTFAVAGYCPNHGIWPENNDKAGVAS
                     PSDIKGKYVESVTVAKGVVTAKMKSDGVNKEIQGKRLSLWAKRENGSVKWFCGQPV"
BASE COUNT          229 a          214 c          193 g          136 t
ORIGIN      
        1 tcccgtcatt cccgcgaaag cgggaatccg gaacgtaaaa tctaaagaaa ccgttttccc
       61 gataagtttc cgtgccgaca gacccggatt cccgcctgcg cgggaatgac gaagccatcc
      121 ttttggccga aggtcaaaaa tcagccgtta ccgagtatta cctgaataac ggcaaatggc
      181 cggaagacaa cggtaatgcc ggcgtggcat cttcttcatc aatcaaaggc aaatatgtta
      241 aagaggttga agttaaaaat ggcgtcgtta ccgccgaaat gaaatcagac ggcgtaaaca
      301 aagaaatcaa aggcaaaaga ctctccctgt gggccaggcg tgaaaacggt tcggtaaaat
      361 ggttctgcgg acagccggtt aagcgcgacg acgccgccgc caaagccggc accgacgccg
      421 tcaccgccga caccaccggc accaaaatcg aaaccaagca cctgccgtca acctgccgcg
      481 atgaatcatc tgccgtttgc acgaaacacc tcacgccgat ttcaaatact ttcgccgttg
      541 ccgggtattg cccgaatcac ggcatatggc cggaaaacaa cgacaaggcc ggcgtggcat
      601 ccccctccga catcaaaggc aaatatgttg aaagcgttac ggtcgcaaaa ggcgtcgtta
      661 ccgccaaaat gaaatcagac ggcgtaaaca aagaaatcca aggcaaaaga ctctccctgt
      721 gggccaagcg tgaaaacggt tcggtaaaat ggttctgcgg acagccggtt ca
//
LOCUS       DAWXHA010000208          771 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.208, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000208 DAWXHA010000000
VERSION     DAWXHA010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.208"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          148 a          230 c          215 g          178 t
ORIGIN      
        1 ggtatggcgg aaaacccgcc tttttaaagt tttattcatc gtatttcctt ttcggtcaaa
       61 ccccccgccc ttcgggcatc cgtccttcgg ggcggcagga tcaggctttg tccgggaggg
      121 gtgcaagccc ttccgaatca gggcggcgcc ttatgtgccg ccctgcgtgt tggaacatat
      181 tttatccctt aaatcttgct tcgcgggata ccgtcggcgg caggcgcgcc gcaaacggcg
      241 ggattcggca aaccgcccga tcccgcgccc gccggattgc cggttgcaaa gcccccttcg
      301 cccggctgcc aaagggggat gttcgcaaag gtaacacgcc cctttggccg gatgcaatgt
      361 atagggttac cgcattattc tacccttgcg cgcttatcca tggtacagcg gtttttggca
      421 atccgcaacc gtttgcccgg cccgccattg ccgcgaaagt gggaatccgg aacgtaaaat
      481 ctcaaaaaac cgttttatcc ggcaagtttg cgcaccggca ggcccgccat tgccgcctgc
      541 gcggcaatgg cgggccgggg aggcggcatt ctccaagttg cggcaacctt tcccaacagc
      601 ttaaccgccc caatacaagc cttgcggctt gttgccctct ctctagccct ctcccacagg
      661 gagagaggac gggtcggctg ttggggttga ggtttgctgc aaggaaaaca ggttgtgcag
      721 gttgcttttt atttttcaga cgacctgaaa caacagctgc aaatctaagt t
//
LOCUS       DAWXHA010000209          762 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.209, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000209 DAWXHA010000000
VERSION     DAWXHA010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.209"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            68..622
                     /locus_tag="AABD07_002111"
     CDS             68..622
                     /locus_tag="AABD07_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HFB2356558.1"
                     /translation="MFCQKKSRKDIINIYLGQFLGSVSLILLSLLFAFVLDYIPSKEI
                     LGLLGLIPIFLGLKVLLLGDSDGESIAKEGLRKDNKNLIFLVAMITFASCGADNIGVF
                     VPYFTTLNLANLIVALLTFLVMIYLLVFSAQKLAQVPSVGETLEKYSRWFVAVVYLGL
                     GIYILIENNSFDMLWTVSGQEKIL"
BASE COUNT          197 a          133 c          151 g          281 t
ORIGIN      
        1 aaaatgttgt tacttcaata atcctgtatt ctgggacagc cgtagactta cttattatcc
       61 taatgttatt ttttgccaaa aaaaaagcag aaaagacatc attaacatct atttaggaca
      121 atttctaggc tctgttagcc tgatattgct aagtttgctt tttgcatttg tcttagatta
      181 tattcctagt aaagagattt taggtttgct cggcttgatt ccgattttcc taggcctcaa
      241 agttttgctg ttaggagatt ccgatggaga gtctattgcc aaagagggtt tgcgcaaaga
      301 taataaaaac ctgatttttc tagtcgctat gattactttt gcaagttgtg gcgctgacaa
      361 tattggtgtc tttgtcccat attttactac cttaaattta gcgaatttga tagtggcttt
      421 acttaccttt ctagttatga tttatctctt ggttttttct gcccaaaaat tggcacaagt
      481 cccttctgtc ggagaaactt tggaaaaata tagcagatgg tttgttgccg ttgtttattt
      541 aggattgggg atatatatcc tgattgaaaa caacagtttt gatatgctat ggactgtgtc
      601 gggccaggaa aaaatattat gaaaaagata gtatctgcaa agactgcccc gtgcagtctt
      661 ttttgttgcc ggtctttttg tgtctgatgc cgtctgaagc agtctctgca cgacctttgt
      721 gcgaatattt gctacacttg gcaatccgtc catttcttct ca
//
LOCUS       DAWXHA010000210          762 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.210, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000210 DAWXHA010000000
VERSION     DAWXHA010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.210"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            67..426
                     /locus_tag="AABD07_002112"
     CDS             67..426
                     /locus_tag="AABD07_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356559.1"
                     /translation="MTRNIEHQFSNLSDVGEKLELENPTVENVVDILVDIGHDDRVYT
                     FHDDFLGLKSGLPQDLLSKHIDELEEGDFADRYSDEIDKILDNANIIFYHLERELSED
                     DLEEIREERERLGLEDD"
     gene            569..>762
                     /locus_tag="AABD07_002113"
     CDS             569..>762
                     /locus_tag="AABD07_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356560.1"
                     /translation="MTQKNDFKNANFYGNTQIVNGDVHNVHTQNTPNSINENEIATYT
                     PEPIWRSPITMAWLTWASFL"
BASE COUNT          282 a          108 c          143 g          229 t
ORIGIN      
        1 ttaatcgcaa tttctgaaaa cgagcaatca tgctcaattg taattacaca ttttaaggag
       61 tcgtaaatga caagaaatat agaacatcaa tttagcaatc tatctgatgt tggtgaaaaa
      121 ctagagttag aaaatcctac tgtagagaat gtcgtagata ttttagtgga tattggacat
      181 gatgaccgag tttatacttt tcatgatgac tttctcgggt taaaaagcgg tttgccacaa
      241 gacttattgt cgaaacatat cgacgagctt gaagaaggtg attttgcaga tagatattca
      301 gatgaaattg ataaaatact ggataatgca aatataatat tctatcacct tgaacgagag
      361 cttagtgaag atgatttaga ggaaatacga gaagaaagag aaagactggg tttagaagac
      421 gattagtata cttgttgtca tagaatagat tcaatacata caggttgggt tatgctgttt
      481 tacccaacca gctaacctca gggcatattt aatattattt aattctgaat aatattctat
      541 tgaagtttca agatatctaa ggaaaaacat gacacaaaaa aatgatttta aaaatgctaa
      601 tttttatggg aatactcaaa tagttaatgg tgatgttcat aatgtacata ctcaaaatac
      661 accaaattca ataaatgaaa acgaaatagc cacatacacc ccggaaccaa tttggagaag
      721 ccccattacg atggcttggc tgacatgggc tagttttctg at
//
LOCUS       DAWXHA010000211          749 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.211, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000211 DAWXHA010000000
VERSION     DAWXHA010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.211"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(160..>749)
                     /locus_tag="AABD07_002114"
     CDS             complement(160..>749)
                     /locus_tag="AABD07_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFB2356561.1"
                     /translation="AVFEDDVLLGEGAGQFLAEDTWLQERFDPDSAFVVRLETMFMHV
                     LTSPSGVADYGGRAFPLLESEHCGTAGYIISRKAMRFFLDRFAVLPPERLHPVDLMMF
                     GNPDDREGMPVCQLNPALCAQELHYAKFHDQNSALGSLIEHDRRLNRKQQWRDSPANT
                     FKHRLIRALTKIGREREKRRKRREQTIGKIIVPFQ"
BASE COUNT          152 a          208 c          217 g          172 t
ORIGIN      
        1 cggcaaccgc cgcccggttt gcctcactga tgccggcatc gaggacgtgg aacctgattt
       61 ccgtatcggg atgggccgct tccacgcttt ttgccgcaac gcaaagatag gcggcatagt
      121 tgtcgtctgc cgcaaatacg atgtccatct cttctccttt tattggaaag gcacaataat
      181 tttgccgatt gtctgttcgc gccttttccg gcgtttttcc ctttccctgc cgattttggt
      241 caaggcgcgg atcaggcggt gtttgaatgt gttggcgggg gaatcgcgcc attgctgttt
      301 gcggttcagg cggcggtcgt gttcgatcag gctgcccaat gcgctgtttt ggtcgtgaaa
      361 cttggcataa tgcagctctt gggcgcacaa ggcgggattg agctggcaaa ccggcattcc
      421 ttccctgtcg tcagggttgc cgaacatcat caaatcgaca gggtgcaggc gttcgggcgg
      481 caaaacggca aacctgtcca agaaaaaacg catcgccttt cgggaaataa tatagcccgc
      541 cgtcccgcag tgttcgcttt ccaaaagcgg aaaggcgcgc ccgccgtagt ccgccacgcc
      601 ggagggcgag gtcaggacgt gcataaacat cgtttccaag cggacgacaa aggcggaatc
      661 ggggtcaaag cgttcttgca gccaagtatc ttcggcaagg aactgccccg cgccttcgcc
      721 gagtaaaacg tcgtcctcaa atacggcga
//
LOCUS       DAWXHA010000212          746 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.212, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000212 DAWXHA010000000
VERSION     DAWXHA010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.212"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..422)
                     /locus_tag="AABD07_002115"
     CDS             complement(<1..422)
                     /locus_tag="AABD07_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFB2356562.1"
                     /translation="MAIELNGNWTKGFALDHHMQKSILLGYDELGHPHFDSKRSVIGE
                     WVYQLKYRNQTQNVSLLVDYILQKFSGLESINLIVPAPFTTERINQPVQLIAKELSDR
                     LNIPYSPILRKSSSHTPLKNIEEKSEKLEILNNSITID"
BASE COUNT          215 a          154 c          131 g          246 t
ORIGIN      
        1 ttgtcaattg tgatggaatt attcagtatt tctagttttt ctgatttttc ttcaatattt
       61 ttgagtggtg tgtgtgagct agattttctt aaaataggag aatatggaat attcaagcga
      121 tcacttagtt ctttggcaat taattgaact ggttgattaa tacgctctgt tgtaaaaggg
      181 gcgggaacaa ttaaatttat agattctaaa ccactaaatt tttgtaaaat atagtctacc
      241 agcaaagaaa cattttgggt ttgattacga tattttaatt gataaaccca ttctccaatc
      301 acacttctct tgctatcaaa gtgaggatgc cctaattcat cataacctaa caaaatactt
      361 ttttgcatat gatggtctaa agcaaatcct tttgtccagt taccatttag ttctatcgcc
      421 atttcattga ctccttgtca aaattaagta taacgagcaa tcctagcaag ccgtagcccg
      481 catgtagggt gtgcggtacg cacgcacgcg ttcttcattt tccctgtaac cccgacccac
      541 cgcatgcgcg ccttgcggca cacactctac cgatgagttc aaagattgtc tgaaaaaacg
      601 ctcgcggcgt ttgttccatc tgcttgacaa taaaggctac ctgaaaaatt cccgctgttg
      661 atatttcgtg catccttttt cagacgacct gaaatcaacg gttgcaaatt taagttattt
      721 ttcaaaccac cggcaaccga aaaatc
//
LOCUS       DAWXHA010000213          745 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.213, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000213 DAWXHA010000000
VERSION     DAWXHA010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.213"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            305..>745
                     /locus_tag="AABD07_002116"
     CDS             305..>745
                     /locus_tag="AABD07_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFB2356563.1"
                     /translation="MQTLDGEMAGGNKPAKQATPNGKAGVSTQQSLQNSLVPQKNYTH
                     TTYNGGSAITDGKYITDPLSMVRHKPDASSLDKIDSKSLFKSDVDVEKATLDAARYAD
                     KHNLWDSQNKAKVPTNDVVGYTDGKPTHIINIYRRKPNKDGIRPV"
BASE COUNT          260 a          154 c          162 g          169 t
ORIGIN      
        1 cccggtcaca gatacagccg ctcagcagac tctacaaggt attaatgatt taggaaaatt
       61 aagtccggaa gcacaacttg ctgccgcgag cctattacag gacagtgctt ttgcggtaaa
      121 agacggcatc aattccgcca gacaatgggc tgatgcccat ccgaatataa cagcaacagc
      181 ccaaactgcc cttgccgtag cagaggccgc aactacggtt tggagaggta aaaaagtaga
      241 acttaacccg actaaatggg attgggttaa aaataccggc tataaaaaac ctgctgcccg
      301 ccatatgcag actttagatg gggagatggc aggtgggaat aagccagcga agcaagctac
      361 tcctaatggc aaagctggcg tttctacaca acaatctttg caaaatagtc tcgttccaca
      421 aaaaaattat acgcatacta cctataatgg tggatcagct attacagatg gcaaatatat
      481 tactgaccct ctcagtatgg tacgacacaa acctgatgca tctagtctag acaagataga
      541 tagcaaaagt ttatttaaat cagatgttga tgtggaaaaa gctacattag atgctgctag
      601 atatgcagat aaacataatt tatgggatag tcaaaataag gcaaaagttc caacgaacga
      661 cgtagttggc tatacagacg gaaaaccgac acatataatt aacatttatc gtagaaagcc
      721 gaataaagat gggattagac ctgtg
//
LOCUS       DAWXHA010000214          732 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.214, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000214 DAWXHA010000000
VERSION     DAWXHA010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.214"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(33..723)
                     /locus_tag="AABD07_002117"
                     /pseudo
     CDS             complement(33..723)
                     /locus_tag="AABD07_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
BASE COUNT          233 a          140 c          131 g          228 t
ORIGIN      
        1 ctatataaaa taaatgggca aaaatcggtt tattatcgtt tttgccgcat ttggatttgt
       61 tctaccgtaa aacgtgtttg acgaacggga tttttattaa aaaacatctg atttctaaca
      121 aaatcagtat tttttggcac gatggctaaa atttttcctt ccatttcgcc atcacgtgtt
      181 ttccatgcgc tcaagaattg tgatttgctc gttgagacgt gccccagcga tggatcagcc
      241 agcaaaacag tttctccgtt aataccgttc aataccgaaa aatggttgtt tttacggtat
      301 tttaaataca caattacagg aatttttagt tgtaccaact gttcaaatgg caaagcataa
      361 ccttgtgctt caaaacccag ttcgggcatt atgcgttgca tatcatcaaa agaagtacgc
      421 atttgggttt tatccatttt gtctaagatt tccgcttcag aataatgtct gccataaaaa
      481 ttattcagta acgtggcaat cgaagccgcg ccgcaagaaa aatccaaatc ttgttttact
      541 atgccggaat ctcgccgtgc tttccaactc cgtacatgga tgttttggta agaagcgggg
      601 gtcaacaaac ataggccaag caaaaactat atttggggcg aaaccaatca aagccgcata
      661 atttatcaat ttataaagat tttttatcat aatatgtata cgcggaataa acgcatgaaa
      721 cataaaaaaa ta
//
LOCUS       DAWXHA010000215          718 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.215, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000215 DAWXHA010000000
VERSION     DAWXHA010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.215"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            41..343
                     /locus_tag="AABD07_002118"
     CDS             41..343
                     /locus_tag="AABD07_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356564.1"
                     /translation="MKTVPTILTGILLATALPASAHGMHKSKPLAMDELPPICQQYFK
                     RAETCYNKAGNKADFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRNLNCE"
BASE COUNT          230 a          184 c          136 g          168 t
ORIGIN      
        1 atataatctt tagtttttta ccctacggaa agacaataat atgaaaactg ttccaaccat
       61 cctgaccggc atccttttgg caaccgccct tcccgcatcc gcacacggta tgcataagag
      121 caaacccctg gctatggacg agctgccgcc gatttgccaa caatatttca aacgcgccga
      181 aacctgttac aacaaagccg gaaacaaagc agattttgca cgcaacaaca ccaaattcct
      241 attccaagcc ctacctgccg ccgatttggg acagcgtaaa caaatgtgcc aaatcgctat
      301 ggattcgttt gcagaaaaaa cccgcaatct gaattgcgaa taaagccgca tcagcaatag
      361 caatgccgtc tgaaacaaag gttcagacgg cattctcaca tcaaaacgta ccggctgata
      421 aaacccgcct tccccgcatc cctgacccga acaggattaa acggagtaac ggtttcggcc
      481 attatggcaa gtccccatcc caaaaatgac catataaatt aataccataa aacattgata
      541 aaaagcgtct gccggttgcg gtttgttgca gggcgttacg gaaaatcatc ttaaaccgat
      601 gatttttata tagtaattga cacaacctga acaaaaaaga accgccctga atcagggcgg
      661 ttttgctttg cggcggaaac ggcaggattc gactaaattt tattttattg atttaaat
//
LOCUS       DAWXHA010000216          716 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.216, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000216 DAWXHA010000000
VERSION     DAWXHA010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.216"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            97..435
                     /locus_tag="AABD07_002119"
                     /pseudo
     CDS             97..435
                     /locus_tag="AABD07_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            557..691
                     /locus_tag="AABD07_002120"
     CDS             557..691
                     /locus_tag="AABD07_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB"
                     /protein_id="HFB2356565.1"
                     /translation="MSDTKNGWLAKDGWVKRVQNINKVEIHYIENTRTGEKTDFKFKD
                     "
BASE COUNT          249 a          142 c          161 g          164 t
ORIGIN      
        1 attaattttg agccactggg aaaatagtaa ctgctttccc agcagccgta gcaactgtat
       61 ttttacccga cggggtaaaa atacagttgc tacatctctg cgcagcagac tctacaaggt
      121 attaataatt caggaaaatt aagtccggaa gcacaacttg ccgccgtgag cctattacag
      181 gacagtgctt ttgcggtaaa agacggtatc aactctgcca gacaatgggc tgatgcccat
      241 ccgaacatta cagctactgc ccaaactgcc cttgccgtag cagaggccgc aggtacggtt
      301 tggagaggta aaaaagtaga acttaacccg actaaatggg attgagttaa agataccggc
      361 tatgaaaaac ctactgcccg ccatatgcag actgtagaca gggaaatggc tggggggaaa
      421 caaatcatta aaaataggga cacaatctgt tgaaaaatca accggtcgta caatacctaa
      481 taatttaaag gaacaattag caatggaaga agttaaggca aacccacagg gcaaaactcc
      541 tgcgagaata cctcctatgt ccgatactaa aaatggttgg ttggcaaaag acggctgggt
      601 taagcgcgtt caaaatataa acaaagttga gatacattac attgaaaata caagaaccgg
      661 tgagaaaaca gatttcaagt ttaaggatta gccatgtttt tagatgatgt aaatgt
//
LOCUS       DAWXHA010000217          712 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.217, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000217 DAWXHA010000000
VERSION     DAWXHA010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.217"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            7..>712
                     /locus_tag="AABD07_002121"
     CDS             7..>712
                     /locus_tag="AABD07_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFB2356566.1"
                     /translation="MEKDRSIIAMGAWLEILSEEKDGNRLARHHKHGKIWKKPTRHED
                     IAAFFPFGNPIHNNTMIMRRSVIDGGLRYNTGRDWAEDYQFWYDVSKLGRLAYYPEAL
                     VKYRLHANQVSSKHSVRQHEIAQGIQKTARNDFLQSMGFKTRFDSLEYRQTKAAAYEL
                     PEKDLPEEDFERARRFLYRCFKRTDTPPSGAWLDFAADGRMRRLFTLRQYFGILYRLI
                     KNRRQARSDSAGKEQEI"
BASE COUNT          189 a          186 c          200 g          137 t
ORIGIN      
        1 ggcgagatgg aaaaagaccg cagcatcatc gcgatgggcg cgtggctgga aattttgtcg
       61 gaagaaaagg acggcaaccg gctggcgcgg catcacaaac acggcaaaat ttggaaaaag
      121 ccgacccggc acgaagacat cgccgccttt ttccctttcg gcaaccccat acacaacaac
      181 acgatgatta tgcggcgcag cgtcattgac ggcggtttgc gttacaacac cgggcgggat
      241 tgggcggaag attaccaatt ttggtacgat gtcagcaaat tgggcaggct ggcttattat
      301 cccgaagcct tggtcaaata ccgccttcac gccaatcagg tttcatccaa acacagcgtc
      361 cgccaacacg aaatcgcgca aggcatccaa aaaaccgcca gaaacgattt tttgcagtct
      421 atgggtttta aaacccggtt cgacagccta gaataccgcc aaacaaaagc agcggcgtac
      481 gaattgccgg agaaggattt gccggaagaa gattttgaac gcgcccgccg gtttttgtac
      541 cgatgcttca aacggacgga cacgccgccc tccggcgcgt ggctggattt cgcggcagac
      601 ggcaggatga ggcggctgtt taccttgagg caatacttcg gcattttgta ccggctgatt
      661 aaaaaccgcc ggcaggcgcg gtcggattcg gcagggaaag aacaggagat tt
//
LOCUS       DAWXHA010000218          707 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.218, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000218 DAWXHA010000000
VERSION     DAWXHA010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.218"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            10..690
                     /locus_tag="AABD07_002122"
     CDS             10..690
                     /locus_tag="AABD07_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HFB2356567.1"
                     /translation="MEKDRSIIAMGAWLEVLSEENNKSVLAAIARNGAIWDKPTRHED
                     IVAVFPFGNPIHNNTMIMRRSVIDGGLRFDPAYIHAEDYKFWYEAGKLGRLAYYPEAL
                     VKYRFHQDQTSSKYNLQQRRTAWKIKEEIRAGYWKAAGISVGADCLNYGLLKSTAYAL
                     YEKALSGQDIGCLRLFLYEYFLSLEKYSLTDLLDFLTDRVMRKLFAAPQYRKILKKML
                     RPWKYRSY"
BASE COUNT          195 a          167 c          187 g          158 t
ORIGIN      
        1 gtgggcgaga tggaaaaaga ccgcagcatc attgcgatgg gcgcgtggtt ggaagttttg
       61 tcggaagaaa acaataaaag cgtgcttgcc gccattgccc gaaacggcgc aatttgggac
      121 aaaccgaccc ggcatgaaga cattgtcgcc gttttccctt tcggcaaccc catacacaac
      181 aacacgatga ttatgaggcg cagcgtcatt gacggcggtt tgcggttcga tccagcctat
      241 atccacgccg aagactataa gttttggtac gaagccggca aactgggcag gctggcttat
      301 tatcccgaag ccttggtcaa ataccgcttc catcaagacc agacttcttc caaatacaac
      361 ctgcaacagc gcaggacggc gtggaaaatc aaagaagaaa tcagggcggg gtattggaag
      421 gcggcaggca tatccgtcgg ggcggactgc ctgaattacg ggcttttgaa atcaacggca
      481 tatgcgttgt acgaaaaagc cttgtccgga caggatatcg gatgcctccg cctgttcctg
      541 tacgaatatt tcttgtcgtt ggaaaagtat tctttgaccg atttgctgga tttcttgaca
      601 gaccgcgtga tgaggaagct gtttgccgca ccgcaatata ggaaaatcct gaaaaaaatg
      661 ttacgccctt ggaaataccg cagctattga aaccgaacag gataaat
//
LOCUS       DAWXHA010000219          703 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.219, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000219 DAWXHA010000000
VERSION     DAWXHA010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.219"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          212 a           98 c          170 g          223 t
ORIGIN      
        1 gcatggtgca tgcattaaat cagtcttcta gcgccgcaat gggaaaacat agaagataaa
       61 cgaaatggat gatctaatac tatatttttt atcaggtata ttcggaaatc aagttgctga
      121 atatattata aaaaacaacc gtgagataaa agttcccttt attgcgcttt acgctatatt
      181 ttttacgttg atttatactg tggctttgtt gtttctcagt ctgatctatt gggtcaatgg
      241 tgcggagatt gcatggaagg ggataggtat tttcagtatg tcggtcagtt tttgtatagt
      301 cttctgtctt tatttgattg acaaggcagg aagatgtaag gataagaaac aatagggatc
      361 agatgcggca gcaaacgtag attgggtcta ggctcaacct gcgtttgctg catctttgga
      421 agaaatagtg gattcgaaaa aataggaaga attctgatta atggtatgcg aggtgtagca
      481 gtgggggctg ttgctggtgg cataactggt tatgcaggtt ctacgggtaa gaacactgac
      541 attcgccgtt aaataataaa taaaccaact tccaaccaaa cctgctatcg gtttggttgg
      601 aagtgagagg aggtaaggta gtgtttgctg ttattttctt ttcgacattg ggctgtattt
      661 tagcatggat aagagatatt cctaaaataa aatcaaaaaa aat
//
LOCUS       DAWXHA010000220          702 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.220, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000220 DAWXHA010000000
VERSION     DAWXHA010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.220"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            111..335
                     /locus_tag="AABD07_002123"
     CDS             111..335
                     /locus_tag="AABD07_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356568.1"
                     /translation="MMKNKYILIKAAIGITAISIFYLLTQGSIGKTEEPSYFLMFMFL
                     NSLWFEENKTVMAAVTAMIAAHFIFVALSD"
     gene            391..>702
                     /locus_tag="AABD07_002124"
     CDS             391..>702
                     /locus_tag="AABD07_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HFB2356569.1"
                     /translation="MEQKRRFAASLLLAAALPLCAHSFPFAEENPIAYGKVKIQSWKA
                     RRDFNIVKQDLDFSCGAASVATLLNNFYGQKLTEEEVLEKLGKEQMRASFEDMRRIMP
                     DL"
BASE COUNT          207 a          148 c          148 g          199 t
ORIGIN      
        1 aatgccgtac cggtttaaat ttaatccact atatatttat ccgatatatc aacatctctc
       61 tatcttattc cgaattttat tgttgaaact tgcattaaaa accatacaag atgatgaaga
      121 acaaatatat tttaataaaa gcagcaatcg gcataaccgc catatccata ttttatcttc
      181 tgactcaagg aagcatcggc aaaactgaag aaccatcata tttcttgatg ttcatgtttc
      241 tcaactcgct ttggtttgaa gaaaataaaa cagttatggc tgccgttacg gcaatgattg
      301 ccgcccactt tatatttgtc gcactatccg attaataagc aaacaaaaag gctgcttgga
      361 aatttcaggc agcctttcag gaggatttta atggaacaaa aaaggcggtt tgccgcctcc
      421 ctgctcctcg ccgccgccct gccgctttgt gcacattctt ttccctttgc ggaagaaaac
      481 cccatagcct acggcaaagt caaaatacag agttggaaag cgcggcggga tttcaatatt
      541 gtaaagcagg atttggattt ttcctgcggg gcggcttcgg tggcgacact tttgaacaat
      601 ttttacgggc aaaagctgac ggaagaagaa gtgttggaaa aactgggtaa ggaacagatg
      661 cgcgcgtcgt ttgaggatat gcggcgcatt atgcccgatt tg
//
LOCUS       DAWXHA010000221          701 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.221, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000221 DAWXHA010000000
VERSION     DAWXHA010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.221"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            68..>701
                     /locus_tag="AABD07_002125"
     CDS             68..>701
                     /locus_tag="AABD07_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFB2356570.1"
                     /translation="MSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAE
                     DTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAA
                     RQAKMWEEPLDYEPSDFEPSDYEPSDFDAKNHQILSDEPSDFALRTVRFCAKNHQILS
                     DEPSDFDGSLYVEPSVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPE"
BASE COUNT          182 a          170 c          211 g          138 t
ORIGIN      
        1 gcatgaaggc gggcggccgc gggaagcctg ttacgcatta ttcgattgtc aaaaacggag
       61 cggaagtatg agtgcgaggc tgatggggat ggctttcaaa acgggtatcc cgagggggca
      121 gcgttttgtt ttggtgaagt tgtgcgactg cgccaacgac gagggcttgt gttatccgtc
      181 gcaagaaacg ctggcggaag atacgggctt cgccgaaacc gccgtacggc agcatatcaa
      241 gtggctgaag gataacaatt tcatcaagtc cgcccggcgg cagagggggc gggagaggaa
      301 gtccgacatc taccgcatca acgtcgccct gcttgaaaaa tgctatgcgg aggcggcaaa
      361 acggaaggcg gcgcggcagg caaaaatgtg ggaagaacca ttggattacg aaccttcgga
      421 ttttgaaccg tcggattacg aaccttcgga ttttgacgct aagaaccatc agattttgag
      481 cgatgaacca tcagattttg cgctaagaac cgtcagattt tgcgctaaga accatcagat
      541 tttgagcgat gaaccatcag attttgacgg ttccttatat gtagaaccgt cagtagaacc
      601 gtcagtagaa ccgtcagtag aaccgtcagg atcaaatgcg cgcggcgcgc gcgcccctgc
      661 cggaccgcac cctgcgaaac cgcaaacggc gcctcccgaa a
//
LOCUS       DAWXHA010000222          672 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.222, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000222 DAWXHA010000000
VERSION     DAWXHA010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.222"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            17..328
                     /gene="rpsJ"
                     /locus_tag="AABD07_002126"
     CDS             17..328
                     /gene="rpsJ"
                     /locus_tag="AABD07_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014235480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HFB2356571.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHMNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
BASE COUNT          210 a          137 c          146 g          179 t
ORIGIN      
        1 tgaaggatat tgataaatgg caaaccaaaa aatccgtatc cgcctgaaag cttatgatta
       61 cgccctgatt gaccgttctg cacaagaaat cgttgaaact gcaaaacgta ccggtgctgt
      121 tgtaaaaggc ccgattcctt tgccgaccaa aatcgagcgt ttcaacattt tgcgttctcc
      181 gcacatgaac aaaacttccc gtgaacaatt ggaaatccgc acccatttgc gcctgatgga
      241 catcgtggat tggaccgata aaactaccga tgcgctgatg aagctggatt tgccggccgg
      301 tgttgatgta gaaatcaaag tccaataatt cggactgtcg aaaatcccca agcaatcaat
      361 gcttggggat tttttatgtt atgccgtctg aaaatatgcg gcggcaaaca gatttaaggc
      421 aaaacaacaa aatcaaaaaa cagtgcggtc ggtgaaatcg gcttattttg tgcctcaaga
      481 attttcagac ggcatttttt agtgaacaaa acaggatatt ttttatccat aactttccta
      541 aggcttgccc cccgaaaaaa ggtagaatcg ggcttggttt gggcagaagc atccatctga
      601 ttctaaggat ggatgatgtt ttattctcaa gtaaataaag gaaagatgat gagcctacta
      661 atgtctttaa ag
//
LOCUS       DAWXHA010000223          666 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.223, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000223 DAWXHA010000000
VERSION     DAWXHA010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.223"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            46..>666
                     /locus_tag="AABD07_002127"
     CDS             46..>666
                     /locus_tag="AABD07_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
                     /protein_id="HFB2356572.1"
                     /translation="MVKTADGYKAIARIRAGESVLSKDEASGKTGYKPVTAQYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSGGKWIKAEDLKAGSRLFAESGKTQTVRNIIV
                     KPTPLKAYNLTVADWHTYFVKGNQAETEGVWVHNACPPRKTPSTPVYGNDSEAYAAAK
                     KLGYRKIKERTRNDAAIFKKGKSYISRDVDSHNGGAWKEASSPKNLN"
BASE COUNT          222 a          163 c          150 g          131 t
ORIGIN      
        1 taagttcttc aaaaatccta cacctgctcc ttccacggca gcaccttggt caaaacggca
       61 gacggctaca aagccattgc ccgtatccga gccggcgaga gcgtcctctc caaggacgag
      121 gcaagcggga aaacaggata caaacccgtt accgcccaat acggtaatcc gtatcaagaa
      181 accgtttaca ttaaagtttc agacggcatc ggcaacagcc aaaccctgat ttccaaccgc
      241 atccatccgt tttattcggg cggcaaatgg attaaagcgg aagatttgaa agcgggaagc
      301 aggctgtttg ccgaaagcgg caaaacccaa accgtccgca acatcattgt caaaccaaca
      361 ccgctcaaag cctacaatct gaccgttgcc gactggcata cctacttcgt caagggtaat
      421 caggcggaaa cggaaggggt ttgggttcat aatgcgtgtc cgccaagaaa aacaccatct
      481 acccccgtat atgggaatga ttcagaagca tatgcagcag caaagaaatt gggatataga
      541 aaaataaaag aaagaacgag aaatgatgct gctattttta aaaaaggaaa gagttatata
      601 tcacgcgatg tagattcaca taatggaggg gcttggaaag aagcatcttc acccaaaaat
      661 ctgaac
//
LOCUS       DAWXHA010000224          664 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.224, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000224 DAWXHA010000000
VERSION     DAWXHA010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.224"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..591
                     /locus_tag="AABD07_002128"
     CDS             <1..591
                     /locus_tag="AABD07_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFB2356573.1"
                     /translation="ITATAQTALAVAEAAGTVWGGKKVELNPAKWDWVKNNGYKKPTA
                     RHMQTKALGTVDEIGNTVQQVGKQTSGQKTSGGNPAIDSDPYSPSSVSARIEAGKVRS
                     DLQIKDILSNTTQRSKTKGPAVQYDKVGDYNDALNDFNSLNVRNVQTRPNGMITGNLP
                     DGRAVNVRNDSSGGEPTLEITISNNRKIKIRYGNTR"
BASE COUNT          238 a          117 c          152 g          157 t
ORIGIN      
        1 ataacagcaa cagcccaaac tgcccttgcc gtagcagagg ctgcaggtac ggtttggggc
       61 ggtaaaaaag tagaacttaa cccggccaaa tgggattggg ttaaaaataa cggttataaa
      121 aaacctactg cccgccatat gcagactaag gcgttaggta cggtagatga aattggcaat
      181 acagtacagc aggttgggaa acagactagc ggacaaaaaa ccagcggtgg taatcctgca
      241 attgatagcg acccctatag cccgagtagt gtgtcagctc gtatagaagc cggtaaggtg
      301 cgcagtgatt tacaaatcaa agacattttg agcaatacta ctcaaaggag taaaacaaaa
      361 ggtcccgctg ttcagtatga taaagtgggg gattacaatg acgcactaaa tgattttaat
      421 agtctgaatg ttcgaaatgt acaaacacgt cctaatggaa tgataacggg caatttacct
      481 gatgggcgtg cggttaatgt tcgtaatgat agcagtggtg gagaaccaac acttgaaata
      541 acaattagta ataaccgaaa aataaaaatc agatatggaa atacacgata aattatgaaa
      601 ttaaaaagct tagatttccc aactggctat ttctattttg ataatgcagc aataaacttt
      661 gata
//
LOCUS       DAWXHA010000225          664 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.225, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000225 DAWXHA010000000
VERSION     DAWXHA010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.225"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            302..>664
                     /locus_tag="AABD07_002129"
     CDS             302..>664
                     /locus_tag="AABD07_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFB2356574.1"
                     /translation="MAGGNRPPKSITSEGKANAATYPKLVNQLNEQNLNNIAAQDPRL
                     SLAIHEGKKNFPIGTATYEEADRLGKIWVGEGARQTSGGGWLSRDGTRQYRPPTEKKS
                     QFATTGIQANFETYTIDSN"
BASE COUNT          228 a          131 c          158 g          147 t
ORIGIN      
        1 gaaaacttta cagggtattc acaatttagg aaatttaagt ccggaagcac aacttgccgc
       61 cgcgagccta ttacaggaca gtgcctttgc ggtaaaagac ggcatcaatt ccgccagaca
      121 atgggctgat gcccatccga acattacagc tactgcccaa actgcccttg ccgtagcaga
      181 ggccgcaggt acggtttggg gaggtaaaaa agtagaactt aacccgacca aatgggattg
      241 ggttaaaaat accggctata aaaaacctgc tgcccgccat atgcagactg tagatgggga
      301 gatggcaggg gggaatagac cgcctaaatc tataacgtcg gaaggaaaag ctaatgctgc
      361 aacctatcct aagttggtta atcagctaaa tgagcaaaac ttaaataaca ttgcggctca
      421 agatccaaga ttgagtctag ctattcatga gggtaaaaaa aattttccaa taggaactgc
      481 aacttatgaa gaggcagata gactaggtaa aatttgggtt ggtgagggtg caagacaaac
      541 tagtggaggc ggatggttaa gtagagatgg cactcgacaa tatcggccac caacagaaaa
      601 aaaatcacaa tttgcaacta caggtattca agcaaatttt gaaacttata ctattgattc
      661 aaat
//
LOCUS       DAWXHA010000226          638 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.226, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000226 DAWXHA010000000
VERSION     DAWXHA010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.226"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          131 a          149 c          208 g          150 t
ORIGIN      
        1 atctcggggt ttcagtcatt tccgatagat tcccgccgcg tcgggggtcc ggattcccgc
       61 ctgcgcggga atgacgaatt tcgagattgc ggtattgtcg ggaatgacgg ttcgggtatt
      121 tccaagcccg ccccgcgcct gtaaacggcg agcgcatcaa aaatgccgtc tgaaggttca
      181 gacggcatcg gtgtcgggga atcagcgggc cgtagcaacc gaaccgtcat tcccacggaa
      241 gtgggaatct aggacgcggg gtttcagtta tttccgatag attcccgccg cgtcaggggt
      301 ccggattccc gcctgcgcgg gaatgacggg tttcgagatt acggtgttgt cgggaatgac
      361 gggttttaag attgcggtgt tgtcggaacg caaccgaacc gtcattccca cggaagtggg
      421 aatctaggac gcggggtttg ggcaactgtt tttatccgat aagtttccgt gcggacaggt
      481 ccggattccc gcctgcgcgg gaatgacggg tttcgagatt acggtattgt cgggaatgat
      541 ggaaaatggc gggaattgtg taaaaaatgc cgtctgaaac cgttggaagc atcgtaaacg
      601 ttggagtcga tgaatcggtg ggcttcagtc cgccattc
//
LOCUS       DAWXHA010000227          635 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.227, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000227 DAWXHA010000000
VERSION     DAWXHA010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.227"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(43..>635)
                     /locus_tag="AABD07_002130"
     CDS             complement(43..>635)
                     /locus_tag="AABD07_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFB2356575.1"
                     /translation="AVFEDDVLFGKDAEKFLAEDTWLEERFDKDSAFVVRLETMFAKV
                     IVRPDKVLNYENRSFPLLESEHCGTAGYIISREAMRFFLDRFAVLPAERIKAVDLMMF
                     TYFFDKEGMPVYQVSPALCTQELHYAKFLSQNSMLGSDLEKDREQGRRHRRSLKAMFD
                     LKRALGKFGREKKKRMESQRQAELEKVYGRRVILFK"
BASE COUNT          180 a          182 c           99 g          174 t
ORIGIN      
        1 gtgtgtccat ttctgatttt aatcccctat attttacaca aactatttga acaatatgac
       61 ccgcctgccg taaactttct caagctccgc ctgcctttga ctctccattc ttttcttctt
      121 ttccctaccg aatttaccca aagcacgctt caagtcaaac atcgccttca acgaacggcg
      181 gtgtcttctt ccttgttccc tatctttttc caaatcgcta cccaacatac tgttttgact
      241 gagaaacttg gcataatgca attcttgggt acataaggcg ggactaacct gataaacagg
      301 catcccctcc ttatcaaaga aataagtaaa catcatcaaa tctaccgctt taatccgctc
      361 tgccggcaaa acggcaaacc tgtccaagaa aaaccgcatc gcctcacgcg aaatgatata
      421 gccagccgtc ccacaatgtt cgctctccag caaaggaaat gaccggtttt cataattcag
      481 gactttatcc ggtctgacaa taactttcgc aaacatcgtt tccaagcgga cgacaaaggc
      541 ggaatcctta tcaaaacgct cttccaacca agtatcttcg gcaaggaact tttctgcgtc
      601 tttgccaaac aggacatcat cctcaaatac ggcaa
//
LOCUS       DAWXHA010000228          588 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.228, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000228 DAWXHA010000000
VERSION     DAWXHA010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.228"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            326..>588
                     /locus_tag="AABD07_002131"
     CDS             326..>588
                     /locus_tag="AABD07_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFB2356576.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAI
                     LLAEGQKSAVTEYYLNHGEWPENNTSAGVASPSDIKGKYVKSVT"
BASE COUNT          198 a          162 c           98 g          130 t
ORIGIN      
        1 aaattcaaaa atctcaaatt ccgacccaat caacacaccc gataccccat gccaataaaa
       61 aagtaacgaa aatcggcact aaaactgaca attttcgaca ctgccgcccc ctacttccgc
      121 aaaccacacc cacctaaaag aaaatacaaa ataaaaacaa ttatatagag ataaacgcat
      181 aaaatttcac ctcaaaacat aaaatcggca cgaatcttgc tttataatac gcagttgtcg
      241 caacaaaaaa ccgatggtta aatacattgc atgatgccga tggcgtaagc ctgaggcatt
      301 tcccctttca attaggagta attttatgaa tacccttcaa aaaggcttta cccttatcga
      361 gctgatgatt gtgatcgcca tcgtcggcat tttggcggca gtcgcccttc ccgcctacca
      421 agactacacc gcccgcgcgc aagtttccga agccatcctt ttggccgaag gtcaaaaatc
      481 agccgttacc gagtattacc tgaatcacgg cgaatggccg gaaaacaaca cttctgccgg
      541 cgtggcatcc ccctccgaca tcaaaggcaa atatgttaaa agcgttac
//
LOCUS       DAWXHA010000229          588 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.229, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000229 DAWXHA010000000
VERSION     DAWXHA010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.229"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..460
                     /locus_tag="AABD07_002132"
     CDS             <1..460
                     /locus_tag="AABD07_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HFB2356577.1"
                     /translation="KYSVSIKKLQNQYNKKTENQENGTFHAASSLGLSAVYDFKLNDK
                     FKPYIGARVAYGHVRHSIDSTKKTTGFLTTAGARGAESAVRPSYKSTQDAHHQSNSIR
                     RVGLGVIAGVGFDITPNLTLDAGYRYHNWGRLENTRFKTHEASLGMRYRF"
BASE COUNT          154 a          188 c          132 g          114 t
ORIGIN      
        1 taaatattcc gtcagcataa aaaagttgca aaaccagtat aacaagaaga cggaaaatca
       61 ggaaaacggt acgttccacg ccgcctcctc gctcggcttg tccgccgttt acgacttcaa
      121 actcaacgac aaattcaaac cctatatcgg tgcgcgcgtc gcctacggac acgtcagaca
      181 cagcatcgat tcgaccaaaa aaacaacagg gtttcttacc accgccggtg ctcgtggcgc
      241 agagtctgcg gttcgtcctt cttacaaaag tacgcaagac gcccatcacc aaagcaacag
      301 catccgccgc gtgggcctcg gtgtcatcgc cggtgtcggt ttcgacatca cgcccaacct
      361 gaccctggac gccggctacc gctaccacaa ctggggacgc ttggaaaaca cccgcttcaa
      421 aacccacgaa gcctcattgg gcatgcgcta ccgcttctga ttccccgaca ccgatgccgt
      481 ctgaaccttc agacggcatt tttaaggcgc aagatcgggc aaacggcatt ttcagacggc
      541 ataactgaca gtataatccg aacatccggc cgctttcgcg cggccttc
//
LOCUS       DAWXHA010000230          580 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.230, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000230 DAWXHA010000000
VERSION     DAWXHA010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.230"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            145..342
                     /locus_tag="AABD07_002133"
                     /pseudo
     CDS             145..342
                     /locus_tag="AABD07_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          198 a           79 c          139 g          164 t
ORIGIN      
        1 tgtgcttcta caaaagggag aaagcgaaga gaatttttca gaaattgtct taaaatcaat
       61 aaaaaataat aaaattttga cagttgaggt acggtcaggc ttgcattttg acttaagaaa
      121 tatttatcgt attgagatgt aataatgcaa ttgatatgtg ccgattggac aggtatagga
      181 aattttatga aaaccttcga aaaaacatgg tctgcacaat atcgggatat ggaaatttca
      241 gtacggaatt tttggaattt gaaacggaca ggggcggaag tctatatcaa cggcaggcgg
      301 gtttatcata acgaagccgg gatggcgtct gcttctttgc gttcgctaat gggggaatac
      361 ctggaatttg aagaaagcgg tacgaaaatt accgttgaaa tcggcagcgc gtggcatttt
      421 aatgaaacta taagaaatat taatacacat ttaagaggta cgaaacttcc aggttctaac
      481 tggagagttc aagataaggg gcattttcat ctttggaaaa gataataaat tctaaggtaa
      541 gggagactaa ttttaatcag gcatggcgtg ttatacgcgc
//
LOCUS       DAWXHA010000231          579 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.231, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000231 DAWXHA010000000
VERSION     DAWXHA010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.231"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            255..>579
                     /locus_tag="AABD07_002134"
     CDS             255..>579
                     /locus_tag="AABD07_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356578.1"
                     /translation="MTKLYAEIAEMEAQDDGTVKVWGYASSEAVDSDGEVIAAAAMKA
                     AIPDYMKFGEVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVEKVKTGVYKGFS
                     IGGSVT"
BASE COUNT          171 a          129 c          161 g          118 t
ORIGIN      
        1 caaaaataaa atagggaggg atgtcatgat atttgaaaaa tcaataaacg gctggaaata
       61 ccgcgccgta atggaaatca gaaccacgca aaaggagctt gccttgaaca gcctttatac
      121 aacagacagg attgaatagt catgacaaaa cctgcgacga gtaactgtca atctttcgat
      181 tccgtcctca tacatcctaa gcgtctttgc aaattctgtt cagttatacc atttatacag
      241 acaagagcaa accaatgacg aagttatacg cagaaatcgc cgagatggag gcgcaggacg
      301 acggcacggt caaagtttgg ggttatgcct caagcgaggc ggtcgattcg gacggcgaag
      361 tcatcgcggc ggcggctatg aaggcggcga ttcccgatta tatgaagttc ggcgaggtgc
      421 gcgagatgca cggcagcaac gcggcgggaa cggcgattga aatcaacgtg gaagacgacg
      481 gcagaacctt tttcggggcg catatcgtcg atcccgttgc agtggagaaa gtcaaaacgg
      541 gcgtttacaa gggcttttcc atcggcggca gcgttaccg
//
LOCUS       DAWXHA010000232          575 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.232, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000232 DAWXHA010000000
VERSION     DAWXHA010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.232"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(1..217)
                     /locus_tag="AABD07_002135"
                     /pseudo
     CDS             complement(1..217)
                     /locus_tag="AABD07_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245501.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
     gene            complement(254..541)
                     /locus_tag="AABD07_002136"
     CDS             complement(254..541)
                     /locus_tag="AABD07_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356579.1"
                     /translation="MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDK
                     VIFYHNEFDEEDGYPVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
BASE COUNT          180 a          115 c           78 g          202 t
ORIGIN      
        1 atatatttaa atgcttacca tccctactag cccatccaag ttgctctctt cctgttttag
       61 acaattgaac atcccattca aattcttgac ctttagttct tgatggacct ttagtccatt
      121 cattaccaaa tttatccaaa tatccattat taggtccttt tggtagcggt gctgaaggag
      181 agtaattttt aggtgggata tatctgattc tacctttcta tatcgctgat tctattcatt
      241 aagctaatta tgcttattcc tcaatcacag tctccaccac cgaatgaata cttttaggca
      301 attgcaaaaa agcattccaa gcaattaaag cagttttaaa agtatgcagc gaacagctta
      361 atactggata accatcttct tcatcaaatt cattgtgata aaaaatgacc ttatcatgat
      421 gaaattctag gcaaaattgt tgaccaccgc catcatcata aatttcattt ggattatttt
      481 ctattaattc tataatcttg aaatgctcat caatcgtgga tcgatagtaa atatcgctca
      541 ttaaggtaga cgtaatgtaa tcatatattc ctaca
//
LOCUS       DAWXHA010000233          565 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.233, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000233 DAWXHA010000000
VERSION     DAWXHA010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.233"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..143
                     /locus_tag="AABD07_002137"
     CDS             <1..143
                     /locus_tag="AABD07_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HFB2356580.1"
                     /translation="GLDGARLTVSKGSEVKNEILKFYEILMQFNPELLGGKLPDNGFF
                     LA"
BASE COUNT          163 a           92 c          161 g          149 t
ORIGIN      
        1 tgggcttgga cggcgcacgg ctgacggtaa gcaaaggcag cgaagtgaaa aacgagattt
       61 tgaagtttta cgaaatcctg atgcagttca acccggaact tttgggcggc aagctgccgg
      121 ataacgggtt cttcttggct taaagggaaa gaggccgtct gaaaagggta gggtggttgt
      181 gaatacctga tttatcattt ttcagacggc ctattaaggc attgtcagcg gcgtgggtcg
      241 gattcttgaa tccgacattt cggctaaacg gggctgtcgg atacaagtat ccgacctact
      301 cttttcagac ggcctatcag ataatagttc gaacagtaca caaagagccg tcggattgcc
      361 tgaaatgttg ggtcatgacc caacctacgc ttactgggga aacgggatcg aagtgtgagg
      421 tatgtggcgg ggttgtttaa taatgaaatt ttataactat ttgatagggt ggtaatgcta
      481 tgaatgaaga taaatatagg gaaaatatga catgggatga aattgaaaat gtagtaggaa
      541 ctttagtttc tgaagaaaga atgct
//
LOCUS       DAWXHA010000234          550 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.234, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000234 DAWXHA010000000
VERSION     DAWXHA010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.234"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          144 a          141 c          124 g          141 t
ORIGIN      
        1 ctaaggcggg ccaacgccgt accggttttt gttaatccac tatacttata ccgttatgcc
       61 cgcgtccgga atttcagatt gcggacattt gtcaggaaaa acaaaaaacc ttccgccgct
      121 gcgcaggcga aaatcctatc cgttggaatc cggttgtttt aaataaatcc ttgcagcttt
      181 ggttttctgt ttttccgata acaccgtaac tttgaaacgc gtgaagcggg aatccgatcc
      241 gttgggattt tgcaacttca aatcaatccg caaaccggaa tcccgtcatt cccgcgaaag
      301 cgggaatcta gaacgcatcc gcacggaaac ccgcatcccg tcattcccac ggaagtggga
      361 atctagaatg tcaaatctca agaaaccgtt ttatccgata agttcctatg ccgacggacc
      421 tggattcccg cctgcgcggg aatgacggag gggaacggcg cacggacatt tgccggaatc
      481 ttttatgttt ccattatcat actcttttcg atgcgctatt ccaagaaaaa gaaaatagct
      541 tgtgcaggct
//
LOCUS       DAWXHA010000235          549 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.235, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000235 DAWXHA010000000
VERSION     DAWXHA010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.235"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..438)
                     /locus_tag="AABD07_002138"
     CDS             complement(<1..438)
                     /locus_tag="AABD07_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HFB2356581.1"
                     /translation="MFLILGRNFLKIILCFSFFVPKFALALVNVPGKFDRVEVYDDGR
                     YLGIRGSDDKRRRIWKGVFDRESGRYLTSEAQHLTVRHVSTGASSPGKVSTVVSSSVS
                     RAGVLSGVGKLVRQGAKFGTRAVPYVGTTLLAHDVYQTFKEDIQ"
BASE COUNT          183 a          117 c           87 g          162 t
ORIGIN      
        1 ctgtatgtct tctttgaaag tttggtatac gtcgtgggct aaaagggttg ttccgacata
       61 gggaaccgcc cttgtgccga atttcgcgcc ttggcggaca agtttgccga cccccgacaa
      121 tacgccggcg cgggatactg atgaagatac aaccgtacta actttaccag gacttgatgc
      181 cccagtagat acatgcctaa ctgttaaatg ttgagcttct gaagttaaat atcttcccga
      241 ttctctatca aatacacctt tccaaattct tcttcttttg tcatctgaac ctcgaatacc
      301 taaatatctg ccatcatcat aaacttcaac cctatcaaat ttacccggaa catttactaa
      361 tgccaatgca aatttaggta caaaaaaact aaagcatagg ataatcttta aaaaatttcg
      421 ccctaggata agaaacataa cattttgctt catctaattt aattaataat gtagaagaat
      481 cagggaattg aatttctata aaatctctat cataacgatg aaagaaattc ctaaaaatat
      541 caaatgaaa
//
LOCUS       DAWXHA010000236          534 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.236, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000236 DAWXHA010000000
VERSION     DAWXHA010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.236"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(1..534)
                     /locus_tag="AABD07_002139"
                     /pseudo
     CDS             complement(1..534)
                     /locus_tag="AABD07_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869119.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
BASE COUNT          148 a           91 c          103 g          192 t
ORIGIN      
        1 tagtctatgc gatgtatgtg ccattttgtt acctgatggc tctgacattt ttacagcaat
       61 gcagtttata aaattttctc ttgtaaaaat ttcatctaat aaaactttta aataagcctg
      121 ttccttatca tcgcattgaa caaagattag cccatcatct tttaataact ctttcgcaat
      181 ttccaagcga tttttcataa atgttagcca agtggaatgt gaaaatttat cgttatatgc
      241 aaagctatcg gtttctgtat tatacggtgg atcaatataa atcaacttta ctttgccttt
      301 aaactgcttg gcaagcgaat gcagggcaat cagattattg cctttgataa tgagattttc
      361 ggctggcgta ccgtctgaac ggcgtttgat ttcgccaacg ggttgcttgc cgtctgcggt
      421 gtggcgggag aattttgaga atgcttttgc gtcaaaaagc cggtcaattt catcaaaagc
      481 aagcgtttga ttaaaaaaga tttattgtct ttttctggtt aatttggtgt ataa
//
LOCUS       DAWXHA010000237          513 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.237, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000237 DAWXHA010000000
VERSION     DAWXHA010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.237"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..444
                     /locus_tag="AABD07_002140"
     CDS             <1..444
                     /locus_tag="AABD07_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFB2356582.1"
                     /translation="GDFSISYKNFSTVKPKVIAKGTINGKTFRDVNQSAKIGSPDSPT
                     LIAQRVNAKIQADGKPRPNATVANSHAEIGVIQQAYNAGETKGASMTMTVSGKDVCGY
                     CKGDIAAAAQASGLKSLTVNATDNVTGKNKTYYWTPGMKSIKERK"
BASE COUNT          183 a           85 c          105 g          140 t
ORIGIN      
        1 ggggattttt cgattagcta taaaaacttt tctactgtca aaccaaaagt aattgccaaa
       61 ggaacgatta atggaaagac ttttagagat gttaatcaaa gtgcaaaaat tggatcgcct
      121 gattcaccta cattaatagc ccaacgagtt aatgcaaaaa tccaagccga cggtaaacct
      181 cgtccgaatg caaccgttgc taattcacat gctgaaattg gtgttatcca gcaggcttat
      241 aatgcaggtg aaacgaaagg ggcatctatg acaatgacag tttcaggaaa agatgtttgc
      301 ggttattgta aaggagatat tgcagctgct gctcaagctt ctggactgaa atcactgact
      361 gttaatgcga cagataatgt aacaggaaaa aataaaactt actattggac gcctggtatg
      421 aaatcaatta aggagagaaa atgaaaacat caacaattgt ttttggtgga ttttttatta
      481 cagataatgg agaacgaatc caaatcccta ttt
//
LOCUS       DAWXHA010000238          511 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.238, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000238 DAWXHA010000000
VERSION     DAWXHA010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.238"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          178 a           86 c           88 g          159 t
ORIGIN      
        1 tcagctatat cacaaatatc ctcatgtatt aaccttacaa attaaaaata ttgaaactga
       61 aaaaatatct ttaaatgtaa acatttgtag attaacgtta tgcccatcat ttcatgatga
      121 acatgatacg cttgtttgtt cagtgcaaga tttttatgta aatactgttt aactagcaag
      181 cgcaggctgg attaaaacct aaatcattga taaaaaacat aaaacaagca ttctgaaatt
      241 tttcaggctg cttttttgtt gggtttggta acccaatcta ctcgctgaaa attagcagag
      301 gacgtaaatg gctatttatg atttaaacga aatcgtaacc cgtgctgcat taggtatata
      361 taaaggaaaa tggcgaaaca tggattttga gcaagttcta caaaacattg ttcagcaacc
      421 gtaggtcgga ttctcgaatc cgacattttt caacagcggc atttcggaaa cgatagacgc
      481 gtcaaatatt tttgtcggat acaagtatcc a
//
LOCUS       DAWXHA010000239          510 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.239, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000239 DAWXHA010000000
VERSION     DAWXHA010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.239"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(92..>510)
                     /gene="mafB"
                     /locus_tag="AABD07_002141"
     CDS             complement(92..>510)
                     /gene="mafB"
                     /locus_tag="AABD07_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFB2356583.1"
                     /translation="GKKVELNPAKWDWVKNTGYKKPAARHMQTVDGEMAGGNKPLESK
                     NTVTTNNFFENTGYTEKVLRQASNGDYHGFPQSVDAFSENGTVIQIVGGDNIVRHKLY
                     IPGSYKGKDGNFEYIREADGKINHRLFVPNQQLPEK"
BASE COUNT          136 a          109 c           70 g          195 t
ORIGIN      
        1 atgcggcttc tctaattcca attcctatca aagattcccc ttgtctcgaa taaatttcaa
       61 aaatttcatt taacatatta atctctatct actatttttc aggaagttgt tggttaggga
      121 caaataatct atgattaatt tttccatctg cttctctgat atattcaaaa tttccatctt
      181 ttcctttata agatccaggg atataaagtt tatgccttac aatattatct ccgccaacta
      241 tttgtattac tgttccattt tcagaaaaag catctactga ttgcggaaaa ccatgataat
      301 caccattcga tgcttgcctt aatactttct ctgtataacc ggtattttca aaaaaattat
      361 tcgttgttac agtatttttt gattccagcg gtttattccc accggccatt tccccgtcta
      421 cagtctgcat atggcgggca gcaggttttt tatagccggt atttttaacc caatcccatt
      481 tggccgggtt aagttctact tttttaccgc
//
LOCUS       DAWXHA010000240          506 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.240, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000240 DAWXHA010000000
VERSION     DAWXHA010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.240"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          148 a           93 c          118 g          147 t
ORIGIN      
        1 attttaggtt tctgattttg gttttctgtt tttgtaggaa tgatgaaatt ttgagtttta
       61 ggaatttatc ggaaaaaaca gaaaccgctc cgccgtcatt cccgcgcagg cgggaatcta
      121 gacattcaat gctaaggcaa tttatcggga atgactgaaa ctcaaaaaac cggattccca
      181 ctttcgtggg aatgatggga ttagagtttc aaaatttatt ctaaatagct gaaactcaac
      241 gcactggatt cccgcctgcg cgggaatgac gaagtggaag ttacccgaaa cttaaaacaa
      301 gcgaaaccga acgaaccgga ttcccacttt cgtgggaatg acggaatttt aggtttctgt
      361 ttttgtagga atgatgaaat tttgagtttt aggaatttat cggaaaaaac agaaaccgct
      421 ccgccgtcat tcccgcgtag gcgggaatct agagctgtcg gtacggaaac ttatcaggta
      481 aaacggtttc tttagatttt acgttc
//
LOCUS       DAWXHA010000241          488 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.241, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000241 DAWXHA010000000
VERSION     DAWXHA010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.241"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          149 a           96 c           85 g          158 t
ORIGIN      
        1 taattttatt aaaatgtttt cataattttc taggttcatt tctagctcaa tttaaaatga
       61 tttcattgtt gccgtaccaa tgcgaaattt accatcgaca aaatttccct tcactgatac
      121 aggtacccca tcgcagagat gtaggtcgga tatttgtatc cgacaaaaat atttgacgcg
      181 tttatcgttt ccgaaatgcc gctgttagaa aatgtcggat tcgagaatcc aacctacggc
      241 tatatccgta aagtctgacc attgttcaat gcggaaggcg cgaatattgc ggacggaatg
      301 tagaaaccaa tatacttaat tgccatgcca ttctcatcaa aatacctgtg ctgtttaaag
      361 tgcgtggttc attacacgag taattttatt ttcaggctgc ctgaaagaaa gataggcaac
      421 ttattactca tcttacgcta gctctcaata attgaatacg ttgcactaga accaattatt
      481 tctatgaa
//
LOCUS       DAWXHA010000242          447 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.242, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000242 DAWXHA010000000
VERSION     DAWXHA010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.242"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..102
                     /locus_tag="AABD07_002142"
     CDS             <1..102
                     /locus_tag="AABD07_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFB2356584.1"
                     /translation="RKPFPPFLKGWEFRLNFGTPSRQLKILRDRCGI"
     gene            complement(122..381)
                     /locus_tag="AABD07_002143"
                     /pseudo
     CDS             complement(122..381)
                     /locus_tag="AABD07_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711407.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          127 a          118 c           77 g          125 t
ORIGIN      
        1 cgcaaacctt tcccgccgtt cttgaaagga tgggaatttc gacttaactt cggcacaccg
       61 tcccggcagc taaaaatcct gcgggatcgg tgtggaattt agggataatc tagtacagcc
      121 cctatttatt ttgtgcctta ctttcagtac caattgccac cgcacttaaa tttgttgcct
      181 gagaagatgt ccccactgca attcctttcg taccactggc agcactgctt ttccctaagg
      241 aaataccaaa attcgatgca ttagcagaag tacccaatgc cactcaattt tagatgccga
      301 tgctttatcg ttccatgata aggagccatt attaccttct tgcaaagtag aatccgcccc
      361 ataagaagac aaagcactca ttaacaaaat accagccgct atcgcggacg acctatatac
      421 ataacattac ttcatatcat ttcattc
//
LOCUS       DAWXHA010000243          440 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.243, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000243 DAWXHA010000000
VERSION     DAWXHA010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.243"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(65..337)
                     /locus_tag="AABD07_002144"
     CDS             complement(65..337)
                     /locus_tag="AABD07_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356585.1"
                     /translation="MKKTSKYLIYTAAFTSFCFAFQENRSEAKQPDITLSASLCEQFN
                     MLNAKDMDTEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGVVYE"
BASE COUNT          118 a           71 c           97 g          154 t
ORIGIN      
        1 atatttgatt taatacattt ggctccaatg cattcaagca taatgtttca aatggcaggc
       61 aggtttattc atagacgacg ccggcgagca tttcctgttc gttcaagttg ccgtactctt
      121 tttcccagtc gtgtgaagac tcgatgatgt cgcattcttt ggaaagggag acttgttctg
      181 tatccatatc tttggcgttc agcatgttga attgttcgca cagggatgcg gataaagtga
      241 tgtcgggctg tttggcttca gaacggtttt cttggaaggc aaagcagaat gaggtaaatg
      301 ccgcagtata gataagatat ttgctggttt tcttcatttt tctatccttt ttctgtcaat
      361 tcgggattaa acctatggaa aatctgaaaa attatgtatt ggataagaaa aatcataatt
      421 taaatttagt ttatcatagt
//
LOCUS       DAWXHA010000244          429 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.244, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000244 DAWXHA010000000
VERSION     DAWXHA010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.244"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          114 a          110 c           98 g          107 t
ORIGIN      
        1 ccgcgcgcaa gtttccgaag ccatcctttt ggccgaaggt caaaaaaagg tcaaaaatca
       61 gccgttgccg ggtattgccc gaatcacggc atatggccgg aaaacttcgt cattcccgcg
      121 aaagcgggaa tccagtccgt tcagtttcgg tcatttccga taaattcctg ttgcttttca
      181 tttctagatt cccgcctgcg cgggaatgac ggcggagcgg tttccgttgc tcccgataaa
      241 ttcctaaaac ttaaaatttc atcattccta caaggacaga aaaccaaaaa cagaaaccta
      301 aaattcgtca ttcccgcaaa agcgggaatc tagccttgtc ggcacggaaa cttatcgggt
      361 aaaaaggttt ctccggtcct gagtcctgga ttcccacttt cgtgggaatg acgggattta
      421 atgatgccg
//
LOCUS       DAWXHA010000245          409 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.245, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000245 DAWXHA010000000
VERSION     DAWXHA010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.245"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            84..>409
                     /locus_tag="AABD07_002145"
     CDS             84..>409
                     /locus_tag="AABD07_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356586.1"
                     /translation="MRTIFFSGSRSISRLNPQIRERINNILSNNFDIVIGDANGADKA
                     IQEFLQEQDYANVHIYFSGKIYRNNVGNWQFVQVDSKGTGRVFYTAKDKKMAEIADYG
                     FILWDG"
BASE COUNT          150 a           53 c           79 g          127 t
ORIGIN      
        1 ttggaaatat caactgaaaa attgttttca aaaaatgcta gatctgtaat tgttttagca
       61 atgacaaaga ctagaggata aaaatgcgca ctattttctt ttctggttca cgcagcattt
      121 cacgactaaa tccacaaata cgagaaagaa ttaacaatat tcttagcaat aattttgata
      181 ttgttattgg agatgctaat ggggctgata aagctatcca agaatttcta caagaacaag
      241 attatgctaa tgtgcatatt tacttttctg gcaaaattta ccgaaataat gtgggaaatt
      301 ggcagtttgt ccaagtagac agcaaaggaa ctggaagggt attttataca gcaaaagata
      361 agaaaatggc agaaattgct gattatggct ttattttatg ggatggtaa
//
LOCUS       DAWXHA010000246          399 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.246, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000246 DAWXHA010000000
VERSION     DAWXHA010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.246"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT          142 a          101 c           56 g          100 t
ORIGIN      
        1 agataaagaa acggcaacac acgccaacag aaaaacatat ttgaacttca tcatattttc
       61 cacataaaag gcagcctgaa aatctttcag gctgcccttg tcaaattatt cctagctttc
      121 ggcttttttg gcaaaccaaa caatccgatt acccgcataa tactttccat ttattgaaat
      181 ccgacaagcc gcgcccaaaa aatgccatgc actgccgatt tccgcagcaa tctttgtacc
      241 gttttcttca aattccaaat attcacccaa taataaactt gaaacagaac acgcgggcag
      301 caagtgccca ccctacgctt attcaaataa tttgattaaa taaagaataa agaaaaggca
      361 tcaggaacaa aattataatc tgccacttga ctcgcaccg
//
LOCUS       DAWXHA010000247          386 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.248, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000247 DAWXHA010000000
VERSION     DAWXHA010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.248"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            4..>386
                     /locus_tag="AABD07_002146"
     CDS             4..>386
                     /locus_tag="AABD07_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356587.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENSRAALAAPVYIQTGATSFIPIPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNGKTRNKRMSDIS"
BASE COUNT          107 a          122 c           83 g           74 t
ORIGIN      
        1 aatatgaaac gcatcttttt gcccgccttg cccgccatcc tgcctttatc cgcttatgcc
       61 gacctgccct tgacgattga agacataatg accgacaagg gaaaatggaa actggaaact
      121 tcccttacct acctgaatag cgaaaacagc cgcgccgcac ttgccgcacc ggtttacatt
      181 caaaccggcg caacctcgtt tatccccatt ccgaccgaaa ttcaagaaaa cggcagcaat
      241 accgatatgc tcgccggcac gctcggtttg cgctacggac tgaccggcaa taccgacatt
      301 tacggcagcg gcagctatct gtggcacgaa gaacgcaaac tcgacggcaa cggcaaaacc
      361 cgcaacaaac ggatgtccga catatc
//
LOCUS       DAWXHA010000248          381 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.249, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000248 DAWXHA010000000
VERSION     DAWXHA010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.249"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..>381
                     /locus_tag="AABD07_002147"
     CDS             <1..>381
                     /locus_tag="AABD07_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Opacity protein opA54"
                     /protein_id="HFB2356588.1"
                     /translation="ESNSSTKKVTEDIKDNYRETKTEHQGNGSFHAASSLGLSAVYDF
                     KLNDKFKPYIGARVAYGHVRHQVNSVDKETITLISKPKGMSPGGGRVVSNLPSKPAYY
                     QSNSISSLGFGAVAGVGIDITPNLT"
BASE COUNT          120 a          104 c           76 g           81 t
ORIGIN      
        1 gaaagtaatt cttctactaa aaaagttact gaagatataa aagacaacta ccgagaaacc
       61 aaaacagaac atcaaggaaa cggcagcttc cacgccgctt cttctctcgg cttatccgcc
      121 gtttacgatt tcaaactcaa cgataaattc aaaccctata tcggtgcgcg cgtcgcctac
      181 ggacacgtta gacatcaagt taattcggtc gacaaagaaa ctattactct tatctctaaa
      241 ccaaagggaa tgtctccagg gggaggtcgt gtcgtatcaa acctgcccag caaacctgcc
      301 tattaccaaa gcaacagcat cagcagcttg ggcttcggcg cagtggcagg cgtaggcatc
      361 gacatcacgc ccaacctgac c
//
LOCUS       DAWXHA010000249          380 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.250, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000249 DAWXHA010000000
VERSION     DAWXHA010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.250"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..114
                     /locus_tag="AABD07_002148"
     CDS             <1..114
                     /locus_tag="AABD07_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFB2356589.1"
                     /translation="FWPSKLIGGKPVPSSPAEGRYRLTAAAATGAQGAGEA"
BASE COUNT           89 a          101 c          118 g           72 t
ORIGIN      
        1 ttctggccgt ccaagctgat tggcggcaaa cctgtgcctt cgtcccccgc cgaagggcgt
       61 taccggttga ctgccgccgc cgccaccggc gcgcaaggcg cgggagaggc gtaatgatga
      121 atcctaccga gtttctgaaa gcgcgtatcg ccgaatggga agccaaaagc aaagaggcgg
      181 gcggaaacgc cgattttaaa gcttttgagt ttgccgaaag cgaaatcaaa aactacaaag
      241 cgatgttgaa aacttatgaa cggcctgatt aaaaacccga agctgattgc ggtgtcggtt
      301 tgcgccgtgt tcgttgccgg cgcgtggcaa tacgaccgcg ccgcgcaata ccggcgcgga
      361 tacggtgcgg ctatgctgga
//
LOCUS       DAWXHA010000250          357 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.251, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000250 DAWXHA010000000
VERSION     DAWXHA010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.251"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            181..>357
                     /locus_tag="AABD07_002149"
     CDS             181..>357
                     /locus_tag="AABD07_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFB2356590.1"
                     /translation="MTELPWIAEARRHIGLKEIPGAKHNPTIVQWLKETGGFPGAAKS
                     WYFEDETPWCGLFVG"
BASE COUNT          100 a           77 c           97 g           83 t
ORIGIN      
        1 gttttttatt ttgtgttgac gggcaacata tcatctgcgc ggaaagttac cgtatcggca
       61 aacgcgactg aaaaagacag cgtgttcggc gatgcggtgc acattgtgat tgcgacttaa
      121 aacatagaac gagttgccaa cccaaagttt acatctcgtc ttttaccgaa aggattaaaa
      181 atgacagaat taccgtggat agccgaagcg agaaggcaca tcggtttgaa agaaattccc
      241 ggcgcgaaac acaatccgac gattgtgcaa tggctcaaag agacgggcgg cttccccggc
      301 gcggcaaagt cttggtattt tgaagacgaa acgccgtggt gcggcctgtt tgtcgga
//
LOCUS       DAWXHA010000251          346 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.252, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000251 DAWXHA010000000
VERSION     DAWXHA010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.252"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..185
                     /locus_tag="AABD07_002150"
     CDS             <1..185
                     /locus_tag="AABD07_002150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356591.1"
                     /translation="SGELIGFEFNNADNTVTGNADITVKPADPSQHSRPKGLIIRSDR
                     NEPNKNQEVRLNNIAD"
BASE COUNT          113 a           79 c           76 g           78 t
ORIGIN      
        1 attccggcga actcatcggt tttgagttta ataatgcgga caataccgta accggcaatg
       61 cggatattac ggtcaaacct gccgaccctt cacagcattc gcgcccgaaa gggctgatta
      121 tccggagcga ccgtaacgaa ccaaacaaaa accaagaagt tcgcttaaat aatatagcgg
      181 attaacaaaa atcaggacaa ggcggcgagc cgcagacagt acaaatagta cggcaaggcg
      241 aggcaacgcc gtaccggttt aaatttaatc cactctatat ggctggtgga gtttatttag
      301 gcggaaaaat tattagccct atatatcatt catcacaaga attttc
//
LOCUS       DAWXHA010000252          339 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.253, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000252 DAWXHA010000000
VERSION     DAWXHA010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.253"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT           95 a           78 c           64 g          102 t
ORIGIN      
        1 atatagtgaa ttaacaaaaa ccggtacggc gttgccccgc cccggctcaa agggaacgat
       61 tccctaaggt gctgaagcac cgagtgaatc ggttccgtac tatctgtact gtctgcggct
      121 tcgtcgcctt gtcctgattt ttgttaatct actagagttt aaacaacttt atttttgatt
      181 ttatcccaag tataaacctg acaatcgtat ttaaaagccg gatatacgcc tagcttgttc
      241 actggtatgt atgatttaga ctaaaaagaa atcaatcatt tgctcaattt taagcgtctc
      301 cccgacaggt tcccctgtct caggatcaaa ctcaagaaa
//
LOCUS       DAWXHA010000253          333 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.254, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000253 DAWXHA010000000
VERSION     DAWXHA010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.254"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..>333
                     /locus_tag="AABD07_002151"
     CDS             <1..>333
                     /locus_tag="AABD07_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFB2356592.1"
                     /translation="DYVFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINP
                     DNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNS
                     VLIRSHNSG"
BASE COUNT           90 a          104 c           88 g           51 t
ORIGIN      
        1 gattatgttt tcgtccccta cctcaaagag agctgcttca aaggcggggc gggcgcgtat
       61 gaaatccccg actacaacgg ctaccgcctg ccgttcggca aatcaacgtt aaggcgcaaa
      121 ggcatcaacc ccgacaacgt cttctgctgc accctgaccg gcgacagcat ggaggaaaaa
      181 atcgcagaag acgcggcaat cgccgtagat acgggcgaaa ccgccatacg ggacggcaaa
      241 atatacgcct tcgcccaaga cggcatgttc cgcgtcaaat acctgatacg gcagcccggc
      301 aacagcgtgc tgatacgcag ccacaacagc ggc
//
LOCUS       DAWXHA010000254          315 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.255, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000254 DAWXHA010000000
VERSION     DAWXHA010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.255"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..>315
                     /locus_tag="AABD07_002152"
     CDS             <1..>315
                     /locus_tag="AABD07_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HFB2356593.1"
                     /translation="VAATFGRDAQGNTTADVQVIPRPDLTPASAQAPHAQPPPEVSPA
                     ENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKER
                     KEG"
BASE COUNT           84 a          124 c           79 g           28 t
ORIGIN      
        1 gttgccgcaa cattcggcag ggacgcgcaa ggcaacacca cggcggatgt acaagtaatc
       61 ccgcgtcccg acctcacgcc cgcaagcgcg caagcacctc acgcacagcc gccgcccgaa
      121 gtatcgcccg ccgaaaaccc cgcaaacaac ccggaccccg atgagaaccc cggcacgcgt
      181 cccaatcccg aacccgaccc cgatttgaat cccgatgcaa atcccgatac ggacggacag
      241 cccggaacaa gccccgattc cccggccgtt ccggaccgcc caaacggcag gcatcgcaaa
      301 gaaaggaaag aaggc
//
LOCUS       DAWXHA010000255          261 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.256, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000255 DAWXHA010000000
VERSION     DAWXHA010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.256"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            complement(<1..>261)
                     /locus_tag="AABD07_002153"
     CDS             complement(<1..>261)
                     /locus_tag="AABD07_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HFB2356594.1"
                     /translation="TYGCYGVDSSIMRLMPDRSRFPEVQQLMESQMERIARPFWDKRK
                     EEIPKDTALKWRLFPFSHCEFFWNGGGCFVRNGDNLIHRVYF"
BASE COUNT           85 a           60 c           47 g           69 t
ORIGIN      
        1 ttaaaataaa ctcgatgaat taaattatca ccgttacgta caaaacaacc gccgccgttc
       61 caaaaaaatt cacaatgact aaaaggaaaa agacgccact ttaaagcagt atctttagga
      121 atttcttctt tccgtttatc ccaaaaagga cgagcaatcc tttccatttg actttccatc
      181 agttgttgga cttcggggaa tctgctgcga tcgggcataa ggcgcataat cgaactgtca
      241 acgccgtagc agccataggt t
//
LOCUS       DAWXHA010000256          255 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.257, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000256 DAWXHA010000000
VERSION     DAWXHA010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.257"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..195
                     /locus_tag="AABD07_002154"
     CDS             <1..195
                     /locus_tag="AABD07_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356595.1"
                     /translation="AAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYR
                     NACFDADGVRELNAAVDDGG"
BASE COUNT           61 a           76 c           78 g           40 t
ORIGIN      
        1 gccgcggtcg aacacgccga acacgcccgc aaatcgtccg ccgcgtatca ggcgcaaaag
       61 gcggcgcgtg aggaaaaaga aagggtgcgc tatgtgcaaa cgcttaaaat cattgaaaaa
      121 cctgtgtacc gcaatgcctg ttttgatgct gacggcgtgc gcgaactcaa cgccgccgtt
      181 gacgacggcg gttaagccgc ccgccgattt ggtgcggccc tgcccgaaac tgccgcacct
      241 tgaagggaac acggg
//
LOCUS       DAWXHA010000257          252 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.258, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000257 DAWXHA010000000
VERSION     DAWXHA010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.258"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT           59 a           57 c           62 g           74 t
ORIGIN      
        1 tgcgcgggaa tgacggcgga gagggtttgt tgtttcgggt aaatccctgt agtttttcgt
       61 ttccagattc ccgctttcgc ggggatgacg gcggtgggat ttctgttttt ccgacaaatt
      121 cctaaaactt aaaattccgt tattcccgcg aaaacagaaa accaaaaaca gaaacctaaa
      181 attcgtcatt cccgcgcagg cgggaatcca gtccgttcgg tttcgcttgt tttaagtttc
      241 gggtaacttc ca
//
LOCUS       DAWXHA010000258          252 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.259, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000258 DAWXHA010000000
VERSION     DAWXHA010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.259"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT           88 a           42 c           49 g           73 t
ORIGIN      
        1 ttttttggac agtattgatg tatgctcttg tgaaaagatt atctaaaaag ccaagctgaa
       61 acccagtaca caacacatca ataaagattc cttttgcacg gaacaatgac aatattcaaa
      121 ttgctggatt tgcaatctga tttacctatt gaaattgggt gtgcaacata cgttctaagc
      181 aggctttgat ttcccaaaga ggctgaaggg taagagacgc ttatatcata gataaataat
      241 ggcaaaacag gt
//
LOCUS       DAWXHA010000259          243 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.260, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000259 DAWXHA010000000
VERSION     DAWXHA010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.260"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            3..>243
                     /locus_tag="AABD07_002155"
     CDS             3..>243
                     /locus_tag="AABD07_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFB2356596.1"
                     /translation="MLLKMLIVRIILATGLTFVTYAGYLAALEKFKGYTANAINSMPS
                     DILNLLLISGFGQGLGCLFGAFSFFIGMHAFKKLTF"
BASE COUNT           58 a           59 c           54 g           72 t
ORIGIN      
        1 gcatacttct gaaaatgctg attgtcagaa tcatccttgc aacaggtctg acattcgtaa
       61 cctatgccgg gtatctcgcc gcactggaaa agttcaaagg ctacacggca aatgcgatca
      121 attccatgcc ttccgacata ttgaaccttc ttttaatttc gggattcggt caggggttgg
      181 gctgcctgtt cggcgcattc tcgttcttca ttggtatgca cgcattcaaa aaactgacgt
      241 ttg
//
LOCUS       DAWXHA010000260          242 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.261, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000260 DAWXHA010000000
VERSION     DAWXHA010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.261"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..114
                     /locus_tag="AABD07_002156"
     CDS             <1..114
                     /locus_tag="AABD07_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFB2356597.1"
                     /translation="FWPSKLIGGKPVPSSPAEGRYRLTAAAATAKQGAGEA"
BASE COUNT           39 a           69 c           82 g           52 t
ORIGIN      
        1 ttctggccgt ccaagctgat tggcggcaaa cctgtgcctt cgtcccccgc cgaagggcgt
       61 taccggttga ctgccgccgc cgccacggcg aaacagggcg cgggcgaggc gtaaatgatt
      121 ggggctttgc tgaaaaattg gaagccgctg cttattttgt ccgcaatcgc gttcttcgcc
      181 gtttcttggc agctggacag ggcggcgcaa taccgtcgcg gatacggtgc ggcggtgtcg
      241 ga
//
LOCUS       DAWXHA010000261          232 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.262, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000261 DAWXHA010000000
VERSION     DAWXHA010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.262"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..>232
                     /locus_tag="AABD07_002157"
     CDS             <1..>232
                     /locus_tag="AABD07_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFB2356598.1"
                     /translation="GFCYPEKYVRISNDTSLIPYIQPHNFHWWFENYGTEGAEVAYIF
                     KNSILPDLNLIPFASNGEWEAYFDGNDVTGNPR"
BASE COUNT           72 a           35 c           46 g           79 t
ORIGIN      
        1 agggttttgt tatcctgaaa agtatgttcg tatctctaac gatacatctt taatacctta
       61 tattcagcca cataattttc actggtggtt tgagaattat ggaacagaag gggcagaagt
      121 agcttatata tttaaaaatt ccatcctgcc tgatttaaat cttatcccat tcgctagtaa
      181 tggagaatgg gaagcttatt ttgatggtaa tgatgtaaca ggaaatccta gg
//
LOCUS       DAWXHA010000262          230 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.263, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000262 DAWXHA010000000
VERSION     DAWXHA010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.263"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
     gene            <1..>230
                     /locus_tag="AABD07_002158"
     CDS             <1..>230
                     /locus_tag="AABD07_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HFB2356599.1"
                     /translation="INKIKTDNFSQIYKALAELTLPISAMDVRKFQSIAKEIYTGGNI
                     KVSFTEDMDNLNNSDKVVAIGSTKTISYNFQT"
BASE COUNT           92 a           38 c           33 g           67 t
ORIGIN      
        1 tattaataaa atcaaaacag ataacttctc acaaatttat aaagctcttg cagaactaac
       61 actaccaatc tcagctatgg atgtacgtaa atttcaatct atagcaaagg agatttatac
      121 tggcggtaac attaaagtta gctttacgga agatatggac aatttaaata atagcgataa
      181 agtggttgct attggttcaa ctaaaactat cagctacaac tttcaaacaa
//
LOCUS       DAWXHA010000263          222 bp    DNA     linear   BCT 17-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae strain 225
            SAMEA104313221-rid9717973.denovo.264, whole genome shotgun
            sequence.
ACCESSION   DAWXHA010000263 DAWXHA010000000
VERSION     DAWXHA010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA104313221
            Sequence Read Archive: ERR2133916
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 13-APR-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000721787.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000721787.1
            Genome Coverage       :: 190x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/13/2020 20:09:30
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 2,158
            CDSs (total)                      :: 2,107
            Genes (coding)                    :: 1,962
            CDSs (with protein)               :: 1,962
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 91 of 145
            Pseudo Genes (incomplete)         :: 48 of 145
            Pseudo Genes (internal stop)      :: 42 of 145
            Pseudo Genes (multiple problems)  :: 34 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA104313221-rid9717973.denovo.264"
                     /strain="225"
                     /isolation_source="Pharyngeal"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Australia"
                     /collection_date="2008"
BASE COUNT           58 a           55 c           66 g           43 t
ORIGIN      
        1 acgtaaaatc tcaagaaacc gttgtacccg ataagtttcc gtgccgacaa gtccggattc
       61 ccgcctgcgc gggaatgacg gttcagttgc gtaggactgg attgtgaaaa ggggcggatt
      121 cggtgaaaac ggcggaaatg cgggattgat ggaatcggcg ggctgaagcc ctccctacgc
      181 aacaccctgc ggcgtactca aatcaacacg gaaacttatg cg
//
